mosflm Help Routines

TESTGEN

usage: The TESTGEN option will calculate the maximum allowed oscillation

angles as a function of the phi value for a given maximum acceptable percentage of overlapped reflections (which can be zero).

It will most commonly be ussed in conjunction with the STRATEGY option (qv).

TESTGEN START phstart END phend STEP phstep MINOSC rotmin MAXOSC rotmax OVERLAP x

START phstart Define the starting phi. This keyword MUST be given.

END phend Define the ending phi. This keyword MUST be given.

STEP phstep The optimum rotation angle will be calculated every "phstep" degrees between "phstart" and "phend".

Default: 5 degrees

OVERLAP x The maximum rotation angle giving less than x% overlapped reflections will be calculated. Note that x is in PERCENT. Default 0%

MINOSC rotmin MAXOSC rotmax Only rotation angles between "rotmin" and "rotmax" will be considered.

Default: rotmin 0.2, rotmax 5.0

ANGLE oscang If the ANGLE keyword is given, then the overlap for a fixed oscillation angle "oscang" is calculated between phi=phstart and phi=phend. No attempt to find the "best" oscillation angle is made.

Note that the TESTGEN keyword can be given at the STRATEGY prompt or at the normnal MOSFLM prompt (without running the STRATEGY option).

Allows an optimum oscillation angle to be determined to avoid an excessive number of spatial overlaps.

The program will generate reflection lists for all angles between phstart and phend in steps of phstep. For each angle, the MAXIMUM oscillation angle which gives fewer than "x" overlaps (where x is a PERCENTAGE of the total number of reflections generated) will be determined, using oscillations between "oscmin" and "oscmax". The completeness analysis in the STRATEGY option assumes that NO reflections are spatially overlapped. Providing that spots within a lune (ie in the same plane in reciprocal space) are not overlapping, spatial overlaps can usually be reduced to an acceptable level by an appropriate choice of oscillation angle for each image. The determination of whether or not a reflection is spatially overlapped depends crucially on the mosaic spread, beam divergence parameters and the minimum allowed spot separation. The mosaic spread and the minimum spot separation can be reset at the STRATEGY prompt to test how critical these values are, using keywords MOSAIC and SEPARATION respectively.

  eg TESTGEN START 0 END 90 OVER 1

Will determine the MAXIMUM oscillation angle between phi=0 and phi=90 (in steps of 5 degrees) that give less than 1% overlaps.