Each marker needs to be typed against an identical copy of the same 96 or so panel members. For a typical project of a few thousand markers, this corresponds to several hundred thousand PCRs.

Almost all the PCRs are set up robotically in 384 well microtitre plates. The completed PCRs are either typed by melting curve analysis, or by electrophoresis on robotically-loaded pre-cast gels of our own design (see ‘How do you type a marker’ for more details)

Total throughput is about 100 markers per day using gel-typing, or 200 markers (19,200 PCRs) using melting-curve analysis.

All this is made possible by a fast, flexible robotic system, affectionately known as the Beast. The Beast is a multi-tool general-purpose robot, developed at LMB and built by our own mechanical and electronic workshops.

Further automation is being developed, including the use of microarray-based marker typing.