7. Analysis of pathogenicity islands in uropathogenic E. coli (Strain 536) (back)

Predicted H-NS binding sites

Input motif
Resulting motif

Average AT content

GO term overrepresentation
Propensity	Count	Annotation term
No significant overrepresentation was found.
20.433	1	3-deoxy-manno-octulosonate cytidylyltransferase activity
10.217	1	3-deoxy-7-phosphoheptulonate synthase activity
10.217	1	lysine-tRNA ligase activity
5.108	1	DNA binding
2.554	1	receptor activity
2.270	1	transaminase activity
2.151	1	helicase activity
1.572	1	aminoacyl-tRNA ligase activity

Genes with a predicted H-NS binding site (back)
Gene	Binding site logo	Motif alignment	bs (u,d)	rel bs pos.	abs gene pos. + len	fold change	Gene locus	PID	Interactions	Annotation
ECP_0279		GGGATTAATA	1 (1,0)	-37	300321 300704 384	n/a	ECP_0278 ECP_0279	110342077	H-NS & ECP_0279	putative transposase
ECP_0280		TCTATAAATC	1 (0,1)	+29	301428 301625 198	n/a	ECP_0280 ECP_0281	110342078	H-NS & ECP_0280	hypothetical protein
ECP_0281		TCTATAAATC	1 (1,0)	-192	301649 302683 1035	n/a	ECP_0280 ECP_0281 ECP_0282	110342079	H-NS & ECP_0281	phospho-2-dehydro-3-deoxyheptonate aldolase, Trp-sensitive 3-deoxy-7-phosphoheptulonate synthase activity transferase activity
ECP_0284		TCCATAAAAT	1 (1,0)	-187	304411 304710 300	n/a	ECP_0285 ECP_0283 ECP_0284	110342082	H-NS & ECP_0284	putative transposase
ECP_0286		TAGTTACATT	1 (1,0)	-18	306132 306464 333	n/a	ECP_0285 ECP_0286 ECP_0287	110342084	H-NS & ECP_0286	hypothetical protein
ECP_0288		TGGTTTAATC	1 (1,0)	-152	307422 307892 471	n/a	ECP_0287 ECP_0288	110342086	H-NS & ECP_0288	putative membrane protein
ECP_0290		CCGTTAATTT CGGATAAATA	2 (2,0)	-216, -127	309092 309661 570	n/a	ECP_0289 ECP_0290 ECP_0291	110342088	H-NS & ECP_0290	hypothetical protein
ECP_0291		TCGTTAAAAT	1 (1,0)	-190	309936 310157 222	n/a	ECP_0290 ECP_0292 ECP_0291	110342089	H-NS & ECP_0291	fimbrial transcription regulator protein FaeA
ECP_0292		TCGTTAAAAT	1 (1,0)	-228	310576 310905 330	n/a	ECP_0292 ECP_0293 ECP_0291	110342090	H-NS & ECP_0292	major pilu subunit operon regulatory protein PapB
ECP_0293		CCGATAATAT	1 (1,0)	-161	311279 311824 546	n/a	ECP_0292 ECP_0293 ECP_0294	110342091	H-NS & ECP_0293	S-fimbrial protein subunit precursor
ECP_0294		TGGATAAAAA TCGATATTTT	2 (1,1)	-25, +4	311895 312434 540	n/a	ECP_0293 ECP_0294 ECP_0295	110342092	H-NS & ECP_0294	putative minor F1C fimbrial subunit precursor
ECP_0301		CAGATAAATT	1 (1,0)	-92	319076 319627 552	n/a	ECP_0300 ECP_0301 ECP_0302	110342099	H-NS & ECP_0301	MarR-family transcriptional regulatory protein
ECP_0302		TCAATAAATT	1 (1,0)	-156	320121 322298 2178	n/a	ECP_0301 ECP_0302 ECP_0303	110342100	H-NS & ECP_0302	TonB dependent outer membrane siderophore receptor receptor activity
ECP_0309		TCGTTATATT	1 (1,0)	-66	331753 332031 279	n/a	ECP_0309	110342107	H-NS & ECP_0309	hypothetical membrane protein
ECP_0317		GGGATATATT TCGATTCATA	2 (2,0)	-204, -155	338889 339026 138	n/a	ECP_0316 ECP_0317 ECP_0318	110342114	H-NS & ECP_0317	hypothetical protein
ECP_0323		TCCATAAAAT	1 (1,0)	-77	342066 342251 186	n/a	ECP_0321 ECP_0322 ECP_0323 ECP_0324	110342120	H-NS & ECP_0323	hypothetical protein
ECP_0325		TCGATAAAGA	1 (1,0)	-169	343652 345148 1497	n/a	ECP_0324 ECP_0325 ECP_0326	110342122	H-NS & ECP_0325	lysyl-tRNA synthetase, heat inducible aminoacyl-tRNA ligase activity lysine-tRNA ligase activity ligase activity
ECP_0326		TCGATACAGA	1 (1,0)	-234	345442 346164 723	n/a	ECP_0325 ECP_0326 ECP_0327	110342123	H-NS & ECP_0326	putative regulatory helix-turn-helix protein, AraC family
ECP_0328		TGGATAAAGT	1 (1,0)	-157	348513 349823 1311	n/a	ECP_0329 ECP_0327 ECP_0328	110342125	H-NS & ECP_0328	amino acid permease
ECP_0329		TGGATAAAGT	1 (1,0)	-229	350210 350572 363	n/a	ECP_0329 ECP_0328 ECP_0330	110342126	H-NS & ECP_0329	putative IS orf
ECP_0332		TCGTTTTATT TCGTTAATAT	2 (2,0)	-229, -200	352586 355714 3129	n/a	ECP_0331 ECP_0332 ECP_0333	110342129	H-NS & ECP_0332	putative autotransporter
ECP_0336		GCGTTTAATC	1 (1,0)	-272	357997 358218 222	n/a	ECP_0335 ECP_0336 ECP_0337	110342133	H-NS & ECP_0336	hypothetical protein YeeT
ECP_0340		TGGATTCATT	1 (1,0)	-163	359668 359910 243	n/a	ECP_0338 ECP_0339 ECP_0340 ECP_0341	110342137	H-NS & ECP_0340	hypothetical protein
ECP_0341		TCGATTATAT	1 (1,0)	-35	360025 360849 825	n/a	ECP_0339 ECP_0340 ECP_0341 ECP_0342	110342138	H-NS & ECP_0341	hypothetical protein
ECP_0342		TCAATAAAAT	1 (1,0)	-92	360942 362261 1320	n/a	ECP_0341 ECP_0343 ECP_0342	110342139	H-NS & ECP_0342	phage integrase
ECP_0343		TCAATAAAAT	1 (1,0)	-273	362627 362965 339	n/a	ECP_0343 ECP_0342 ECP_0344	110342140	H-NS & ECP_0343	CP4-like integrase
ECP_0346		CCGATAAAGT TCGATAAACT	2 (2,0)	-99, -106	368508 368711 204	n/a	ECP_0347 ECP_0345 ECP_0346	110342143	H-NS & ECP_0346	hypothetical protein
ECP_0347		CCGATAAAGT TCGATAAACT	2 (0,2)	+38, +45	368773 368988 216	n/a	ECP_0347 ECP_0348 ECP_0346	110342144	H-NS & ECP_0347	insertion element IS1 1/2/3/5/6 protein InsA
ECP_0351		TCGTTTAAAT	1 (1,0)	-249	371153 371482 330	n/a	ECP_0350 ECP_0351 ECP_0352	110342148	H-NS & ECP_0351	putative ferredoxin
ECP_0361		TCGATAAATT	1 (1,0)	-200	381007 382149 1143	n/a	ECP_0361 ECP_0362	110342158	H-NS & ECP_0361	probable NADH-dependent flavin oxidoreductase YqiG oxidoreductase activity
ECP_0362		TCGATAAAAC	1 (0,1)	+21	382321 383241 921	n/a	ECP_0363 ECP_0361 ECP_0362	110342159	H-NS & ECP_0362	hypothetical protein YcjY
ECP_0363		TCGATAAAAC	1 (1,0)	-177	383398 384324 927	n/a	ECP_0363 ECP_0364 ECP_0362	110342160	H-NS & ECP_0363	putative lysR-family transcriptional regulator
ECP_0364		TGGTTAAAAT	1 (1,0)	-73	384524 385417 894	n/a	ECP_0363 ECP_0364 ECP_0365	110342161	H-NS & ECP_0364	putative LysR-family transcriptional regulatory protein
ECP_0367		TCATTAAATA TGGATATATT TCGTTAATTC	3 (3,0)	-242, -152, -30	387881 392128 4248	n/a	ECP_0367 ECP_0368	110342164	H-NS & ECP_0367	putative adhesin/invasin
ECP_0369		CCGATAAAGA	1 (0,1)	+68	393358 394227 870	n/a	ECP_0369 ECP_0368 ECP_0370	110342166	H-NS & ECP_0369	putative aldo/keto reductase
ECP_0370		GAGATAAAAT	1 (0,1)	+40	394387 394980 594	n/a	ECP_0369 ECP_0370 ECP_0371 ECP_0372	110342167	H-NS & ECP_0370	putative membrane protein
ECP_0372		TAGATTAATT	1 (1,0)	-165	395337 396662 1326	n/a	ECP_0373 ECP_0370 ECP_0371 ECP_0372	110342169	H-NS & ECP_0372	probable pyridine nucleotide-disulfide oxidoreductase YkgC
ECP_0373		TAGATTAATT	1 (1,0)	-61	396889 397743 855	n/a	ECP_0373 ECP_0372	110342170	H-NS & ECP_0373	putative transcriptional regulator, AraC family protein
ECP_0374		TCAATAAATA	1 (1,0)	-75	398270 398989 720	n/a	ECP_0374 ECP_0375	110342171	H-NS & ECP_0374	hypothetical protein YkgE
ECP_0376		GCGATAAAAA	1 (1,0)	-216	400420 401115 696	n/a	ECP_0375 ECP_0376 ECP_0377 ECP_0378	110342173	H-NS & ECP_0376	hypothetical protein
ECP_0378		TGGATATATT GCTATAAATA	2 (2,0)	-1, -108	401358 402026 669	n/a	ECP_0376 ECP_0377 ECP_0378 ECP_0379	110342175	H-NS & ECP_0378	hypothetical protein YkgH
ECP_0380		TCAATAAATT	1 (1,0)	-228	404549 405310 762	n/a	ECP_0379 ECP_0380 ECP_0381	110342177	H-NS & ECP_0380	putative cytoplasmic protein
ECP_1910		TCCTTAAATT	1 (1,0)	-17	1949001 1950821 1821	n/a	ECP_1909 ECP_1910 ECP_1911	110343674	H-NS & ECP_1910	hypothetical protein
ECP_1912		GAGTTAAATA	1 (1,0)	-79	1952452 1953009 558	n/a	ECP_1911 ECP_1912 ECP_1913	110343676	H-NS & ECP_1912	putative type IV pilin protein precursor
ECP_1913		GCGTTACTTA	1 (1,0)	-162	1953408 1953713 306	n/a	ECP_1912 ECP_1913	110343677	H-NS & ECP_1913	hypothetical protein
ECP_1919		TCGTTTAAAA TCGATAAAAA TCGATAATTA TCGATATAAA	4 (4,0)	-149, -211, -274, -287	1958801 1959331 531	n/a	ECP_1917 ECP_1920 ECP_1918 ECP_1919	110343683	H-NS & ECP_1919	hypothetical protein
ECP_1920		TCGTTTAAAA TCGATAAAAA TCGATAATTA TCGATATAAA	4 (4,0)	-283, -221, -158, -145	1959764 1960237 474	n/a	ECP_1920 ECP_1921 ECP_1919 ECP_1922	110343684	H-NS & ECP_1920	hypothetical protein
ECP_1921		GGGATTTATT	1 (0,1)	+64	1960269 1960439 171	n/a	ECP_1920 ECP_1921 ECP_1922	110343685	H-NS & ECP_1921	hypothetical protein
ECP_1923		TGGATATATA GCGATAAAGA	2 (2,0)	-99, -252	1961960 1962922 963	n/a	ECP_1922 ECP_1923	110343687	H-NS & ECP_1923	hypothetical protein
ECP_1925		TGGATATATT TGGATAAAAT TCGATTAAAT	3 (3,0)	-141, -153, -202	1964942 1965673 732	n/a	ECP_1924 ECP_1926 ECP_1925	110343689	H-NS & ECP_1925	hypothetical protein
ECP_1926		TGGATATATT TGGATAAAAT TCGATTAAAT	3 (2,1)	-32, -20, +29	1965847 1966326 480	n/a	ECP_1926 ECP_1927 ECP_1925	110343690	H-NS & ECP_1926	hypothetical protein
ECP_1927		GCGATTAATA	1 (1,0)	-36	1966487 1966891 405	n/a	ECP_1926 ECP_1927 ECP_1928	110343691	H-NS & ECP_1927	putative DNA-binding protein DNA binding
ECP_1928		TCGATAAAAA	1 (1,0)	-38	1966955 1967305 351	n/a	ECP_1927 ECP_1928 ECP_1929 ECP_1930	110343692	H-NS & ECP_1928	hypothetical protein
ECP_1929		TCGTTTTATC	1 (1,0)	-279	1967414 1967656 243	n/a	ECP_1928 ECP_1929 ECP_1930 ECP_1931	110343693	H-NS & ECP_1929	hypothetical protein
ECP_1930		TCCATAAATC	1 (1,0)	-125	1967729 1968025 297	n/a	ECP_1928 ECP_1929 ECP_1930 ECP_1931 ECP_1932	110343694	H-NS & ECP_1930	hypothetical protein
ECP_1931		TCGATTTAAA CGGATAAATC	2 (2,0)	-238, -260	1968078 1968368 291	n/a	ECP_1929 ECP_1930 ECP_1931 ECP_1932	110343695	H-NS & ECP_1931	hypothetical protein
ECP_1932		TCGATTTAAA CGGATAAATC	2 (0,2)	+62, +40	1968450 1968668 219	n/a	ECP_1930 ECP_1931 ECP_1932 ECP_1933	110343696	H-NS & ECP_1932	putative regulatory protein
ECP_1948		TAGATAAATA	1 (1,0)	-69	2002251 2003000 750	n/a	ECP_1948 ECP_1949 ECP_1950	110343711	H-NS & ECP_1948	hypothetical protein
ECP_1949		GGGTTAAATT	1 (1,0)	-234	2002927 2003097 171	n/a	ECP_1948 ECP_1949 ECP_1950	110343712	H-NS & ECP_1949	hypothetical protein
ECP_1951		GCGATATATC	1 (1,0)	-158	2004615 2005091 477	n/a	ECP_1950 ECP_1951 ECP_1952	110343714	H-NS & ECP_1951	hypothetical protein
ECP_1952		GCCATAAAAT	1 (1,0)	-191	2005219 2006271 1053	n/a	ECP_1951 ECP_1953 ECP_1954 ECP_1952	110343715	H-NS & ECP_1952	hypothetical protein YeeL
ECP_1953		TCTATTAATT	1 (1,0)	-210	2006300 2006458 159	n/a	ECP_1953 ECP_1954 ECP_1952	110343716	H-NS & ECP_1953	hypothetical protein
ECP_1954		GCCATAAAAT	1 (1,0)	-123	2006586 2007902 1317	n/a	ECP_1953 ECP_1954 ECP_1955 ECP_1952	110343717	H-NS & ECP_1954	shikimate transporter
ECP_1956		TGCATAAATT	1 (0,1)	+63	2009801 2010517 717	n/a	ECP_1955 ECP_1956 ECP_1957	110343719	H-NS & ECP_1956	hypothetical protein YeeN
ECP_1957		TCGATTAAGC	1 (0,1)	+13	2010573 2010860 288	n/a	ECP_1956 ECP_1957	110343720	H-NS & ECP_1957	hypothetical protein
ECP_1959		TCCTTAAATT	1 (1,0)	-220	2012392 2013342 951	n/a	ECP_1958 ECP_1959 ECP_1960	110343722	H-NS & ECP_1959	transcriptional regulator cbl
ECP_1963		GCTATTAATA	1 (0,1)	+45	2016992 2017504 513	n/a	ECP_1962 ECP_1963 ECP_1964	110343725	H-NS & ECP_1963	hypothetical protein
ECP_1964		TCGTTTAATT	1 (1,0)	-29	2017539 2018261 723	n/a	ECP_1963 ECP_1964 ECP_1965	110343726	H-NS & ECP_1964	putative thioesterase
ECP_1965		GAGATAAATT	1 (1,0)	-38	2018254 2019768 1515	n/a	ECP_1964 ECP_1965 ECP_1966	110343727	H-NS & ECP_1965	hypothetical protein
ECP_1972		GCGTTTCATT	1 (1,0)	-32	2042611 2045643 3033	n/a	ECP_1971 ECP_1972 ECP_1973	110343734	H-NS & ECP_1972	probable polyketide synthase protein
ECP_1975		TCAATAAAAT	1 (1,0)	-41	2051802 2052932 1131	n/a	ECP_1974 ECP_1975 ECP_1976 ECP_1977	110343737	H-NS & ECP_1975	putative acyl-CoA dehydrogenase
ECP_1976		GCGATAAAAC	1 (1,0)	-57	2052936 2053184 249	n/a	ECP_1975 ECP_1976 ECP_1977	110343738	H-NS & ECP_1976	putative D-alanyl carrier protein
ECP_1979		TCTATAAATC	1 (1,0)	-20	2056734 2066354 9621	n/a	ECP_1980 ECP_1981 ECP_1978 ECP_1979	110343741	H-NS & ECP_1979	putative polyketide synthase
ECP_1980		TCTATAAATC	1 (1,0)	-18	2066393 2066581 189	n/a	ECP_1980 ECP_1981 ECP_1982 ECP_1979	110343742	H-NS & ECP_1980	hypothetical protein
ECP_1982		GCGTTTTATT	1 (0,1)	+87	2067001 2067735 735	n/a	ECP_1980 ECP_1981 ECP_1982 ECP_1983	110343744	H-NS & ECP_1982	probable 4'-phosphopantetheinyl transferase transferase activity
ECP_1983		GCGATTCAAT TCGATAATAT	2 (2,0)	-149, -111	2067881 2068147 267	n/a	ECP_1982 ECP_1983 ECP_1984	110343745	H-NS & ECP_1983	IS1400 transposase A
ECP_1985		GAGATAAATT	1 (1,0)	-285	2068722 2068949 228	n/a	ECP_1984 ECP_1985 ECP_1986	110343747	H-NS & ECP_1985	putative transposase
ECP_1990		GCGATAAAGA	1 (1,0)	-247	2071844 2072587 744	n/a	ECP_1989 ECP_1990 ECP_1991	110343752	H-NS & ECP_1990	cobalamin [5'-phosphate] synthase transferase activity
ECP_1991		GCGATTAATA	1 (1,0)	-84	2072584 2073129 546	n/a	ECP_1990 ECP_1991 ECP_1992	110343753	H-NS & ECP_1991	cobalamin biosynthesis protein CobU
ECP_1993		TCTATAAAGT GCAATTAATT	2 (2,0)	-204, -26	2074497 2074694 198	n/a	ECP_1993 ECP_1994	110343755	H-NS & ECP_1993	hypothetical protein
ECP_1995		GGGATAAATC GGGATAAATA	2 (2,0)	-32, -57	2076923 2077207 285	n/a	ECP_1994 ECP_1995 ECP_1996	110343757	H-NS & ECP_1995	hypothetical protein
ECP_1999		TCGTTATATT	1 (1,0)	-259	2080886 2082082 1197	n/a	ECP_1998 ECP_1999 ECP_2000	110343761	H-NS & ECP_1999	hypothetical protein YaiP
ECP_2000		GAGATAAATA TCCATAAATA	2 (2,0)	-202, -4	2081949 2082641 693	n/a	ECP_1999 ECP_2000 ECP_2001	110343762	H-NS & ECP_2000	hypothetical protein
ECP_2001		GCGATAATTC GCGATAAATT	2 (2,0)	-194, -176	2082643 2083416 774	n/a	ECP_2000 ECP_2001 ECP_2002	110343763	H-NS & ECP_2001	hypothetical protein YaiO
ECP_2004		TCGTTACATT	1 (0,1)	+85	2084418 2085632 1215	n/a	ECP_2002 ECP_2003 ECP_2004 ECP_2005	110343766	H-NS & ECP_2004	putative carbohydrate kinase kinase activity
ECP_2005		TCGTTAAAAA	1 (1,0)	-227	2085646 2086404 759	n/a	ECP_2004 ECP_2005 ECP_2006	110343767	H-NS & ECP_2005	hypothetical protein
ECP_2010		CCGATTTATT	1 (1,0)	-160	2088872 2089033 162	n/a	ECP_2007 ECP_2008 ECP_2009 ECP_2010 ECP_2011	110343772	H-NS & ECP_2010	putative transposase (part)
ECP_2011		GGGATTAATA	1 (1,0)	-163	2089112 2089969 858	n/a	ECP_2008 ECP_2009 ECP_2010 ECP_2011 ECP_2012	110343773	H-NS & ECP_2011	putative transposase
ECP_2012		TCGACAAATT	1 (0,1)	+71	2090228 2090491 264	n/a	ECP_2011 ECP_2012 ECP_2013	110343774	H-NS & ECP_2012	putative truncated transposase
ECP_2015		TGGTTAAATC	1 (1,0)	-112	2091727 2092185 459	n/a	ECP_2014 ECP_2015 ECP_2016	110343777	H-NS & ECP_2015	hypothetical protein
ECP_2016		TGGTTAAATC	1 (0,1)	0	2092100 2092297 198	n/a	ECP_2015 ECP_2016	110343778	H-NS & ECP_2016	hypothetical protein
ECP_2018		GCGATAAAGA CCGATAAAGA	2 (1,1)	+37, -266	2093412 2093645 234	n/a	ECP_2017 ECP_2019 ECP_2018	110343780	H-NS & ECP_2018	hypothetical protein
ECP_2019		GCGATAAAGA CCGATAAAGA	2 (1,1)	-268, +35	2093877 2095073 1197	n/a	ECP_2017 ECP_2019 ECP_2020 ECP_2021 ECP_2018	110343781	H-NS & ECP_2019	putative transposase
ECP_2020		CCGATTATTT	1 (1,0)	-103	2095269 2095475 207	n/a	ECP_2019 ECP_2020 ECP_2021	110343782	H-NS & ECP_2020	putative regulatory protein
ECP_2030		CGGATATATA	1 (1,0)	-265	2100495 2101280 786	n/a	ECP_2029 ECP_2030 ECP_2031 ECP_2032	110343792	H-NS & ECP_2030	hypothetical protein
ECP_2031		CGGATAAAAT	1 (1,0)	-141	2101205 2101666 462	n/a	ECP_2030 ECP_2031 ECP_2032	110343793	H-NS & ECP_2031	hypothetical protein
ECP_2034		GCGATAAAAA CCGATAAAAC	2 (1,1)	+91, -82	2103272 2104330 1059	n/a	ECP_2033 ECP_2034 ECP_2035	110343796	H-NS & ECP_2034	putative FecCD-family membrane transport protein
ECP_2042		TCCTTAAATT	1 (1,0)	-16	2113777 2114187 411	n/a	ECP_2041 ECP_2042 ECP_2043	110343804	H-NS & ECP_2042	hypothetical protein
ECP_2047		GCGATAATTC	1 (1,0)	-53	2116821 2117189 369	n/a	ECP_2045 ECP_2046 ECP_2047 ECP_2048 ECP_2049	110343809	H-NS & ECP_2047	hypothetical protein YeeU
ECP_2966		GCTATTAATT GCGACAAATA	2 (2,0)	-68, -253	3132074 3133066 993	n/a	ECP_2965 ECP_2966 ECP_2967	110344712	H-NS & ECP_2966	PixG protein
ECP_2970		TCGATTTATT TGGATAATTA	2 (1,1)	+78, -218	3135091 3137661 2571	n/a	ECP_2969 ECP_2970 ECP_2971	110344716	H-NS & ECP_2970	fimbrial usher protein PixC
ECP_2971		TGGTTAAATT	1 (1,0)	-240	3137722 3138309 588	n/a	ECP_2970 ECP_2971 ECP_2972	110344717	H-NS & ECP_2971	PixH protein
ECP_2972		TCTATAAAAT TCAATAAATA	2 (2,0)	-51, -212	3138395 3138928 534	n/a	ECP_2971 ECP_2972	110344718	H-NS & ECP_2972	PixA protein
ECP_2974		GGGATAAAAT	1 (1,0)	-249	3140041 3140535 495	n/a	ECP_2973 ECP_2974 ECP_2975	110344720	H-NS & ECP_2974	hypothetical protein
ECP_2976		GCGATAAAAA	1 (1,0)	-17	3142131 3144140 2010	n/a	ECP_2975 ECP_2976 ECP_2977	110344722	H-NS & ECP_2976	regulatory protein
ECP_2977		GCGTTAATAT TCAATAAAAT	2 (2,0)	-87, -195	3144137 3145408 1272	n/a	ECP_2978 ECP_2976 ECP_2977	110344723	H-NS & ECP_2977	regulatory protein
ECP_2978		GCGTTAATAT TCAATAAAAT	2 (2,0)	-257, -149	3145753 3147117 1365	n/a	ECP_2978 ECP_2979 ECP_2980 ECP_2977	110344724	H-NS & ECP_2978	transporter protein
ECP_2981		GGGATATATT	1 (1,0)	-138	3148065 3149078 1014	n/a	ECP_2980 ECP_2981 ECP_2982	110344727	H-NS & ECP_2981	putative cytoplasmic protein
ECP_2982		TCATTAAATT	1 (1,0)	-50	3149090 3150406 1317	n/a	ECP_2981 ECP_2982 ECP_2983	110344728	H-NS & ECP_2982	putative L-fucose permease
ECP_2987		GCGATTCAAT	1 (1,0)	-146	3153510 3153731 222	n/a	ECP_2987 ECP_2988	110344733	H-NS & ECP_2987	hypothetical protein
ECP_2988		CCGATTCATT CCGTTATATT	2 (2,0)	-41, -64	3153836 3154369 534	n/a	ECP_2987 ECP_2988 ECP_2989	110344734	H-NS & ECP_2988	hypothetical protein
ECP_2991		CCGATACATC	1 (1,0)	-206	3155676 3155873 198	n/a	ECP_2989 ECP_2990 ECP_2991 ECP_2992	110344737	H-NS & ECP_2991	hypothetical protein
ECP_2993		TGGTTAAATC	1 (1,0)	-248	3156542 3156925 384	n/a	ECP_2994 ECP_2992 ECP_2993	110344739	H-NS & ECP_2993	hypothetical protein
ECP_2995		TGGTTAAATC	1 (1,0)	-257	3157431 3158453 1023	n/a	ECP_2994 ECP_2995 ECP_2996	110344741	H-NS & ECP_2995	transposase for insertion sequence IS100
ECP_2997		TGGATTCATT	1 (0,1)	+79	3159276 3159854 579	n/a	ECP_2996 ECP_2997 ECP_2998	110344743	H-NS & ECP_2997	hypothetical protein
ECP_3006		TCGTTAAATT	1 (1,0)	-16	3165831 3166457 627	n/a	ECP_3006 ECP_3007	110344752	H-NS & ECP_3006	hypothetical protein
ECP_3007		TAGATATAAT	1 (0,1)	+55	3166597 3167271 675	n/a	ECP_3006 ECP_3008 ECP_3007	110344753	H-NS & ECP_3007	hypothetical protein
ECP_3009		TCGTTTTATT TCGATAAAAC	2 (2,0)	-260, -250	3168808 3171654 2847	n/a	ECP_3008 ECP_3009 ECP_3010 ECP_3011	110344755	H-NS & ECP_3009	putative autotransporter
ECP_3014		GCGTTTAATC	1 (1,0)	-272	3174005 3174226 222	n/a	ECP_3013 ECP_3014 ECP_3015	110344760	H-NS & ECP_3014	hypothetical protein YeeT
ECP_3015		GCGATAATTC	1 (0,1)	+8	3174240 3174668 429	n/a	ECP_3013 ECP_3014 ECP_3015 ECP_3016 ECP_3017	110344761	H-NS & ECP_3015	hypothetical protein YeeU
ECP_3018		TGGATTCATT	1 (1,0)	-163	3175587 3175829 243	n/a	ECP_3016 ECP_3017 ECP_3018 ECP_3019	110344764	H-NS & ECP_3018	hypothetical protein
ECP_3021		TCGACTAATT	1 (1,0)	-78	3179135 3180283 1149	n/a	ECP_3020 ECP_3021 ECP_3022	110344767	H-NS & ECP_3021	capsule polysaccharide export inner-membrane protein KpsE
ECP_3023		TCGATTCATA	1 (1,0)	-98	3181993 3182733 741	n/a	ECP_3022 ECP_3023 ECP_3024	110344769	H-NS & ECP_3023	3-deoxy-manno-octulosonate cytidylyltransferase 3-deoxy-manno-octulosonate cytidylyltransferase activity transferase activity nucleotidyltransferase activity
ECP_3026		CCCATAAATT	1 (1,0)	-64	3184702 3185253 552	n/a	ECP_3025 ECP_3026 ECP_3027	110344772	H-NS & ECP_3026	hypothetical protein
ECP_3027		TCGATATATC	1 (1,0)	-176	3185408 3186658 1251	n/a	ECP_3026 ECP_3027 ECP_3028	110344773	H-NS & ECP_3027	capsule polysaccharide export protein KpsS
ECP_3028		TCAATATATT GCGTTAATTT	2 (2,0)	-69, -78	3186695 3188824 2130	n/a	ECP_3027 ECP_3028 ECP_3029	110344774	H-NS & ECP_3028	capsule export protein KpsC
ECP_3031		TCTTTAAATT	1 (0,1)	+21	3190414 3191052 639	n/a	ECP_3029 ECP_3030 ECP_3031 ECP_3032	110344777	H-NS & ECP_3031	hypothetical protein
ECP_3036		TGGATAAAAT GGGATAAATA	2 (2,0)	-89, -161	3195541 3196317 777	n/a	ECP_3035 ECP_3036	110344782	H-NS & ECP_3036	polysialic acid transport protein KpsM
ECP_3037		GCGATAAATT GCGATATTTT	2 (1,1)	+16, -266	3197373 3197909 537	n/a	ECP_3037 ECP_3038	110344783	H-NS & ECP_3037	hypothetical type II secretion protein GspM
ECP_3039		GGGATTAATT	1 (1,0)	-157	3199086 3200063 978	n/a	ECP_3038 ECP_3039 ECP_3040	110344785	H-NS & ECP_3039	hypothetical type II secretion protein GspK
ECP_3045		CGGATAAATA TCGATTTAAA	2 (2,0)	-199, -242	3203292 3204785 1494	n/a	ECP_3044 ECP_3045 ECP_3046	110344791	H-NS & ECP_3045	hypothetical type II secretion protein GspE
ECP_3046		TGGATTAAAT	1 (1,0)	-16	3204785 3206845 2061	n/a	ECP_3045 ECP_3046 ECP_3047	110344792	H-NS & ECP_3046	hypothetical type II secretion protein GspD
ECP_3047		GAGATAAATT CCGATTAAAT	2 (1,1)	+38, -278	3206875 3207834 960	n/a	ECP_3046 ECP_3047 ECP_3048 ECP_3049	110344793	H-NS & ECP_3047	hypothetical type II secretion protein GspC
ECP_3766		TCGTTTCATT	1 (0,1)	+11	3949965 3950912 948	n/a	ECP_3766 ECP_3767	110345500	H-NS & ECP_3766	putative type II 5-cytosoine methyltransferase methyltransferase activity transferase activity
ECP_3768		TCGACAAATA	1 (1,0)	-147	3951905 3953161 1257	n/a	ECP_3767 ECP_3768	110345502	H-NS & ECP_3768	hypothetical protein
ECP_3769		TCATTAAATT TCGTCAAATT	2 (1,1)	-118, +65	3953679 3953927 249	n/a	ECP_3769 ECP_3770	110345503	H-NS & ECP_3769	hypothetical protein
ECP_3770		TAGATAAATA	1 (0,1)	+12	3954069 3954209 141	n/a	ECP_3769 ECP_3770	110345504	H-NS & ECP_3770	hypothetical protein
ECP_3776		CAGATAAATT	1 (1,0)	-84	3958381 3958932 552	n/a	ECP_3775 ECP_3776 ECP_3777 ECP_3778	110345510	H-NS & ECP_3776	MarR-family transcriptional regulatory protein
ECP_3778		GCGTTAAATT	1 (1,0)	-229	3959407 3959619 213	n/a	ECP_3779 ECP_3776 ECP_3777 ECP_3778 ECP_3780	110345512	H-NS & ECP_3778	hypothetical protein
ECP_3781		CGGATAAAAT	1 (1,0)	-231	3960415 3960690 276	n/a	ECP_3781 ECP_3780 ECP_3782	110345515	H-NS & ECP_3781	hypothetical protein
ECP_3786		TCGATACAGT	1 (1,0)	-195	3965689 3965955 267	n/a	ECP_3786 ECP_3785 ECP_3787	110345520	H-NS & ECP_3786	hypothetical protein
ECP_3787		TGGATAAAAT	1 (0,1)	+10	3966233 3966655 423	n/a	ECP_3786 ECP_3787 ECP_3788	110345521	H-NS & ECP_3787	putative membrane protein
ECP_3788		TCCATATATT	1 (0,1)	+4	3966658 3967887 1230	n/a	ECP_3787 ECP_3788 ECP_3789	110345522	H-NS & ECP_3788	putative FMN-dependent dehydrogenase
ECP_3797		TGGATAAATA	1 (1,0)	-231	3972603 3972884 282	n/a	ECP_3796 ECP_3797	110345531	H-NS & ECP_3797	hypothetical protein
ECP_3798		GCGATAAAAA	1 (1,0)	-273	3973972 3974538 567	n/a	ECP_3798 ECP_3799	110345532	H-NS & ECP_3798	hypothetical protein
ECP_3799		TCGATAATAT	1 (1,0)	-241	3974653 3975357 705	n/a	ECP_3798 ECP_3799 ECP_3800 ECP_3801	110345533	H-NS & ECP_3799	hypothetical protein
ECP_3802		GGGATAAAAT GCGTTTTATT	2 (1,1)	-10, +45	3975890 3976072 183	n/a	ECP_3800 ECP_3801 ECP_3802 ECP_3803 ECP_3804	110345536	H-NS & ECP_3802	hypothetical protein
ECP_3803		GGGATAAAAT GCGTTTTATT	2 (2,0)	-226, -171	3976106 3976387 282	n/a	ECP_3800 ECP_3801 ECP_3802 ECP_3803 ECP_3804	110345537	H-NS & ECP_3803	hypothetical protein
ECP_3805		CCGATTCATT CCGTTATATT	2 (2,0)	-70, -93	3977161 3977388 228	n/a	ECP_3804 ECP_3805 ECP_3806	110345539	H-NS & ECP_3805	hypothetical protein
ECP_3808		TCGACAAAAT	1 (0,1)	+70	3978847 3979020 174	n/a	ECP_3809 ECP_3807 ECP_3808	110345542	H-NS & ECP_3808	hypothetical protein
ECP_3809		TCGACAAAAT	1 (1,0)	-121	3979072 3979209 138	n/a	ECP_3809 ECP_3807 ECP_3808 ECP_3810	110345543	H-NS & ECP_3809	hypothetical protein
ECP_3810		TCGTTTATTT GCGATAAAAA TCGATAAATT	3 (1,2)	+54, +12, -9	3979617 3980447 831	n/a	ECP_3809 ECP_3811 ECP_3810	110345544	H-NS & ECP_3810	putative CS12 fimbrial-like upstream regulatory protein
ECP_3811		TCGTTTATTT GCGATAAAAA TCGATAAATT	3 (3,0)	-182, -140, -119	3980576 3981229 654	n/a	ECP_3811 ECP_3812 ECP_3810	110345545	H-NS & ECP_3811	putative CS12 fimbria-like major fimbrial protein subunit
ECP_3813		TGGATAATTT	1 (1,0)	-248	3981967 3982398 432	n/a	ECP_3812 ECP_3813 ECP_3814	110345547	H-NS & ECP_3813	CS12 fimbria chaperone protein
ECP_3814		CAGATAAATA	1 (1,0)	-170	3982471 3984978 2508	n/a	ECP_3812 ECP_3813 ECP_3814 ECP_3815 ECP_3816	110345548	H-NS & ECP_3814	CS12 fimbria outer membrane usher protein precursor
ECP_3816		GCGTTATATA TGGATATATA	2 (2,0)	-218, -214	3985408 3985956 549	n/a	ECP_3814 ECP_3815 ECP_3816 ECP_3817	110345550	H-NS & ECP_3816	CS12 fimbria minor subunit protein precursor
ECP_3817		GGGATATAAT	1 (1,0)	-254	3985976 3987241 1266	n/a	ECP_3816 ECP_3817 ECP_3818	110345551	H-NS & ECP_3817	FasG-like protein
ECP_3818		CCGATAAAGA	1 (0,1)	+43	3987475 3988671 1197	n/a	ECP_3817 ECP_3818 ECP_3819 ECP_3820	110345552	H-NS & ECP_3818	putative transposase
ECP_3828		TCCATTAATT CGGTTAAATT	2 (2,0)	-223, -63	3996715 3998838 2124	n/a	ECP_3827 ECP_3828 ECP_3829	110345562	H-NS & ECP_3828	alpha-hemolysin translocation ATP-binding protein HlyB ATP binding
ECP_3835		GCGACAAATA	1 (0,1)	+70	4005143 4005958 816	n/a	ECP_3835 ECP_3836	110345569	H-NS & ECP_3835	possible AraC-family transcriptional regulator
ECP_3848		TGGTTAAATA	1 (1,0)	-268	4016243 4016446 204	n/a	ECP_3850 ECP_3847 ECP_3848 ECP_3849	110345582	H-NS & ECP_3848	hypothetical protein
ECP_3849		TGGTTAAATA	1 (0,1)	+76	4016473 4016790 318	n/a	ECP_3850 ECP_3847 ECP_3848 ECP_3849	110345583	H-NS & ECP_3849	putative transposase
ECP_3850		TGGTTAAATA	1 (1,0)	-220	4016935 4017819 885	n/a	ECP_3850 ECP_3851 ECP_3848 ECP_3849	110345584	H-NS & ECP_3850	hypothetical protein
ECP_3853		TCGATAAATT	1 (1,0)	-21	4019533 4019766 234	n/a	ECP_3852 ECP_3853 ECP_3854	110345587	H-NS & ECP_3853	putative cytoplasmic protein
ECP_3857		GCGTTTAATC	1 (1,0)	-266	4021805 4022026 222	n/a	ECP_3856 ECP_3857 ECP_3858	110345591	H-NS & ECP_3857	hypothetical protein
ECP_3858		GCGATAATTC	1 (1,0)	-53	4022100 4022468 369	n/a	ECP_3856 ECP_3857 ECP_3858 ECP_3859 ECP_3860	110345592	H-NS & ECP_3858	hypothetical protein
ECP_3859		TGGATAAAAA	1 (1,0)	-119	4022558 4022932 375	n/a	ECP_3858 ECP_3859 ECP_3860 ECP_3861	110345593	H-NS & ECP_3859	hypothetical protein
ECP_3861		TGGATTCATT	1 (1,0)	-163	4023375 4023617 243	n/a	ECP_3859 ECP_3860 ECP_3861 ECP_3862	110345595	H-NS & ECP_3861	hypothetical protein
ECP_4521		TAGATAAATA	1 (1,0)	-133	4735418 4736680 1263	n/a	ECP_4521 ECP_4523 ECP_4519 ECP_4522	110346220	H-NS & ECP_4521	prophage P4 integrase
ECP_4522		TCGATAAATC TGGATAAAAA	2 (2,0)	-49, -90	4736780 4737043 264	n/a	ECP_4521 ECP_4523 ECP_4522	110346221	H-NS & ECP_4522	hypothetical protein
ECP_4523		TCGATAAATC TGGATAAAAA	2 (1,1)	-39, +2	4737132 4740647 3516	n/a	ECP_4521 ECP_4523 ECP_4522 ECP_4524	110346222	H-NS & ECP_4523	putative superfamily I DNA helicases helicase activity
ECP_4524		CCGATATATT GCGATATATT GCGATAATTA GCGATAAATA	4 (4,0)	-4, -78, -150, -236	4740756 4742255 1500	n/a	ECP_4523 ECP_4524 ECP_4525	110346223	H-NS & ECP_4524	hypothetical protein YjgX (putative sulfatase)
ECP_4525		CCGTTTAATA	1 (1,0)	-257	4742430 4743170 741	n/a	ECP_4524 ECP_4525 ECP_4526	110346224	H-NS & ECP_4525	OmpA family protein
ECP_4526		TCGACAAAAT	1 (1,0)	-156	4743388 4743756 369	n/a	ECP_4525 ECP_4526 ECP_4527 ECP_4528	110346225	H-NS & ECP_4526	putative membrane protein
ECP_4531		CAGATAAATT	1 (1,0)	-81	4745321 4745875 555	n/a	ECP_4530 ECP_4531 ECP_4532 ECP_4533	110346230	H-NS & ECP_4531	PapX protein
ECP_4537		TCGTTAATAT	1 (1,0)	-107	4748858 4749439 582	n/a	ECP_4536 ECP_4537 ECP_4538	110346236	H-NS & ECP_4537	protein PapJ precursor
ECP_4539		CGGATAAATT	1 (1,0)	-244	4750281 4752803 2523	n/a	ECP_4538 ECP_4539 ECP_4540	110346238	H-NS & ECP_4539	outer membrane usher protein PapC precursor
ECP_4541		TCGATAAATA	1 (1,0)	-87	4753507 4754124 618	n/a	ECP_4540 ECP_4541 ECP_4542	110346240	H-NS & ECP_4541	PapA
ECP_4542		TCGTTTAAAT TGGATTTATT	2 (2,0)	-98, -278	4754299 4754613 315	n/a	ECP_4541 ECP_4542 ECP_4543	110346241	H-NS & ECP_4542	major pilu subunit operon regulatory protein PapB
ECP_4545		TCTATAAATT	1 (1,0)	-240	4755755 4756123 369	n/a	ECP_4544 ECP_4545 ECP_4546	110346244	H-NS & ECP_4545	hypothetical protein
ECP_4548		GCGTTTTATT	1 (0,1)	+22	4756812 4756970 159	n/a	ECP_4546 ECP_4547 ECP_4549 ECP_4548	110346247	H-NS & ECP_4548	hypothetical protein
ECP_4549		GCGTTTTATT	1 (1,0)	-85	4757034 4757369 336	n/a	ECP_4547 ECP_4549 ECP_4550 ECP_4548	110346248	H-NS & ECP_4549	probable transposase protein
ECP_4552		TCGTTTTATC	1 (1,0)	-234	4759367 4759609 243	n/a	ECP_4551 ECP_4552 ECP_4553	110346251	H-NS & ECP_4552	putative transposase
ECP_4554		CGGTTAAATT TCCATTAATT	2 (2,0)	-55, -215	4761436 4763559 2124	n/a	ECP_4553 ECP_4554 ECP_4555	110346253	H-NS & ECP_4554	alpha-hemolysin translocation ATP-binding protein HlyB
ECP_4558		TCGTTAAAAT	1 (1,0)	-277	4767694 4767897 204	n/a	ECP_4557 ECP_4559 ECP_4556 ECP_4558	110346257	H-NS & ECP_4558	hypothetical protein
ECP_4559		TCGTTAAAAT	1 (1,0)	-180	4768355 4768618 264	n/a	ECP_4559 ECP_4558 ECP_4560	110346258	H-NS & ECP_4559	hypothetical protein
ECP_4560		TCCATAAAAC	1 (1,0)	-164	4768692 4769462 771	n/a	ECP_4559 ECP_4560 ECP_4561	110346259	H-NS & ECP_4560	hypothetical protein
ECP_4561		CCGTTAAAAC TCGTTTATTA	2 (1,1)	+21, -260	4769462 4770061 600	n/a	ECP_4562 ECP_4560 ECP_4561	110346260	H-NS & ECP_4561	hypothetical membrane protein
ECP_4564		GCAATAAATT	1 (1,0)	-73	4771806 4772393 588	n/a	ECP_4563 ECP_4564 ECP_4565	110346263	H-NS & ECP_4564	putative histidine kinase-like ATPases kinase activity
ECP_4566		TGGTTAAATA	1 (1,0)	-268	4773155 4773295 141	n/a	ECP_4565 ECP_4566 ECP_4567 ECP_4568	110346265	H-NS & ECP_4566	hypothetical protein
ECP_4567		TGGTTAAATA	1 (0,1)	+79	4773322 4773642 321	n/a	ECP_4565 ECP_4566 ECP_4567 ECP_4568 ECP_4569	110346266	H-NS & ECP_4567	putative transposase
ECP_4574		TCGATTTTTT	1 (1,0)	-218	4780691 4781047 357	n/a	ECP_4572 ECP_4573 ECP_4574 ECP_4575	110346273	H-NS & ECP_4574	putative membrane protein
ECP_4578		TCGTTAATAT	1 (1,0)	-77	4782205 4782582 378	n/a	ECP_4576 ECP_4577 ECP_4578 ECP_4579 ECP_4580	110346277	H-NS & ECP_4578	hypothetical protein
ECP_4584		CGGATAAATA	1 (0,1)	+70	4795198 4795857 660	n/a	ECP_4582 ECP_4583 ECP_4584 ECP_4585	110346283	H-NS & ECP_4584	hypothetical protein
ECP_4585		GCGTTTTATT	1 (0,1)	+53	4796089 4796637 549	n/a	ECP_4584 ECP_4585 ECP_4586 ECP_4587	110346284	H-NS & ECP_4585	hypothetical protein
ECP_4588		TCGATAATAT	1 (1,0)	-233	4797206 4797898 693	n/a	ECP_4586 ECP_4587 ECP_4588 ECP_4589	110346287	H-NS & ECP_4588	hypothetical protein
ECP_4589		GCGATAAAAA	1 (1,0)	-265	4798013 4798579 567	n/a	ECP_4588 ECP_4589	110346288	H-NS & ECP_4589	hypothetical protein
ECP_4594		TCGATAAAAA	1 (1,0)	-29	4804188 4804517 330	n/a	ECP_4593 ECP_4594 ECP_4595 ECP_4596	110346293	H-NS & ECP_4594	quaternary ammonium compound-resistance protein QacE
ECP_4595		TCGATTTTTT	1 (1,0)	-52	4804533 4804934 402	n/a	ECP_4594 ECP_4595 ECP_4596	110346294	H-NS & ECP_4595	quaternary ammonium compound-resistance protein QacE
ECP_4600		GCGATAAAGT	1 (1,0)	-27	4807736 4811158 3423	n/a	ECP_4599 ECP_4600 ECP_4601	110346299	H-NS & ECP_4600	hypothetical protein
ECP_4601		GCGATAAAAA	1 (1,0)	-264	4811149 4812315 1167	n/a	ECP_4600 ECP_4601 ECP_4602 ECP_4603	110346300	H-NS & ECP_4601	hypothetical protein
ECP_4602		GCGATAAAAA	1 (1,0)	-3	4812319 4812576 258	n/a	ECP_4601 ECP_4602 ECP_4603	110346301	H-NS & ECP_4602	hypothetical protein
ECP_4614		TCGATATATT	1 (0,1)	+68	4819437 4820729 1293	n/a	ECP_4613 ECP_4614 ECP_4615 ECP_4612	110346313	H-NS & ECP_4614	putative aminotransferase transaminase activity transferase activity
ECP_4621		TAGATAAATC	1 (0,1)	+78	4825446 4826324 879	n/a	ECP_4620 ECP_4621 ECP_4622	110346320	H-NS & ECP_4621	hypothetical protein
ECP_4626		TCTATAAAAT	1 (1,0)	-297	4830190 4831074 885	n/a	ECP_4626 ECP_4627 ECP_4625	110346325	H-NS & ECP_4626	hypothetical protein
ECP_4632		GCGTTTAATC	1 (1,0)	-290	4835083 4835304 222	n/a	ECP_4631 ECP_4632 ECP_4633	110346331	H-NS & ECP_4632	hypothetical protein YeeT
ECP_4633		GCGATAATTC	1 (1,0)	-53	4835384 4835752 369	n/a	ECP_4631 ECP_4632 ECP_4633 ECP_4634	110346332	H-NS & ECP_4633	hypothetical protein YeeU
ECP_4636		TGGATTCATT	1 (1,0)	-163	4836671 4836913 243	n/a	ECP_4634 ECP_4635 ECP_4636 ECP_4637 ECP_4638	110346335	H-NS & ECP_4636	hypothetical protein
ECP_4642		GCGATAATTC GGGATAAATC	2 (2,0)	-202, -216	4841845 4842825 981	n/a	ECP_4641 ECP_4642 ECP_4643	110346341	H-NS & ECP_4642	hypothetical protein

209 of 561 genes (or 37.3%) contained a predicted H-NS binding site. These are:

ECP_0279, ECP_0280, ECP_0281, ECP_0284, ECP_0286, ECP_0288, ECP_0290, ECP_0291, ECP_0292, ECP_0293, ECP_0294, ECP_0301, ECP_0302, ECP_0309, ECP_0317, ECP_0323, ECP_0325, ECP_0326, ECP_0328, ECP_0329, ECP_0332, ECP_0336, ECP_0340, ECP_0341, ECP_0342, ECP_0343, ECP_0346, ECP_0347, ECP_0351, ECP_0361, ECP_0362, ECP_0363, ECP_0364, ECP_0367, ECP_0369, ECP_0370, ECP_0372, ECP_0373, ECP_0374, ECP_0376, ECP_0378, ECP_0380, ECP_1910, ECP_1912, ECP_1913, ECP_1919, ECP_1920, ECP_1921, ECP_1923, ECP_1925, ECP_1926, ECP_1927, ECP_1928, ECP_1929, ECP_1930, ECP_1931, ECP_1932, ECP_1948, ECP_1949, ECP_1951, ECP_1952, ECP_1953, ECP_1954, ECP_1956, ECP_1957, ECP_1959, ECP_1963, ECP_1964, ECP_1965, ECP_1972, ECP_1975, ECP_1976, ECP_1979, ECP_1980, ECP_1982, ECP_1983, ECP_1985, ECP_1990, ECP_1991, ECP_1993, ECP_1995, ECP_1999, ECP_2000, ECP_2001, ECP_2004, ECP_2005, ECP_2010, ECP_2011, ECP_2012, ECP_2015, ECP_2016, ECP_2018, ECP_2019, ECP_2020, ECP_2030, ECP_2031, ECP_2034, ECP_2042, ECP_2047, ECP_2966, ECP_2970, ECP_2971, ECP_2972, ECP_2974, ECP_2976, ECP_2977, ECP_2978, ECP_2981, ECP_2982, ECP_2987, ECP_2988, ECP_2991, ECP_2993, ECP_2995, ECP_2997, ECP_3006, ECP_3007, ECP_3009, ECP_3014, ECP_3015, ECP_3018, ECP_3021, ECP_3023, ECP_3026, ECP_3027, ECP_3028, ECP_3031, ECP_3036, ECP_3037, ECP_3039, ECP_3045, ECP_3046, ECP_3047, ECP_3766, ECP_3768, ECP_3769, ECP_3770, ECP_3776, ECP_3778, ECP_3781, ECP_3786, ECP_3787, ECP_3788, ECP_3797, ECP_3798, ECP_3799, ECP_3802, ECP_3803, ECP_3805, ECP_3808, ECP_3809, ECP_3810, ECP_3811, ECP_3813, ECP_3814, ECP_3816, ECP_3817, ECP_3818, ECP_3828, ECP_3835, ECP_3848, ECP_3849, ECP_3850, ECP_3853, ECP_3857, ECP_3858, ECP_3859, ECP_3861, ECP_4521, ECP_4522, ECP_4523, ECP_4524, ECP_4525, ECP_4526, ECP_4531, ECP_4537, ECP_4539, ECP_4541, ECP_4542, ECP_4545, ECP_4548, ECP_4549, ECP_4552, ECP_4554, ECP_4558, ECP_4559, ECP_4560, ECP_4561, ECP_4564, ECP_4566, ECP_4567, ECP_4574, ECP_4578, ECP_4584, ECP_4585, ECP_4588, ECP_4589, ECP_4594, ECP_4595, ECP_4600, ECP_4601, ECP_4602, ECP_ 4614, ECP_4621, ECP_4626, ECP_4632, ECP_4633, ECP_4636, ECP_4642

No strong binding sites were predicted for the following genes (352 of 561):

ECP_0272, ECP_0274, ECP_0275, ECP_0276, ECP_0277, ECP_0278, ECP_0282, ECP_0283, ECP_0285, ECP_0287, ECP_0289, ECP_0295, ECP_0296, ECP_0297, ECP_0298, ECP_0299, ECP_0300, ECP_0303, ECP_0304, ECP_0305, ECP_0306, ECP_0307, ECP_0308, ECP_0311, ECP_0312, ECP_0313, ECP_0314, ECP_0315, ECP_0316, ECP_0318, ECP_0319, ECP_0320, ECP_0321, ECP_0322, ECP_0324, ECP_0327, ECP_0330, ECP_0331, ECP_0333, ECP_0334, ECP_0335, ECP_0337, ECP_0338, ECP_0339, ECP_0344, ECP_0345, ECP_0348, ECP_0349, ECP_0350, ECP_0352, ECP_0353, ECP_0354, ECP_0355, ECP_0356, ECP_0357, ECP_0358, ECP_0359, ECP_0360, ECP_0365, ECP_0366, ECP_0368, ECP_0371, ECP_0375, ECP_0377, ECP_0379, ECP_0381, ECP_0382, ECP_0383, ECP_0384, ECP_0385, ECP_0386, ECP_1909, ECP_1911, ECP_1914, ECP_1915, ECP_1916, ECP_1917, ECP_1918, ECP_1922, ECP_1924, ECP_1933, ECP_1934, ECP_1936, ECP_1937, ECP_1938, ECP_1939, ECP_1940, ECP_1941, ECP_1942, ECP_1943, ECP_1944, ECP_1945, ECP_1946, ECP_1947, ECP_1950, ECP_1955, ECP_1958, ECP_1960, ECP_1962, ECP_1966, ECP_1967, ECP_1968, ECP_1969, ECP_1970, ECP_1971, ECP_1973, ECP_1974, ECP_1977, ECP_1978, ECP_1981, ECP_1984, ECP_1986, ECP_1987, ECP_1988, ECP_1989, ECP_1992, ECP_1994, ECP_1996, ECP_1997, ECP_1998, ECP_2002, ECP_2003, ECP_2006, ECP_2007, ECP_2008, ECP_2009, ECP_2013, ECP_2014, ECP_2017, ECP_2021, ECP_2022, ECP_2023, ECP_2024, ECP_2025, ECP_2026, ECP_2027, ECP_2028, ECP_2029, ECP_2032, ECP_2033, ECP_2035, ECP_2036, ECP_2037, ECP_2038, ECP_2039, ECP_2040, ECP_2041, ECP_2043, ECP_2044, ECP_2045, ECP_2046, ECP_2048, ECP_2960, ECP_2962, ECP_2963, ECP_2964, ECP_2965, ECP_2967, ECP_2968, ECP_2969, ECP_2973, ECP_2975, ECP_2979, ECP_2980, ECP_2983, ECP_2984, ECP_2985, ECP_2986, ECP_2989, ECP_2990, ECP_2992, ECP_2994, ECP_2996, ECP_2998, ECP_2999, ECP_3000, ECP_3001, ECP_3002, ECP_3003, ECP_3004, ECP_3005, ECP_3008, ECP_3010, ECP_3011, ECP_3012, ECP_3013, ECP_3016, ECP_3017, ECP_3019, ECP_3020, ECP_3022, ECP_3024, ECP_3025, ECP_3029, ECP_3030, ECP_3032, ECP_3033, ECP_3034, ECP_3035, ECP_3038, ECP_3040, ECP_3041, ECP_ 3042, ECP_3043, ECP_3044, ECP_3765, ECP_3767, ECP_3771, ECP_3772, ECP_3773, ECP_3774, ECP_3775, ECP_3777, ECP_3779, ECP_3780, ECP_3782, ECP_3783, ECP_3784, ECP_3785, ECP_3789, ECP_3790, ECP_3791, ECP_3792, ECP_3793, ECP_3794, ECP_3795, ECP_3796, ECP_3800, ECP_3801, ECP_3804, ECP_3806, ECP_3807, ECP_3812, ECP_3815, ECP_3819, ECP_3820, ECP_3821, ECP_3822, ECP_3823, ECP_3824, ECP_3825, ECP_3826, ECP_3827, ECP_3829, ECP_3830, ECP_3831, ECP_3832, ECP_3833, ECP_3834, ECP_3836, ECP_3837, ECP_3838, ECP_3839, ECP_3840, ECP_3841, ECP_3842, ECP_3843, ECP_3844, ECP_3845, ECP_3846, ECP_3847, ECP_3851, ECP_3852, ECP_3854, ECP_3855, ECP_3856, ECP_3860, ECP_3862, ECP_3863, ECP_3864, ECP_3865, ECP_4527, ECP_4528, ECP_4529, ECP_4530, ECP_4532, ECP_4533, ECP_4534, ECP_4535, ECP_4536, ECP_4538, ECP_4540, ECP_4543, ECP_4544, ECP_4546, ECP_4547, ECP_4550, ECP_4551, ECP_4553, ECP_4555, ECP_4556, ECP_4557, ECP_4562, ECP_4563, ECP_4565, ECP_4568, ECP_4569, ECP_4570, ECP_4571, ECP_4572, ECP_4573, ECP_4575, ECP_4576, ECP_4577, ECP_4579, ECP_4580, ECP_4581, ECP_4582, ECP_4583, ECP_4586, ECP_4587, ECP_4590, ECP_4591, ECP_4592, ECP_4593, ECP_4596, ECP_4597, ECP_4598, ECP_4599, ECP_4603, ECP_4604, ECP_4605, ECP_4606, ECP_4607, ECP_4608, ECP_4609, ECP_4610, ECP_4611, ECP_4612, ECP_4613, ECP_4615, ECP_4616, ECP_4617, ECP_4618, ECP_4619, ECP_4620, ECP_4622, ECP_4623, ECP_4624, ECP_4625, ECP_4627, ECP_4628, ECP_4629, ECP_4630, ECP_4631, ECP_4634, ECP_4635, ECP_4637, ECP_4638, ECP_4639, ECP_4640, ECP_4641