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We calculate the average AT content in the promoter regions (-300 to +100 bp relative to the start of translation) of different subsets of genes using a +/- 5 bp window. The AT content for genes that are differentially expressed and have a predicted H-NS binding site is shown in red, the AT content for genes that are differentially expressed but have no predicted binding site is shown in blue and the average AT content for all other (non-differentially expressed) genes is shown in black.
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| Genes differentially expressed in H-NS knockout strain |
Excel table |
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| Genes differentially expressed in DNA gyrase and topoisomerase IV knockout strain |
Excel table |
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| Composite set of differentially expressed genes |
Excel table |
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