Interesting Factors


Features:

  • Click on the Swiss-Prot ID to get a niceprot entry for the protein from Swiss-Prot
  • Click on the SUPERFAMILY to get functional domain assignment for the sequence from SUPERFAMILY
  • Click on the Description to get the PDB entry
  • Click on the Type identifier to get the BLAST output from http://www.expasy.org/

Representation of the Type Identifier:

Swiss-Prot ID

MEDLINE reference and
Superfa mily domain assignment

Description

Length

Type

Q44743

Ref(E) Superfamily

Basic Membrane Protein D Precursor.

341

If

Q08429

Ref(E) Superfamily

Kinase Associated Protein B - KapB.

128

If

Q02219

Ref(E) Superfamily

Major Outer Membrane Protein Pan 1 Precursor.

392

If

Q01625

Ref(E) Superfamily

Stage III Sporulation Protein J Precursor.

261

If

P77330

Ref(E) Superfamily

Bor Protein Homolog From Lambdoid Prophage Dlp12 Precursor.

97

If

P55741

Ref(E) Superfamily

Outer Membrane Lipoprotein Slyb Precursor.

155

If

P54916

Ref(E) Superfamily

Conjugal Transfer Protein Trbh Precursor.

159

If

P49941

Ref(E) Superfamily

Spore Germination Protein Kc Precursor.

407

If

P43505

Ref(E) Superfamily

Membrane Fusion Protein Mtrc Precursor.

412

If

P43262

Ref(E) Superfamily

Vacj Lipoprotein Precursor.

251

If

P41069

Ref(E) Superfamily

Trav Protein Precursor.

171

If

P39571

Ref(E) Superfamily

Spore Germination Protein B3 Precursor.

374

If

P37966

Ref(E) Superfamily

Lipoprotein Lpla Precursor.

502

If

P33209

Ref(E) Superfamily

Nodulation Protein Nolt Precursor.

289

If

P27461

Ref(E) Superfamily

Ylpa Lipoprotein Precursor.

245

If

P24145

Ref(E) Superfamily

Nodulation Protein T Precursor.

467

If

P23933

Ref(E) Superfamily

Osmotically Inducible Lipoprotein E Precursor (Activator Of Ntr-Like|Gene).

112

If

P19215

Ref(E) Superfamily

Spiralin.

240

If

P17873

Ref(E) Superfamily

Osmotically Inducible Lipoprotein B Precursor.

72

If

P17323

Ref(E) Superfamily

Lipopeptide Precursor.

46

If

P16450

Ref(E) Superfamily

Spore Germination Protein Gerd Precursor.

185

If

P10101

Ref(E) Superfamily

Rare Lipoprotein B Precursor.

193

If

P10100

Ref(E) Superfamily

Rare Lipoprotein A Precursor.

362

If

P07870

Ref(E) Superfamily

Spore Germination Protein A3 Precursor.

373

If

O50169

Ref(E) Superfamily

Basic Membrane Protein C Precursor.

353

If

O32436

Ref(E) Superfamily

Transcriptional Activator Protein Med Precursor.

317

If

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References

  • Madan Babu, M. and Sankaran, K. (2002) DOLOP - database of bacterial lipoproteins, Bioinformatics. 18:641-643. PDF
  • Madan Babu, M., Leena Priya, M., Tamil Selvan, A., Madera, M., Gough, J. and Sankaran, K. (2003) An updated version of DOLOP with functional assignments to predicted lipoproteins, Journal of Bacteriology, in press.

 

This website is Maintained by M. Madan Babu * and K. Sankaran #
* MRC-Laboratory of Molecular Biology, Cambridge - CB22QH, U.K
# Centre for Biotechnology, Anna University, Chennai - 600025, India

This site is dedicated to Prof. Henry. C. Wu
Last modified : 14th April 2005