Total: 167 A 388 B 727 E Set overlap: ABC 85 0.0909090909090909 AB 44 0.0470588235294118 AC 16 0.0171122994652406 BC 117 0.125133689839572 A 22 0.0235294117647059 B 142 0.151871657754011 C 509 0.544385026737968 ABC 85 52283_51735_52283_ 52283_51735_52283_ A_2 B_26 E_8 4_1_3 36 A_53 B_465 E_206 --A_993 B_8798 E_3827 --A_53 B_465 E_206 -- endn 55021_endc_99999 INPDB CPL Formate/glycerate dehydrogenase catalytic domain-like--NAD(P)-binding Rossmann-fold domains--Formate/glycerate dehydrogenase catalytic domain-like-- 55874_54211_56719_ 55874_54211_56719_ A_6 B_115 E_24 5_3_2 145 A_178 B_2970 E_398 --A_200 B_1096 E_669 --A_12 B_354 E_44 -- endn_82199_99999 endc_99999 NOTPDB CPL ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase--Ribosomal protein S5 domain 2-like--Type II DNA topoisomerase-- 48592_54849_52029_ 48592_54849_52029_ A_37 B_129 E_208 5_2_3 374 A_38 B_136 E_258 --A_39 B_132 E_217 --A_38 B_142 E_269 -- endn_99999 endc_52029_99999 INPDB CPL GroEL equatorial domain-like chaperone equatorial domain--GroEL-intermediate domain like--GroEL apical domain-like-- 51984_53623_53244_ 51984_53623_53244_ A_3 B_200 E_2 5_2_3 205 A_9 B_210 E_6 --A_21 B_536 E_49 --A_16 B_527 E_43 -- endn_99999 52440_endc_99999 INPDB CPL MurCD N-terminal domain--MurD-like peptide ligases, catalytic domain--MurD-like peptide ligases, peptide-binding domain-- 52540_50447_52156_ 52540_50447_52156_ A_17 B_77 E_35 7_4_3 129 A_2129 B_14320 E_12913 --A_102 B_772 E_432 --A_17 B_103 E_43 -- 81271_endn_55826_99999 50447_endc_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--Translation proteins--Initiation factor IF2/eIF5b, domain 3-- 52440_56059_52335_ 52440_56059_52335_ A_9 B_81 E_15 5_2_3 105 A_71 B_698 E_210 --A_192 B_1104 E_490 --A_15 B_241 E_47 -- endn_48108 51556_endc_53671 INPDB CPL PreATP-grasp domain--Glutathione synthetase ATP-binding domain-like--Methylglyoxal synthase-like-- 52540_50447_50465_ 52540_50447_50465_ A_30 B_186 E_147 11_7_4 363 A_2129 B_14320 E_12913 --A_102 B_772 E_432 --A_47 B_206 E_195 -- 51126_endn_48695_57783_46988_57802_99999 52540_53383_endc_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--Translation proteins--EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain-- 81653_81665_81660_ 81653_81665_81660_ A_4 B_46 E_117 6_2_4 167 A_48 B_376 E_513 --A_43 B_361 E_378 --A_16 B_89 E_466 -- endn_99999 56784_endc_47240_99999 INPDB CPL Calcium ATPase, transduction domain A--Calcium ATPase, transmembrane domain M--Calcium ATPase, ATP-binding domain N-- 50677_52374_47323_ 50677_52374_47323_ A_29 B_98 E_46 6_2_4 173 A_53 B_299 E_143 --A_247 B_1540 E_642 --A_100 B_688 E_246 -- endn_99999 47323_46589_endc_99999 INPDB CPL ValRS/IleRS/LeuRS editing domain--Nucleotidylyl transferase--Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases-- 51735_48179_52413_ 51735_48179_52413_ A_21 B_131 E_23 7_4_3 175 A_993 B_8798 E_3827 --A_71 B_674 E_226 --A_23 B_134 E_35 -- endn_53756_51905_99999 51735_endc_99999 INPDB CPL NAD(P)-binding Rossmann-fold domains--6-phosphogluconate dehydrogenase C-terminal domain-like--UDP-glucose dehydrogenase (UDPGDH), C-terminal (UDP-binding) domain-- 52540_47266_52540_ 52540_47266_52540_ A_2 B_1 E_1 3_2_1 4 A_2129 B_14320 E_12913 --A_9 B_44 E_321 --A_2129 B_14320 E_12913 -- endn_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--4-helical cytokines--P-loop containing nucleotide triphosphate hydrolases-- 51338_51556_51338_ 51338_51556_51338_ A_7 B_5 E_2 4_2_2 14 A_82 B_584 E_154 --A_183 B_1070 E_385 --A_82 B_584 E_154 -- endn_99999 endc_99999 INPDB CPL Composite domain of metallo-dependent hydrolases--Metallo-dependent hydrolases--Composite domain of metallo-dependent hydrolases-- 53795_50331_50331_ 53795_50331_50331_ A_21 B_192 E_3 3_1_2 216 A_421 B_3843 E_485 --A_61 B_521 E_45 --A_61 B_521 E_45 -- endn endc_99999 INPDB RPT PEP carboxykinase-like--MOP-like--MOP-like-- 55190_52374_47323_ 55190_52374_47323_ A_12 B_97 E_22 3_2_1 131 A_17 B_103 E_34 --A_247 B_1540 E_642 --A_100 B_688 E_246 -- endn_99999 endc INPDB CPL Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain--Nucleotidylyl transferase--Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases-- 46915_54211_55666_ 46915_54211_55666_ A_2 B_89 E_15 7_2_5 106 A_2 B_92 E_20 --A_200 B_1096 E_669 --A_29 B_159 E_70 -- endn_55666 50249_54791_endc_99999_54814 INPDB CPL Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3--Ribosomal protein S5 domain 2-like--Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5-- 81660_56784_81665_ 81660_56784_81665_ A_10 B_42 E_120 5_3_2 172 A_16 B_89 E_466 --A_230 B_1745 E_1267 --A_43 B_361 E_378 -- endn_81653_99999 endc_99999 INPDB CPL Calcium ATPase, ATP-binding domain N--HAD-like--Calcium ATPase, transmembrane domain M-- 52518_52467_52518_ 52518_52467_52518_ A_40 B_287 E_57 9_5_4 384 A_239 B_1128 E_328 --A_132 B_640 E_265 --A_239 B_1128 E_328 -- 52047_endn_99999_53850_57802 63393_51735_endc_99999 INPDB CPL Thiamin diphosphate-binding fold (THDP-binding)--DHS-like NAD/FAD-binding domain--Thiamin diphosphate-binding fold (THDP-binding)-- 81340_54631_54631_ 81340_54631_54631_ A_9 B_10 E_1 4_2_2 20 A_14 B_111 E_141 --A_209 B_782 E_239 --A_209 B_782 E_239 -- endn_99999 endc_52402 NOTPDB RPT Clc chloride channel--CBS-domain--CBS-domain-- 52540_52540_52540_ 52540_52540_52540_ A_29 B_149 E_173 26_18_8 351 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn_82708_54585_47571_81923_54862_50249_53795_54768_47576_52540_57756_57783_48695_47413_53383_56091_99999 52540_47794_54690_endc_52402_53795_75553_99999 NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 55326_56042_55326_ 55326_56042_55326_ A_16 B_43 E_2 6_4_2 61 A_92 B_231 E_44 --A_93 B_263 E_63 --A_92 B_231 E_44 -- 51246_endn_47060_99999 56042_99999 NOTPDB CPL Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain--Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain--Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain-- 55785_55785_47384_ 55785_55785_47384_ A_10 B_106 E_3 10_7_3 119 A_168 B_1284 E_394 --A_168 B_1284 E_394 --A_45 B_1750 E_74 -- endn_46579_55781_52172_47473_99999_55785 endc_99999_55874 NOTPDB RPT PYP-like sensor domain (PAS domain)--PYP-like sensor domain (PAS domain)--Homodimeric domain of signal transducing histidine kinase-- 57938_49493_49493_ 57938_49493_49493_ A_3 B_29 E_75 6_4_2 107 A_19 B_61 E_147 --A_8 B_140 E_172 --A_8 B_140 E_172 -- 46565_53098_81730_99999 endc_99999 NOTPDB RPT Cysteine-rich domain of the chaperone protein DnaJ.--HSP40/DnaJ peptide-binding domain--HSP40/DnaJ peptide-binding domain-- 49785_49303_51445_ 49785_49303_51445_ A_1 B_77 E_17 13_6_7 95 A_10 B_366 E_724 --A_2 B_88 E_38 --A_89 B_1646 E_1474 -- endn_49785_49899_56988_75005_99999 49785_49899_56988_49303_endc_74650_99999 INPDB CPL Galactose-binding domain-like--beta-Galactosidase/glucuronidase domain--(Trans)glycosidases-- 50129_51735_51735_ 50129_51735_51735_ A_2 B_32 E_7 10_5_5 41 A_67 B_883 E_442 --A_993 B_8798 E_3827 --A_993 B_8798 E_3827 -- 53335_endn_51735_53218_99999 53474_endc_51735_47336_99999 NOTPDB RPT GroES-like--NAD(P)-binding Rossmann-fold domains--NAD(P)-binding Rossmann-fold domains-- 50156_50156_50156_ 50156_50156_50156_ A_1 B_1 E_89 9_4_5 91 A_28 B_534 E_1380 --A_28 B_534 E_1380 --A_28 B_534 E_1380 -- 51045_endn_50156_99999 51182_50044_50156_endc_99999 NOTPDB RPT PDZ domain-like--PDZ domain-like--PDZ domain-like-- 52540_52540_53271_ 52540_52540_53271_ A_2 B_1 E_3 5_3_2 6 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --A_132 B_838 E_254 -- endn_51735_99999 endc_99999 NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--PRTase-like-- 55186_55681_52954_ 55186_55681_52954_ A_3 B_101 E_25 4_3_1 129 A_42 B_237 E_81 --A_205 B_1250 E_450 --A_75 B_353 E_158 -- endn_81271_99999 endc INPDB CPL Threonyl-tRNA synthetase (ThrRS), second 'additional' domain--Class II aaRS and biotin synthetases--Anticodon-binding domain of Class II aaRS-- 46565_48695_49493_ 46565_48695_49493_ A_2 B_56 E_2 4_2_2 60 A_12 B_326 E_827 --A_18 B_378 E_163 --A_8 B_140 E_172 -- endn_99999 endc_99999 NOTPDB CPL Chaperone J-domain--Multiheme cytochromes--HSP40/DnaJ peptide-binding domain-- 56281_52821_52821_ 56281_52821_52821_ A_3 B_12 E_1 3_2_1 16 A_273 B_950 E_318 --A_39 B_452 E_298 --A_39 B_452 E_298 -- endn_99999 endc NOTPDB RPT Metallo-hydrolase/oxidoreductase--Rhodanese/Cell cycle control phosphatase--Rhodanese/Cell cycle control phosphatase-- 52540_50447_54980_ 52540_50447_54980_ A_17 B_356 E_115 10_5_5 488 A_2129 B_14320 E_12913 --A_102 B_772 E_432 --A_28 B_403 E_157 -- 54211_endn_51182_55608_99999 52540_54211_54980_endc_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--Translation proteins--EF-G/eEF-2 domains III and V-- 52540_52540_75553_ 52540_52540_75553_ A_1 B_12 E_6 5_3_2 19 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --A_11 B_73 E_99 -- 52540_endn_99999 52540_99999 NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--Smc hinge domain-- 52518_52922_52518_ 52518_52922_52518_ A_19 B_14 E_2 4_1_3 35 A_239 B_1128 E_328 --A_105 B_497 E_111 --A_239 B_1128 E_328 -- endn 53323_endc_99999 NOTPDB CPL Thiamin diphosphate-binding fold (THDP-binding)--TK C-terminal domain-like--Thiamin diphosphate-binding fold (THDP-binding)-- 46548_51971_51971_ 46548_51971_51971_ A_10 B_88 E_5 10_6_4 103 A_125 B_477 E_67 --A_47 B_404 E_155 --A_47 B_404 E_155 -- endn_54292_52343_99999_69336_54862 46548_51395_endc_99999 NOTPDB RPT alpha-helical ferredoxin--Nucleotide-binding domain--Nucleotide-binding domain-- 55781_47384_55874_ 55781_47384_55874_ A_2 B_78 E_5 10_6_4 85 A_54 B_1030 E_131 --A_45 B_1750 E_74 --A_178 B_2970 E_398 -- endn_55781_52172_55785_99999_53955 52540_52172_endc_99999 NOTPDB CPL GAF domain-like--Homodimeric domain of signal transducing histidine kinase--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 47364_52540_47446_ 47364_52540_47446_ A_16 B_96 E_20 5_2_3 132 A_35 B_206 E_59 --A_2129 B_14320 E_12913 --A_18 B_101 E_23 -- endn_99999 52540_endc_99999 INPDB CPL Domain of the SRP/SRP receptor G-proteins--P-loop containing nucleotide triphosphate hydrolases--Signal peptide-binding domain-- 48452_48439_48452_ 48452_48439_48452_ A_4 B_2 E_18 8_4_4 24 A_146 B_1937 E_3442 --A_48 B_249 E_670 --A_146 B_1937 E_3442 -- endn_54001_48452_99999 48452_endc_48439_99999 NOTPDB CPL TPR-like--Protein prenylyltransferase--TPR-like-- 50447_54980_54211_ 50447_54980_54211_ A_17 B_145 E_94 7_4_3 256 A_102 B_772 E_432 --A_28 B_403 E_157 --A_200 B_1096 E_669 -- 52540_endn_51011_99999 54980_endc_99999 INPDB CPL Translation proteins--EF-G/eEF-2 domains III and V--Ribosomal protein S5 domain 2-like-- 81296_51445_51011_ 81296_51445_51011_ A_4 B_107 E_14 5_3_2 125 A_40 B_404 E_1207 --A_89 B_1646 E_1474 --A_17 B_377 E_212 -- endn_81296_99999 endc_99999 INPDB CPL E set domains--(Trans)glycosidases--alpha-Amylases, C-terminal beta-sheet domain-- 63882_53218_63867_ 63882_53218_63867_ A_13 B_54 E_20 8_4_4 87 A_38 B_93 E_30 --A_63 B_253 E_54 --A_13 B_59 E_22 -- 52540_endn_53218_99999 endc_53218_99999_53850 NOTPDB CPL Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains--Molybdenum cofactor biosynthesis proteins--Molybdenum cofactor biosynthesis protein MoeA, C-terminal domain-- 50249_50249_50249_ 50249_50249_50249_ A_10 B_70 E_75 13_5_8 155 A_390 B_2734 E_1438 --A_390 B_2734 E_1438 --A_390 B_2734 E_1438 -- 52540_50249_endn_47661_99999 52540_55681_50249_48452_endc_46785_48439_99999 INPDB RPT Nucleic acid-binding proteins--Nucleic acid-binding proteins--Nucleic acid-binding proteins-- 54416_54416_49998_ 54416_54416_49998_ A_1 B_3 E_15 6_3_3 19 A_1 B_40 E_61 --A_1 B_40 E_61 --A_2 B_4 E_49 -- 55383_endn_99999 endc_51695_99999 INPDB RPT Copper amine oxidase, domains 1 and 2--Copper amine oxidase, domains 1 and 2--Copper amine oxidase, domain 3 (catalytic)-- 56059_48108_52440_ 56059_48108_52440_ A_12 B_85 E_21 4_2_2 118 A_192 B_1104 E_490 --A_16 B_93 E_27 --A_71 B_698 E_210 -- endn_52440 56059_endc INPDB CPL Glutathione synthetase ATP-binding domain-like--Carbamoyl phosphate synthetase, large subunit connection domain--PreATP-grasp domain-- 48452_48452_48452_ 48452_48452_48452_ A_1 B_16 E_87 11_6_5 104 A_146 B_1937 E_3442 --A_146 B_1937 E_3442 --A_146 B_1937 E_3442 -- 53383_endn_48452_55008_48439_99999 48452_57501_endc_48439_99999 NOTPDB RPT TPR-like--TPR-like--TPR-like-- 54631_54631_54631_ 54631_54631_54631_ A_55 B_6 E_47 7_4_3 108 A_209 B_782 E_239 --A_209 B_782 E_239 --A_209 B_782 E_239 -- endn_54631_54862_99999 54631_endc_99999 NOTPDB RPT CBS-domain--CBS-domain--CBS-domain-- 54980_54211_54980_ 54980_54211_54980_ A_15 B_144 E_75 5_3_2 234 A_28 B_403 E_157 --A_200 B_1096 E_669 --A_28 B_403 E_157 -- 52540_endn_50447 endc_99999 INPDB CPL EF-G/eEF-2 domains III and V--Ribosomal protein S5 domain 2-like--EF-G/eEF-2 domains III and V-- 48452_48452_48439_ 48452_48452_48439_ A_3 B_4 E_23 11_6_5 30 A_146 B_1937 E_3442 --A_146 B_1937 E_3442 --A_48 B_249 E_670 -- 47220_endn_82657_48452_48439_99999 52540_48452_endc_48439_99999 NOTPDB RPT TPR-like--TPR-like--Protein prenylyltransferase-- 63737_55486_48371_ 63737_55486_48371_ A_1 B_8 E_32 5_3_2 41 A_11 B_85 E_209 --A_64 B_735 E_1617 --A_73 B_255 E_3951 -- 53335_endn_99999 endc_99999 INPDB CPL Leukotriene A4 hydrolase N-terminal domain--Metalloproteases ("zincins"), catalytic domain--ARM repeat-- 56059_52009_51621_ 56059_52009_51621_ A_19 B_55 E_4 3_2_1 78 A_192 B_1104 E_490 --A_27 B_221 E_13 --A_75 B_609 E_182 -- endn_99999 endc INPDB CPL Glutathione synthetase ATP-binding domain-like--Phosphohistidine domain--Phosphoenolpyruvate/pyruvate domain-- 52317_52402_54810_ 52317_52402_54810_ A_1 B_83 E_7 3_2_1 91 A_204 B_1244 E_262 --A_350 B_1402 E_436 --A_13 B_87 E_19 -- endn_99999 endc INPDB CPL Class I glutamine amidotransferase-like--Adenine nucleotide alpha hydrolases-like--GMP synthetase C-terminal dimerisation domain-- 49299_49299_49299_ 49299_49299_49299_ A_32 B_2 E_11 20_14_6 45 A_103 B_31 E_55 --A_103 B_31 E_55 --A_103 B_31 E_55 -- endn_49299_50969_51126_47473_50998_50960_49373_82171_48726_49464_69318_50974_99999 50960_49299_endc_69318_50998_99999 NOTPDB RPT PKD domain--PKD domain--PKD domain-- 53067_53067_56778_ 53067_53067_56778_ A_9 B_142 E_186 8_4_4 337 A_176 B_1667 E_1029 --A_176 B_1667 E_1029 --A_14 B_148 E_238 -- 53067_endn_52058_99999 51126_53300_endc_99999 NOTPDB RPT Actin-like ATPase domain--Actin-like ATPase domain--Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment-- 53150_48334_52540_ 53150_48334_52540_ A_4 B_74 E_29 6_3_3 107 A_4 B_81 E_57 --A_8 B_135 E_96 --A_2129 B_14320 E_12913 -- endn_55271_99999 52540_endc_99999 INPDB CPL DNA repair protein MutS, domain II--DNA repair protein MutS, domain III--P-loop containing nucleotide triphosphate hydrolases-- 52540_50331_50331_ 52540_50331_50331_ A_1 B_6 E_2 4_2_2 9 A_2129 B_14320 E_12913 --A_61 B_521 E_45 --A_61 B_521 E_45 -- 52540_endn endc_51695 NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--MOP-like--MOP-like-- 51905_51905_55424_ 51905_51905_55424_ A_1 B_4 E_3 3_2_1 8 A_358 B_2910 E_1243 --A_358 B_2910 E_1243 --A_55 B_393 E_136 -- endn_99999 endc INPDB RPT FAD/NAD(P)-binding domain--FAD/NAD(P)-binding domain--FAD/NAD-linked reductases, dimerisation (C-terminal) domain-- 51230_47005_52777_ 51230_47005_52777_ A_5 B_137 E_32 5_3_2 174 A_35 B_1330 E_195 --A_6 B_185 E_52 --A_10 B_418 E_328 -- 51230_endn_99999 52777_endc NOTPDB CPL Single hybrid motif--Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex--CoA-dependent acyltransferases-- 50615_52540_47917_ 50615_52540_47917_ A_20 B_210 E_66 6_3_3 296 A_38 B_324 E_95 --A_2129 B_14320 E_12913 --A_49 B_235 E_120 -- endn_47917_99999 50615_endc_99999 INPDB CPL N-terminal domain of alpha and beta subunits of F1 ATP synthase--P-loop containing nucleotide triphosphate hydrolases--C-terminal domain of alpha and beta subunits of F1 ATP synthase-- 52440_56059_51246_ 52440_56059_51246_ A_31 B_344 E_88 14_4_10 463 A_71 B_698 E_210 --A_192 B_1104 E_490 --A_31 B_372 E_107 -- 51230_endn_48670_99999 51230_50729_51332_51735_endc_55154_51261_55326_52255_99999 INPDB CPL PreATP-grasp domain--Glutathione synthetase ATP-binding domain-like--Rudiment single hybrid motif-- 69742_51735_69075_ 69742_51735_69075_ A_13 B_55 E_3 4_2_2 71 A_13 B_64 E_6 --A_993 B_8798 E_3827 --A_15 B_57 E_7 -- endn_99999 endc_99999 INPDB CPL Glutamyl tRNA-reductase catalytic, N-terminal domain--NAD(P)-binding Rossmann-fold domains--Glutamyl tRNA-reductase dimerization domain-- 53383_52540_52540_ 53383_52540_52540_ A_1 B_1 E_3 4_1_3 5 A_367 B_2974 E_1139 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn 52540_52058_endc NOTPDB RPT PLP-dependent transferases--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 51735_48179_48179_ 51735_48179_48179_ A_15 B_77 E_28 6_4_2 120 A_993 B_8798 E_3827 --A_71 B_674 E_226 --A_71 B_674 E_226 -- 53335_52096_endn_99999 52096_endc NOTPDB RPT NAD(P)-binding Rossmann-fold domains--6-phosphogluconate dehydrogenase C-terminal domain-like--6-phosphogluconate dehydrogenase C-terminal domain-like-- 81271_55186_55681_ 81271_55186_55681_ A_1 B_78 E_24 4_2_2 103 A_25 B_298 E_67 --A_42 B_237 E_81 --A_205 B_1250 E_450 -- endn_99999 52954_endc INPDB CPL TGS-like--Threonyl-tRNA synthetase (ThrRS), second 'additional' domain--Class II aaRS and biotin synthetases-- 55874_52172_52172_ 55874_52172_52172_ A_2 B_64 E_3 7_3_4 69 A_178 B_2970 E_398 --A_85 B_3166 E_241 --A_85 B_3166 E_241 -- endn_47384_99999 47226_46894_52172_endc NOTPDB RPT ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase--CheY-like--CheY-like-- 46565_57938_49493_ 46565_57938_49493_ A_4 B_25 E_68 5_2_3 97 A_12 B_326 E_827 --A_19 B_61 E_147 --A_8 B_140 E_172 -- endn_99999 49493_endc_99999 NOTPDB CPL Chaperone J-domain--Cysteine-rich domain of the chaperone protein DnaJ.--HSP40/DnaJ peptide-binding domain-- 81653_81665_56784_ 81653_81665_56784_ A_25 B_243 E_46 8_3_5 314 A_48 B_376 E_513 --A_43 B_361 E_378 --A_230 B_1745 E_1267 -- endn_52172_99999 53383_55008_endc_81665_99999 NOTPDB CPL Calcium ATPase, transduction domain A--Calcium ATPase, transmembrane domain M--HAD-like-- 55271_53150_48334_ 55271_53150_48334_ A_2 B_72 E_3 4_2_2 77 A_4 B_79 E_36 --A_4 B_81 E_57 --A_8 B_135 E_96 -- endn_99999 52540_endc INPDB CPL DNA repair protein MutS, domain I--DNA repair protein MutS, domain II--DNA repair protein MutS, domain III-- 55785_47384_55874_ 55785_47384_55874_ A_26 B_438 E_16 16_11_5 480 A_168 B_1284 E_394 --A_45 B_1750 E_74 --A_178 B_2970 E_398 -- 46966_endn_56849_46579_55781_53474_52172_48317_99999_53850_55785 53271_52172_endc_53850_99999 NOTPDB CPL PYP-like sensor domain (PAS domain)--Homodimeric domain of signal transducing histidine kinase--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 56037_46955_55681_ 56037_46955_55681_ A_17 B_83 E_18 6_3_3 118 A_22 B_111 E_25 --A_55 B_784 E_148 --A_205 B_1250 E_450 -- 50249_endn_46955 endc_99999_54991 INPDB CPL B3/B4 domain of PheRS, PheT--Putative DNA-binding domain--Class II aaRS and biotin synthetases-- 47384_55874_52172_ 47384_55874_52172_ A_3 B_334 E_6 18_9_9 343 A_45 B_1750 E_74 --A_178 B_2970 E_398 --A_85 B_3166 E_241 -- endn_50998_81648_47226_55781_52172_99999_55785_53850 63411_47226_52172_48283_47384_endc_55073_99999_55874 NOTPDB CPL Homodimeric domain of signal transducing histidine kinase--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase--CheY-like-- 47648_52418_54680_ 47648_52418_54680_ A_8 B_47 E_3 4_3_1 58 A_24 B_152 E_15 --A_27 B_155 E_18 --A_13 B_58 E_12 -- endn_50692_99999 endc INPDB CPL Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain--Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain--Pyrimidine nucleoside phosphorylase C-terminal domain-- 82861_50182_82689_ 82861_50182_82689_ A_28 B_161 E_3 8_4_4 192 A_40 B_181 E_12 --A_84 B_323 E_404 --A_35 B_209 E_8 -- 47986_endn_48019_99999 51206_53474_endc_99999 INPDB CPL Mechanosensitive channel protein MscS (YggB), transmembrane region--Sm-like ribonucleoproteins--Mechanosensitive channel protein MscS (YggB), C-terminal domain-- 52540_46785_52540_ 52540_46785_52540_ A_5 B_15 E_1 5_3_2 21 A_2129 B_14320 E_12913 --A_1241 B_7979 E_2143 --A_2129 B_14320 E_12913 -- 52540_endn_99999 endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--"Winged helix" DNA-binding domain--P-loop containing nucleotide triphosphate hydrolases-- 46785_46785_46785_ 46785_46785_46785_ A_2 B_11 E_4 5_2_3 17 A_1241 B_7979 E_2143 --A_1241 B_7979 E_2143 --A_1241 B_7979 E_2143 -- endn_99999 55681_endc_99999 INPDB RPT "Winged helix" DNA-binding domain--"Winged helix" DNA-binding domain--"Winged helix" DNA-binding domain-- 55681_52954_64586_ 55681_52954_64586_ A_16 B_17 E_18 5_4_1 51 A_205 B_1250 E_450 --A_75 B_353 E_158 --A_16 B_17 E_21 -- endn_47060_55826_99999 endc INPDB CPL Class II aaRS and biotin synthetases--Anticodon-binding domain of Class II aaRS--C-terminal domain of ProRS-- 48439_48452_48452_ 48439_48452_48452_ A_5 B_1 E_8 8_4_4 14 A_48 B_249 E_670 --A_146 B_1937 E_3442 --A_146 B_1937 E_3442 -- endn_48452_48439_99999 48452_endc_99999_48439 NOTPDB RPT Protein prenylyltransferase--TPR-like--TPR-like-- 49265_49265_49265_ 49265_49265_49265_ A_2 B_6 E_507 22_13_9 515 A_23 B_135 E_1734 --A_23 B_135 E_1734 --A_23 B_135 E_1734 -- 57196_53383_endn_81296_57603_51621_57256_48726_50965_57016_53300_49265_99999 51126_57603_49899_48726_53300_56496_endc_99999_49265 INPDB RPT Fibronectin type III--Fibronectin type III--Fibronectin type III-- 55785_55785_55785_ 55785_55785_55785_ A_53 B_113 E_6 15_8_7 172 A_168 B_1284 E_394 --A_168 B_1284 E_394 --A_168 B_1284 E_394 -- endn_54631_46579_55781_52172_53850_55785_99999 46894_55781_endc_47384_55073_55785_99999 NOTPDB RPT PYP-like sensor domain (PAS domain)--PYP-like sensor domain (PAS domain)--PYP-like sensor domain (PAS domain)-- 54292_54862_53706_ 54292_54862_53706_ A_5 B_54 E_15 4_2_2 74 A_44 B_565 E_187 --A_411 B_743 E_103 --A_63 B_328 E_38 -- endn_99999 endc_50692 NOTPDB CPL 2Fe-2S ferredoxin-like--4Fe-4S ferredoxins--Formate dehydrogenase/DMSO reductase, domains 1-3-- 52440_56059_48108_ 52440_56059_48108_ A_12 B_87 E_21 6_3_3 120 A_71 B_698 E_210 --A_192 B_1104 E_490 --A_16 B_93 E_27 -- endn_52317_99999 52440_endc_99999 INPDB CPL PreATP-grasp domain--Glutathione synthetase ATP-binding domain-like--Carbamoyl phosphate synthetase, large subunit connection domain-- 48108_52440_56059_ 48108_52440_56059_ A_13 B_86 E_21 6_2_4 120 A_16 B_93 E_27 --A_71 B_698 E_210 --A_192 B_1104 E_490 -- endn_56059 endc_52335_51735_99999 INPDB CPL Carbamoyl phosphate synthetase, large subunit connection domain--PreATP-grasp domain--Glutathione synthetase ATP-binding domain-like-- 51905_54373_51735_ 51905_54373_51735_ A_2 B_8 E_3 3_2_1 13 A_358 B_2910 E_1243 --A_16 B_381 E_311 --A_993 B_8798 E_3827 -- endn_99999 endc NOTPDB CPL FAD/NAD(P)-binding domain--FAD-linked reductases, C-terminal domain--NAD(P)-binding Rossmann-fold domains-- 50800_51621_52935_ 50800_51621_52935_ A_13 B_108 E_57 6_3_3 178 A_21 B_142 E_93 --A_75 B_609 E_182 --A_19 B_116 E_66 -- endn_53187_99999 52009_endc_99999 INPDB CPL PK beta-barrel domain-like--Phosphoenolpyruvate/pyruvate domain--Pyruvate kinase, C-terminal domain-- 53738_53738_53738_ 53738_53738_53738_ A_32 B_249 E_66 10_6_4 347 A_38 B_288 E_93 --A_38 B_288 E_93 --A_38 B_288 E_93 -- 54637_53738_endn_81799_51161_99999 53738_55957_53271_99999 INPDB RPT Phosphoglucomutase, first 3 domains--Phosphoglucomutase, first 3 domains--Phosphoglucomutase, first 3 domains-- 52540_52540_46785_ 52540_52540_46785_ A_2 B_5 E_1 5_1_4 8 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --A_1241 B_7979 E_2143 -- endn 52540_endc_47781_99999 NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--"Winged helix" DNA-binding domain-- 57783_57783_57783_ 57783_57783_57783_ A_1 B_39 E_1 6_3_3 41 A_193 B_620 E_393 --A_193 B_620 E_393 --A_193 B_620 E_393 -- endn_56712_99999 endc_52255_99999 NOTPDB RPT Zinc beta-ribbon--Zinc beta-ribbon--Zinc beta-ribbon-- 51735_52210_52210_ 51735_52210_52210_ A_31 B_55 E_1 6_3_3 87 A_993 B_8798 E_3827 --A_60 B_218 E_78 --A_60 B_218 E_78 -- endn_56059_55729 56059_endc_99999 NOTPDB RPT NAD(P)-binding Rossmann-fold domains--Succinyl-CoA synthetase domains--Succinyl-CoA synthetase domains-- AB 44 52540_46785_52980_ 52540_46785_52980_ A_27 B_3 3_1_2 30 A_2129 B_14320 E_12913 --A_1241 B_7979 E_2143 --A_117 B_308 E_46 -- endn 52540_endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--"Winged helix" DNA-binding domain--Restriction endonuclease-like-- 52738_47757_53335_ 52738_47757_53335_ A_2 B_6 5_3_2 8 A_10 B_81 E_5 --A_10 B_83 E_5 --A_733 B_3918 E_2070 -- endn_55785_99999 endc_99999 NOTPDB CPL Methylesterase CheB, C-terminal domain--Chemotaxis receptor methyltransferase CheR, N-terminal domain--S-adenosyl-L-methionine-dependent methyltransferases-- 46785_55681_50037_ 46785_55681_50037_ A_4 B_40 3_2_1 44 A_1241 B_7979 E_2143 --A_205 B_1250 E_450 --A_36 B_160 E_9 -- endn_99999 endc INPDB CPL "Winged helix" DNA-binding domain--Class II aaRS and biotin synthetases--C-terminal domain of transcriptional repressors-- 54292_46548_53706_ 54292_46548_53706_ A_1 B_6 4_2_2 7 A_44 B_565 E_187 --A_125 B_477 E_67 --A_63 B_328 E_38 -- endn_99999 endc_50692 NOTPDB CPL 2Fe-2S ferredoxin-like--alpha-helical ferredoxin--Formate dehydrogenase/DMSO reductase, domains 1-3-- 53633_55021_55021_ 53633_55021_55021_ A_3 B_30 3_1_2 33 A_84 B_449 E_69 --A_109 B_662 E_147 --A_109 B_662 E_147 -- endn 55021_endc NOTPDB RPT Carbamate kinase-like--Regulatory domain in the aminoacid metabolism--Regulatory domain in the aminoacid metabolism-- 56059_51246_51261_ 56059_51246_51261_ A_1 B_9 3_2_1 10 A_192 B_1104 E_490 --A_31 B_372 E_107 --A_11 B_271 E_40 -- endn_52440 endc NOTPDB CPL Glutathione synthetase ATP-binding domain-like--Rudiment single hybrid motif--Duplicated hybrid motif-- 53795_54631_54631_ 53795_54631_54631_ A_3 B_35 5_2_3 38 A_421 B_3843 E_485 --A_209 B_782 E_239 --A_209 B_782 E_239 -- endn_99999 54791_endc_99999 NOTPDB RPT PEP carboxykinase-like--CBS-domain--CBS-domain-- 55785_55781_55781_ 55785_55781_55781_ A_1 B_10 6_3_3 11 A_168 B_1284 E_394 --A_54 B_1030 E_131 --A_54 B_1030 E_131 -- 55874_99999_55785 47384_99999_55785 NOTPDB RPT PYP-like sensor domain (PAS domain)--GAF domain-like--GAF domain-like-- 52374_47323_50249_ 52374_47323_50249_ A_11 B_49 5_3_2 60 A_247 B_1540 E_642 --A_100 B_688 E_246 --A_390 B_2734 E_1438 -- 57770_endn_99999 endc_99999 NOTPDB CPL Nucleotidylyl transferase--Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases--Nucleic acid-binding proteins-- 47384_55874_50341_ 47384_55874_50341_ A_8 B_61 8_4_4 69 A_45 B_1750 E_74 --A_178 B_2970 E_398 --A_19 B_255 E_17 -- 47226_endn_55052_99999 50341_52172_endc_99999 INPDB CPL Homodimeric domain of signal transducing histidine kinase--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase--CheW-like-- 55124_56014_54862_ 55124_56014_54862_ A_5 B_5 4_2_2 10 A_24 B_104 E_14 --A_25 B_194 E_20 --A_411 B_743 E_103 -- endn_99999 endc_99999 NOTPDB CPL Sulfite reductase, domains 1 and 3--Sulfite reductase hemoprotein (SiRHP), domains 2 and 4--4Fe-4S ferredoxins-- 55781_55785_55781_ 55781_55785_55781_ A_4 B_10 8_4_4 14 A_54 B_1030 E_131 --A_168 B_1284 E_394 --A_54 B_1030 E_131 -- endn_55781_99999_55785 81606_47384_99999_55785 NOTPDB CPL GAF domain-like--PYP-like sensor domain (PAS domain)--GAF domain-like-- 55785_55781_55785_ 55785_55781_55785_ A_8 B_14 12_6_6 22 A_168 B_1284 E_394 --A_54 B_1030 E_131 --A_168 B_1284 E_394 -- endn_55781_52172_53850_55785_99999 55781_endc_47384_55073_55785_99999 NOTPDB CPL PYP-like sensor domain (PAS domain)--GAF domain-like--PYP-like sensor domain (PAS domain)-- 51445_51011_81296_ 51445_51011_81296_ A_1 B_1 3_1_2 2 A_89 B_1646 E_1474 --A_17 B_377 E_212 --A_40 B_404 E_1207 -- endn 49452_99999 INPDB CPL (Trans)glycosidases--alpha-Amylases, C-terminal beta-sheet domain--E set domains-- 52540_52540_52980_ 52540_52540_52980_ A_1 B_3 3_2_1 4 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --A_117 B_308 E_46 -- endn_99999 endc NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--Restriction endonuclease-like-- 57802_52540_52540_ 57802_52540_52540_ A_1 B_12 4_2_2 13 A_77 B_171 E_177 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn_99999 endc_99999 NOTPDB RPT Rubredoxin-like--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 52540_51294_52540_ 52540_51294_52540_ A_2 B_1 5_2_3 3 A_2129 B_14320 E_12913 --A_61 B_50 E_53 --A_2129 B_14320 E_12913 -- endn_99999 54752_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Hedgehog/intein (Hint) domain--P-loop containing nucleotide triphosphate hydrolases-- 53756_53756_53756_ 53756_53756_53756_ A_1 B_2 3_2_1 3 A_262 B_1575 E_1122 --A_262 B_1575 E_1122 --A_262 B_1575 E_1122 -- endn_53335 endc NOTPDB RPT UDP-Glycosyltransferase/glycogen phosphorylase--UDP-Glycosyltransferase/glycogen phosphorylase--UDP-Glycosyltransferase/glycogen phosphorylase-- 55781_55785_55785_ 55781_55785_55785_ A_11 B_22 12_5_7 33 A_54 B_1030 E_131 --A_168 B_1284 E_394 --A_168 B_1284 E_394 -- endn_52172_48452_55785_99999 55781_47384_endc_55073_55874_99999_55785 NOTPDB RPT GAF domain-like--PYP-like sensor domain (PAS domain)--PYP-like sensor domain (PAS domain)-- 52172_55785_55781_ 52172_55785_55781_ A_5 B_2 6_3_3 7 A_85 B_3166 E_241 --A_168 B_1284 E_394 --A_54 B_1030 E_131 -- 47226_endn_52172 endc_99999_55785 NOTPDB CPL CheY-like--PYP-like sensor domain (PAS domain)--GAF domain-like-- 46785_52540_52540_ 46785_52540_52540_ A_3 B_4 4_3_1 7 A_1241 B_7979 E_2143 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn_46785_99999 endc NOTPDB RPT "Winged helix" DNA-binding domain--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 52440_56059_51735_ 52440_56059_51735_ A_5 B_3 3_2_1 8 A_71 B_698 E_210 --A_192 B_1104 E_490 --A_993 B_8798 E_3827 -- endn_48108 endc NOTPDB CPL PreATP-grasp domain--Glutathione synthetase ATP-binding domain-like--NAD(P)-binding Rossmann-fold domains-- 52507_51735_51735_ 52507_51735_51735_ A_1 B_9 3_2_1 10 A_47 B_152 E_29 --A_993 B_8798 E_3827 --A_993 B_8798 E_3827 -- endn_99999 endc NOTPDB RPT DFP DNA/pantothenate metabolism flavoprotein--NAD(P)-binding Rossmann-fold domains--NAD(P)-binding Rossmann-fold domains-- 54862_54862_54862_ 54862_54862_54862_ A_3 B_2 5_2_3 5 A_411 B_743 E_103 --A_411 B_743 E_103 --A_411 B_743 E_103 -- endn_46548 endc_99999_51971 NOTPDB RPT 4Fe-4S ferredoxins--4Fe-4S ferredoxins--4Fe-4S ferredoxins-- 51905_55424_52821_ 51905_55424_52821_ A_1 B_16 4_2_2 17 A_358 B_2910 E_1243 --A_55 B_393 E_136 --A_39 B_452 E_298 -- endn_99999 endc_64307 NOTPDB CPL FAD/NAD(P)-binding domain--FAD/NAD-linked reductases, dimerisation (C-terminal) domain--Rhodanese/Cell cycle control phosphatase-- 47413_51182_53335_ 47413_51182_53335_ A_2 B_1 3_1_2 3 A_123 B_1973 E_199 --A_107 B_1063 E_385 --A_733 B_3918 E_2070 -- endn endc_99999 NOTPDB CPL lambda repressor-like DNA-binding domains--RmlC-like cupins--S-adenosyl-L-methionine-dependent methyltransferases-- 46785_47979_50037_ 46785_47979_50037_ A_9 B_25 4_1_3 34 A_1241 B_7979 E_2143 --A_31 B_55 E_1 --A_36 B_160 E_9 -- endn 50037_endc_99999 INPDB CPL "Winged helix" DNA-binding domain--Iron-dependent represor protein, dimerization domain--C-terminal domain of transcriptional repressors-- 52172_55785_55785_ 52172_55785_55785_ A_6 B_12 7_1_6 18 A_85 B_3166 E_241 --A_168 B_1284 E_394 --A_168 B_1284 E_394 -- endn 55781_endc_47384_55073_99999_55785 NOTPDB RPT CheY-like--PYP-like sensor domain (PAS domain)--PYP-like sensor domain (PAS domain)-- 52540_52540_56712_ 52540_52540_56712_ A_9 B_3 4_2_2 12 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --A_33 B_243 E_47 -- 51294_endn endc_99999 INPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--Prokaryotic type I DNA topoisomerase-- 55874_52172_47226_ 55874_52172_47226_ A_1 B_55 5_2_3 56 A_178 B_2970 E_398 --A_85 B_3166 E_241 --A_9 B_246 E_33 -- 47384_99999 47226_endc_99999 NOTPDB CPL ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase--CheY-like--Histidine-containing phosphotransfer domain, HPT domain-- 55124_54862_56014_ 55124_54862_56014_ A_4 B_1 3_2_1 5 A_24 B_104 E_14 --A_411 B_743 E_103 --A_25 B_194 E_20 -- endn_99999 endc NOTPDB CPL Sulfite reductase, domains 1 and 3--4Fe-4S ferredoxins--Sulfite reductase hemoprotein (SiRHP), domains 2 and 4-- 55785_55781_47384_ 55785_55781_47384_ A_2 B_17 6_4_2 19 A_168 B_1284 E_394 --A_54 B_1030 E_131 --A_45 B_1750 E_74 -- endn_55781_99999_55785 99999_55874 NOTPDB CPL PYP-like sensor domain (PAS domain)--GAF domain-like--Homodimeric domain of signal transducing histidine kinase-- 55785_55785_55781_ 55785_55785_55781_ A_11 B_37 15_7_8 48 A_168 B_1284 E_394 --A_168 B_1284 E_394 --A_54 B_1030 E_131 -- endn_55781_81606_52172_64501_99999_55785 endc_47384_55073_75625_55781_81606_99999_55785 NOTPDB RPT PYP-like sensor domain (PAS domain)--PYP-like sensor domain (PAS domain)--GAF domain-like-- 46785_54909_46785_ 46785_54909_46785_ A_2 B_3 3_1_2 5 A_1241 B_7979 E_2143 --A_113 B_586 E_39 --A_1241 B_7979 E_2143 -- endn 54909_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Dimeric alpha+beta barrel--"Winged helix" DNA-binding domain-- 56712_57783_57783_ 56712_57783_57783_ A_5 B_28 4_1_3 33 A_33 B_243 E_47 --A_193 B_620 E_393 --A_193 B_620 E_393 -- endn 57783_endc_99999 NOTPDB RPT Prokaryotic type I DNA topoisomerase--Zinc beta-ribbon--Zinc beta-ribbon-- 47802_47781_81301_ 47802_47781_81301_ A_6 B_14 5_3_2 20 A_30 B_54 E_72 --A_49 B_595 E_68 --A_169 B_325 E_254 -- 52540_endn_51905 51735_99999 NOTPDB CPL DNA polymerase beta, N-terminal domain-like--RuvA domain 2-like--Nucleotidyltransferase-- 46548_53706_50692_ 46548_53706_50692_ A_1 B_7 4_2_2 8 A_125 B_477 E_67 --A_63 B_328 E_38 --A_113 B_397 E_88 -- 54292_51971 endc_99999 NOTPDB CPL alpha-helical ferredoxin--Formate dehydrogenase/DMSO reductase, domains 1-3--ADC-like-- 54862_53706_50692_ 54862_53706_50692_ A_5 B_33 4_2_2 38 A_411 B_743 E_103 --A_63 B_328 E_38 --A_113 B_397 E_88 -- 54292_51971 endc_99999 NOTPDB CPL 4Fe-4S ferredoxins--Formate dehydrogenase/DMSO reductase, domains 1-3--ADC-like-- 52540_52540_46600_ 52540_52540_46600_ A_5 B_92 5_3_2 97 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --A_10 B_212 E_6 -- 53335_endn_99999 endc_99999 NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--C-terminal UvrC-binding domain of UvrB-- 46894_55608_55608_ 46894_55608_55608_ A_1 B_2 3_1_2 3 A_87 B_1032 E_48 --A_42 B_71 E_32 --A_42 B_71 E_32 -- endn endc_99999 NOTPDB RPT C-terminal effector domain of the bipartite response regulators--Homing endonucleases--Homing endonucleases-- 52540_53795_52540_ 52540_53795_52540_ A_1 B_2 4_2_2 3 A_2129 B_14320 E_12913 --A_421 B_3843 E_485 --A_2129 B_14320 E_12913 -- endn_99999 endc_82653 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--PEP carboxykinase-like--P-loop containing nucleotide triphosphate hydrolases-- 53850_55785_55785_ 53850_55785_55785_ A_1 B_4 3_1_2 5 A_257 B_5627 E_740 --A_168 B_1284 E_394 --A_168 B_1284 E_394 -- endn 55785_99999 NOTPDB RPT Periplasmic binding protein-like II--PYP-like sensor domain (PAS domain)--PYP-like sensor domain (PAS domain)-- 55785_55785_55874_ 55785_55785_55874_ A_4 B_2 5_4_1 6 A_168 B_1284 E_394 --A_168 B_1284 E_394 --A_178 B_2970 E_398 -- endn_55781_55785_99999 endc NOTPDB RPT PYP-like sensor domain (PAS domain)--PYP-like sensor domain (PAS domain)--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 56176_55103_46548_ 56176_55103_46548_ A_4 B_31 4_2_2 35 A_43 B_454 E_248 --A_31 B_249 E_105 --A_125 B_477 E_67 -- endn_99999 53383_99999 NOTPDB CPL FAD-binding domain--FAD-linked oxidases, C-terminal domain--alpha-helical ferredoxin-- AC 16 55486_54631_54631_ 55486_54631_54631_ A_1 E_4 3_1_2 5 A_64 B_735 E_1617 --A_209 B_782 E_239 --A_209 B_782 E_239 -- endn endc_99999 NOTPDB RPT Metalloproteases ("zincins"), catalytic domain--CBS-domain--CBS-domain-- 81333_81333_81333_ 81333_81333_81333_ A_2 E_1 4_2_2 3 A_21 B_111 E_114 --A_21 B_111 E_114 --A_21 B_111 E_114 -- endn_81333 endc_81333 NOTPDB RPT F1F0 ATP synthase subunit C--F1F0 ATP synthase subunit C--F1F0 ATP synthase subunit C-- 50692_54585_52540_ 50692_54585_52540_ A_31 E_42 5_2_3 73 A_113 B_397 E_88 --A_42 B_8 E_91 --A_2129 B_14320 E_12913 -- endn_99999 52540_endc_99999 INPDB CPL ADC-like--Cdc48 domain 2-like--P-loop containing nucleotide triphosphate hydrolases-- 54585_52540_52540_ 54585_52540_52540_ A_31 E_43 6_3_3 74 A_42 B_8 E_91 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- 52540_99999_50692 52540_endc_99999 NOTPDB RPT Cdc48 domain 2-like--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 55874_46946_54211_ 55874_46946_54211_ A_13 E_2 4_2_2 15 A_178 B_2970 E_398 --A_48 B_219 E_75 --A_200 B_1096 E_669 -- endn_99999 endc_99999 INPDB CPL ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase--S13-like H2TH domain--Ribosomal protein S5 domain 2-like-- 54862_52540_52540_ 54862_52540_52540_ A_4 E_3 4_1_3 7 A_411 B_743 E_103 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn 52540_endc_99999 NOTPDB RPT 4Fe-4S ferredoxins--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 48452_48439_48439_ 48452_48439_48439_ A_3 E_1 6_3_3 4 A_146 B_1937 E_3442 --A_48 B_249 E_670 --A_48 B_249 E_670 -- endn_48452_99999 48452_endc_48439 NOTPDB RPT TPR-like--Protein prenylyltransferase--Protein prenylyltransferase-- 51735_52540_52540_ 51735_52540_52540_ A_3 E_1 4_2_2 4 A_993 B_8798 E_3827 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn_99999 53271_endc NOTPDB RPT NAD(P)-binding Rossmann-fold domains--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 51905_51905_54373_ 51905_51905_54373_ A_1 E_1 4_2_2 2 A_358 B_2910 E_1243 --A_358 B_2910 E_1243 --A_16 B_381 E_311 -- endn_99999 endc_99999 NOTPDB RPT FAD/NAD(P)-binding domain--FAD/NAD(P)-binding domain--FAD-linked reductases, C-terminal domain-- 55608_55608_52540_ 55608_55608_52540_ A_1 E_1 4_2_2 2 A_42 B_71 E_32 --A_42 B_71 E_32 --A_2129 B_14320 E_12913 -- 51294_99999 47917_48019 NOTPDB RPT Homing endonucleases--Homing endonucleases--P-loop containing nucleotide triphosphate hydrolases-- 53098_56672_53098_ 53098_56672_53098_ A_1 E_1 4_2_2 2 A_290 B_2494 E_2335 --A_66 B_378 E_3164 --A_290 B_2494 E_2335 -- endn_99999 endc_99999 NOTPDB CPL Ribonuclease H-like--DNA/RNA polymerases--Ribonuclease H-like-- 51294_55608_55608_ 51294_55608_55608_ A_7 E_1 7_2_5 8 A_61 B_50 E_53 --A_42 B_71 E_32 --A_42 B_71 E_32 -- endn_99999 52540_47413_51998_54786_99999 INPDB RPT Hedgehog/intein (Hint) domain--Homing endonucleases--Homing endonucleases-- 52540_81271_52540_ 52540_81271_52540_ A_1 E_1 3_2_1 2 A_2129 B_14320 E_12913 --A_25 B_298 E_67 --A_2129 B_14320 E_12913 -- endn_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--TGS-like--P-loop containing nucleotide triphosphate hydrolases-- 57783_47954_47954_ 57783_47954_47954_ A_26 E_38 4_2_2 64 A_193 B_620 E_393 --A_52 B_42 E_726 --A_52 B_42 E_726 -- endn_99999 endc_99999 NOTPDB RPT Zinc beta-ribbon--Cyclin-like--Cyclin-like-- 55481_53137_55315_ 55481_53137_55315_ A_18 E_26 3_1_2 44 A_20 E_26 --A_72 B_204 E_155 --A_69 B_239 E_475 -- endn endc_99999 INPDB CPL N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1--Translational machinery components--L30e-like-- 48439_48452_48439_ 48439_48452_48439_ A_1 E_2 4_2_2 3 A_48 B_249 E_670 --A_146 B_1937 E_3442 --A_48 B_249 E_670 -- endn_48452 endc_99999 NOTPDB CPL Protein prenylyltransferase--TPR-like--Protein prenylyltransferase-- BC 117 47473_47473_47473_ 47473_47473_47473_ B_1 E_15 6_3_3 16 A_51 B_190 E_2808 --A_51 B_190 E_2808 --A_51 B_190 E_2808 -- endn_47473_99999 endc_47473_99999 NOTPDB RPT EF-hand--EF-hand--EF-hand-- 51445_49785_49785_ 51445_49785_49785_ B_2 E_20 4_2_2 22 A_89 B_1646 E_1474 --A_10 B_366 E_724 --A_10 B_366 E_724 -- endn_48113 endc_99999 NOTPDB RPT (Trans)glycosidases--Galactose-binding domain-like--Galactose-binding domain-like-- 51735_52210_48256_ 51735_52210_48256_ B_1 E_19 3_2_1 20 A_993 B_8798 E_3827 --A_60 B_218 E_78 --A_19 B_129 E_63 -- 52210_endn endc NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Succinyl-CoA synthetase domains--Citrate synthase-- 52777_56801_47336_ 52777_56801_47336_ B_80 E_4 7_3_4 84 A_10 B_418 E_328 --A_139 B_882 E_563 --A_4 B_486 E_88 -- endn_52777_99999 52777_53474_endc_99999 NOTPDB CPL CoA-dependent acyltransferases--Firefly luciferase-like--ACP-like-- 81901_81901_48452_ 81901_81901_48452_ B_1 E_1 4_2_2 2 B_153 E_123 --B_153 E_123 --A_146 B_1937 E_3442 -- endn_99999 endc_99999 NOTPDB RPT Cysteine rich protein B (HcpB)--Cysteine rich protein B (HcpB)--TPR-like-- 52540_81767_52540_ 52540_81767_52540_ B_112 E_4 6_3_3 116 A_2129 B_14320 E_12913 --B_114 E_8 --A_2129 B_14320 E_12913 -- endn_50978_99999 81886_endc_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--Pre-protein croslinking domain of SecA--P-loop containing nucleotide triphosphate hydrolases-- 51735_51735_51735_ 51735_51735_51735_ B_12 E_2 7_4_3 14 A_993 B_8798 E_3827 --A_993 B_8798 E_3827 --A_993 B_8798 E_3827 -- 50129_endn_51905_99999 47336_endc_99999 NOTPDB RPT NAD(P)-binding Rossmann-fold domains--NAD(P)-binding Rossmann-fold domains--NAD(P)-binding Rossmann-fold domains-- 51126_51126_51126_ 51126_51126_51126_ B_3 E_2 6_3_3 5 A_116 B_481 E_444 --A_116 B_481 E_444 --A_116 B_481 E_444 -- 51126_endn_99999 51126_endc_99999 NOTPDB RPT Pectin lyase-like--Pectin lyase-like--Pectin lyase-like-- 57903_52540_52540_ 57903_52540_52540_ B_5 E_1 4_2_2 6 A_56 B_38 E_1435 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn_99999 endc_99999 NOTPDB RPT FYVE/PHD zinc finger--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 51735_55347_69055_ 51735_55347_69055_ B_78 E_3 3_2_1 81 A_993 B_8798 E_3827 --A_119 B_836 E_588 --B_78 E_4 -- endn_99999 endc INPDB CPL NAD(P)-binding Rossmann-fold domains--Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain--1-deoxy-D-xylulose-5-phosphate reductoisomerase, C-terminal domain-- 55021_55021_55021_ 55021_55021_55021_ B_5 E_1 4_2_2 6 A_109 B_662 E_147 --A_109 B_662 E_147 --A_109 B_662 E_147 -- 53633_99999 55021_99999 NOTPDB RPT Regulatory domain in the aminoacid metabolism--Regulatory domain in the aminoacid metabolism--Regulatory domain in the aminoacid metabolism-- 51905_54373_51905_ 51905_54373_51905_ B_1 E_1 4_2_2 2 A_358 B_2910 E_1243 --A_16 B_381 E_311 --A_358 B_2910 E_1243 -- endn_99999 endc_99999 NOTPDB CPL FAD/NAD(P)-binding domain--FAD-linked reductases, C-terminal domain--FAD/NAD(P)-binding domain-- 52540_52540_82653_ 52540_52540_82653_ B_3 E_2 3_2_1 5 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --B_5 E_5 -- endn_99999 endc INPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--Probable GTPase Der, C-terminal domain-- 50494_50156_50156_ 50494_50156_50156_ B_79 E_3 8_6_2 82 A_19 B_482 E_1600 --A_28 B_534 E_1380 --A_28 B_534 E_1380 -- endn_52518_52440_55961_47240_99999 endc_99999 INPDB RPT Trypsin-like serine proteases--PDZ domain-like--PDZ domain-like-- 82714_82693_82866_ 82714_82693_82866_ B_40 E_1 4_2_2 41 B_354 E_19 --A_3 B_362 E_31 --A_45 B_639 E_196 -- 82693_99999 endc_99999 NOTPDB CPL Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains--Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains--Multidrug efflux transporter AcrB transmembrane domain-- 49313_49313_49313_ 49313_49313_49313_ B_3 E_546 8_5_3 549 A_3 B_17 E_754 --A_3 B_17 E_754 --A_3 B_17 E_754 -- endn_57184_51735_49313_99999 endc_49313_99999 INPDB RPT Cadherin--Cadherin--Cadherin-- 50969_50978_63825_ 50969_50978_63825_ B_1 E_2 4_2_2 3 A_24 B_218 E_336 --A_7 B_101 E_3576 --A_7 B_35 E_205 -- endn_99999 50960_99999 NOTPDB CPL YVTN repeat-like/Quinoprotein amine dehydrogenase--WD40-repeat--Low density lipoprotein (LDL) receptor YWTD domain-- 56801_47336_52777_ 56801_47336_52777_ B_40 E_4 5_3_2 44 A_139 B_882 E_563 --A_4 B_486 E_88 --A_10 B_418 E_328 -- endn_52777_99999 52777_endc NOTPDB CPL Firefly luciferase-like--ACP-like--CoA-dependent acyltransferases-- 46955_55681_54991_ 46955_55681_54991_ B_81 E_1 4_3_1 82 A_55 B_784 E_148 --A_205 B_1250 E_450 --A_1 B_97 E_27 -- endn_56037_99999 endc INPDB CPL Putative DNA-binding domain--Class II aaRS and biotin synthetases--Anticodon-binding domain of PheRS-- 46626_46626_46626_ 46626_46626_46626_ B_38 E_2 9_5_4 40 A_40 B_894 E_220 --A_40 B_894 E_220 --A_40 B_894 E_220 -- endn_56003_46785_47741_99999 46626_endc_48695_99999 NOTPDB RPT Cytochrome c--Cytochrome c--Cytochrome c-- 53041_47807_53098_ 53041_47807_53098_ B_79 E_1 4_2_2 80 A_60 B_294 E_160 --A_34 B_131 E_87 --A_290 B_2494 E_2335 -- endn_99999 56672_endc INPDB CPL Resolvase-like--5' to 3' exonuclease, C-terminal subdomain--Ribonuclease H-like-- 46458_63380_52343_ 46458_63380_52343_ B_36 E_4 4_2_2 40 A_8 B_250 E_257 --A_34 B_499 E_327 --A_34 B_384 E_315 -- endn_99999 48726_endc INPDB CPL Globin-like--Riboflavin synthase domain-like--Ferredoxin reductase-like, C-terminal NADP-linked domain-- 81296_81296_81296_ 81296_81296_81296_ B_6 E_67 11_8_3 73 A_40 B_404 E_1207 --A_40 B_404 E_1207 --A_40 B_404 E_1207 -- endn_81296_57701_49265_47576_50974_99999_56935 81296_endc_99999 NOTPDB RPT E set domains--E set domains--E set domains-- 50249_52540_52540_ 50249_52540_52540_ B_53 E_12 6_2_4 65 A_390 B_2734 E_1438 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn_99999 52540_endc_53955_99999 NOTPDB RPT Nucleic acid-binding proteins--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 81901_81901_81901_ 81901_81901_81901_ B_6 E_19 7_4_3 25 B_153 E_123 --B_153 E_123 --B_153 E_123 -- 57440_endn_64501_99999 81901_endc_99999 NOTPDB RPT Cysteine rich protein B (HcpB)--Cysteine rich protein B (HcpB)--Cysteine rich protein B (HcpB)-- 51735_51735_48179_ 51735_51735_48179_ B_1 E_1 3_2_1 2 A_993 B_8798 E_3827 --A_993 B_8798 E_3827 --A_71 B_674 E_226 -- endn_48179 endc NOTPDB RPT NAD(P)-binding Rossmann-fold domains--NAD(P)-binding Rossmann-fold domains--6-phosphogluconate dehydrogenase C-terminal domain-like-- 52777_53901_53901_ 52777_53901_53901_ B_3 E_2 3_1_2 5 A_10 B_418 E_328 --A_95 B_891 E_374 --A_95 B_891 E_374 -- endn 52151_99999 NOTPDB RPT CoA-dependent acyltransferases--Thiolase-like--Thiolase-like-- 52218_63380_52343_ 52218_63380_52343_ B_35 E_7 4_3_1 42 A_110 B_706 E_157 --A_34 B_499 E_327 --A_34 B_384 E_315 -- 52218_endn_99999 endc NOTPDB CPL Flavoproteins--Riboflavin synthase domain-like--Ferredoxin reductase-like, C-terminal NADP-linked domain-- 53335_53335_53335_ 53335_53335_53335_ B_4 E_9 3_2_1 13 A_733 B_3918 E_2070 --A_733 B_3918 E_2070 --A_733 B_3918 E_2070 -- endn_99999 endc NOTPDB RPT S-adenosyl-L-methionine-dependent methyltransferases--S-adenosyl-L-methionine-dependent methyltransferases--S-adenosyl-L-methionine-dependent methyltransferases-- 54211_55666_54791_ 54211_55666_54791_ B_22 E_7 4_2_2 29 A_200 B_1096 E_669 --A_29 B_159 E_70 --A_38 B_130 E_562 -- 55666_46915 50249_99999 INPDB CPL Ribosomal protein S5 domain 2-like--Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5--Eukaryotic type KH-domain (eKH-domain)-- 53067_53067_53067_ 53067_53067_53067_ B_2 E_21 7_4_3 23 A_176 B_1667 E_1029 --A_176 B_1667 E_1029 --A_176 B_1667 E_1029 -- 53067_47113_endn_99999 53067_56778_endc INPDB RPT Actin-like ATPase domain--Actin-like ATPase domain--Actin-like ATPase domain-- 57850_52540_52540_ 57850_52540_52540_ B_5 E_1 3_2_1 6 A_19 B_52 E_3605 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- 52540_endn endc NOTPDB RPT RING finger domain, C3HC4--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 51735_50129_51735_ 51735_50129_51735_ B_2 E_1 4_2_2 3 A_993 B_8798 E_3827 --A_67 B_883 E_442 --A_993 B_8798 E_3827 -- endn_99999 endc_51735 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--GroES-like--NAD(P)-binding Rossmann-fold domains-- 46689_46689_55136_ 46689_46689_55136_ B_56 E_1 3_2_1 57 A_246 B_4125 E_4002 --A_246 B_4125 E_4002 --A_14 B_151 E_12 -- endn_99999 endc INPDB RPT Homeodomain-like--Homeodomain-like--Probable bacterial effector-binding domain-- 55979_55979_55979_ 55979_55979_55979_ B_102 E_2 3_2_1 104 A_31 B_141 E_99 --A_31 B_141 E_99 --A_31 B_141 E_99 -- endn_99999 endc INPDB RPT DNA clamp--DNA clamp--DNA clamp-- 52518_52922_53323_ 52518_52922_53323_ B_27 E_1 5_2_3 28 A_239 B_1128 E_328 --A_105 B_497 E_111 --A_72 B_87 E_1 -- endn_54862 63380_46548_99999 INPDB CPL Thiamin diphosphate-binding fold (THDP-binding)--TK C-terminal domain-like--Pyruvate-ferredoxin oxidoreductase, PFOR, domain III-- 49785_49785_49899_ 49785_49785_49899_ B_2 E_1 5_2_3 3 A_10 B_366 E_724 --A_10 B_366 E_724 --A_22 B_208 E_1314 -- endn_99999 49899_endc_99999 NOTPDB RPT Galactose-binding domain-like--Galactose-binding domain-like--Concanavalin A-like lectins/glucanases-- 52317_46689_46689_ 52317_46689_46689_ B_96 E_1 4_2_2 97 A_204 B_1244 E_262 --A_246 B_4125 E_4002 --A_246 B_4125 E_4002 -- endn_99999 endc_99999 NOTPDB RPT Class I glutamine amidotransferase-like--Homeodomain-like--Homeodomain-like-- 51161_51161_51161_ 51161_51161_51161_ B_1 E_1 3_2_1 2 A_81 B_714 E_168 --A_81 B_714 E_168 --A_81 B_714 E_168 -- endn_47336 endc NOTPDB RPT Trimeric LpxA-like enzymes--Trimeric LpxA-like enzymes--Trimeric LpxA-like enzymes-- 51569_53223_51735_ 51569_53223_51735_ B_5 E_6 6_3_3 11 A_136 B_1089 E_356 --A_61 B_487 E_172 --A_993 B_8798 E_3827 -- 52540_endn_99999 52540_endc_99999 NOTPDB CPL Aldolase--Aminoacid dehydrogenase-like, N-terminal domain--NAD(P)-binding Rossmann-fold domains-- 49503_49503_49503_ 49503_49503_49503_ B_41 E_77 8_3_5 118 A_81 B_368 E_450 --A_81 B_368 E_450 --A_81 B_368 E_450 -- endn_49503_99999 49503_endc_50974_53671_99999 INPDB RPT Cupredoxins--Cupredoxins--Cupredoxins-- 53901_53901_52151_ 53901_53901_52151_ B_94 E_19 14_8_6 113 A_95 B_891 E_374 --A_95 B_891 E_374 --B_266 E_103 -- 53901_50129_endn_53474_52777_47336_52151_99999 54637_53901_endc_47336_55048_99999 NOTPDB RPT Thiolase-like--Thiolase-like--FabD/lysophospholipase-like-- 57716_52540_52540_ 57716_52540_52540_ B_5 E_5 4_2_2 10 A_72 B_426 E_2067 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn_99999 endc_99999 NOTPDB RPT Glucocorticoid receptor-like (DNA-binding domain)--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 81665_81660_56784_ 81665_81660_56784_ B_25 E_81 5_3_2 106 A_43 B_361 E_378 --A_16 B_89 E_466 --A_230 B_1745 E_1267 -- endn_81653_99999 endc_99999 NOTPDB CPL Calcium ATPase, transmembrane domain M--Calcium ATPase, ATP-binding domain N--HAD-like-- 53448_53448_53448_ 53448_53448_53448_ B_5 E_1 5_2_3 6 A_346 B_1868 E_1125 --A_346 B_1868 E_1125 --A_346 B_1868 E_1125 -- endn_53335 53756_endc_99999 NOTPDB RPT Nucleotide-diphospho-sugar transferases--Nucleotide-diphospho-sugar transferases--Nucleotide-diphospho-sugar transferases-- 49401_49401_49401_ 49401_49401_49401_ B_12 E_1 4_2_2 13 A_2 B_220 E_29 --A_2 B_220 E_29 --A_2 B_220 E_29 -- 49401_99999 endc_49401 NOTPDB RPT Bacterial adhesins--Bacterial adhesins--Bacterial adhesins-- 63380_52343_54292_ 63380_52343_54292_ B_74 E_3 6_4_2 77 A_34 B_499 E_327 --A_34 B_384 E_315 --A_44 B_565 E_187 -- 50475_endn_50692_99999 endc_99999 INPDB CPL Riboflavin synthase domain-like--Ferredoxin reductase-like, C-terminal NADP-linked domain--2Fe-2S ferredoxin-like-- 52540_53254_52540_ 52540_53254_52540_ B_1 E_6 3_2_1 7 A_2129 B_14320 E_12913 --A_18 B_402 E_440 --A_2129 B_14320 E_12913 -- endn_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Phosphoglycerate mutase-like--P-loop containing nucleotide triphosphate hydrolases-- 46689_53155_46767_ 46689_53155_46767_ B_25 E_1 3_2_1 26 A_246 B_4125 E_4002 --A_7 B_98 E_8 --A_10 B_114 E_17 -- 57884_46689 endc NOTPDB CPL Homeodomain-like--Methylated DNA-protein cysteine methyltransferase domain--Methylated DNA-protein cysteine methyltransferase, C-terminal domain-- 55785_55785_55073_ 55785_55785_55073_ B_26 E_1 9_5_4 27 A_168 B_1284 E_394 --A_168 B_1284 E_394 --A_5 B_639 E_400 -- endn_55781_52172_55785_99999 51604_53474_endc_99999 NOTPDB RPT PYP-like sensor domain (PAS domain)--PYP-like sensor domain (PAS domain)--Adenylyl and guanylyl cyclase catalytic domain-- 55008_55008_55008_ 55008_55008_55008_ B_2 E_15 6_3_3 17 A_44 B_256 E_222 --A_44 B_256 E_222 --A_44 B_256 E_222 -- endn_55008_99999 endc_55008_99999 NOTPDB RPT Metal-binding domain--Metal-binding domain--Metal-binding domain-- 47336_52777_52777_ 47336_52777_52777_ B_61 E_6 10_5_5 67 A_4 B_486 E_88 --A_10 B_418 E_328 --A_10 B_418 E_328 -- 53335_endn_56801_51735_99999 56801_52777_47336_endc_99999 NOTPDB RPT ACP-like--CoA-dependent acyltransferases--CoA-dependent acyltransferases-- 49785_50965_81296_ 49785_50965_81296_ B_1 E_1 4_2_2 2 A_10 B_366 E_724 --A_4 B_35 E_898 --A_40 B_404 E_1207 -- endn_99999 endc_99999 INPDB CPL Galactose-binding domain-like--Galactose oxidase, central domain--E set domains-- 52540_52156_50447_ 52540_52156_50447_ B_20 E_2 5_4_1 22 A_2129 B_14320 E_12913 --A_17 B_103 E_43 --A_102 B_772 E_432 -- 81271_51735_46946_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Initiation factor IF2/eIF5b, domain 3--Translation proteins-- 81923_52540_52540_ 81923_52540_52540_ B_111 E_8 5_2_3 119 A_1 B_223 E_50 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn_99999 52540_endc_99999 INPDB RPT Double Clp-N motif--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 54534_54534_54534_ 54534_54534_54534_ B_1 E_2 5_2_3 3 A_32 B_599 E_266 --A_32 B_599 E_266 --A_32 B_599 E_266 -- endn_99999 48452_endc_47473 NOTPDB RPT FKBP-like--FKBP-like--FKBP-like-- 46565_49493_49493_ 46565_49493_49493_ B_28 E_1 4_2_2 29 A_12 B_326 E_827 --A_8 B_140 E_172 --A_8 B_140 E_172 -- endn_99999 endc_99999 NOTPDB RPT Chaperone J-domain--HSP40/DnaJ peptide-binding domain--HSP40/DnaJ peptide-binding domain-- 53092_53092_55920_ 53092_53092_55920_ B_17 E_6 4_2_2 23 A_22 B_159 E_79 --A_22 B_159 E_79 --A_50 B_337 E_200 -- endn_99999 endc_99999 NOTPDB RPT Creatinase/prolidase N-terminal domain--Creatinase/prolidase N-terminal domain--Creatinase/aminopeptidase-- 52113_52113_52113_ 52113_52113_52113_ B_1 E_21 7_4_3 22 A_1 B_117 E_366 --A_1 B_117 E_366 --A_1 B_117 E_366 -- 52113_endn_47781_99999 52113_endc_99999 NOTPDB RPT BRCT domain--BRCT domain--BRCT domain-- 51215_46689_46689_ 51215_46689_46689_ B_189 E_5 7_3_4 194 A_1 B_240 E_12 --A_246 B_4125 E_4002 --A_246 B_4125 E_4002 -- endn_49785_99999 53807_56529_endc_99999 NOTPDB RPT Regulatory protein AraC--Homeodomain-like--Homeodomain-like-- 49303_51445_49303_ 49303_51445_49303_ B_25 E_3 4_2_2 28 A_2 B_88 E_38 --A_89 B_1646 E_1474 --A_2 B_88 E_38 -- 49785_99999 endc_74650 INPDB CPL beta-Galactosidase/glucuronidase domain--(Trans)glycosidases--beta-Galactosidase/glucuronidase domain-- 52518_52518_52922_ 52518_52518_52922_ B_270 E_40 4_2_2 310 A_239 B_1128 E_328 --A_239 B_1128 E_328 --A_105 B_497 E_111 -- endn_99999 endc_99999 INPDB RPT Thiamin diphosphate-binding fold (THDP-binding)--Thiamin diphosphate-binding fold (THDP-binding)--TK C-terminal domain-like-- 50022_51905_55424_ 50022_51905_55424_ B_3 E_20 3_2_1 23 A_37 B_275 E_102 --A_358 B_2910 E_1243 --A_55 B_393 E_136 -- endn_99999 endc NOTPDB CPL ISP domain--FAD/NAD(P)-binding domain--FAD/NAD-linked reductases, dimerisation (C-terminal) domain-- 51230_51230_56954_ 51230_51230_56954_ B_22 E_1 6_2_4 23 A_35 B_1330 E_195 --A_35 B_1330 E_195 --B_451 E_40 -- endn_99999 49373_63600_endc_50998 NOTPDB RPT Single hybrid motif--Single hybrid motif--Integral outer membrane protein TolC, efflux pump component-- 55174_55120_55120_ 55174_55120_55120_ B_70 E_16 6_3_3 86 A_41 B_733 E_129 --A_48 B_598 E_185 --A_48 B_598 E_185 -- 52540_endn_99999 53927_endc_99999 NOTPDB RPT Alpha-L RNA-binding motif--Pseudouridine synthase--Pseudouridine synthase-- 51905_46689_46689_ 51905_46689_46689_ B_1 E_1 3_1_2 2 A_358 B_2910 E_1243 --A_246 B_4125 E_4002 --A_246 B_4125 E_4002 -- endn endc_99999 NOTPDB RPT FAD/NAD(P)-binding domain--Homeodomain-like--Homeodomain-like-- 52777_52777_56801_ 52777_52777_56801_ B_86 E_6 10_5_5 92 A_10 B_418 E_328 --A_10 B_418 E_328 --A_139 B_882 E_563 -- 53335_endn_52777_47336_99999 53335_endc_47336_55469_99999 NOTPDB RPT CoA-dependent acyltransferases--CoA-dependent acyltransferases--Firefly luciferase-like-- 51735_52283_51735_ 51735_52283_51735_ B_3 E_1 3_2_1 4 A_993 B_8798 E_3827 --A_53 B_465 E_206 --A_993 B_8798 E_3827 -- 51735_99999 endc NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Formate/glycerate dehydrogenase catalytic domain-like--NAD(P)-binding Rossmann-fold domains-- 52540_50249_50249_ 52540_50249_50249_ B_1 E_3 4_2_2 4 A_2129 B_14320 E_12913 --A_390 B_2734 E_1438 --A_390 B_2734 E_1438 -- endn_99999 50249_99999 NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--Nucleic acid-binding proteins--Nucleic acid-binding proteins-- 48695_52540_52540_ 48695_52540_52540_ B_9 E_2 3_1_2 11 A_18 B_378 E_163 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn 52540_endc NOTPDB RPT Multiheme cytochromes--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 55973_55973_55973_ 55973_55973_55973_ B_93 E_55 3_2_1 148 A_2 B_100 E_69 --A_2 B_100 E_69 --A_2 B_100 E_69 -- endn_99999 endc INPDB RPT S-adenosylmethionine synthetase--S-adenosylmethionine synthetase--S-adenosylmethionine synthetase-- 55816_56300_55816_ 55816_56300_55816_ B_5 E_2 4_2_2 7 A_5 B_129 E_30 --A_170 B_837 E_750 --A_5 B_129 E_30 -- 56300_99999 endc_99999 NOTPDB CPL 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain--Metallo-dependent phosphatases--5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain-- 46689_46689_46689_ 46689_46689_46689_ B_1 E_73 6_3_3 74 A_246 B_4125 E_4002 --A_246 B_4125 E_4002 --A_246 B_4125 E_4002 -- endn_46689_99999 endc_46689_99999 INPDB RPT Homeodomain-like--Homeodomain-like--Homeodomain-like-- 51905_54373_51971_ 51905_54373_51971_ B_1 E_2 4_2_2 3 A_358 B_2910 E_1243 --A_16 B_381 E_311 --A_47 B_404 E_155 -- endn_99999 54373_endc NOTPDB CPL FAD/NAD(P)-binding domain--FAD-linked reductases, C-terminal domain--Nucleotide-binding domain-- 81827_54534_54534_ 81827_54534_54534_ B_25 E_2 5_2_3 27 A_4 B_245 E_11 --A_32 B_599 E_266 --A_32 B_599 E_266 -- endn_99999 53335_endc_99999 INPDB RPT Porin chaperone SurA, peptide-binding domain--FKBP-like--FKBP-like-- 52540_52540_48371_ 52540_52540_48371_ B_2 E_4 5_3_2 6 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --A_73 B_255 E_3951 -- 52540_endn_99999 48371_endc NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--ARM repeat-- 51735_48179_51735_ 51735_48179_51735_ B_3 E_3 5_2_3 6 A_993 B_8798 E_3827 --A_71 B_674 E_226 --A_993 B_8798 E_3827 -- endn_99999 51735_endc_48179 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--6-phosphogluconate dehydrogenase C-terminal domain-like--NAD(P)-binding Rossmann-fold domains-- 52374_47323_46589_ 52374_47323_46589_ B_29 E_3 3_2_1 32 A_247 B_1540 E_642 --A_100 B_688 E_246 --A_16 B_318 E_97 -- 50677_endn endc INPDB CPL Nucleotidylyl transferase--Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases--tRNA-binding arm-- 51717_47644_52242_ 51717_47644_52242_ B_45 E_13 5_2_3 58 A_77 B_207 E_36 --A_19 B_54 E_14 --A_62 B_169 E_35 -- 82282_endn endc_99999_56507 NOTPDB CPL Dihydropteroate synthetase-like--Methionine synthase domain--Cobalamin (vitamin B12)-binding domain-- 52540_52540_48452_ 52540_52540_48452_ B_6 E_1 5_3_2 7 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --A_146 B_1937 E_3442 -- endn_55073_99999 endc_99999 NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--TPR-like-- 54791_52540_52540_ 54791_52540_52540_ B_1 E_3 3_2_1 4 A_38 B_130 E_562 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn_99999 endc NOTPDB RPT Eukaryotic type KH-domain (eKH-domain)--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 48334_52540_52540_ 48334_52540_52540_ B_1 E_5 4_3_1 6 A_8 B_135 E_96 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn_53150_99999 endc NOTPDB RPT DNA repair protein MutS, domain III--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 81624_46946_57716_ 81624_46946_57716_ B_93 E_3 4_2_2 96 B_105 E_21 --A_48 B_219 E_75 --A_72 B_426 E_2067 -- endn_99999 endc_99999 INPDB CPL N-terminal domain of MutM-like DNA repair proteins--S13-like H2TH domain--Glucocorticoid receptor-like (DNA-binding domain)-- 52317_47648_52418_ 52317_47648_52418_ B_7 E_1 3_2_1 8 A_204 B_1244 E_262 --A_24 B_152 E_15 --A_27 B_155 E_18 -- endn_99999 endc NOTPDB CPL Class I glutamine amidotransferase-like--Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain--Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain-- 52096_51735_48179_ 52096_51735_48179_ B_55 E_23 5_2_3 78 A_96 B_1208 E_331 --A_993 B_8798 E_3827 --A_71 B_674 E_226 -- endn_99999 endc_48179_99999 NOTPDB CPL ClpP/crotonase--NAD(P)-binding Rossmann-fold domains--6-phosphogluconate dehydrogenase C-terminal domain-like-- 52540_54980_54980_ 52540_54980_54980_ B_30 E_1 4_2_2 31 A_2129 B_14320 E_12913 --A_28 B_403 E_157 --A_28 B_403 E_157 -- endn_51182 52540_99999 NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--EF-G/eEF-2 domains III and V--EF-G/eEF-2 domains III and V-- 54211_55666_50249_ 54211_55666_50249_ B_45 E_5 4_2_2 50 A_200 B_1096 E_669 --A_29 B_159 E_70 --A_390 B_2734 E_1438 -- endn_46915 endc_99999 NOTPDB CPL Ribosomal protein S5 domain 2-like--Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5--Nucleic acid-binding proteins-- 51735_48179_51905_ 51735_48179_51905_ B_3 E_1 3_1_2 4 A_993 B_8798 E_3827 --A_71 B_674 E_226 --A_358 B_2910 E_1243 -- endn endc_48179 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--6-phosphogluconate dehydrogenase C-terminal domain-like--FAD/NAD(P)-binding domain-- 51735_51735_47336_ 51735_51735_47336_ B_28 E_4 7_4_3 32 A_993 B_8798 E_3827 --A_993 B_8798 E_3827 --A_4 B_486 E_88 -- endn_50129_51735_99999 53474_endc_99999 NOTPDB RPT NAD(P)-binding Rossmann-fold domains--NAD(P)-binding Rossmann-fold domains--ACP-like-- 53901_53901_53901_ 53901_53901_53901_ B_5 E_5 8_4_4 10 A_95 B_891 E_374 --A_95 B_891 E_374 --A_95 B_891 E_374 -- 53901_endn_52151_99999 53901_endc_52151_99999 NOTPDB RPT Thiolase-like--Thiolase-like--Thiolase-like-- 52540_52540_52402_ 52540_52540_52402_ B_1 E_1 4_2_2 2 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --A_350 B_1402 E_436 -- 52540_endn endc_99999 NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--Adenine nucleotide alpha hydrolases-like-- 46689_46689_53155_ 46689_46689_53155_ B_25 E_1 6_4_2 26 A_246 B_4125 E_4002 --A_246 B_4125 E_4002 --A_7 B_98 E_8 -- endn_57884_52768_99999 46894_46767 NOTPDB RPT Homeodomain-like--Homeodomain-like--Methylated DNA-protein cysteine methyltransferase domain-- 82185_82185_82185_ 82185_82185_82185_ B_2 E_4 3_1_2 6 B_91 E_127 --B_91 E_127 --B_91 E_127 -- endn endc_99999 NOTPDB RPT Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain--Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain--Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain-- 68912_50249_52540_ 68912_50249_52540_ B_45 E_1 5_3_2 46 B_106 E_13 --A_390 B_2734 E_1438 --A_2129 B_14320 E_12913 -- endn_52833_99999 54160_endc NOTPDB CPL Rho termination factor, N-terminal domain--Nucleic acid-binding proteins--P-loop containing nucleotide triphosphate hydrolases-- 49785_49785_51445_ 49785_49785_51445_ B_3 E_4 6_3_3 7 A_10 B_366 E_724 --A_10 B_366 E_724 --A_89 B_1646 E_1474 -- endn_49785_99999 49344_endc_99999 NOTPDB RPT Galactose-binding domain-like--Galactose-binding domain-like--(Trans)glycosidases-- 52374_47323_47323_ 52374_47323_47323_ B_1 E_1 3_2_1 2 A_247 B_1540 E_642 --A_100 B_688 E_246 --A_100 B_688 E_246 -- 50677_endn endc NOTPDB RPT Nucleotidylyl transferase--Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases--Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases-- 49899_49899_49899_ 49899_49899_49899_ B_2 E_16 7_4_3 18 A_22 B_208 E_1314 --A_22 B_208 E_1314 --A_22 B_208 E_1314 -- 57196_endn_49899_99999 49899_endc_99999 INPDB RPT Concanavalin A-like lectins/glucanases--Concanavalin A-like lectins/glucanases--Concanavalin A-like lectins/glucanases-- 82693_82693_82866_ 82693_82693_82866_ B_20 E_1 3_2_1 21 A_3 B_362 E_31 --A_3 B_362 E_31 --A_45 B_639 E_196 -- 99999_82693 endc INPDB RPT Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains--Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains--Multidrug efflux transporter AcrB transmembrane domain-- 53795_52540_52540_ 53795_52540_52540_ B_7 E_3 4_2_2 10 A_421 B_3843 E_485 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn_99999 52540_endc NOTPDB RPT PEP carboxykinase-like--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 55781_55781_55781_ 55781_55781_55781_ B_8 E_1 7_3_4 9 A_54 B_1030 E_131 --A_54 B_1030 E_131 --A_54 B_1030 E_131 -- endn_55781_99999 48547_55781_endc_55785 NOTPDB RPT GAF domain-like--GAF domain-like--GAF domain-like-- 49785_49785_49785_ 49785_49785_49785_ B_3 E_3 8_4_4 6 A_10 B_366 E_724 --A_10 B_366 E_724 --A_10 B_366 E_724 -- endn_49785_53590_99999 49785_endc_51445_99999 NOTPDB RPT Galactose-binding domain-like--Galactose-binding domain-like--Galactose-binding domain-like-- 55545_51445_81296_ 55545_51445_81296_ B_6 E_2 4_2_2 8 B_66 E_37 --A_89 B_1646 E_1474 --A_40 B_404 E_1207 -- endn_49384 56988_endc INPDB CPL beta-N-acetylhexosaminidase-like domain--(Trans)glycosidases--E set domains-- 55874_50341_52172_ 55874_50341_52172_ B_24 E_1 5_3_2 25 A_178 B_2970 E_398 --A_19 B_255 E_17 --A_85 B_3166 E_241 -- endn_47384_99999 52172_endc NOTPDB CPL ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase--CheW-like--CheY-like-- 50044_50044_50044_ 50044_50044_50044_ B_7 E_54 9_4_5 61 A_2 B_84 E_1671 --A_2 B_84 E_1671 --A_2 B_84 E_1671 -- endn_49464_50044_99999 50044_48065_endc_55550_99999 NOTPDB RPT SH3-domain--SH3-domain--SH3-domain-- 53474_53474_53474_ 53474_53474_53474_ B_1 E_1 4_2_2 2 A_141 B_2949 E_2909 --A_141 B_2949 E_2909 --A_141 B_2949 E_2909 -- endn_53474 53474_endc NOTPDB RPT alpha/beta-Hydrolases--alpha/beta-Hydrolases--alpha/beta-Hydrolases-- 47203_56645_47203_ 47203_56645_47203_ B_6 E_1 4_2_2 7 A_62 B_573 E_243 --A_70 B_599 E_245 --A_62 B_573 E_243 -- 56645_endn 47203_endc NOTPDB CPL Acyl-CoA dehydrogenase C-terminal domain-like--Acyl-CoA dehydrogenase NM domain-like--Acyl-CoA dehydrogenase C-terminal domain-like-- 55785_55781_55073_ 55785_55781_55073_ B_6 E_1 6_4_2 7 A_168 B_1284 E_394 --A_54 B_1030 E_131 --A_5 B_639 E_400 -- endn_54631_55785_99999 endc_99999 NOTPDB CPL PYP-like sensor domain (PAS domain)--GAF domain-like--Adenylyl and guanylyl cyclase catalytic domain-- 55298_55298_55298_ 55298_55298_55298_ B_4 E_1 3_2_1 5 A_9 B_295 E_48 --A_9 B_295 E_48 --A_9 B_295 E_48 -- endn_99999 endc NOTPDB RPT YjgF-like--YjgF-like--YjgF-like-- 54292_63380_52343_ 54292_63380_52343_ B_55 E_1 6_2_4 56 A_44 B_565 E_187 --A_34 B_499 E_327 --A_34 B_384 E_315 -- endn_99999 55920_51905_endc_99999 INPDB CPL 2Fe-2S ferredoxin-like--Riboflavin synthase domain-like--Ferredoxin reductase-like, C-terminal NADP-linked domain-- 57884_46689_46689_ 57884_46689_46689_ B_40 E_1 6_1_5 41 B_51 E_4 --A_246 B_4125 E_4002 --A_246 B_4125 E_4002 -- endn 46894_55945_endc_99999_53155 NOTPDB RPT Ada DNA repair protein, N-terminal domain (N-Ada 10)--Homeodomain-like--Homeodomain-like-- 57467_57467_57467_ 57467_57467_57467_ B_1 E_27 8_5_3 28 A_2 B_8 E_358 --A_2 B_8 E_358 --A_2 B_8 E_358 -- 50242_endn_57467_57283_99999 57467_endc_99999 NOTPDB RPT Ovomucoid/PCI-1 like inhibitors--Ovomucoid/PCI-1 like inhibitors--Ovomucoid/PCI-1 like inhibitors-- 54106_54106_54106_ 54106_54106_54106_ B_31 E_5 10_4_6 36 B_368 E_99 --B_368 E_99 --B_368 E_99 -- endn_54106_53955_99999 47090_54106_53822_53474_endc_99999 NOTPDB RPT LysM domain--LysM domain--LysM domain-- 63418_53623_53244_ 63418_53623_53244_ B_153 E_1 7_4_3 154 B_167 E_6 --A_21 B_536 E_49 --A_16 B_527 E_43 -- endn_56784_69125_99999 endc_53623_99999 INPDB CPL MurE/MurF N-terminal domain--MurD-like peptide ligases, catalytic domain--MurD-like peptide ligases, peptide-binding domain-- 51735_47336_53474_ 51735_47336_53474_ B_5 E_3 3_2_1 8 A_993 B_8798 E_3827 --A_4 B_486 E_88 --A_141 B_2949 E_2909 -- 51735_99999 endc NOTPDB CPL NAD(P)-binding Rossmann-fold domains--ACP-like--alpha/beta-Hydrolases-- 54292_47741_56176_ 54292_47741_56176_ B_10 E_53 6_2_4 63 A_44 B_565 E_187 --A_8 B_97 E_63 --A_43 B_454 E_248 -- endn_56003 55447_54665_endc_99999 INPDB CPL 2Fe-2S ferredoxin-like--CO dehydrogenase ISP C-domain like--FAD-binding domain-- 56091_50249_47781_ 56091_50249_47781_ B_101 E_1 6_2_4 102 A_34 B_180 E_92 --A_390 B_2734 E_1438 --A_49 B_595 E_68 -- endn_99999 52113_endc_47781_99999 INPDB CPL DNA ligase/mRNA capping enzyme, catalytic domain--Nucleic acid-binding proteins--RuvA domain 2-like-- 52777_52777_52777_ 52777_52777_52777_ B_11 E_4 8_4_4 15 A_10 B_418 E_328 --A_10 B_418 E_328 --A_10 B_418 E_328 -- endn_52777_47336_99999 56801_52777_endc_99999 NOTPDB RPT CoA-dependent acyltransferases--CoA-dependent acyltransferases--CoA-dependent acyltransferases-- A 22 51905_54862_51735_ 51905_54862_51735_ A_3 3_2_1 3 A_358 B_2910 E_1243 --A_411 B_743 E_103 --A_993 B_8798 E_3827 -- 54862_99999 endc NOTPDB CPL FAD/NAD(P)-binding domain--4Fe-4S ferredoxins--NAD(P)-binding Rossmann-fold domains-- 51126_51126_49299_ 51126_51126_49299_ A_2 4_2_2 2 A_116 B_481 E_444 --A_116 B_481 E_444 --A_103 B_31 E_55 -- endn_99999 49299_99999 NOTPDB RPT Pectin lyase-like--Pectin lyase-like--PKD domain-- 47473_51126_49299_ 47473_51126_49299_ A_7 4_1_3 7 A_51 B_190 E_2808 --A_116 B_481 E_444 --A_103 B_31 E_55 -- endn 49299_50998_99999 NOTPDB CPL EF-hand--Pectin lyase-like--PKD domain-- 52540_54814_52540_ 52540_54814_52540_ A_3 3_2_1 3 A_2129 B_14320 E_12913 --A_82 B_390 E_98 --A_2129 B_14320 E_12913 -- 52540_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Prokaryotic type KH domain (pKH-domain)--P-loop containing nucleotide triphosphate hydrolases-- 49299_50998_49299_ 49299_50998_49299_ A_14 8_4_4 14 A_103 B_31 E_55 --A_73 B_392 E_284 --A_103 B_31 E_55 -- 51126_endn_49299_99999 49299_49373_50998_99999 NOTPDB CPL PKD domain--Quinoprotein alcohol dehydrogenase-like--PKD domain-- 52540_52540_47781_ 52540_52540_47781_ A_2 3_2_1 2 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --A_49 B_595 E_68 -- endn_99999 endc NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--RuvA domain 2-like-- 50249_50249_64182_ 50249_50249_64182_ A_10 5_4_1 10 A_390 B_2734 E_1438 --A_390 B_2734 E_1438 --A_75 B_234 E_33 -- endn_57903_57938_57802 endc NOTPDB RPT Nucleic acid-binding proteins--Nucleic acid-binding proteins--DHH phosphoesterases-- 52540_52540_54814_ 52540_52540_54814_ A_4 4_2_2 4 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --A_82 B_390 E_98 -- endn_99999 52540_99999 NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--Prokaryotic type KH domain (pKH-domain)-- 49299_50974_49299_ 49299_50974_49299_ A_4 6_3_3 4 A_103 B_31 E_55 --A_28 B_71 E_18 --A_103 B_31 E_55 -- 51126_49299_50974 46626_49299_endc NOTPDB CPL PKD domain--Nitrous oxide reductase, N-terminal domain--PKD domain-- 54862_55124_56014_ 54862_55124_56014_ A_2 3_1_2 2 A_411 B_743 E_103 --A_24 B_104 E_14 --A_25 B_194 E_20 -- endn endc_99999 NOTPDB CPL 4Fe-4S ferredoxins--Sulfite reductase, domains 1 and 3--Sulfite reductase hemoprotein (SiRHP), domains 2 and 4-- 51126_49299_50974_ 51126_49299_50974_ A_2 3_1_2 2 A_116 B_481 E_444 --A_103 B_31 E_55 --A_28 B_71 E_18 -- endn 49299_endc NOTPDB CPL Pectin lyase-like--PKD domain--Nitrous oxide reductase, N-terminal domain-- 55785_55781_55874_ 55785_55781_55874_ A_4 3_2_1 4 A_168 B_1284 E_394 --A_54 B_1030 E_131 --A_178 B_2970 E_398 -- 99999_55785 endc NOTPDB CPL PYP-like sensor domain (PAS domain)--GAF domain-like--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 50998_49299_49299_ 50998_49299_49299_ A_7 5_2_3 7 A_73 B_392 E_284 --A_103 B_31 E_55 --A_103 B_31 E_55 -- 49299_99999 49299_50998_99999 NOTPDB RPT Quinoprotein alcohol dehydrogenase-like--PKD domain--PKD domain-- 49299_49299_50998_ 49299_49299_50998_ A_12 7_5_2 12 A_103 B_31 E_55 --A_103 B_31 E_55 --A_73 B_392 E_284 -- 51126_49299_47473_50998_99999 49299_99999 NOTPDB RPT PKD domain--PKD domain--Quinoprotein alcohol dehydrogenase-like-- 46548_54862_54862_ 46548_54862_54862_ A_4 5_2_3 4 A_125 B_477 E_67 --A_411 B_743 E_103 --A_411 B_743 E_103 -- endn_54862 endc_99999_54862 NOTPDB RPT alpha-helical ferredoxin--4Fe-4S ferredoxins--4Fe-4S ferredoxins-- 50965_49265_49265_ 50965_49265_49265_ A_2 3_1_2 2 A_4 B_35 E_898 --A_23 B_135 E_1734 --A_23 B_135 E_1734 -- endn 49265_99999 NOTPDB RPT Galactose oxidase, central domain--Fibronectin type III--Fibronectin type III-- 46785_46785_55681_ 46785_46785_55681_ A_4 3_2_1 4 A_1241 B_7979 E_2143 --A_1241 B_7979 E_2143 --A_205 B_1250 E_450 -- endn_46785 endc NOTPDB RPT "Winged helix" DNA-binding domain--"Winged helix" DNA-binding domain--Class II aaRS and biotin synthetases-- 69318_49299_49299_ 69318_49299_49299_ A_2 4_2_2 2 A_6 B_79 E_181 --A_103 B_31 E_55 --A_103 B_31 E_55 -- 49299_47473 49299_99999 NOTPDB RPT Integrin alpha N-terminal domain--PKD domain--PKD domain-- 51126_49299_49299_ 51126_49299_49299_ A_14 6_3_3 14 A_116 B_481 E_444 --A_103 B_31 E_55 --A_103 B_31 E_55 -- 51126_endn_47473 49299_50998_99999 NOTPDB RPT Pectin lyase-like--PKD domain--PKD domain-- 47473_49299_49299_ 47473_49299_49299_ A_2 3_1_2 2 A_51 B_190 E_2808 --A_103 B_31 E_55 --A_103 B_31 E_55 -- endn 49299_50998 NOTPDB RPT EF-hand--PKD domain--PKD domain-- 55608_51998_51294_ 55608_51998_51294_ A_3 4_2_2 3 A_42 B_71 E_32 --A_39 B_258 E_33 --A_61 B_50 E_53 -- 55608_99999 99999_55608 NOTPDB CPL Homing endonucleases--PFL-like glycyl radical enzymes--Hedgehog/intein (Hint) domain-- 55608_52540_48019_ 55608_52540_48019_ A_2 3_2_1 2 A_42 B_71 E_32 --A_2129 B_14320 E_12913 --A_24 B_335 E_97 -- 99999_55608 endc NOTPDB CPL Homing endonucleases--P-loop containing nucleotide triphosphate hydrolases--DNA polymerase III clamp loader subunits, C-terminal domain-- B 142 54106_54106_53822_ 54106_54106_53822_ B_2 3_2_1 2 B_368 E_99 --B_368 E_99 --A_49 B_1285 E_794 -- endn_54106 endc NOTPDB RPT LysM domain--LysM domain--Periplasmic binding protein-like I-- 56601_54184_54184_ 56601_54184_54184_ B_25 4_2_2 25 A_15 B_1220 E_127 --A_7 B_84 E_2 --A_7 B_84 E_2 -- 56519_99999 endc_99999 INPDB RPT beta-Lactamase/D-ala carboxypeptidase--Penicillin-binding protein 2x (pbp-2x), c-terminal domain--Penicillin-binding protein 2x (pbp-2x), c-terminal domain-- 55781_55781_55874_ 55781_55781_55874_ B_9 3_2_1 9 A_54 B_1030 E_131 --A_54 B_1030 E_131 --A_178 B_2970 E_398 -- endn_99999 endc NOTPDB RPT GAF domain-like--GAF domain-like--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 55785_55874_52172_ 55785_55874_52172_ B_2 3_2_1 2 A_168 B_1284 E_394 --A_178 B_2970 E_398 --A_85 B_3166 E_241 -- endn_55781 endc NOTPDB CPL PYP-like sensor domain (PAS domain)--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase--CheY-like-- 55785_55785_52540_ 55785_55785_52540_ B_10 7_4_3 10 A_168 B_1284 E_394 --A_168 B_1284 E_394 --A_2129 B_14320 E_12913 -- endn_55594_51735_99999 48283_endc_46689 NOTPDB RPT PYP-like sensor domain (PAS domain)--PYP-like sensor domain (PAS domain)--P-loop containing nucleotide triphosphate hydrolases-- 63520_52794_55804_ 63520_52794_55804_ B_23 3_2_1 23 B_147 E_5 --B_191 E_4 --A_2 B_304 E_123 -- 63520_99999 endc NOTPDB CPL PTS-regulatory domain, PRD--Enzyme IIB-cellobiose--Phoshotransferase/anion transport protein-- 51230_51230_49373_ 51230_51230_49373_ B_4 3_1_2 4 A_35 B_1330 E_195 --A_35 B_1330 E_195 --A_20 B_171 E_29 -- endn endc_99999 NOTPDB RPT Single hybrid motif--Single hybrid motif--Invasin/intimin cell-adhesion fragments-- 46689_46689_53098_ 46689_46689_53098_ B_22 5_2_3 22 A_246 B_4125 E_4002 --A_246 B_4125 E_4002 --A_290 B_2494 E_2335 -- endn_46785 50610_endc_99999 NOTPDB RPT Homeodomain-like--Homeodomain-like--Ribonuclease H-like-- 56645_47203_52467_ 56645_47203_52467_ B_3 3_1_2 3 A_70 B_599 E_245 --A_62 B_573 E_243 --A_132 B_640 E_265 -- endn endc_57802 NOTPDB CPL Acyl-CoA dehydrogenase NM domain-like--Acyl-CoA dehydrogenase C-terminal domain-like--DHS-like NAD/FAD-binding domain-- 57884_46689_53155_ 57884_46689_53155_ B_3 3_1_2 3 B_51 E_4 --A_246 B_4125 E_4002 --A_7 B_98 E_8 -- endn 46894_46767 NOTPDB CPL Ada DNA repair protein, N-terminal domain (N-Ada 10)--Homeodomain-like--Methylated DNA-protein cysteine methyltransferase domain-- 48452_47384_55874_ 48452_47384_55874_ B_3 3_2_1 3 A_146 B_1937 E_3442 --A_45 B_1750 E_74 --A_178 B_2970 E_398 -- endn_99999 endc NOTPDB CPL TPR-like--Homodimeric domain of signal transducing histidine kinase--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 52540_52540_52440_ 52540_52540_52440_ B_6 3_1_2 6 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --A_71 B_698 E_210 -- endn endc_99999 NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--PreATP-grasp domain-- 55781_55781_52540_ 55781_55781_52540_ B_6 5_2_3 6 A_54 B_1030 E_131 --A_54 B_1030 E_131 --A_2129 B_14320 E_12913 -- endn_99999 endc_48283_46689 NOTPDB RPT GAF domain-like--GAF domain-like--P-loop containing nucleotide triphosphate hydrolases-- 48452_48452_52540_ 48452_48452_52540_ B_4 3_2_1 4 A_146 B_1937 E_3442 --A_146 B_1937 E_3442 --A_2129 B_14320 E_12913 -- endn_99999 endc NOTPDB RPT TPR-like--TPR-like--P-loop containing nucleotide triphosphate hydrolases-- 52821_52821_52821_ 52821_52821_52821_ B_11 5_3_2 11 A_39 B_452 E_298 --A_39 B_452 E_298 --A_39 B_452 E_298 -- endn_52821_99999 endc_52821 NOTPDB RPT Rhodanese/Cell cycle control phosphatase--Rhodanese/Cell cycle control phosphatase--Rhodanese/Cell cycle control phosphatase-- 69360_69360_69360_ 69360_69360_69360_ B_5 6_2_4 5 B_34 E_3 --B_34 E_3 --B_34 E_3 -- endn_99999 endc_51445_99999_69360 NOTPDB RPT Choline binding domain of autolysin C-LytA--Choline binding domain of autolysin C-LytA--Choline binding domain of autolysin C-LytA-- 49265_51445_54556_ 49265_51445_54556_ B_5 5_3_2 5 A_23 B_135 E_1734 --A_89 B_1646 E_1474 --A_2 B_23 E_41 -- endn_49384_49265 endc_99999 NOTPDB CPL Fibronectin type III--(Trans)glycosidases--Chitinase insertion domain-- 56281_52218_50475_ 56281_52218_50475_ B_16 3_2_1 16 A_273 B_950 E_318 --A_110 B_706 E_157 --A_59 B_417 E_63 -- endn_99999 endc NOTPDB CPL Metallo-hydrolase/oxidoreductase--Flavoproteins--FMN-binding split barrel-- 50249_50249_46785_ 50249_50249_46785_ B_2 3_2_1 2 A_390 B_2734 E_1438 --A_390 B_2734 E_1438 --A_1241 B_7979 E_2143 -- 50249_endn endc NOTPDB RPT Nucleic acid-binding proteins--Nucleic acid-binding proteins--"Winged helix" DNA-binding domain-- 53850_53850_55785_ 53850_53850_55785_ B_7 3_1_2 7 A_257 B_5627 E_740 --A_257 B_5627 E_740 --A_168 B_1284 E_394 -- endn 47384_99999 NOTPDB RPT Periplasmic binding protein-like II--Periplasmic binding protein-like II--PYP-like sensor domain (PAS domain)-- 51126_51126_52540_ 51126_51126_52540_ B_3 3_2_1 3 A_116 B_481 E_444 --A_116 B_481 E_444 --A_2129 B_14320 E_12913 -- endn_99999 endc NOTPDB RPT Pectin lyase-like--Pectin lyase-like--P-loop containing nucleotide triphosphate hydrolases-- 54292_53706_50692_ 54292_53706_50692_ B_5 5_3_2 5 A_44 B_565 E_187 --A_63 B_328 E_38 --A_113 B_397 E_88 -- endn_99999_54862 endc_54862 NOTPDB CPL 2Fe-2S ferredoxin-like--Formate dehydrogenase/DMSO reductase, domains 1-3--ADC-like-- 46785_52540_63520_ 46785_52540_63520_ B_17 3_1_2 17 A_1241 B_7979 E_2143 --A_2129 B_14320 E_12913 --B_147 E_5 -- endn 53062_63520 NOTPDB CPL "Winged helix" DNA-binding domain--P-loop containing nucleotide triphosphate hydrolases--PTS-regulatory domain, PRD-- 47226_52172_52172_ 47226_52172_52172_ B_2 4_2_2 2 A_9 B_246 E_33 --A_85 B_3166 E_241 --A_85 B_3166 E_241 -- endn_99999 endc_99999 NOTPDB RPT Histidine-containing phosphotransfer domain, HPT domain--CheY-like--CheY-like-- 51905_51971_51971_ 51905_51971_51971_ B_2 4_2_2 2 A_358 B_2910 E_1243 --A_47 B_404 E_155 --A_47 B_404 E_155 -- endn_54292 endc_54862 NOTPDB RPT FAD/NAD(P)-binding domain--Nucleotide-binding domain--Nucleotide-binding domain-- 48695_46626_48695_ 48695_46626_48695_ B_2 4_2_2 2 A_18 B_378 E_163 --A_40 B_894 E_220 --A_18 B_378 E_163 -- 46626_endn 46626_endc NOTPDB CPL Multiheme cytochromes--Cytochrome c--Multiheme cytochromes-- 52172_55785_55073_ 52172_55785_55073_ B_5 5_2_3 5 A_85 B_3166 E_241 --A_168 B_1284 E_394 --A_5 B_639 E_400 -- endn_99999 51569_endc_99999 NOTPDB CPL CheY-like--PYP-like sensor domain (PAS domain)--Adenylyl and guanylyl cyclase catalytic domain-- 74778_52016_53732_ 74778_52016_53732_ B_31 4_2_2 31 B_34 E_1 --A_33 B_193 E_111 --A_34 B_191 E_68 -- endn_99999 endc_99999 INPDB CPL Aconitase B, N-terminal domain--Aconitase--Aconitase iron-sulfur domain-- 52172_52172_55785_ 52172_52172_55785_ B_2 3_1_2 2 A_85 B_3166 E_241 --A_85 B_3166 E_241 --A_168 B_1284 E_394 -- endn 55781_99999 NOTPDB RPT CheY-like--CheY-like--PYP-like sensor domain (PAS domain)-- 81271_55186_52540_ 81271_55186_52540_ B_5 3_1_2 5 A_25 B_298 E_67 --A_42 B_237 E_81 --A_2129 B_14320 E_12913 -- endn 52540_endc NOTPDB CPL TGS-like--Threonyl-tRNA synthetase (ThrRS), second 'additional' domain--P-loop containing nucleotide triphosphate hydrolases-- 48329_48329_48452_ 48329_48329_48452_ B_5 3_1_2 5 A_9 B_1007 E_45 --A_9 B_1007 E_45 --A_146 B_1937 E_3442 -- endn endc_99999 NOTPDB RPT RNA polymerase sigma subunit--RNA polymerase sigma subunit--TPR-like-- 52172_46689_46689_ 52172_46689_46689_ B_12 3_2_1 12 A_85 B_3166 E_241 --A_246 B_4125 E_4002 --A_246 B_4125 E_4002 -- endn_55874 endc NOTPDB RPT CheY-like--Homeodomain-like--Homeodomain-like-- 57938_52540_52540_ 57938_52540_52540_ B_5 4_2_2 5 A_19 B_61 E_147 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn_99999 endc_99999 NOTPDB RPT Cysteine-rich domain of the chaperone protein DnaJ.--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 49785_49785_49303_ 49785_49785_49303_ B_2 4_2_2 2 A_10 B_366 E_724 --A_10 B_366 E_724 --A_2 B_88 E_38 -- endn_99999 51445_99999 NOTPDB RPT Galactose-binding domain-like--Galactose-binding domain-like--beta-Galactosidase/glucuronidase domain-- 56519_56601_54184_ 56519_56601_54184_ B_35 4_2_2 35 B_229 E_7 --A_15 B_1220 E_127 --A_7 B_84 E_2 -- endn_99999 54184_endc INPDB CPL Penicillin binding protein dimerisation domain--beta-Lactamase/D-ala carboxypeptidase--Penicillin-binding protein 2x (pbp-2x), c-terminal domain-- 47781_47781_52113_ 47781_47781_52113_ B_7 3_2_1 7 A_49 B_595 E_68 --A_49 B_595 E_68 --A_1 B_117 E_366 -- 50249_99999 endc NOTPDB RPT RuvA domain 2-like--RuvA domain 2-like--BRCT domain-- 48230_74650_49863_ 48230_74650_49863_ B_10 6_4_2 10 A_2 B_34 E_3 --A_8 B_214 E_72 --B_11 E_4 -- endn_81296_49899_99999 endc_99999 INPDB CPL Chondroitin AC/alginate lyase--Galactose mutarotase-like--Hyaluronate lyase-like, C-terminal domain-- 51182_46689_46689_ 51182_46689_46689_ B_29 6_2_4 29 A_107 B_1063 E_385 --A_246 B_4125 E_4002 --A_246 B_4125 E_4002 -- endn_51182 51182_endc_46785_99999 NOTPDB RPT RmlC-like cupins--Homeodomain-like--Homeodomain-like-- 47384_55874_52540_ 47384_55874_52540_ B_2 3_2_1 2 A_45 B_1750 E_74 --A_178 B_2970 E_398 --A_2129 B_14320 E_12913 -- 55781_99999 endc NOTPDB CPL Homodimeric domain of signal transducing histidine kinase--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase--P-loop containing nucleotide triphosphate hydrolases-- 47090_47090_47090_ 47090_47090_47090_ B_9 6_3_3 9 A_5 B_242 E_88 --A_5 B_242 E_88 --A_5 B_242 E_88 -- endn_47090_99999 47090_endc_99999 NOTPDB RPT PGBD-like--PGBD-like--PGBD-like-- 53448_51161_53738_ 53448_51161_53738_ B_6 4_1_3 6 A_346 B_1868 E_1125 --A_81 B_714 E_168 --A_38 B_288 E_93 -- endn 53738_53448_99999 NOTPDB CPL Nucleotide-diphospho-sugar transferases--Trimeric LpxA-like enzymes--Phosphoglucomutase, first 3 domains-- 55781_81606_55874_ 55781_81606_55874_ B_4 3_2_1 4 A_54 B_1030 E_131 --A_2 B_180 E_410 --A_178 B_2970 E_398 -- 99999_55785 endc NOTPDB CPL GAF domain-like--Protein serine/threonine phosphatase 2C, catalytic domain--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 52540_53795_53795_ 52540_53795_53795_ B_3 3_2_1 3 A_2129 B_14320 E_12913 --A_421 B_3843 E_485 --A_421 B_3843 E_485 -- 52540_99999 endc NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--PEP carboxykinase-like--PEP carboxykinase-like-- 49373_49373_49373_ 49373_49373_49373_ B_12 5_2_3 12 A_20 B_171 E_29 --A_20 B_171 E_29 --A_20 B_171 E_29 -- 49373_99999 49373_52058_99999 INPDB RPT Invasin/intimin cell-adhesion fragments--Invasin/intimin cell-adhesion fragments--Invasin/intimin cell-adhesion fragments-- 63520_63520_52794_ 63520_63520_52794_ B_23 4_2_2 23 B_147 E_5 --B_147 E_5 --B_191 E_4 -- 46785_99999 55804_endc NOTPDB RPT PTS-regulatory domain, PRD--PTS-regulatory domain, PRD--Enzyme IIB-cellobiose-- 51735_48179_51971_ 51735_48179_51971_ B_3 3_1_2 3 A_993 B_8798 E_3827 --A_71 B_674 E_226 --A_47 B_404 E_155 -- endn 48179_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--6-phosphogluconate dehydrogenase C-terminal domain-like--Nucleotide-binding domain-- 49785_81296_48208_ 49785_81296_48208_ B_2 3_1_2 2 A_10 B_366 E_724 --A_40 B_404 E_1207 --A_67 B_360 E_274 -- endn 63446_endc NOTPDB CPL Galactose-binding domain-like--E set domains--Six-hairpin glycosyltransferases-- 53795_50331_52540_ 53795_50331_52540_ B_7 3_1_2 7 A_421 B_3843 E_485 --A_61 B_521 E_45 --A_2129 B_14320 E_12913 -- endn endc_99999 NOTPDB CPL PEP carboxykinase-like--MOP-like--P-loop containing nucleotide triphosphate hydrolases-- 48452_53756_53756_ 48452_53756_53756_ B_2 3_2_1 2 A_146 B_1937 E_3442 --A_262 B_1575 E_1122 --A_262 B_1575 E_1122 -- endn_99999 endc NOTPDB RPT TPR-like--UDP-Glycosyltransferase/glycogen phosphorylase--UDP-Glycosyltransferase/glycogen phosphorylase-- 56801_56645_47203_ 56801_56645_47203_ B_2 3_1_2 2 A_139 B_882 E_563 --A_70 B_599 E_245 --A_62 B_573 E_243 -- endn endc_99999 NOTPDB CPL Firefly luciferase-like--Acyl-CoA dehydrogenase NM domain-like--Acyl-CoA dehydrogenase C-terminal domain-like-- 51230_51230_51230_ 51230_51230_51230_ B_11 3_1_2 11 A_35 B_1330 E_195 --A_35 B_1330 E_195 --A_35 B_1330 E_195 -- endn 47005_99999 NOTPDB RPT Single hybrid motif--Single hybrid motif--Single hybrid motif-- 55781_52540_46689_ 55781_52540_46689_ B_12 5_3_2 12 A_54 B_1030 E_131 --A_2129 B_14320 E_12913 --A_246 B_4125 E_4002 -- endn_55781_99999 endc_46689 NOTPDB CPL GAF domain-like--P-loop containing nucleotide triphosphate hydrolases--Homeodomain-like-- 54806_54806_50494_ 54806_54806_50494_ B_5 5_2_3 5 A_2 B_14 E_3 --A_2 B_14 E_3 --A_19 B_482 E_1600 -- endn_99999 51055_endc_99999 NOTPDB RPT Alpha-lytic protease prodomain--Alpha-lytic protease prodomain--Trypsin-like serine proteases-- 54292_54862_53920_ 54292_54862_53920_ B_3 3_2_1 3 A_44 B_565 E_187 --A_411 B_743 E_103 --A_2 B_18 E_34 -- endn_99999 endc INPDB CPL 2Fe-2S ferredoxin-like--4Fe-4S ferredoxins--Fe-only hydrogenase-- 56281_52218_57802_ 56281_52218_57802_ B_6 3_1_2 6 A_273 B_950 E_318 --A_110 B_706 E_157 --A_77 B_171 E_177 -- endn endc_51905 NOTPDB CPL Metallo-hydrolase/oxidoreductase--Flavoproteins--Rubredoxin-like-- 55186_52540_52540_ 55186_52540_52540_ B_2 3_2_1 2 A_42 B_237 E_81 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- 81271_99999 endc NOTPDB RPT Threonyl-tRNA synthetase (ThrRS), second 'additional' domain--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 52540_63882_53218_ 52540_63882_53218_ B_3 3_1_2 3 A_2129 B_14320 E_12913 --A_38 B_93 E_30 --A_63 B_253 E_54 -- endn 52540_63867 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains--Molybdenum cofactor biosynthesis proteins-- 56112_54184_54184_ 56112_54184_54184_ B_4 3_1_2 4 A_114 B_971 E_9319 --A_7 B_84 E_2 --A_7 B_84 E_2 -- endn 54184_99999 NOTPDB RPT Protein kinase-like (PK-like)--Penicillin-binding protein 2x (pbp-2x), c-terminal domain--Penicillin-binding protein 2x (pbp-2x), c-terminal domain-- 56801_47336_51161_ 56801_47336_51161_ B_2 3_1_2 2 A_139 B_882 E_563 --A_4 B_486 E_88 --A_81 B_714 E_168 -- endn 51161_99999 NOTPDB CPL Firefly luciferase-like--ACP-like--Trimeric LpxA-like enzymes-- 47005_47005_52777_ 47005_47005_52777_ B_5 3_2_1 5 A_6 B_185 E_52 --A_6 B_185 E_52 --A_10 B_418 E_328 -- 51230_endn endc NOTPDB RPT Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex--Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex--CoA-dependent acyltransferases-- 56784_74650_48208_ 56784_74650_48208_ B_2 3_2_1 2 A_230 B_1745 E_1267 --A_8 B_214 E_72 --A_67 B_360 E_274 -- endn_99999 endc NOTPDB CPL HAD-like--Galactose mutarotase-like--Six-hairpin glycosyltransferases-- 82057_82057_82057_ 82057_82057_82057_ B_9 5_3_2 9 B_31 E_5 --B_31 E_5 --B_31 E_5 -- 81296_55846_53955 82057_endc INPDB RPT GW domain--GW domain--GW domain-- 54862_51971_51971_ 54862_51971_51971_ B_3 4_2_2 3 A_411 B_743 E_103 --A_47 B_404 E_155 --A_47 B_404 E_155 -- endn_54862 endc_99999 NOTPDB RPT 4Fe-4S ferredoxins--Nucleotide-binding domain--Nucleotide-binding domain-- 55021_55021_56784_ 55021_55021_56784_ B_4 3_2_1 4 A_109 B_662 E_147 --A_109 B_662 E_147 --A_230 B_1745 E_1267 -- endn_99999 endc NOTPDB RPT Regulatory domain in the aminoacid metabolism--Regulatory domain in the aminoacid metabolism--HAD-like-- 51120_51120_51120_ 51120_51120_51120_ B_8 5_2_3 8 B_123 E_18 --B_123 E_18 --B_123 E_18 -- endn_99999 51120_endc_99999 NOTPDB RPT Serralysin-like metalloprotease, C-terminal domain--Serralysin-like metalloprotease, C-terminal domain--Serralysin-like metalloprotease, C-terminal domain-- 51230_56954_49373_ 51230_56954_49373_ B_9 5_3_2 9 A_35 B_1330 E_195 --B_451 E_40 --A_20 B_171 E_29 -- 51230_endn_99999 endc_99999 NOTPDB CPL Single hybrid motif--Integral outer membrane protein TolC, efflux pump component--Invasin/intimin cell-adhesion fragments-- 55785_52540_48283_ 55785_52540_48283_ B_10 6_5_1 10 A_168 B_1284 E_394 --A_2129 B_14320 E_12913 --B_220 E_14 -- 53901_endn_55781_99999_55785 endc NOTPDB CPL PYP-like sensor domain (PAS domain)--P-loop containing nucleotide triphosphate hydrolases--FIS-like-- 46626_46626_48695_ 46626_46626_48695_ B_3 4_2_2 3 A_40 B_894 E_220 --A_40 B_894 E_220 --A_18 B_378 E_163 -- 46626_99999 46626_endc NOTPDB RPT Cytochrome c--Cytochrome c--Multiheme cytochromes-- 53955_54106_54106_ 53955_54106_54106_ B_14 5_3_2 14 A_9 B_652 E_194 --B_368 E_99 --B_368 E_99 -- endn_53955_99999 54106_endc NOTPDB RPT Lysozyme-like--LysM domain--LysM domain-- 46785_53067_53067_ 46785_53067_53067_ B_4 3_1_2 4 A_1241 B_7979 E_2143 --A_176 B_1667 E_1029 --A_176 B_1667 E_1029 -- endn endc_99999 NOTPDB RPT "Winged helix" DNA-binding domain--Actin-like ATPase domain--Actin-like ATPase domain-- 52540_63520_53062_ 52540_63520_53062_ B_17 6_2_4 17 A_2129 B_14320 E_12913 --B_147 E_5 --B_129 E_2 -- endn_46785 52540_55804_52794_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--PTS-regulatory domain, PRD--IIA domain of mannose transporter, IIA-Man-- 53955_82057_82057_ 53955_82057_82057_ B_6 3_1_2 6 A_9 B_652 E_194 --B_31 E_5 --B_31 E_5 -- endn 82057_endc NOTPDB RPT Lysozyme-like--GW domain--GW domain-- 55021_55785_52540_ 55021_55785_52540_ B_16 3_1_2 16 A_109 B_662 E_147 --A_168 B_1284 E_394 --A_2129 B_14320 E_12913 -- endn endc_46689 NOTPDB CPL Regulatory domain in the aminoacid metabolism--PYP-like sensor domain (PAS domain)--P-loop containing nucleotide triphosphate hydrolases-- 52172_52540_46689_ 52172_52540_46689_ B_83 4_3_1 83 A_85 B_3166 E_241 --A_2129 B_14320 E_12913 --A_246 B_4125 E_4002 -- endn_46689_99999 endc NOTPDB CPL CheY-like--P-loop containing nucleotide triphosphate hydrolases--Homeodomain-like-- 52540_52540_81296_ 52540_52540_81296_ B_3 3_2_1 3 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --A_40 B_404 E_1207 -- endn_99999 endc NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--E set domains-- 55785_46689_46689_ 55785_46689_46689_ B_13 3_2_1 13 A_168 B_1284 E_394 --A_246 B_4125 E_4002 --A_246 B_4125 E_4002 -- endn_99999 endc NOTPDB RPT PYP-like sensor domain (PAS domain)--Homeodomain-like--Homeodomain-like-- 54292_46548_53920_ 54292_46548_53920_ B_2 3_1_2 2 A_44 B_565 E_187 --A_125 B_477 E_67 --A_2 B_18 E_34 -- endn 53271_endc NOTPDB CPL 2Fe-2S ferredoxin-like--alpha-helical ferredoxin--Fe-only hydrogenase-- 55594_47831_52009_ 55594_47831_52009_ B_16 6_4_2 16 B_137 E_2 --B_111 E_6 --A_27 B_221 E_13 -- 55804_endn_53062_51261 51621_endc NOTPDB CPL HPr-like--Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain--Phosphohistidine domain-- 55874_52172_48283_ 55874_52172_48283_ B_3 4_2_2 3 A_178 B_2970 E_398 --A_85 B_3166 E_241 --B_220 E_14 -- 47384_99999 46689_99999 NOTPDB CPL ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase--CheY-like--FIS-like-- 46894_48452_52540_ 46894_48452_52540_ B_2 3_1_2 2 A_87 B_1032 E_48 --A_146 B_1937 E_3442 --A_2129 B_14320 E_12913 -- endn endc_99999 NOTPDB CPL C-terminal effector domain of the bipartite response regulators--TPR-like--P-loop containing nucleotide triphosphate hydrolases-- 51230_56954_50998_ 51230_56954_50998_ B_4 4_3_1 4 A_35 B_1330 E_195 --B_451 E_40 --A_73 B_392 E_284 -- 51230_endn_99999 endc NOTPDB CPL Single hybrid motif--Integral outer membrane protein TolC, efflux pump component--Quinoprotein alcohol dehydrogenase-like-- 75138_54631_54631_ 75138_54631_54631_ B_18 4_2_2 18 A_4 B_98 E_2 --A_209 B_782 E_239 --A_209 B_782 E_239 -- 56053_46785 54637_99999 NOTPDB RPT HPr kinase/phoshatase HprK N-terminal domain--CBS-domain--CBS-domain-- 55781_55785_55874_ 55781_55785_55874_ B_7 4_2_2 7 A_54 B_1030 E_131 --A_168 B_1284 E_394 --A_178 B_2970 E_398 -- endn_99999 52172_endc NOTPDB CPL GAF domain-like--PYP-like sensor domain (PAS domain)--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 55073_52964_48452_ 55073_52964_48452_ B_6 3_1_2 6 A_5 B_639 E_400 --A_1 B_66 E_1 --A_146 B_1937 E_3442 -- endn endc_99999 NOTPDB CPL Adenylyl and guanylyl cyclase catalytic domain--TolB, N-terminal domain--TPR-like-- 52172_47384_55874_ 52172_47384_55874_ B_35 6_3_3 35 A_85 B_3166 E_241 --A_45 B_1750 E_74 --A_178 B_2970 E_398 -- endn_99999_55874 52172_endc_99999 NOTPDB CPL CheY-like--Homodimeric domain of signal transducing histidine kinase--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 75138_54631_64182_ 75138_54631_64182_ B_5 3_2_1 5 A_4 B_98 E_2 --A_209 B_782 E_239 --A_75 B_234 E_33 -- 75138_54631 endc NOTPDB CPL HPr kinase/phoshatase HprK N-terminal domain--CBS-domain--DHH phosphoesterases-- 47336_53901_53901_ 47336_53901_53901_ B_28 7_4_3 28 A_4 B_486 E_88 --A_95 B_891 E_374 --A_95 B_891 E_374 -- endn_51735_52151_99999 endc_52151_53850 NOTPDB RPT ACP-like--Thiolase-like--Thiolase-like-- 55021_50814_56784_ 55021_50814_56784_ B_2 3_2_1 2 A_109 B_662 E_147 --A_14 B_98 E_391 --A_230 B_1745 E_1267 -- endn_99999 endc NOTPDB CPL Regulatory domain in the aminoacid metabolism--Lipocalins--HAD-like-- 54184_54184_54184_ 54184_54184_54184_ B_7 5_2_3 7 A_7 B_84 E_2 --A_7 B_84 E_2 --A_7 B_84 E_2 -- 99999_56112 54184_endc_99999 NOTPDB RPT Penicillin-binding protein 2x (pbp-2x), c-terminal domain--Penicillin-binding protein 2x (pbp-2x), c-terminal domain--Penicillin-binding protein 2x (pbp-2x), c-terminal domain-- 46894_52964_48452_ 46894_52964_48452_ B_4 4_2_2 4 A_87 B_1032 E_48 --A_1 B_66 E_1 --A_146 B_1937 E_3442 -- endn_99999 endc_99999 NOTPDB CPL C-terminal effector domain of the bipartite response regulators--TolB, N-terminal domain--TPR-like-- 55781_55785_52540_ 55781_55785_52540_ B_16 5_2_3 16 A_54 B_1030 E_131 --A_168 B_1284 E_394 --A_2129 B_14320 E_12913 -- endn_99999 48283_46785_46689 NOTPDB CPL GAF domain-like--PYP-like sensor domain (PAS domain)--P-loop containing nucleotide triphosphate hydrolases-- 55804_55804_55594_ 55804_55804_55594_ B_13 4_1_3 13 A_2 B_304 E_123 --A_2 B_304 E_123 --B_137 E_2 -- endn endc_99999_47831 NOTPDB RPT Phoshotransferase/anion transport protein--Phoshotransferase/anion transport protein--HPr-like-- 52540_52540_53795_ 52540_52540_53795_ B_10 5_2_3 10 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --A_421 B_3843 E_485 -- 52540_endn 53795_endc_99999 NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--PEP carboxykinase-like-- 55785_55781_81606_ 55785_55781_81606_ B_8 5_3_2 8 A_168 B_1284 E_394 --A_54 B_1030 E_131 --A_2 B_180 E_410 -- endn_55781_55785 endc_55874 NOTPDB CPL PYP-like sensor domain (PAS domain)--GAF domain-like--Protein serine/threonine phosphatase 2C, catalytic domain-- 54631_54631_55785_ 54631_54631_55785_ B_5 6_2_4 5 A_209 B_782 E_239 --A_209 B_782 E_239 --A_168 B_1284 E_394 -- endn_54631 52540_55781_99999_55785 NOTPDB RPT CBS-domain--CBS-domain--PYP-like sensor domain (PAS domain)-- 63882_53218_52540_ 63882_53218_52540_ B_2 3_2_1 2 A_38 B_93 E_30 --A_63 B_253 E_54 --A_2129 B_14320 E_12913 -- 52540_99999 endc NOTPDB CPL Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains--Molybdenum cofactor biosynthesis proteins--P-loop containing nucleotide triphosphate hydrolases-- 46785_63520_63520_ 46785_63520_63520_ B_28 10_6_4 28 A_1241 B_7979 E_2143 --B_147 E_5 --B_147 E_5 -- 46894_81301_46955_46785_46689_99999 52218_55804_52794_99999 NOTPDB RPT "Winged helix" DNA-binding domain--PTS-regulatory domain, PRD--PTS-regulatory domain, PRD-- 52540_46689_46689_ 52540_46689_46689_ B_2 3_2_1 2 A_2129 B_14320 E_12913 --A_246 B_4125 E_4002 --A_246 B_4125 E_4002 -- endn_55781 endc NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--Homeodomain-like--Homeodomain-like-- 51905_51735_51735_ 51905_51735_51735_ B_3 6_3_3 3 A_358 B_2910 E_1243 --A_993 B_8798 E_3827 --A_993 B_8798 E_3827 -- 51230_endn_99999 endc_51735_99999 NOTPDB RPT FAD/NAD(P)-binding domain--NAD(P)-binding Rossmann-fold domains--NAD(P)-binding Rossmann-fold domains-- 52172_52172_55073_ 52172_52172_55073_ B_13 3_2_1 13 A_85 B_3166 E_241 --A_85 B_3166 E_241 --A_5 B_639 E_400 -- 50249_endn endc NOTPDB RPT CheY-like--CheY-like--Adenylyl and guanylyl cyclase catalytic domain-- 55073_52540_52540_ 55073_52540_52540_ B_4 3_1_2 4 A_5 B_639 E_400 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn 48452_99999 NOTPDB RPT Adenylyl and guanylyl cyclase catalytic domain--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 47831_52009_51621_ 47831_52009_51621_ B_107 7_5_2 107 B_111 E_6 --A_27 B_221 E_13 --A_75 B_609 E_182 -- 53223_endn_55594_55781_99999 55804_endc NOTPDB CPL Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain--Phosphohistidine domain--Phosphoenolpyruvate/pyruvate domain-- 47413_52540_52540_ 47413_52540_52540_ B_2 3_1_2 2 A_123 B_1973 E_199 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn 52540_endc NOTPDB RPT lambda repressor-like DNA-binding domains--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 55785_52540_46689_ 55785_52540_46689_ B_65 8_7_1 65 A_168 B_1284 E_394 --A_2129 B_14320 E_12913 --A_246 B_4125 E_4002 -- 55021_endn_54631_55594_55781_99999_55785 endc NOTPDB CPL PYP-like sensor domain (PAS domain)--P-loop containing nucleotide triphosphate hydrolases--Homeodomain-like-- 52540_52540_48019_ 52540_52540_48019_ B_3 3_1_2 3 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --A_24 B_335 E_97 -- endn endc_99999 NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--DNA polymerase III clamp loader subunits, C-terminal domain-- 56801_47336_53474_ 56801_47336_53474_ B_26 3_2_1 26 A_139 B_882 E_563 --A_4 B_486 E_88 --A_141 B_2949 E_2909 -- endn_52777 endc NOTPDB CPL Firefly luciferase-like--ACP-like--alpha/beta-Hydrolases-- 54862_51971_51735_ 54862_51971_51735_ B_3 3_1_2 3 A_411 B_743 E_103 --A_47 B_404 E_155 --A_993 B_8798 E_3827 -- endn endc_99999 NOTPDB CPL 4Fe-4S ferredoxins--Nucleotide-binding domain--NAD(P)-binding Rossmann-fold domains-- 51569_51269_51658_ 51569_51269_51658_ B_3 3_2_1 3 A_136 B_1089 E_356 --A_4 B_49 E_9 --A_102 B_575 E_65 -- endn_99999 endc NOTPDB CPL Aldolase--Type III antifreeze protein--Xylose isomerase-like-- 81464_49503_46626_ 81464_49503_46626_ B_17 4_1_3 17 A_5 B_102 E_21 --A_81 B_368 E_450 --A_40 B_894 E_220 -- endn 46626_endc_99999 NOTPDB CPL Cytochrome c oxidase subunit II-like, transmembrane region--Cupredoxins--Cytochrome c-- 48329_48329_46894_ 48329_48329_46894_ B_10 3_2_1 10 A_9 B_1007 E_45 --A_9 B_1007 E_45 --A_87 B_1032 E_48 -- endn_99999 endc NOTPDB RPT RNA polymerase sigma subunit--RNA polymerase sigma subunit--C-terminal effector domain of the bipartite response regulators-- 46689_53155_46894_ 46689_53155_46894_ B_3 3_2_1 3 A_246 B_4125 E_4002 --A_7 B_98 E_8 --A_87 B_1032 E_48 -- 57884_46689 endc NOTPDB CPL Homeodomain-like--Methylated DNA-protein cysteine methyltransferase domain--C-terminal effector domain of the bipartite response regulators-- 48024_52540_51294_ 48024_52540_51294_ B_5 3_1_2 5 A_1 B_120 E_1 --A_2129 B_14320 E_12913 --A_61 B_50 E_53 -- endn 99999_55608 NOTPDB CPL N-terminal domain of DnaB helicase--P-loop containing nucleotide triphosphate hydrolases--Hedgehog/intein (Hint) domain-- 54106_54106_53474_ 54106_54106_53474_ B_2 3_2_1 2 B_368 E_99 --B_368 E_99 --A_141 B_2949 E_2909 -- endn_54106 endc NOTPDB RPT LysM domain--LysM domain--alpha/beta-Hydrolases-- 48435_48435_53955_ 48435_48435_53955_ B_2 4_2_2 2 B_39 E_2 --B_39 E_2 --A_9 B_652 E_194 -- endn_99999 endc_99999 NOTPDB RPT Bacterial muramidases--Bacterial muramidases--Lysozyme-like-- 47226_47384_55874_ 47226_47384_55874_ B_4 4_2_2 4 A_9 B_246 E_33 --A_45 B_1750 E_74 --A_178 B_2970 E_398 -- endn_99999 50341_52172 NOTPDB CPL Histidine-containing phosphotransfer domain, HPT domain--Homodimeric domain of signal transducing histidine kinase--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 51735_51735_52283_ 51735_51735_52283_ B_3 5_2_3 3 A_993 B_8798 E_3827 --A_993 B_8798 E_3827 --A_53 B_465 E_206 -- endn_99999 51735_endc_99999 NOTPDB RPT NAD(P)-binding Rossmann-fold domains--NAD(P)-binding Rossmann-fold domains--Formate/glycerate dehydrogenase catalytic domain-like-- 48452_48435_53955_ 48452_48435_53955_ B_2 4_2_2 2 A_146 B_1937 E_3442 --B_39 E_2 --A_9 B_652 E_194 -- endn_99999 endc_99999 NOTPDB CPL TPR-like--Bacterial muramidases--Lysozyme-like-- 56300_55816_50998_ 56300_55816_50998_ B_2 3_2_1 2 A_170 B_837 E_750 --A_5 B_129 E_30 --A_73 B_392 E_284 -- endn_99999 endc NOTPDB CPL Metallo-dependent phosphatases--5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain--Quinoprotein alcohol dehydrogenase-like-- 56091_52540_52540_ 56091_52540_52540_ B_2 3_1_2 2 A_34 B_180 E_92 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn 52540_endc NOTPDB RPT DNA ligase/mRNA capping enzyme, catalytic domain--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 46689_53098_50610_ 46689_53098_50610_ B_6 5_3_2 6 A_246 B_4125 E_4002 --A_290 B_2494 E_2335 --B_6 -- endn_99999_46689 endc_99999 NOTPDB CPL Homeodomain-like--Ribonuclease H-like--mu transposase, C-terminal domain-- 52172_52172_47226_ 52172_52172_47226_ B_30 4_2_2 30 A_85 B_3166 E_241 --A_85 B_3166 E_241 --A_9 B_246 E_33 -- 53271_55874 endc_99999 NOTPDB RPT CheY-like--CheY-like--Histidine-containing phosphotransfer domain, HPT domain-- 53335_51971_54373_ 53335_51971_54373_ B_3 4_2_2 3 A_733 B_3918 E_2070 --A_47 B_404 E_155 --A_16 B_381 E_311 -- endn_99999 endc_99999 NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--Nucleotide-binding domain--FAD-linked reductases, C-terminal domain-- 69705_50249_54814_ 69705_50249_54814_ B_97 3_1_2 97 A_1 B_101 --A_390 B_2734 E_1438 --A_82 B_390 E_98 -- endn 54791_54814 INPDB CPL Transcription factor NusA, N-terminal domain--Nucleic acid-binding proteins--Prokaryotic type KH domain (pKH-domain)-- 50249_56037_46955_ 50249_56037_46955_ B_92 6_4_2 92 A_390 B_2734 E_1438 --A_22 B_111 E_25 --A_55 B_784 E_148 -- 55681_endn_55008_99999 55681_99999 INPDB CPL Nucleic acid-binding proteins--B3/B4 domain of PheRS, PheT--Putative DNA-binding domain-- 82693_82714_82693_ 82693_82714_82693_ B_5 4_2_2 5 A_3 B_362 E_31 --B_354 E_19 --A_3 B_362 E_31 -- 82693_99999 82866_99999 NOTPDB CPL Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains--Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains--Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains-- 51445_51011_49785_ 51445_51011_49785_ B_2 3_1_2 2 A_89 B_1646 E_1474 --A_17 B_377 E_212 --A_10 B_366 E_724 -- endn endc_50370 NOTPDB CPL (Trans)glycosidases--alpha-Amylases, C-terminal beta-sheet domain--Galactose-binding domain-like-- 51366_52540_46689_ 51366_52540_46689_ B_2 3_2_1 2 A_289 B_986 E_160 --A_2129 B_14320 E_12913 --A_246 B_4125 E_4002 -- endn_51905 endc NOTPDB CPL Ribulose-phoshate binding barrel--P-loop containing nucleotide triphosphate hydrolases--Homeodomain-like-- 53850_47384_55874_ 53850_47384_55874_ B_13 6_3_3 13 A_257 B_5627 E_740 --A_45 B_1750 E_74 --A_178 B_2970 E_398 -- endn_53850_99999 52172_endc_99999 NOTPDB CPL Periplasmic binding protein-like II--Homodimeric domain of signal transducing histidine kinase--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 52172_52172_52172_ 52172_52172_52172_ B_11 5_3_2 11 A_85 B_3166 E_241 --A_85 B_3166 E_241 --A_85 B_3166 E_241 -- endn_99999_55874 endc_99999 NOTPDB RPT CheY-like--CheY-like--CheY-like-- 81935_51730_53720_ 81935_51730_53720_ B_27 5_3_2 27 B_31 --A_11 B_130 E_62 --A_55 B_835 E_336 -- 47598_endn_99999 endc_99999 NOTPDB CPL N-terminal domain of bifunctional PutA protein--FAD-linked oxidoreductase--ALDH-like-- 52777_52777_47336_ 52777_52777_47336_ B_7 4_2_2 7 A_10 B_418 E_328 --A_10 B_418 E_328 --A_4 B_486 E_88 -- endn_47336 53474_endc NOTPDB RPT CoA-dependent acyltransferases--CoA-dependent acyltransferases--ACP-like-- 51445_52317_51011_ 51445_52317_51011_ B_8 3_2_1 8 A_89 B_1646 E_1474 --A_204 B_1244 E_262 --A_17 B_377 E_212 -- endn_75005 endc INPDB CPL (Trans)glycosidases--Class I glutamine amidotransferase-like--alpha-Amylases, C-terminal beta-sheet domain-- 52540_51604_52540_ 52540_51604_52540_ B_2 3_2_1 2 A_2129 B_14320 E_12913 --A_64 B_382 E_137 --A_2129 B_14320 E_12913 -- endn_57701 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Enolase C-terminal domain-like--P-loop containing nucleotide triphosphate hydrolases-- 55781_55781_55785_ 55781_55781_55785_ B_4 7_3_4 4 A_54 B_1030 E_131 --A_54 B_1030 E_131 --A_168 B_1284 E_394 -- 55781_99999_55785 55781_47384_55073_99999 NOTPDB RPT GAF domain-like--GAF domain-like--PYP-like sensor domain (PAS domain)-- 55781_52540_48283_ 55781_52540_48283_ B_17 5_4_1 17 A_54 B_1030 E_131 --A_2129 B_14320 E_12913 --B_220 E_14 -- endn_55781_49879_99999 endc NOTPDB CPL GAF domain-like--P-loop containing nucleotide triphosphate hydrolases--FIS-like-- 51230_56954_51261_ 51230_56954_51261_ B_4 3_2_1 4 A_35 B_1330 E_195 --B_451 E_40 --A_11 B_271 E_40 -- endn_99999 endc NOTPDB CPL Single hybrid motif--Integral outer membrane protein TolC, efflux pump component--Duplicated hybrid motif-- 52540_46600_52540_ 52540_46600_52540_ B_6 4_3_1 6 A_2129 B_14320 E_12913 --A_10 B_212 E_6 --A_2129 B_14320 E_12913 -- 57716_57903_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--C-terminal UvrC-binding domain of UvrB--P-loop containing nucleotide triphosphate hydrolases-- 55781_55785_55073_ 55781_55785_55073_ B_5 6_3_3 5 A_54 B_1030 E_131 --A_168 B_1284 E_394 --A_5 B_639 E_400 -- endn_55781_55785 48452_endc_99999 NOTPDB CPL GAF domain-like--PYP-like sensor domain (PAS domain)--Adenylyl and guanylyl cyclase catalytic domain-- 53335_52540_52540_ 53335_52540_52540_ B_2 3_1_2 2 A_733 B_3918 E_2070 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn 46600_99999 NOTPDB RPT S-adenosyl-L-methionine-dependent methyltransferases--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 46579_55785_55785_ 46579_55785_55785_ B_2 3_1_2 2 A_61 B_31 E_251 --A_168 B_1284 E_394 --A_168 B_1284 E_394 -- endn 47384_55785 NOTPDB RPT Prefoldin--PYP-like sensor domain (PAS domain)--PYP-like sensor domain (PAS domain)-- 53448_53448_53756_ 53448_53448_53756_ B_4 3_2_1 4 A_346 B_1868 E_1125 --A_346 B_1868 E_1125 --A_262 B_1575 E_1122 -- 53448_53756 endc NOTPDB RPT Nucleotide-diphospho-sugar transferases--Nucleotide-diphospho-sugar transferases--UDP-Glycosyltransferase/glycogen phosphorylase-- 50129_51735_47336_ 50129_51735_47336_ B_3 4_2_2 3 A_67 B_883 E_442 --A_993 B_8798 E_3827 --A_4 B_486 E_88 -- endn_53474 endc_99999 NOTPDB CPL GroES-like--NAD(P)-binding Rossmann-fold domains--ACP-like-- C 509 48065_50729_57889_ 48065_50729_57889_ E_20 6_3_3 20 A_3 B_7 E_597 --A_14 B_44 E_3057 --A_7 B_6 E_663 -- endn_47576_99999 50044_55550_99999 NOTPDB CPL DBL homology domain (DH-domain)--PH domain-like--Cysteine-rich domain-- 54001_49758_47473_ 54001_49758_47473_ E_44 4_2_2 44 A_60 B_262 E_1838 --B_4 E_128 --A_51 B_190 E_2808 -- endn_99999 endc_99999 INPDB CPL Cysteine proteinases--Calpain large subunit, middle domain (domain III)--EF-hand-- 57889_57889_57889_ 57889_57889_57889_ E_71 10_6_4 71 A_7 B_6 E_663 --A_7 B_6 E_663 --A_7 B_6 E_663 -- endn_81296_57903_57889_57850_99999 57903_endc_57889_99999 NOTPDB RPT Cysteine-rich domain--Cysteine-rich domain--Cysteine-rich domain-- 57625_57625_57625_ 57625_57625_57625_ E_88 8_4_4 88 B_2 E_246 --B_2 E_246 --B_2 E_246 -- 57625_57440_endn_99999 57625_endc_51445_99999 NOTPDB RPT Tachycitin--Tachycitin--Tachycitin-- 82153_57184_57196_ 82153_57184_57196_ E_2 3_1_2 2 A_4 B_33 E_126 --B_4 E_859 --A_2 B_7 E_2358 -- endn 57196_99999 NOTPDB CPL FAS1 domain--Growth factor receptor domain--EGF/Laminin-- 48065_50729_50729_ 48065_50729_50729_ E_12 3_2_1 12 A_3 B_7 E_597 --A_14 B_44 E_3057 --A_14 B_44 E_3057 -- endn_99999 endc NOTPDB RPT DBL homology domain (DH-domain)--PH domain-like--PH domain-like-- 57535_57535_57196_ 57535_57535_57196_ E_13 8_3_5 13 B_3 E_582 --B_3 E_582 --A_2 B_7 E_2358 -- 49899_57256_57535 57196_49785_endc_99999_57535 NOTPDB RPT Complement control module/SCR domain--Complement control module/SCR domain--EGF/Laminin-- 50405_50405_50405_ 50405_50405_50405_ E_15 7_4_3 15 A_2 B_20 E_82 --A_2 B_20 E_82 --A_2 B_20 E_82 -- endn_50405_50353_99999 50405_endc_99999 INPDB RPT Actin-crosslinking proteins--Actin-crosslinking proteins--Actin-crosslinking proteins-- 57016_57016_57016_ 57016_57016_57016_ E_3 5_3_2 3 B_1 E_48 --B_1 E_48 --B_1 E_48 -- 57016_51445_99999 endc_57016 INPDB RPT Plant lectins/antimicrobial peptides--Plant lectins/antimicrobial peptides--Plant lectins/antimicrobial peptides-- 57716_57716_48695_ 57716_57716_48695_ E_23 4_2_2 23 A_72 B_426 E_2067 --A_72 B_426 E_2067 --A_18 B_378 E_163 -- endn_99999 57716_50156 NOTPDB RPT Glucocorticoid receptor-like (DNA-binding domain)--Glucocorticoid receptor-like (DNA-binding domain)--Multiheme cytochromes-- 49313_49313_49899_ 49313_49313_49899_ E_19 5_3_2 19 A_3 B_17 E_754 --A_3 B_17 E_754 --A_22 B_208 E_1314 -- endn_49313_99999 49899_99999 NOTPDB RPT Cadherin--Cadherin--Concanavalin A-like lectins/glucanases-- 54791_54814_54791_ 54791_54814_54791_ E_20 5_2_3 20 A_38 B_130 E_562 --A_82 B_390 E_98 --A_38 B_130 E_562 -- 54791_99999 54791_endc_99999 NOTPDB CPL Eukaryotic type KH-domain (eKH-domain)--Prokaryotic type KH domain (pKH-domain)--Eukaryotic type KH-domain (eKH-domain)-- 57850_57845_47240_ 57850_57845_47240_ E_2 3_1_2 2 A_19 B_52 E_3605 --E_367 --A_126 B_660 E_337 -- endn endc_99999 NOTPDB CPL RING finger domain, C3HC4--B-box zinc-binding domain--Ferritin-like-- 57535_57196_57196_ 57535_57196_57196_ E_10 6_3_3 10 B_3 E_582 --A_2 B_7 E_2358 --A_2 B_7 E_2358 -- 57196_endn_57535 57196_endc_99999 NOTPDB RPT Complement control module/SCR domain--EGF/Laminin--EGF/Laminin-- 54791_54791_54791_ 54791_54791_54791_ E_79 11_6_5 79 A_38 B_130 E_562 --A_38 B_130 E_562 --A_38 B_130 E_562 -- 54928_54791_endn_48508_54814_99999 54791_endc_51679_54814_99999 NOTPDB RPT Eukaryotic type KH-domain (eKH-domain)--Eukaryotic type KH-domain (eKH-domain)--Eukaryotic type KH-domain (eKH-domain)-- 52058_57184_52058_ 52058_57184_52058_ E_54 8_3_5 54 A_6 B_143 E_2568 --B_4 E_859 --A_6 B_143 E_2568 -- endn_49265_99999 57184_endc_56112_49265_99999 INPDB CPL L domain-like--Growth factor receptor domain--L domain-like-- 49879_56784_52540_ 49879_56784_52540_ E_6 3_1_2 6 A_4 B_172 E_486 --A_230 B_1745 E_1267 --A_2129 B_14320 E_12913 -- endn 52540_endc NOTPDB CPL SMAD/FHA domain--HAD-like--P-loop containing nucleotide triphosphate hydrolases-- 64268_50729_56024_ 64268_50729_56024_ E_7 4_2_2 7 B_5 E_392 --A_14 B_44 E_3057 --A_32 B_314 E_180 -- endn_99999 56024_99999 NOTPDB CPL PX domain--PH domain-like--Phospholipase D/nuclease-- 46785_46785_50156_ 46785_46785_50156_ E_4 5_2_3 4 A_1241 B_7979 E_2143 --A_1241 B_7979 E_2143 --A_28 B_534 E_1380 -- endn_50729 50156_endc_99999 NOTPDB RPT "Winged helix" DNA-binding domain--"Winged helix" DNA-binding domain--PDZ domain-like-- 47576_47576_46966_ 47576_47576_46966_ E_90 6_3_3 90 B_8 E_704 --B_8 E_704 --A_7 B_30 E_584 -- endn_50729_99999 46966_endc_99999 NOTPDB RPT Calponin-homology domain, CH-domain--Calponin-homology domain, CH-domain--Spectrin repeat-- 55620_55620_55083_ 55620_55620_55083_ E_2 3_1_2 2 A_26 B_318 E_66 --A_26 B_318 E_66 --B_106 E_9 -- endn 51717_99999 NOTPDB RPT Tetrahydrobiopterin biosynthesis enzymes-like--Tetrahydrobiopterin biosynthesis enzymes-like--6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK-- 49344_49742_49742_ 49344_49742_49742_ E_20 5_2_3 20 B_5 E_57 --B_5 E_66 --B_5 E_66 -- endn_99999 endc_49265_99999 NOTPDB RPT CBD9-like--PHM/PNGase F--PHM/PNGase F-- 52200_52540_52047_ 52200_52540_52047_ E_16 7_2_5 16 A_2 B_41 E_302 --A_2129 B_14320 E_12913 --A_9 B_93 E_2576 -- endn_99999 52540_52058_52075_endc_99999 NOTPDB CPL Toll/Interleukin receptor TIR domain--P-loop containing nucleotide triphosphate hydrolases--RNI-like-- 57535_57535_53300_ 57535_57535_53300_ E_36 6_2_4 36 B_3 E_582 --B_3 E_582 --A_51 B_345 E_996 -- endn_57535 50494_endc_99999_57535 NOTPDB RPT Complement control module/SCR domain--Complement control module/SCR domain--vWA-like-- 56003_54292_47741_ 56003_54292_47741_ E_2 4_2_2 2 A_22 B_115 E_81 --A_44 B_565 E_187 --A_8 B_97 E_63 -- endn_54665 46626_56176 NOTPDB CPL Molybdemum cofactor-binding domain--2Fe-2S ferredoxin-like--CO dehydrogenase ISP C-domain like-- 51445_54556_51445_ 51445_54556_51445_ E_3 4_2_2 3 A_89 B_1646 E_1474 --A_2 B_23 E_41 --A_89 B_1646 E_1474 -- 57625_99999 51445_99999 NOTPDB CPL (Trans)glycosidases--Chitinase insertion domain--(Trans)glycosidases-- 57889_57903_57889_ 57889_57903_57889_ E_11 7_4_3 11 A_7 B_6 E_663 --A_56 B_38 E_1435 --A_7 B_6 E_663 -- endn_57903_57889_99999 57903_57889_99999 NOTPDB CPL Cysteine-rich domain--FYVE/PHD zinc finger--Cysteine-rich domain-- 57302_57535_53300_ 57302_57535_53300_ E_2 3_2_1 2 A_3 B_7 E_578 --B_3 E_582 --A_51 B_345 E_996 -- endn_99999 endc NOTPDB CPL Snake toxin-like--Complement control module/SCR domain--vWA-like-- 56645_47203_47203_ 56645_47203_47203_ E_73 6_4_2 73 A_70 B_599 E_245 --A_62 B_573 E_243 --A_62 B_573 E_243 -- 47203_endn_51735_99999 endc_99999 INPDB RPT Acyl-CoA dehydrogenase NM domain-like--Acyl-CoA dehydrogenase C-terminal domain-like--Acyl-CoA dehydrogenase C-terminal domain-like-- 50630_47220_56672_ 50630_47220_56672_ E_3 4_1_3 3 A_15 B_69 E_1046 --A_6 B_4 E_147 --A_66 B_378 E_3164 -- endn 56672_endc_53098 NOTPDB CPL Acid proteases--alpha-catenin/vinculin--DNA/RNA polymerases-- 56112_48726_48726_ 56112_48726_48726_ E_13 4_2_2 13 A_114 B_971 E_9319 --A_14 B_78 E_4071 --A_14 B_78 E_4071 -- 99999_49265 48726_99999 NOTPDB RPT Protein kinase-like (PK-like)--Immunoglobulin--Immunoglobulin-- 57362_57362_50242_ 57362_57362_50242_ E_8 3_2_1 8 A_1 B_1 E_226 --A_1 B_1 E_226 --A_2 B_2 E_148 -- endn_48726 endc NOTPDB RPT BPTI-like--BPTI-like--TIMP-like-- 57196_50969_57196_ 57196_50969_57196_ E_3 5_3_2 3 A_2 B_7 E_2358 --A_24 B_218 E_336 --A_2 B_7 E_2358 -- 57196_57586_99999 endc_99999 NOTPDB CPL EGF/Laminin--YVTN repeat-like/Quinoprotein amine dehydrogenase--EGF/Laminin-- 74788_75632_46785_ 74788_75632_46785_ E_104 4_2_2 104 B_2 E_132 --A_1 B_1 E_144 --A_1241 B_7979 E_2143 -- endn_99999 52047_endc INPDB CPL Culin repeat--Culin homology domain--"Winged helix" DNA-binding domain-- 81383_52047_48371_ 81383_52047_48371_ E_2 3_1_2 2 B_8 E_2068 --A_9 B_93 E_2576 --A_73 B_255 E_3951 -- endn 48371_endc NOTPDB CPL F-box domain--RNI-like--ARM repeat-- 50044_48065_50729_ 50044_48065_50729_ E_37 8_4_4 37 A_2 B_84 E_1671 --A_3 B_7 E_597 --A_14 B_44 E_3057 -- endn_47576_50044_99999 48726_endc_49562_99999 NOTPDB CPL SH3-domain--DBL homology domain (DH-domain)--PH domain-like-- 57581_57196_57196_ 57581_57196_57196_ E_32 8_4_4 32 B_2 E_61 --A_2 B_7 E_2358 --A_2 B_7 E_2358 -- 57196_endn_57184_99999 57196_endc_57581_99999 NOTPDB RPT TB module/8-cys domain--EGF/Laminin--EGF/Laminin-- 47090_55486_50923_ 47090_55486_50923_ E_49 5_3_2 49 A_5 B_242 E_88 --A_64 B_735 E_1617 --A_1 B_15 E_170 -- 56436_endn_99999 endc_99999 NOTPDB CPL PGBD-like--Metalloproteases ("zincins"), catalytic domain--Hemopexin-like domain-- 48452_48452_53756_ 48452_48452_53756_ E_12 3_2_1 12 A_146 B_1937 E_3442 --A_146 B_1937 E_3442 --A_262 B_1575 E_1122 -- endn_99999 endc NOTPDB RPT TPR-like--TPR-like--UDP-Glycosyltransferase/glycogen phosphorylase-- 57716_48508_57716_ 57716_48508_57716_ E_5 5_3_2 5 A_72 B_426 E_2067 --A_1 B_10 E_1172 --A_72 B_426 E_2067 -- endn_48508_99999 48508_endc NOTPDB CPL Glucocorticoid receptor-like (DNA-binding domain)--Nuclear receptor ligand-binding domain--Glucocorticoid receptor-like (DNA-binding domain)-- 52058_52047_52058_ 52058_52047_52058_ E_14 11_5_6 14 A_6 B_143 E_2568 --A_9 B_93 E_2576 --A_6 B_143 E_2568 -- 49452_52047_endn_52058_99999 52047_52058_81606_endc_99999_56112 NOTPDB CPL L domain-like--RNI-like--L domain-like-- 54534_54534_47473_ 54534_54534_47473_ E_5 3_2_1 5 A_32 B_599 E_266 --A_32 B_599 E_266 --A_51 B_190 E_2808 -- 54534_99999 endc NOTPDB RPT FKBP-like--FKBP-like--EF-hand-- 50156_50044_52540_ 50156_50044_52540_ E_83 4_3_1 83 A_28 B_534 E_1380 --A_2 B_84 E_1671 --A_2129 B_14320 E_12913 -- endn_50156_99999 endc NOTPDB CPL PDZ domain-like--SH3-domain--P-loop containing nucleotide triphosphate hydrolases-- 57184_57196_57581_ 57184_57196_57581_ E_12 5_2_3 12 B_4 E_859 --A_2 B_7 E_2358 --B_2 E_61 -- 57196_99999 57196_57184_99999 NOTPDB CPL Growth factor receptor domain--EGF/Laminin--TB module/8-cys domain-- 56112_55681_52954_ 56112_55681_52954_ E_8 4_2_2 8 A_114 B_971 E_9319 --A_205 B_1250 E_450 --A_75 B_353 E_158 -- 56112_99999 endc_99999 NOTPDB CPL Protein kinase-like (PK-like)--Class II aaRS and biotin synthetases--Anticodon-binding domain of Class II aaRS-- 52058_52058_52058_ 52058_52058_52058_ E_42 10_5_5 42 A_6 B_143 E_2568 --A_6 B_143 E_2568 --A_6 B_143 E_2568 -- 52047_endn_52058_53098_99999 52047_52058_endc_56112_99999 NOTPDB RPT L domain-like--L domain-like--L domain-like-- 57196_57196_57581_ 57196_57196_57581_ E_35 6_3_3 35 A_2 B_7 E_2358 --A_2 B_7 E_2358 --B_2 E_61 -- 57196_57581_99999 57196_57184_99999 NOTPDB RPT EGF/Laminin--EGF/Laminin--TB module/8-cys domain-- 54862_57667_57667_ 54862_57667_57667_ E_3 4_2_2 3 A_411 B_743 E_103 --A_23 B_24 E_4849 --A_23 B_24 E_4849 -- endn_57667 57667_99999 NOTPDB RPT 4Fe-4S ferredoxins--C2H2 and C2HC zinc fingers--C2H2 and C2HC zinc fingers-- 50729_47473_51695_ 50729_47473_51695_ E_70 8_4_4 70 A_14 B_44 E_3057 --A_51 B_190 E_2808 --A_5 B_143 E_312 -- endn_50729_48371_99999 endc_49562_55550_99999 NOTPDB CPL PH domain-like--EF-hand--Phosphatidylinositol-specific phospholipase C (PI-PLC)-- 47095_47095_47095_ 47095_47095_47095_ E_11 5_2_3 11 A_2 B_16 E_689 --A_2 B_16 E_689 --A_2 B_16 E_689 -- 99999_46689 endc_47095_99999 NOTPDB RPT HMG-box--HMG-box--HMG-box-- 69179_53300_69318_ 69179_53300_69318_ E_6 3_1_2 6 A_2 B_11 E_172 --A_51 B_345 E_996 --A_6 B_79 E_181 -- endn 69179_endc NOTPDB CPL Integrin domains--vWA-like--Integrin alpha N-terminal domain-- 57424_57196_57196_ 57424_57196_57196_ E_72 9_2_7 72 E_497 --A_2 B_7 E_2358 --A_2 B_7 E_2358 -- endn_57424 69322_50969_63825_endc_69304_63829_99999 INPDB RPT LDL receptor-like module--EGF/Laminin--EGF/Laminin-- 49854_56487_49854_ 49854_56487_49854_ E_4 6_3_3 4 B_1 E_636 --B_1 E_193 --B_1 E_636 -- endn_56487_49854 56487_endc_99999 NOTPDB CPL Spermadhesin, CUB domain--Scavenger receptor cysteine-rich (SRCR) domain--Spermadhesin, CUB domain-- 55486_49854_49854_ 55486_49854_49854_ E_21 5_3_2 21 A_64 B_735 E_1617 --B_1 E_636 --B_1 E_636 -- endn_49410_99999 57196_endc NOTPDB RPT Metalloproteases ("zincins"), catalytic domain--Spermadhesin, CUB domain--Spermadhesin, CUB domain-- 49723_49723_49723_ 49723_49723_49723_ E_16 5_3_2 16 A_1 B_8 E_179 --A_1 B_8 E_179 --A_1 B_8 E_179 -- endn_49723_99999 49723_endc NOTPDB RPT Lipase/lipooxygenase domain (PLAT/LH2 domain)--Lipase/lipooxygenase domain (PLAT/LH2 domain)--Lipase/lipooxygenase domain (PLAT/LH2 domain)-- 51101_51101_51101_ 51101_51101_51101_ E_26 5_3_2 26 B_5 E_106 --B_5 E_106 --B_5 E_106 -- 51101_endn_99999 51101_endc NOTPDB RPT Mannose-binding lectins--Mannose-binding lectins--Mannose-binding lectins-- 54928_52540_52540_ 54928_52540_52540_ E_4 3_1_2 4 A_6 B_60 E_3471 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn endc_99999 NOTPDB RPT RNA-binding domain, RBD--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 54928_54928_63570_ 54928_54928_63570_ E_3 3_2_1 3 A_6 B_60 E_3471 --A_6 B_60 E_3471 --B_5 E_76 -- 54928_99999 endc NOTPDB RPT RNA-binding domain, RBD--RNA-binding domain, RBD--PABC (PABP) domain-- 51735_48179_50969_ 51735_48179_50969_ E_2 3_1_2 2 A_993 B_8798 E_3827 --A_71 B_674 E_226 --A_24 B_218 E_336 -- endn endc_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--6-phosphogluconate dehydrogenase C-terminal domain-like--YVTN repeat-like/Quinoprotein amine dehydrogenase-- 48726_48726_48726_ 48726_48726_48726_ E_1029 24_15_9 1029 A_14 B_78 E_4071 --A_14 B_78 E_4071 --A_14 B_78 E_4071 -- 53067_56436_endn_47769_51905_49265_52047_82671_54211_48726_52058_54975_48350_99999_56112 55116_63501_81296_endc_49265_48726_56487_99999_56112 INPDB RPT Immunoglobulin--Immunoglobulin--Immunoglobulin-- 57196_50494_82895_ 57196_50494_82895_ E_3 5_3_2 3 A_2 B_7 E_2358 --A_19 B_482 E_1600 --E_618 -- endn_57546_99999 endc_82895 NOTPDB CPL EGF/Laminin--Trypsin-like serine proteases--TSP-1 type 1 repeat-- 57467_47473_57283_ 57467_47473_57283_ E_5 6_3_3 5 A_2 B_8 E_358 --A_51 B_190 E_2808 --E_147 -- 57196_endn_99999 46626_endc_99999 NOTPDB CPL Ovomucoid/PCI-1 like inhibitors--EF-hand--PMP inhibitors-- 54637_54637_55961_ 54637_54637_55961_ E_8 4_2_2 8 A_51 B_906 E_213 --A_51 B_906 E_213 --A_9 B_245 E_370 -- endn_99999 endc_99999 NOTPDB RPT Thioesterase/thiol ester dehydrase-isomerase--Thioesterase/thiol ester dehydrase-isomerase--Bet v1-like-- 52317_52440_56059_ 52317_52440_56059_ E_18 4_2_2 18 A_204 B_1244 E_262 --A_71 B_698 E_210 --A_192 B_1104 E_490 -- 52021_99999 endc_48108 NOTPDB CPL Class I glutamine amidotransferase-like--PreATP-grasp domain--Glutathione synthetase ATP-binding domain-like-- 57889_49562_56112_ 57889_49562_56112_ E_4 4_2_2 4 A_7 B_6 E_663 --B_12 E_1627 --A_114 B_971 E_9319 -- endn_57889 endc_99999 NOTPDB CPL Cysteine-rich domain--C2 domain (Calcium/lipid-binding domain, CaLB)--Protein kinase-like (PK-like)-- 49265_49265_56496_ 49265_49265_56496_ E_36 3_2_1 36 A_23 B_135 E_1734 --A_23 B_135 E_1734 --A_2 B_3 E_372 -- 99999_49265 endc NOTPDB RPT Fibronectin type III--Fibronectin type III--Fibrinogen C-terminal domain-like-- 57903_57850_57903_ 57903_57850_57903_ E_2 4_2_2 2 A_56 B_38 E_1435 --A_19 B_52 E_3605 --A_56 B_38 E_1435 -- endn_99999 63748_99999 NOTPDB CPL FYVE/PHD zinc finger--RING finger domain, C3HC4--FYVE/PHD zinc finger-- 54695_47240_50965_ 54695_47240_50965_ E_2 3_2_1 2 B_6 E_2078 --A_126 B_660 E_337 --A_4 B_35 E_898 -- endn_54695 endc NOTPDB CPL POZ domain--Ferritin-like--Galactose oxidase, central domain-- 48726_49265_49265_ 48726_49265_49265_ E_333 9_4_5 333 A_14 B_78 E_4071 --A_23 B_135 E_1734 --A_23 B_135 E_1734 -- endn_48726_99999_49265 48726_endc_56112_99999_49265 INPDB RPT Immunoglobulin--Fibronectin type III--Fibronectin type III-- 57196_57467_47473_ 57196_57467_47473_ E_9 4_2_2 9 A_2 B_7 E_2358 --A_2 B_8 E_358 --A_51 B_190 E_2808 -- endn_99999 endc_57283 INPDB CPL EGF/Laminin--Ovomucoid/PCI-1 like inhibitors--EF-hand-- 50729_57863_48403_ 50729_57863_48403_ E_40 4_2_2 40 A_14 B_44 E_3057 --B_10 E_253 --A_4 B_168 E_2348 -- endn_99999 endc_99999 NOTPDB CPL PH domain-like--Pyk2-associated protein beta ARF-GAP domain--Ankyrin repeat-- 53822_82895_82895_ 53822_82895_82895_ E_2 3_1_2 2 A_49 B_1285 E_794 --E_618 --E_618 -- endn endc_99999 NOTPDB RPT Periplasmic binding protein-like I--TSP-1 type 1 repeat--TSP-1 type 1 repeat-- 51905_51395_54862_ 51905_51395_54862_ E_4 3_2_1 4 A_358 B_2910 E_1243 --A_111 B_849 E_252 --A_411 B_743 E_103 -- 46548_51971 endc NOTPDB CPL FAD/NAD(P)-binding domain--FMN-linked oxidoreductases--4Fe-4S ferredoxins-- 46548_51905_51395_ 46548_51905_51395_ E_4 5_3_2 4 A_125 B_477 E_67 --A_358 B_2910 E_1243 --A_111 B_849 E_252 -- endn_99999_54862 54862_99999 INPDB CPL alpha-helical ferredoxin--FAD/NAD(P)-binding domain--FMN-linked oxidoreductases-- 49854_49854_50242_ 49854_49854_50242_ E_4 3_2_1 4 B_1 E_636 --B_1 E_636 --A_2 B_2 E_148 -- endn_99999 endc NOTPDB RPT Spermadhesin, CUB domain--Spermadhesin, CUB domain--TIMP-like-- 57196_49899_49899_ 57196_49899_49899_ E_23 8_5_3 23 A_2 B_7 E_2358 --A_22 B_208 E_1314 --A_22 B_208 E_1314 -- 57196_endn_49899_57184_99999 57196_49899_endc NOTPDB RPT EGF/Laminin--Concanavalin A-like lectins/glucanases--Concanavalin A-like lectins/glucanases-- 57774_57667_57667_ 57774_57667_57667_ E_25 7_3_4 25 A_17 B_84 E_96 --A_23 B_24 E_4849 --A_23 B_24 E_4849 -- endn_57667_99999 57667_57774_endc_99999 NOTPDB RPT Microbial and mitochondrial ADK, insert "zinc finger" domain--C2H2 and C2HC zinc fingers--C2H2 and C2HC zinc fingers-- 52075_54427_46934_ 52075_54427_46934_ E_6 3_2_1 6 B_3 E_104 --A_11 B_446 E_248 --A_21 B_114 E_420 -- 54928_99999 endc NOTPDB CPL Outer arm dynein light chain 1--NTF2-like--UBA-like-- 57196_57196_69304_ 57196_57196_69304_ E_3 4_2_2 3 A_2 B_7 E_2358 --A_2 B_7 E_2358 --A_4 B_18 E_43 -- 57424_99999 57196_99999 NOTPDB RPT EGF/Laminin--EGF/Laminin--Tricorn protease N-terminal domain-- 57535_57535_57535_ 57535_57535_57535_ E_233 18_12_6 233 B_3 E_582 --B_3 E_582 --B_3 E_582 -- 57059_56436_endn_57184_53300_49854_50104_57535_57196_57302_48726_99999 57196_53300_endc_50370_99999_57535 INPDB RPT Complement control module/SCR domain--Complement control module/SCR domain--Complement control module/SCR domain-- 48065_50729_49562_ 48065_50729_49562_ E_4 4_2_2 4 A_3 B_7 E_597 --A_14 B_44 E_3057 --B_12 E_1627 -- endn_50044 endc_48350 NOTPDB CPL DBL homology domain (DH-domain)--PH domain-like--C2 domain (Calcium/lipid-binding domain, CaLB)-- 52833_52833_52833_ 52833_52833_52833_ E_138 9_4_5 138 A_220 B_2517 E_2068 --A_220 B_2517 E_2068 --A_220 B_2517 E_2068 -- endn_52833_46565_99999 51126_52833_endc_49265_99999 INPDB RPT Thioredoxin-like--Thioredoxin-like--Thioredoxin-like-- 57889_57889_49562_ 57889_57889_49562_ E_16 4_2_2 16 A_7 B_6 E_663 --A_7 B_6 E_663 --B_12 E_1627 -- endn_99999 56112_99999 NOTPDB RPT Cysteine-rich domain--Cysteine-rich domain--C2 domain (Calcium/lipid-binding domain, CaLB)-- 56219_56672_56672_ 56219_56672_56672_ E_6 6_3_3 6 A_14 B_311 E_899 --A_66 B_378 E_3164 --A_66 B_378 E_3164 -- endn_56672_99999 endc_53098_99999 NOTPDB RPT DNase I-like--DNA/RNA polymerases--DNA/RNA polymerases-- 53300_69179_57196_ 53300_69179_57196_ E_29 5_3_2 29 A_51 B_345 E_996 --A_2 B_11 E_172 --A_2 B_7 E_2358 -- endn_69179_99999 57196_99999 INPDB CPL vWA-like--Integrin domains--EGF/Laminin-- 49854_57424_57424_ 49854_57424_57424_ E_20 7_4_3 20 B_1 E_636 --E_497 --E_497 -- endn_57424_49854_99999 57424_49854_99999 NOTPDB RPT Spermadhesin, CUB domain--LDL receptor-like module--LDL receptor-like module-- 52540_53795_52047_ 52540_53795_52047_ E_2 3_2_1 2 A_2129 B_14320 E_12913 --A_421 B_3843 E_485 --A_9 B_93 E_2576 -- 47986_endn endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--PEP carboxykinase-like--RNI-like-- 81698_81698_81698_ 81698_81698_81698_ E_28 5_2_3 28 B_1 E_63 --B_1 E_63 --B_1 E_63 -- 81698_99999 81698_endc_99999 NOTPDB RPT FF domain--FF domain--FF domain-- 56496_49899_49899_ 56496_49899_49899_ E_16 5_3_2 16 A_2 B_3 E_372 --A_22 B_208 E_1314 --A_22 B_208 E_1314 -- 57196_endn_49899 endc_99999 NOTPDB RPT Fibrinogen C-terminal domain-like--Concanavalin A-like lectins/glucanases--Concanavalin A-like lectins/glucanases-- 47986_52540_52540_ 47986_52540_52540_ E_2 3_1_2 2 A_8 B_32 E_410 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn endc_99999 NOTPDB RPT DEATH domain--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 54534_54534_48452_ 54534_54534_48452_ E_16 5_3_2 16 A_32 B_599 E_266 --A_32 B_599 E_266 --A_146 B_1937 E_3442 -- endn_54534_99999 endc_99999 INPDB RPT FKBP-like--FKBP-like--TPR-like-- 56672_53098_53098_ 56672_53098_53098_ E_24 7_3_4 24 A_66 B_378 E_3164 --A_290 B_2494 E_2335 --A_290 B_2494 E_2335 -- endn_46785_99999 51569_endc_53098_99999 NOTPDB RPT DNA/RNA polymerases--Ribonuclease H-like--Ribonuclease H-like-- 57535_49854_57535_ 57535_49854_57535_ E_28 6_3_3 28 B_3 E_582 --B_1 E_636 --B_3 E_582 -- endn_49854_99999 endc_49854_57535 NOTPDB CPL Complement control module/SCR domain--Spermadhesin, CUB domain--Complement control module/SCR domain-- 50044_55550_50044_ 50044_55550_50044_ E_21 5_3_2 21 A_2 B_84 E_1671 --A_4 B_15 E_910 --A_2 B_84 E_1671 -- endn_57889_99999 endc_99999 NOTPDB CPL SH3-domain--SH2 domain--SH3-domain-- 54001_49758_49758_ 54001_49758_49758_ E_12 6_3_3 12 A_60 B_262 E_1838 --B_4 E_128 --B_4 E_128 -- endn_48452_99999 48452_endc_99999 NOTPDB RPT Cysteine proteinases--Calpain large subunit, middle domain (domain III)--Calpain large subunit, middle domain (domain III)-- 51045_51045_51735_ 51045_51045_51735_ E_11 3_1_2 11 B_5 E_413 --B_5 E_413 --A_993 B_8798 E_3827 -- endn endc_99999 NOTPDB RPT WW domain--WW domain--NAD(P)-binding Rossmann-fold domains-- 55856_56524_81296_ 55856_56524_81296_ E_10 3_2_1 10 A_5 B_20 E_198 --A_12 B_79 E_26 --A_40 B_404 E_1207 -- endn_99999 endc INPDB CPL Cytochrome b5--Sulfite oxidase, middle catalytic domain--E set domains-- 49265_49265_48726_ 49265_49265_48726_ E_67 7_4_3 67 A_23 B_135 E_1734 --A_23 B_135 E_1734 --A_14 B_78 E_4071 -- endn_48726_99999_49265 endc_99999_49265 NOTPDB RPT Fibronectin type III--Fibronectin type III--Immunoglobulin-- 49854_56436_56436_ 49854_56436_56436_ E_2 4_2_2 2 B_1 E_636 --A_2 B_62 E_1409 --A_2 B_62 E_1409 -- 56436_endn 49854_99999 NOTPDB RPT Spermadhesin, CUB domain--C-type lectin-like--C-type lectin-like-- 56524_81296_55856_ 56524_81296_55856_ E_4 4_2_2 4 A_12 B_79 E_26 --A_40 B_404 E_1207 --A_5 B_20 E_198 -- 63380_99999 63380_99999 NOTPDB CPL Sulfite oxidase, middle catalytic domain--E set domains--Cytochrome b5-- 57184_57196_49899_ 57184_57196_49899_ E_5 5_2_3 5 B_4 E_859 --A_2 B_7 E_2358 --A_22 B_208 E_1314 -- 57196_99999 57196_49899_endc NOTPDB CPL Growth factor receptor domain--EGF/Laminin--Concanavalin A-like lectins/glucanases-- 81995_82919_53300_ 81995_82919_53300_ E_41 5_3_2 41 A_1 B_2 E_111 --A_2 B_5 E_56 --A_51 B_345 E_996 -- 52540_endn_99999 endc_99999 INPDB CPL beta-sandwich domain of Sec23/24--Zn-finger domain of Sec23/24--vWA-like-- 47862_47862_47862_ 47862_47862_47862_ E_9 4_2_2 9 A_2 E_136 --A_2 E_136 --A_2 E_136 -- 47862_99999 47862_99999 NOTPDB RPT Saposin--Saposin--Saposin-- 57756_50630_56672_ 57756_50630_56672_ E_47 6_2_4 47 A_11 B_19 E_1238 --A_15 B_69 E_1046 --A_66 B_378 E_3164 -- endn_99999 56672_endc_99999_53098 NOTPDB CPL Retrovirus zinc finger-like domains--Acid proteases--DNA/RNA polymerases-- 57196_57196_49899_ 57196_57196_49899_ E_65 9_4_5 65 A_2 B_7 E_2358 --A_2 B_7 E_2358 --A_22 B_208 E_1314 -- 57196_endn_49899_99999 57196_49899_endc_57535_99999 NOTPDB RPT EGF/Laminin--EGF/Laminin--Concanavalin A-like lectins/glucanases-- 52540_48403_48403_ 52540_48403_48403_ E_4 4_2_2 4 A_2129 B_14320 E_12913 --A_4 B_168 E_2348 --A_4 B_168 E_2348 -- endn_99999 48403_99999 NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--Ankyrin repeat--Ankyrin repeat-- 47686_47686_57196_ 47686_47686_57196_ E_4 3_1_2 4 E_41 --E_41 --A_2 B_7 E_2358 -- endn 57196_57184 NOTPDB RPT Anaphylotoxins (complement system)--Anaphylotoxins (complement system)--EGF/Laminin-- 54511_57196_57196_ 54511_57196_57196_ E_4 6_3_3 4 B_3 E_22 --A_2 B_7 E_2358 --A_2 B_7 E_2358 -- 57196_48726_99999 57196_57610_57184 NOTPDB RPT GFP-like--EGF/Laminin--EGF/Laminin-- 82895_57362_82895_ 82895_57362_82895_ E_7 4_2_2 7 E_618 --A_1 B_1 E_226 --E_618 -- 99999_82895 endc_82895 NOTPDB CPL TSP-1 type 1 repeat--BPTI-like--TSP-1 type 1 repeat-- 47943_47353_57756_ 47943_47353_57756_ E_25 4_2_2 25 A_1 B_7 E_66 --A_3 B_6 E_153 --A_11 B_19 E_1238 -- endn_99999 endc_99999 NOTPDB CPL Retrovirus capsid protein, N-terminal core domain--Retrovirus capsid protein C-terminal domain--Retrovirus zinc finger-like domains-- 57424_57184_57196_ 57424_57184_57196_ E_4 4_2_2 4 E_497 --B_4 E_859 --A_2 B_7 E_2358 -- 57424_99999 63825_63829 NOTPDB CPL LDL receptor-like module--Growth factor receptor domain--EGF/Laminin-- 49899_49899_57196_ 49899_49899_57196_ E_22 9_4_5 22 A_22 B_208 E_1314 --A_22 B_208 E_1314 --A_2 B_7 E_2358 -- 57196_53383_endn_49785 57196_49899_57184_56496_99999 NOTPDB RPT Concanavalin A-like lectins/glucanases--Concanavalin A-like lectins/glucanases--EGF/Laminin-- 46934_46934_46934_ 46934_46934_46934_ E_10 5_2_3 10 A_21 B_114 E_420 --A_21 B_114 E_420 --A_21 B_114 E_420 -- 48452_99999 48452_endc_99999 NOTPDB RPT UBA-like--UBA-like--UBA-like-- 48065_50729_57903_ 48065_50729_57903_ E_22 4_2_2 22 A_3 B_7 E_597 --A_14 B_44 E_3057 --A_56 B_38 E_1435 -- endn_99999 50729_99999 NOTPDB CPL DBL homology domain (DH-domain)--PH domain-like--FYVE/PHD zinc finger-- 57889_57889_57903_ 57889_57889_57903_ E_13 7_4_3 13 A_7 B_6 E_663 --A_7 B_6 E_663 --A_56 B_38 E_1435 -- endn_57903_57889_99999 57903_57889_99999 NOTPDB RPT Cysteine-rich domain--Cysteine-rich domain--FYVE/PHD zinc finger-- 56112_82615_82615_ 56112_82615_82615_ E_2 3_2_1 2 A_114 B_971 E_9319 --A_1 B_2 E_41 --A_1 B_2 E_41 -- endn_99999 endc NOTPDB RPT Protein kinase-like (PK-like)--Polo domain--Polo domain-- 69065_69065_54768_ 69065_69065_54768_ E_4 3_2_1 4 B_129 E_71 --B_129 E_71 --A_18 B_198 E_397 -- endn_99999 endc NOTPDB RPT RNase III endonuclease catalytic domain--RNase III endonuclease catalytic domain--dsRNA-binding domain-like-- 47769_47769_47769_ 47769_47769_47769_ E_39 4_2_2 39 A_6 B_20 E_633 --A_6 B_20 E_633 --A_6 B_20 E_633 -- endn_99999 endc_99999 NOTPDB RPT SAM/Pointed domain--SAM/Pointed domain--SAM/Pointed domain-- 51658_50729_52047_ 51658_50729_52047_ E_2 3_1_2 2 A_102 B_575 E_65 --A_14 B_44 E_3057 --A_9 B_93 E_2576 -- endn 52058_endc NOTPDB CPL Xylose isomerase-like--PH domain-like--RNI-like-- 48452_48452_46565_ 48452_48452_46565_ E_2 3_2_1 2 A_146 B_1937 E_3442 --A_146 B_1937 E_3442 --A_12 B_326 E_827 -- endn_99999 endc NOTPDB RPT TPR-like--TPR-like--Chaperone J-domain-- 49562_49562_53300_ 49562_49562_53300_ E_44 4_2_2 44 B_12 E_1627 --B_12 E_1627 --A_51 B_345 E_996 -- endn_99999 endc_99999 NOTPDB RPT C2 domain (Calcium/lipid-binding domain, CaLB)--C2 domain (Calcium/lipid-binding domain, CaLB)--vWA-like-- 55486_57440_57440_ 55486_57440_57440_ E_12 4_2_2 12 A_64 B_735 E_1617 --A_6 B_6 E_228 --A_6 B_6 E_228 -- endn_47090 57440_99999 INPDB RPT Metalloproteases ("zincins"), catalytic domain--Kringle-like--Kringle-like-- 56672_53098_51569_ 56672_53098_51569_ E_9 4_1_3 9 A_66 B_378 E_3164 --A_290 B_2494 E_2335 --A_136 B_1089 E_356 -- endn endc_99999_53098 NOTPDB CPL DNA/RNA polymerases--Ribonuclease H-like--Aldolase-- 56436_56436_56436_ 56436_56436_56436_ E_40 7_4_3 40 A_2 B_62 E_1409 --A_2 B_62 E_1409 --A_2 B_62 E_1409 -- 57440_endn_56436_99999 56436_endc_99999 NOTPDB RPT C-type lectin-like--C-type lectin-like--C-type lectin-like-- 47986_47986_52540_ 47986_47986_52540_ E_4 3_1_2 4 A_8 B_32 E_410 --A_8 B_32 E_410 --A_2129 B_14320 E_12913 -- endn 53795_99999 NOTPDB RPT DEATH domain--DEATH domain--P-loop containing nucleotide triphosphate hydrolases-- 52540_48403_52540_ 52540_48403_52540_ E_4 5_3_2 4 A_2129 B_14320 E_12913 --A_4 B_168 E_2348 --A_2129 B_14320 E_12913 -- endn_46458_82708 52540_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Ankyrin repeat--P-loop containing nucleotide triphosphate hydrolases-- 49611_53098_56672_ 49611_53098_56672_ E_13 5_3_2 13 A_18 B_143 E_192 --A_290 B_2494 E_2335 --A_66 B_378 E_3164 -- endn_57756_99999 endc_99999 NOTPDB CPL Viral coat and capsid proteins--Ribonuclease H-like--DNA/RNA polymerases-- 53300_57196_57196_ 53300_57196_57196_ E_11 6_3_3 11 A_51 B_345 E_996 --A_2 B_7 E_2358 --A_2 B_7 E_2358 -- endn_53300_49265 57196_53300_99999 NOTPDB RPT vWA-like--EGF/Laminin--EGF/Laminin-- 47473_51695_49562_ 47473_51695_49562_ E_65 7_4_3 65 A_51 B_190 E_2808 --A_5 B_143 E_312 --B_12 E_1627 -- endn_50729_47473_99999 endc_51695_99999 INPDB CPL EF-hand--Phosphatidylinositol-specific phospholipase C (PI-PLC)--C2 domain (Calcium/lipid-binding domain, CaLB)-- 52490_55307_52490_ 52490_55307_52490_ E_3 3_1_2 3 A_37 B_111 E_301 --A_28 B_99 E_286 --A_37 B_111 E_301 -- endn 52799_55307 NOTPDB CPL Tubulin, GTPase domain--Tubulin, C-terminal domain--Tubulin, GTPase domain-- 47668_47473_55550_ 47668_47473_55550_ E_20 4_2_2 20 E_24 --A_51 B_190 E_2808 --A_4 B_15 E_910 -- endn_99999 99999_57850 INPDB CPL N-terminal domain of cbl (N-cbl)--EF-hand--SH2 domain-- 57903_57889_57889_ 57903_57889_57889_ E_15 6_3_3 15 A_56 B_38 E_1435 --A_7 B_6 E_663 --A_7 B_6 E_663 -- endn_57889_99999 57903_57889_99999 NOTPDB RPT FYVE/PHD zinc finger--Cysteine-rich domain--Cysteine-rich domain-- 49329_49329_49329_ 49329_49329_49329_ E_5 4_2_2 5 A_4 B_72 E_102 --A_4 B_72 E_102 --A_4 B_72 E_102 -- endn_99999 endc_49329 NOTPDB RPT Cu,Zn superoxide dismutase-like--Cu,Zn superoxide dismutase-like--Cu,Zn superoxide dismutase-like-- 48371_52540_52540_ 48371_52540_52540_ E_3 5_2_3 3 A_73 B_255 E_3951 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn_48371 endc_99999_49265 NOTPDB RPT ARM repeat--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 49899_57196_57196_ 49899_57196_57196_ E_41 10_5_5 41 A_22 B_208 E_1314 --A_2 B_7 E_2358 --A_2 B_7 E_2358 -- 57196_endn_48726_49899_99999 57196_49899_57184_57501_99999 NOTPDB RPT Concanavalin A-like lectins/glucanases--EGF/Laminin--EGF/Laminin-- 54928_56601_54928_ 54928_56601_54928_ E_3 3_2_1 3 A_6 B_60 E_3471 --A_15 B_1220 E_127 --A_6 B_60 E_3471 -- 54928_endn endc NOTPDB CPL RNA-binding domain, RBD--beta-Lactamase/D-ala carboxypeptidase--RNA-binding domain, RBD-- 64268_50044_50044_ 64268_50044_50044_ E_15 4_2_2 15 B_5 E_392 --A_2 B_84 E_1671 --A_2 B_84 E_1671 -- endn_50044 endc_99999 NOTPDB RPT PX domain--SH3-domain--SH3-domain-- 57889_57903_57903_ 57889_57903_57903_ E_4 5_2_3 4 A_7 B_6 E_663 --A_56 B_38 E_1435 --A_56 B_38 E_1435 -- endn_57889 57903_57889_99999 NOTPDB RPT Cysteine-rich domain--FYVE/PHD zinc finger--FYVE/PHD zinc finger-- 57667_57667_48726_ 57667_57667_48726_ E_14 5_3_2 14 A_23 B_24 E_4849 --A_23 B_24 E_4849 --A_14 B_78 E_4071 -- endn_57667_99999 57667_endc NOTPDB RPT C2H2 and C2HC zinc fingers--C2H2 and C2HC zinc fingers--Immunoglobulin-- 57196_57196_56436_ 57196_57196_56436_ E_9 6_3_3 9 A_2 B_7 E_2358 --A_2 B_7 E_2358 --A_2 B_62 E_1409 -- endn_57184_99999 endc_99999_57535 NOTPDB RPT EGF/Laminin--EGF/Laminin--C-type lectin-like-- 82895_82895_57567_ 82895_82895_57567_ E_5 6_3_3 5 E_618 --E_618 --E_254 -- 57424_57567_82895 endc_57283_82895 NOTPDB RPT TSP-1 type 1 repeat--TSP-1 type 1 repeat--Serine proterase inhibitors-- 50729_50729_50729_ 50729_50729_50729_ E_5 4_2_2 5 A_14 B_44 E_3057 --A_14 B_44 E_3057 --A_14 B_44 E_3057 -- 50729_99999 50729_99999 NOTPDB RPT PH domain-like--PH domain-like--PH domain-like-- 47769_47769_52200_ 47769_47769_52200_ E_12 4_2_2 12 A_6 B_20 E_633 --A_6 B_20 E_633 --A_2 B_41 E_302 -- 48371_99999 endc_99999 NOTPDB RPT SAM/Pointed domain--SAM/Pointed domain--Toll/Interleukin receptor TIR domain-- 57567_57567_57567_ 57567_57567_57567_ E_23 9_4_5 23 E_254 --E_254 --E_254 -- 57610_endn_99999_57567 57610_49344_endc_99999_57567 NOTPDB RPT Serine proterase inhibitors--Serine proterase inhibitors--Serine proterase inhibitors-- 57903_57716_57716_ 57903_57716_57716_ E_5 5_2_3 5 A_56 B_38 E_1435 --A_72 B_426 E_2067 --A_72 B_426 E_2067 -- endn_57716 57716_50156_endc NOTPDB RPT FYVE/PHD zinc finger--Glucocorticoid receptor-like (DNA-binding domain)--Glucocorticoid receptor-like (DNA-binding domain)-- 56529_53720_53213_ 56529_53720_53213_ E_2 3_2_1 2 A_28 B_204 E_72 --A_55 B_835 E_336 --A_21 B_45 E_9 -- endn_56529 endc NOTPDB CPL FAH--ALDH-like--LigB subunit of an aromatic-ring-opening dioxygenase LigAB-- 54511_57184_57610_ 54511_57184_57610_ E_9 5_3_2 9 B_3 E_22 --B_4 E_859 --A_1 B_1 E_118 -- 57196_57184_99999 50969_57610 NOTPDB CPL GFP-like--Growth factor receptor domain--Thyroglobulin type-1 domain-- 57535_57535_50494_ 57535_57535_50494_ E_24 5_3_2 24 B_3 E_582 --B_3 E_582 --A_19 B_482 E_1600 -- 57424_49854_99999 endc_99999 INPDB RPT Complement control module/SCR domain--Complement control module/SCR domain--Trypsin-like serine proteases-- 56672_56672_53098_ 56672_56672_53098_ E_7 5_3_2 7 A_66 B_378 E_3164 --A_66 B_378 E_3164 --A_290 B_2494 E_2335 -- 50630_endn_56219 endc_99999 NOTPDB RPT DNA/RNA polymerases--DNA/RNA polymerases--Ribonuclease H-like-- 47220_47220_47220_ 47220_47220_47220_ E_22 5_2_3 22 A_6 B_4 E_147 --A_6 B_4 E_147 --A_6 B_4 E_147 -- endn_99999 47220_endc_99999 NOTPDB RPT alpha-catenin/vinculin--alpha-catenin/vinculin--alpha-catenin/vinculin-- 53300_57196_53300_ 53300_57196_53300_ E_10 4_2_2 10 A_51 B_345 E_996 --A_2 B_7 E_2358 --A_51 B_345 E_996 -- endn_63748 53300_endc NOTPDB CPL vWA-like--EGF/Laminin--vWA-like-- 54928_54928_57756_ 54928_54928_57756_ E_8 4_2_2 8 A_6 B_60 E_3471 --A_6 B_60 E_3471 --A_11 B_19 E_1238 -- endn_99999 endc_99999 NOTPDB RPT RNA-binding domain, RBD--RNA-binding domain, RBD--Retrovirus zinc finger-like domains-- 48403_52113_52113_ 48403_52113_52113_ E_2 3_2_1 2 A_4 B_168 E_2348 --A_1 B_117 E_366 --A_1 B_117 E_366 -- endn_99999 endc NOTPDB RPT Ankyrin repeat--BRCT domain--BRCT domain-- 47370_47370_47370_ 47370_47370_47370_ E_19 6_3_3 19 A_3 B_4 E_452 --A_3 B_4 E_452 --A_3 B_4 E_452 -- endn_47370_99999 endc_99999_47370 NOTPDB RPT Bromodomain--Bromodomain--Bromodomain-- 48403_50985_54695_ 48403_50985_54695_ E_4 3_1_2 4 A_4 B_168 E_2348 --B_15 E_285 --B_6 E_2078 -- endn 54695_99999 NOTPDB CPL Ankyrin repeat--RCC1/BLIP-II--POZ domain-- 82895_57567_57283_ 82895_57567_57283_ E_6 6_4_2 6 E_618 --E_254 --E_147 -- 57283_57567_99999_82895 82895_99999 NOTPDB CPL TSP-1 type 1 repeat--Serine proterase inhibitors--PMP inhibitors-- 57850_48695_57845_ 57850_48695_57845_ E_2 4_2_2 2 A_19 B_52 E_3605 --A_18 B_378 E_163 --E_367 -- endn_99999 endc_99999 NOTPDB CPL RING finger domain, C3HC4--Multiheme cytochromes--B-box zinc-binding domain-- 50911_50911_50911_ 50911_50911_50911_ E_11 4_2_2 11 E_86 --E_86 --E_86 -- 50911_99999 99999_50911 NOTPDB RPT Mannose 6-phosphate receptor domain--Mannose 6-phosphate receptor domain--Mannose 6-phosphate receptor domain-- 48366_47473_57889_ 48366_47473_57889_ E_22 3_1_2 22 E_271 --A_51 B_190 E_2808 --A_7 B_6 E_663 -- endn endc_99999 NOTPDB CPL Ras GEF--EF-hand--Cysteine-rich domain-- 54160_52540_52540_ 54160_52540_52540_ E_34 4_2_2 34 A_7 B_11 E_374 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- 54160_99999 endc_99999 NOTPDB RPT Chromo domain-like--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 57667_48726_57667_ 57667_48726_57667_ E_27 6_3_3 27 A_23 B_24 E_4849 --A_14 B_78 E_4071 --A_23 B_24 E_4849 -- endn_57667_99999 57667_endc_99999 NOTPDB CPL C2H2 and C2HC zinc fingers--Immunoglobulin--C2H2 and C2HC zinc fingers-- 50729_53335_56235_ 50729_53335_56235_ E_2 3_1_2 2 A_14 B_44 E_3057 --A_733 B_3918 E_2070 --A_157 B_611 E_596 -- endn 56235_endc NOTPDB CPL PH domain-like--S-adenosyl-L-methionine-dependent methyltransferases--N-terminal nucleophile aminohydrolases (Ntn hydrolases)-- 49785_49899_49899_ 49785_49899_49899_ E_19 5_3_2 19 A_10 B_366 E_724 --A_22 B_208 E_1314 --A_22 B_208 E_1314 -- endn_49785_99999 57196_56496 NOTPDB RPT Galactose-binding domain-like--Concanavalin A-like lectins/glucanases--Concanavalin A-like lectins/glucanases-- 57196_57196_57501_ 57196_57196_57501_ E_3 3_2_1 3 A_2 B_7 E_2358 --A_2 B_7 E_2358 --A_1 B_17 E_479 -- 57196_49899 endc NOTPDB RPT EGF/Laminin--EGF/Laminin--Cystine-knot cytokines-- 53300_69318_69179_ 53300_69318_69179_ E_41 7_3_4 41 A_51 B_345 E_996 --A_6 B_79 E_181 --A_2 B_11 E_172 -- endn_69179_99999 69179_endc_53300_99999 NOTPDB CPL vWA-like--Integrin alpha N-terminal domain--Integrin domains-- 49265_56112_48726_ 49265_56112_48726_ E_16 4_2_2 16 A_23 B_135 E_1734 --A_114 B_971 E_9319 --A_14 B_78 E_4071 -- 48726_49265 48726_endc NOTPDB CPL Fibronectin type III--Protein kinase-like (PK-like)--Immunoglobulin-- 48726_82895_82895_ 48726_82895_82895_ E_21 6_3_3 21 A_14 B_78 E_4071 --E_618 --E_618 -- endn_48726_99999 endc_99999_82895 NOTPDB RPT Immunoglobulin--TSP-1 type 1 repeat--TSP-1 type 1 repeat-- 82895_57440_57440_ 82895_57440_57440_ E_2 4_2_2 2 E_618 --A_6 B_6 E_228 --A_6 B_6 E_228 -- endn_99999 57440_50494 NOTPDB RPT TSP-1 type 1 repeat--Kringle-like--Kringle-like-- 69179_53300_69179_ 69179_53300_69179_ E_10 4_2_2 10 A_2 B_11 E_172 --A_51 B_345 E_996 --A_2 B_11 E_172 -- endn_99999 57196_99999 INPDB CPL Integrin domains--vWA-like--Integrin domains-- 46966_46966_46966_ 46966_46966_46966_ E_210 14_7_7 210 A_7 B_30 E_584 --A_7 B_30 E_584 --A_7 B_30 E_584 -- 52087_endn_46966_50729_47576_47473_99999 51045_46966_75399_50044_47473_endc_99999 INPDB RPT Spectrin repeat--Spectrin repeat--Spectrin repeat-- 54001_57667_57667_ 54001_57667_57667_ E_3 4_2_2 3 A_60 B_262 E_1838 --A_23 B_24 E_4849 --A_23 B_24 E_4849 -- 57667_99999 57667_endc NOTPDB RPT Cysteine proteinases--C2H2 and C2HC zinc fingers--C2H2 and C2HC zinc fingers-- 53300_53300_56436_ 53300_53300_56436_ E_5 4_2_2 5 A_51 B_345 E_996 --A_51 B_345 E_996 --A_2 B_62 E_1409 -- endn_99999 endc_99999 NOTPDB RPT vWA-like--vWA-like--C-type lectin-like-- 52540_52047_52540_ 52540_52047_52540_ E_13 6_5_1 13 A_2129 B_14320 E_12913 --A_9 B_93 E_2576 --A_2129 B_14320 E_12913 -- 52540_47986_endn_52200_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--RNI-like--P-loop containing nucleotide triphosphate hydrolases-- 57924_57924_57924_ 57924_57924_57924_ E_24 6_2_4 24 B_1 E_142 --B_1 E_142 --B_1 E_142 -- endn_99999 55770_52540_99999_57850 NOTPDB RPT Inhibitor of apoptosis (IAP) repeat--Inhibitor of apoptosis (IAP) repeat--Inhibitor of apoptosis (IAP) repeat-- 51206_51206_51206_ 51206_51206_51206_ E_2 4_2_2 2 A_2 B_447 E_467 --A_2 B_447 E_467 --A_2 B_447 E_467 -- 51206_99999 51206_99999 NOTPDB RPT cAMP-binding domain-like--cAMP-binding domain-like--cAMP-binding domain-like-- 47473_47576_47576_ 47473_47576_47576_ E_29 5_2_3 29 A_51 B_190 E_2808 --B_8 E_704 --B_8 E_704 -- endn_99999 47576_endc_99999 NOTPDB RPT EF-hand--Calponin-homology domain, CH-domain--Calponin-homology domain, CH-domain-- 56512_52218_63380_ 56512_52218_63380_ E_8 4_2_2 8 B_12 E_33 --A_110 B_706 E_157 --A_34 B_499 E_327 -- endn_99999 endc_99999 NOTPDB CPL Nitric oxide (NO) synthase oxygenase domain--Flavoproteins--Riboflavin synthase domain-like-- 57850_49599_49599_ 57850_49599_49599_ E_12 5_2_3 12 A_19 B_52 E_3605 --A_1 E_685 --A_1 E_685 -- endn_99999 49599_endc_99999 NOTPDB RPT RING finger domain, C3HC4--TRAF domain-like--TRAF domain-like-- 49265_57196_57196_ 49265_57196_57196_ E_5 3_1_2 5 A_23 B_135 E_1734 --A_2 B_7 E_2358 --A_2 B_7 E_2358 -- endn 57196_99999 NOTPDB RPT Fibronectin type III--EGF/Laminin--EGF/Laminin-- 53300_57184_57196_ 53300_57184_57196_ E_6 4_2_2 6 A_51 B_345 E_996 --B_4 E_859 --A_2 B_7 E_2358 -- endn_99999 57196_99999 NOTPDB CPL vWA-like--Growth factor receptor domain--EGF/Laminin-- 50494_49854_49854_ 50494_49854_49854_ E_4 4_1_3 4 A_19 B_482 E_1600 --B_1 E_636 --B_1 E_636 -- endn 50494_endc_99999 NOTPDB RPT Trypsin-like serine proteases--Spermadhesin, CUB domain--Spermadhesin, CUB domain-- 50044_50044_55550_ 50044_50044_55550_ E_16 4_3_1 16 A_2 B_84 E_1671 --A_2 B_84 E_1671 --A_4 B_15 E_910 -- endn_50044_99999 endc NOTPDB RPT SH3-domain--SH3-domain--SH2 domain-- 50729_47113_48065_ 50729_47113_48065_ E_2 3_1_2 2 A_14 B_44 E_3057 --A_42 B_30 E_1066 --A_3 B_7 E_597 -- endn 50729_99999 NOTPDB CPL PH domain-like--Histone-fold--DBL homology domain (DH-domain)-- 52540_53795_54862_ 52540_53795_54862_ E_3 3_2_1 3 A_2129 B_14320 E_12913 --A_421 B_3843 E_485 --A_411 B_743 E_103 -- 46548_54862 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--PEP carboxykinase-like--4Fe-4S ferredoxins-- 63380_56524_81296_ 63380_56524_81296_ E_2 3_1_2 2 A_34 B_499 E_327 --A_12 B_79 E_26 --A_40 B_404 E_1207 -- endn 55856_99999 NOTPDB CPL Riboflavin synthase domain-like--Sulfite oxidase, middle catalytic domain--E set domains-- 57603_57440_57440_ 57603_57440_57440_ E_11 4_2_2 11 B_1 E_56 --A_6 B_6 E_228 --A_6 B_6 E_228 -- 57603_99999 57603_50494 INPDB RPT Fibronectin type I module--Kringle-like--Kringle-like-- 52540_52058_52540_ 52540_52058_52540_ E_4 3_2_1 4 A_2129 B_14320 E_12913 --A_6 B_143 E_2568 --A_2129 B_14320 E_12913 -- 46589_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--L domain-like--P-loop containing nucleotide triphosphate hydrolases-- 54160_54160_52540_ 54160_54160_52540_ E_33 4_2_2 33 A_7 B_11 E_374 --A_7 B_11 E_374 --A_2129 B_14320 E_12913 -- 57903_99999 52540_99999 NOTPDB RPT Chromo domain-like--Chromo domain-like--P-loop containing nucleotide triphosphate hydrolases-- 81296_81296_49503_ 81296_81296_49503_ E_2 3_2_1 2 A_40 B_404 E_1207 --A_40 B_404 E_1207 --A_81 B_368 E_450 -- 81296_99999 endc NOTPDB RPT E set domains--E set domains--Cupredoxins-- 57196_63829_57196_ 57196_63829_57196_ E_4 5_3_2 4 A_2 B_7 E_2358 --A_5 B_40 E_110 --A_2 B_7 E_2358 -- 57196_50952_57184 57424_99999 NOTPDB CPL EGF/Laminin--Diisopropylfluorophosphatase (phosphotriesterase, DFP)--EGF/Laminin-- 57610_50969_57196_ 57610_50969_57196_ E_5 3_2_1 5 A_1 B_1 E_118 --A_24 B_218 E_336 --A_2 B_7 E_2358 -- 57610_57184 endc NOTPDB CPL Thyroglobulin type-1 domain--YVTN repeat-like/Quinoprotein amine dehydrogenase--EGF/Laminin-- 50630_53098_56672_ 50630_53098_56672_ E_9 4_3_1 9 A_15 B_69 E_1046 --A_290 B_2494 E_2335 --A_66 B_378 E_3164 -- endn_57756_99999 endc NOTPDB CPL Acid proteases--Ribonuclease H-like--DNA/RNA polymerases-- 49854_57424_49854_ 49854_57424_49854_ E_6 4_2_2 6 B_1 E_636 --E_497 --B_1 E_636 -- endn_99999 57424_99999 NOTPDB CPL Spermadhesin, CUB domain--LDL receptor-like module--Spermadhesin, CUB domain-- 48050_48056_81296_ 48050_48056_81296_ E_20 4_2_2 20 B_3 E_31 --A_3 B_19 E_96 --A_40 B_404 E_1207 -- endn_99999 endc_99999 INPDB CPL Hemocyanin, N-terminal domain--Di-copper centre-containing domain--E set domains-- 55550_50044_55550_ 55550_50044_55550_ E_8 4_2_2 8 A_4 B_15 E_910 --A_2 B_84 E_1671 --A_4 B_15 E_910 -- endn_99999 50729_99999 NOTPDB CPL SH2 domain--SH3-domain--SH2 domain-- 48371_48371_48371_ 48371_48371_48371_ E_19 4_2_2 19 A_73 B_255 E_3951 --A_73 B_255 E_3951 --A_73 B_255 E_3951 -- 46626_endn endc_99999 INPDB RPT ARM repeat--ARM repeat--ARM repeat-- 55550_48403_55550_ 55550_48403_55550_ E_3 3_1_2 3 A_4 B_15 E_910 --A_4 B_168 E_2348 --A_4 B_15 E_910 -- endn 55550_99999 NOTPDB CPL SH2 domain--Ankyrin repeat--SH2 domain-- 57850_57889_57889_ 57850_57889_57889_ E_3 5_3_2 3 A_19 B_52 E_3605 --A_7 B_6 E_663 --A_7 B_6 E_663 -- endn_57889_99999 57889_99999 NOTPDB RPT RING finger domain, C3HC4--Cysteine-rich domain--Cysteine-rich domain-- 46934_53254_50044_ 46934_53254_50044_ E_3 3_1_2 3 A_21 B_114 E_420 --A_18 B_402 E_440 --A_2 B_84 E_1671 -- endn 53254_99999 NOTPDB CPL UBA-like--Phosphoglycerate mutase-like--SH3-domain-- 48726_48726_49899_ 48726_48726_49899_ E_5 4_2_2 5 A_14 B_78 E_4071 --A_14 B_78 E_4071 --A_22 B_208 E_1314 -- 48726_99999 57196_endc NOTPDB RPT Immunoglobulin--Immunoglobulin--Concanavalin A-like lectins/glucanases-- 57603_57603_57603_ 57603_57603_57603_ E_12 5_3_2 12 B_1 E_56 --B_1 E_56 --B_1 E_56 -- 57603_49265_99999 57603_99999 NOTPDB RPT Fibronectin type I module--Fibronectin type I module--Fibronectin type I module-- 52047_48726_48726_ 52047_48726_48726_ E_22 4_2_2 22 A_9 B_93 E_2576 --A_14 B_78 E_4071 --A_14 B_78 E_4071 -- endn_99999 48726_99999 NOTPDB RPT RNI-like--Immunoglobulin--Immunoglobulin-- 57567_57283_82895_ 57567_57283_82895_ E_7 5_2_3 7 E_254 --E_147 --E_618 -- 57567_82895 endc_57567_82895 NOTPDB CPL Serine proterase inhibitors--PMP inhibitors--TSP-1 type 1 repeat-- 48508_57716_48508_ 48508_57716_48508_ E_11 5_2_3 11 A_1 B_10 E_1172 --A_72 B_426 E_2067 --A_1 B_10 E_1172 -- 57716_99999 57716_endc_99999 NOTPDB CPL Nuclear receptor ligand-binding domain--Glucocorticoid receptor-like (DNA-binding domain)--Nuclear receptor ligand-binding domain-- 50729_50044_55550_ 50729_50044_55550_ E_10 3_1_2 10 A_14 B_44 E_3057 --A_2 B_84 E_1671 --A_4 B_15 E_910 -- endn endc_56112 NOTPDB CPL PH domain-like--SH3-domain--SH2 domain-- 53098_54928_54928_ 53098_54928_54928_ E_5 4_2_2 5 A_290 B_2494 E_2335 --A_6 B_60 E_3471 --A_6 B_60 E_3471 -- endn_99999 54928_99999 NOTPDB RPT Ribonuclease H-like--RNA-binding domain, RBD--RNA-binding domain, RBD-- 48726_49265_48726_ 48726_49265_48726_ E_47 10_6_4 47 A_14 B_78 E_4071 --A_23 B_135 E_1734 --A_14 B_78 E_4071 -- 57196_endn_48726_57184_99999_49265 48726_endc_99999_49265 NOTPDB CPL Immunoglobulin--Fibronectin type III--Immunoglobulin-- 57716_57716_46689_ 57716_57716_46689_ E_90 7_5_2 90 A_72 B_426 E_2067 --A_72 B_426 E_2067 --A_246 B_4125 E_4002 -- endn_57716_48695_57850_99999 endc_99999 NOTPDB RPT Glucocorticoid receptor-like (DNA-binding domain)--Glucocorticoid receptor-like (DNA-binding domain)--Homeodomain-like-- 49785_57535_57586_ 49785_57535_57586_ E_3 3_1_2 3 A_10 B_366 E_724 --B_3 E_582 --A_15 B_23 E_359 -- endn endc_49265 NOTPDB CPL Galactose-binding domain-like--Complement control module/SCR domain--TNF receptor-like-- 47031_50729_50729_ 47031_50729_50729_ E_6 3_2_1 6 B_13 E_440 --A_14 B_44 E_3057 --A_14 B_44 E_3057 -- 54236_99999 endc NOTPDB RPT Second domain of FERM--PH domain-like--PH domain-like-- 57184_57196_57184_ 57184_57196_57184_ E_5 7_4_3 5 B_4 E_859 --A_2 B_7 E_2358 --B_4 E_859 -- 57196_endn_57184_99999 57196_endc_99999 NOTPDB CPL Growth factor receptor domain--EGF/Laminin--Growth factor receptor domain-- 56176_55447_54665_ 56176_55447_54665_ E_42 5_3_2 42 A_43 B_454 E_248 --A_9 B_61 E_46 --A_21 B_98 E_68 -- endn_47741_99999 56003_endc INPDB CPL FAD-binding domain--CO dehydrogenase flavoprotein C-terminal domain-like--CO dehydrogenase molybdoprotein N-domain-like-- 47802_81585_81301_ 47802_81585_81301_ E_26 4_3_1 26 A_30 B_54 E_72 --A_3 B_9 E_30 --A_169 B_325 E_254 -- 52113_endn_99999 endc INPDB CPL DNA polymerase beta, N-terminal domain-like--DNA polymerase beta-like, second domain--Nucleotidyltransferase-- 57850_57716_57716_ 57850_57716_57716_ E_5 5_2_3 5 A_19 B_52 E_3605 --A_72 B_426 E_2067 --A_72 B_426 E_2067 -- endn_57716 57716_46689_99999 NOTPDB RPT RING finger domain, C3HC4--Glucocorticoid receptor-like (DNA-binding domain)--Glucocorticoid receptor-like (DNA-binding domain)-- 50729_50729_49562_ 50729_50729_49562_ E_5 5_2_3 5 A_14 B_44 E_3057 --A_14 B_44 E_3057 --B_12 E_1627 -- endn_99999 endc_99999_48350 NOTPDB RPT PH domain-like--PH domain-like--C2 domain (Calcium/lipid-binding domain, CaLB)-- 54236_47031_50729_ 54236_47031_50729_ E_224 9_3_6 224 A_18 B_81 E_1815 --B_13 E_440 --A_14 B_44 E_3057 -- endn_54236_99999 50729_50156_48065_endc_57850_99999 INPDB CPL Ubiquitin-like--Second domain of FERM--PH domain-like-- 56112_48403_53795_ 56112_48403_53795_ E_5 3_1_2 5 A_114 B_971 E_9319 --A_4 B_168 E_2348 --A_421 B_3843 E_485 -- endn 52540_99999 NOTPDB CPL Protein kinase-like (PK-like)--Ankyrin repeat--PEP carboxykinase-like-- 51445_51445_51445_ 51445_51445_51445_ E_6 4_2_2 6 A_89 B_1646 E_1474 --A_89 B_1646 E_1474 --A_89 B_1646 E_1474 -- endn_51445 endc_51445 NOTPDB RPT (Trans)glycosidases--(Trans)glycosidases--(Trans)glycosidases-- 57196_57196_63825_ 57196_57196_63825_ E_55 6_2_4 55 A_2 B_7 E_2358 --A_2 B_7 E_2358 --A_7 B_35 E_205 -- 57424_57184 57196_63825_endc_99999 INPDB RPT EGF/Laminin--EGF/Laminin--Low density lipoprotein (LDL) receptor YWTD domain-- 57196_57196_57184_ 57196_57196_57184_ E_88 10_6_4 88 A_2 B_7 E_2358 --A_2 B_7 E_2358 --B_4 E_859 -- 57196_endn_49899_54511_57184_99999 57196_57184_endc_99999 NOTPDB RPT EGF/Laminin--EGF/Laminin--Growth factor receptor domain-- 57467_47473_48726_ 57467_47473_48726_ E_7 5_3_2 7 A_2 B_8 E_358 --A_51 B_190 E_2808 --A_14 B_78 E_4071 -- endn_48726_99999 48726_endc NOTPDB CPL Ovomucoid/PCI-1 like inhibitors--EF-hand--Immunoglobulin-- 51735_51735_53474_ 51735_51735_53474_ E_5 3_2_1 5 A_993 B_8798 E_3827 --A_993 B_8798 E_3827 --A_141 B_2949 E_2909 -- 50129_99999 endc NOTPDB RPT NAD(P)-binding Rossmann-fold domains--NAD(P)-binding Rossmann-fold domains--alpha/beta-Hydrolases-- 57440_57440_57440_ 57440_57440_57440_ E_38 11_6_5 38 A_6 B_6 E_228 --A_6 B_6 E_228 --A_6 B_6 E_228 -- endn_57440_57414_99999_82895_55486 57440_50923_50494_endc_99999 INPDB RPT Kringle-like--Kringle-like--Kringle-like-- 56436_57424_49854_ 56436_57424_49854_ E_3 4_2_2 3 A_2 B_62 E_1409 --E_497 --B_1 E_636 -- endn_99999 49854_99999 NOTPDB CPL C-type lectin-like--LDL receptor-like module--Spermadhesin, CUB domain-- 47986_52540_52047_ 47986_52540_52047_ E_3 3_1_2 3 A_8 B_32 E_410 --A_2129 B_14320 E_12913 --A_9 B_93 E_2576 -- endn 52540_endc NOTPDB CPL DEATH domain--P-loop containing nucleotide triphosphate hydrolases--RNI-like-- 48092_47655_49417_ 48092_47655_49417_ E_29 3_1_2 29 A_1 B_1 E_33 --A_3 B_5 E_84 --A_10 B_39 E_458 -- endn endc_55550 NOTPDB CPL Transcription factor STAT-4 N-domain--STAT--p53-like transcription factors-- 82895_57567_82895_ 82895_57567_82895_ E_6 7_4_3 6 E_618 --E_254 --E_618 -- 57424_endn_82895_57567 57603_57567_82895 NOTPDB CPL TSP-1 type 1 repeat--Serine proterase inhibitors--TSP-1 type 1 repeat-- 52540_47473_52540_ 52540_47473_52540_ E_30 5_3_2 30 A_2129 B_14320 E_12913 --A_51 B_190 E_2808 --A_2129 B_14320 E_12913 -- 50969_endn_99999 endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--EF-hand--P-loop containing nucleotide triphosphate hydrolases-- 52799_56091_50249_ 52799_56091_50249_ E_16 3_2_1 16 A_16 B_112 E_1201 --A_34 B_180 E_92 --A_390 B_2734 E_1438 -- endn_99999 endc NOTPDB CPL (Phosphotyrosine protein) phosphatases II--DNA ligase/mRNA capping enzyme, catalytic domain--Nucleic acid-binding proteins-- 56219_56672_53098_ 56219_56672_53098_ E_2 3_2_1 2 A_14 B_311 E_899 --A_66 B_378 E_3164 --A_290 B_2494 E_2335 -- endn_56672 endc NOTPDB CPL DNase I-like--DNA/RNA polymerases--Ribonuclease H-like-- 47473_48726_48726_ 47473_48726_48726_ E_10 5_3_2 10 A_51 B_190 E_2808 --A_14 B_78 E_4071 --A_14 B_78 E_4071 -- 50969_endn_57467 50969_99999 NOTPDB RPT EF-hand--Immunoglobulin--Immunoglobulin-- 57850_57850_57850_ 57850_57850_57850_ E_29 8_5_3 29 A_19 B_52 E_3605 --A_19 B_52 E_3605 --A_19 B_52 E_3605 -- 53223_endn_51197_57850_99999 endc_57850_99999 NOTPDB RPT RING finger domain, C3HC4--RING finger domain, C3HC4--RING finger domain, C3HC4-- 51445_57625_57625_ 51445_57625_57625_ E_3 3_1_2 3 A_89 B_1646 E_1474 --B_2 E_246 --B_2 E_246 -- endn endc_51445 NOTPDB RPT (Trans)glycosidases--Tachycitin--Tachycitin-- 57196_56436_57535_ 57196_56436_57535_ E_16 6_4_2 16 A_2 B_7 E_2358 --A_2 B_62 E_1409 --B_3 E_582 -- 57196_endn_56436_99999 endc_99999 NOTPDB CPL EGF/Laminin--C-type lectin-like--Complement control module/SCR domain-- 53300_81995_81811_ 53300_81995_81811_ E_37 5_3_2 37 A_51 B_345 E_996 --A_1 B_2 E_111 --B_2 E_94 -- endn_82919_81995 82754_endc INPDB CPL vWA-like--beta-sandwich domain of Sec23/24--Helical domain of Sec23/24-- 49899_49899_56496_ 49899_49899_56496_ E_11 5_2_3 11 A_22 B_208 E_1314 --A_22 B_208 E_1314 --A_2 B_3 E_372 -- endn_49785 49899_endc_99999 NOTPDB RPT Concanavalin A-like lectins/glucanases--Concanavalin A-like lectins/glucanases--Fibrinogen C-terminal domain-like-- 50729_47031_50729_ 50729_47031_50729_ E_9 3_2_1 9 A_14 B_44 E_3057 --B_13 E_440 --A_14 B_44 E_3057 -- endn_99999 endc NOTPDB CPL PH domain-like--Second domain of FERM--PH domain-like-- 57424_57424_57424_ 57424_57424_57424_ E_200 22_13_9 200 E_497 --E_497 --E_497 -- 63501_endn_57424_57667_63825_49854_57283_63829_57196_48726_57501_57567_99999 57196_63501_81321_57424_50494_48726_57184_endc_99999 INPDB RPT LDL receptor-like module--LDL receptor-like module--LDL receptor-like module-- 49417_55550_49417_ 49417_55550_49417_ E_2 3_2_1 2 A_10 B_39 E_458 --A_4 B_15 E_910 --A_10 B_39 E_458 -- endn_47655 endc NOTPDB CPL p53-like transcription factors--SH2 domain--p53-like transcription factors-- 51045_51045_56204_ 51045_51045_56204_ E_58 3_2_1 58 B_5 E_413 --B_5 E_413 --A_2 E_276 -- 51045_99999 endc NOTPDB RPT WW domain--WW domain--Ubiquitin-protein ligase E3a, Hect catalytic domain (E6ap)-- 57196_57196_57440_ 57196_57196_57440_ E_4 4_2_2 4 A_2 B_7 E_2358 --A_2 B_7 E_2358 --A_6 B_6 E_228 -- endn_99999 50494_99999 NOTPDB RPT EGF/Laminin--EGF/Laminin--Kringle-like-- 54928_54791_54791_ 54928_54791_54791_ E_11 5_2_3 11 A_6 B_60 E_3471 --A_38 B_130 E_562 --A_38 B_130 E_562 -- 54928_endn 54791_99999_54814 NOTPDB RPT RNA-binding domain, RBD--Eukaryotic type KH-domain (eKH-domain)--Eukaryotic type KH-domain (eKH-domain)-- 57424_57424_57184_ 57424_57424_57184_ E_9 7_3_4 9 E_497 --E_497 --B_4 E_859 -- 57424_endn_99999 57196_57424_63825_99999 NOTPDB RPT LDL receptor-like module--LDL receptor-like module--Growth factor receptor domain-- 82199_57667_57667_ 82199_57667_57667_ E_9 5_2_3 9 A_2 B_29 E_692 --A_23 B_24 E_4849 --A_23 B_24 E_4849 -- endn_99999 57667_endc_99999 NOTPDB RPT SET domain--C2H2 and C2HC zinc fingers--C2H2 and C2HC zinc fingers-- 48403_74924_74924_ 48403_74924_74924_ E_4 4_2_2 4 A_4 B_168 E_2348 --B_2 E_135 --B_2 E_135 -- endn_99999 endc_99999 NOTPDB RPT Ankyrin repeat--Cap-Gly domain--Cap-Gly domain-- 54928_54928_54928_ 54928_54928_54928_ E_289 9_6_3 289 A_6 B_60 E_3471 --A_6 B_60 E_3471 --A_6 B_60 E_3471 -- 54928_endn_48208_53316_53098_99999 54928_endc_99999 NOTPDB RPT RNA-binding domain, RBD--RNA-binding domain, RBD--RNA-binding domain, RBD-- 47473_46966_46966_ 47473_46966_46966_ E_2 3_1_2 2 A_51 B_190 E_2808 --A_7 B_30 E_584 --A_7 B_30 E_584 -- endn 46966_99999 NOTPDB RPT EF-hand--Spectrin repeat--Spectrin repeat-- 57630_57196_57196_ 57630_57196_57196_ E_22 6_2_4 22 E_52 --A_2 B_7 E_2358 --A_2 B_7 E_2358 -- endn_99999 57196_50494_endc_99999 INPDB RPT GLA-domain--EGF/Laminin--EGF/Laminin-- 47220_56672_53098_ 47220_56672_53098_ E_3 4_2_2 3 A_6 B_4 E_147 --A_66 B_378 E_3164 --A_290 B_2494 E_2335 -- 50630_endn endc_99999 NOTPDB CPL alpha-catenin/vinculin--DNA/RNA polymerases--Ribonuclease H-like-- 51445_57016_57016_ 51445_57016_57016_ E_3 4_2_2 3 A_89 B_1646 E_1474 --B_1 E_48 --B_1 E_48 -- endn_99999 57016_endc NOTPDB RPT (Trans)glycosidases--Plant lectins/antimicrobial peptides--Plant lectins/antimicrobial peptides-- 57850_49599_50978_ 57850_49599_50978_ E_5 4_3_1 5 A_19 B_52 E_3605 --A_1 E_685 --A_7 B_101 E_3576 -- endn_49503_99999 endc NOTPDB CPL RING finger domain, C3HC4--TRAF domain-like--WD40-repeat-- 57414_57414_50494_ 57414_57414_50494_ E_3 3_2_1 3 B_5 E_136 --B_5 E_136 --A_19 B_482 E_1600 -- 99999_57414 endc NOTPDB RPT Hairpin loop containing domain-like--Hairpin loop containing domain-like--Trypsin-like serine proteases-- 57302_57302_57302_ 57302_57302_57302_ E_13 6_3_3 13 A_3 B_7 E_578 --A_3 B_7 E_578 --A_3 B_7 E_578 -- 57302_endn_99999 57302_endc_99999 NOTPDB RPT Snake toxin-like--Snake toxin-like--Snake toxin-like-- 49854_69848_49785_ 49854_69848_49785_ E_10 4_2_2 10 B_1 E_636 --E_59 --A_10 B_366 E_724 -- endn_99999 endc_99999 NOTPDB CPL Spermadhesin, CUB domain--LCCL domain--Galactose-binding domain-like-- 54001_49309_49309_ 54001_49309_49309_ E_47 3_2_1 47 A_60 B_262 E_1838 --A_22 B_24 E_79 --A_22 B_24 E_79 -- endn_81296 endc INPDB RPT Cysteine proteinases--Transglutaminase, two C-terminal domains--Transglutaminase, two C-terminal domains-- 53098_53098_53098_ 53098_53098_53098_ E_4 5_3_2 4 A_290 B_2494 E_2335 --A_290 B_2494 E_2335 --A_290 B_2494 E_2335 -- 56672_99999_53098 endc_53098 NOTPDB RPT Ribonuclease H-like--Ribonuclease H-like--Ribonuclease H-like-- 57667_57667_57903_ 57667_57667_57903_ E_9 5_3_2 9 A_23 B_24 E_4849 --A_23 B_24 E_4849 --A_56 B_38 E_1435 -- endn_57667_99999 57667_99999 NOTPDB RPT C2H2 and C2HC zinc fingers--C2H2 and C2HC zinc fingers--FYVE/PHD zinc finger-- 57184_57184_57184_ 57184_57184_57184_ E_12 8_3_5 12 B_4 E_859 --B_4 E_859 --B_4 E_859 -- endn_57184_99999 57196_57586_57184_endc_99999 NOTPDB RPT Growth factor receptor domain--Growth factor receptor domain--Growth factor receptor domain-- 57903_57903_57903_ 57903_57903_57903_ E_7 6_3_3 7 A_56 B_38 E_1435 --A_56 B_38 E_1435 --A_56 B_38 E_1435 -- endn_57889_99999 endc_63748_99999 NOTPDB RPT FYVE/PHD zinc finger--FYVE/PHD zinc finger--FYVE/PHD zinc finger-- 52540_52540_52047_ 52540_52540_52047_ E_8 5_2_3 8 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --A_9 B_93 E_2576 -- endn_99999 52540_endc_99999 NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--RNI-like-- 47616_52374_50715_ 47616_52374_50715_ E_10 6_3_3 10 A_7 B_434 E_765 --A_247 B_1540 E_642 --A_17 B_116 E_46 -- endn_52833_99999 47060_endc_99999 NOTPDB CPL Glutathione S-transferase (GST), C-terminal domain--Nucleotidylyl transferase--Ribosomal protein L25-like-- 57196_57184_57184_ 57196_57184_57184_ E_14 6_3_3 14 A_2 B_7 E_2358 --B_4 E_859 --B_4 E_859 -- 57196_endn_99999 57196_endc_99999 NOTPDB RPT EGF/Laminin--Growth factor receptor domain--Growth factor receptor domain-- 52047_52058_52540_ 52047_52058_52540_ E_2 3_2_1 2 A_9 B_93 E_2576 --A_6 B_143 E_2568 --A_2129 B_14320 E_12913 -- 52540_99999 endc NOTPDB CPL RNI-like--L domain-like--P-loop containing nucleotide triphosphate hydrolases-- 52540_50800_52374_ 52540_50800_52374_ E_17 3_2_1 17 A_2129 B_14320 E_12913 --A_21 B_142 E_93 --A_247 B_1540 E_642 -- endn_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--PK beta-barrel domain-like--Nucleotidylyl transferase-- 57196_49899_57196_ 57196_49899_57196_ E_52 8_4_4 52 A_2 B_7 E_2358 --A_22 B_208 E_1314 --A_2 B_7 E_2358 -- 57196_49899_57184_99999 57196_49899_endc_99999 NOTPDB CPL EGF/Laminin--Concanavalin A-like lectins/glucanases--EGF/Laminin-- 54791_54791_54814_ 54791_54791_54814_ E_21 7_4_3 21 A_38 B_130 E_562 --A_38 B_130 E_562 --A_82 B_390 E_98 -- 54928_endn_54791_99999 54791_endc_99999 NOTPDB RPT Eukaryotic type KH-domain (eKH-domain)--Eukaryotic type KH-domain (eKH-domain)--Prokaryotic type KH domain (pKH-domain)-- 57756_52540_52540_ 57756_52540_52540_ E_8 5_2_3 8 A_11 B_19 E_1238 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- 57756_99999 52540_endc_99999 NOTPDB RPT Retrovirus zinc finger-like domains--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 57535_48726_48726_ 57535_48726_48726_ E_3 5_3_2 3 B_3 E_582 --A_14 B_78 E_4071 --A_14 B_78 E_4071 -- endn_48726_99999 endc_99999 NOTPDB RPT Complement control module/SCR domain--Immunoglobulin--Immunoglobulin-- 52025_53187_47672_ 52025_53187_47672_ E_41 4_2_2 41 A_6 B_44 E_200 --A_105 B_1042 E_648 --B_1 E_54 -- endn_99999 endc_99999 INPDB CPL Transferrin receptor ectodomain, apical domain--Zn-dependent exopeptidases--Transferrin receptor ectodomain, C-terminal domain-- 52058_48726_48726_ 52058_48726_48726_ E_18 6_3_3 18 A_6 B_143 E_2568 --A_14 B_78 E_4071 --A_14 B_78 E_4071 -- endn_52058_99999 48726_endc_99999 NOTPDB RPT L domain-like--Immunoglobulin--Immunoglobulin-- 57362_82895_82895_ 57362_82895_82895_ E_6 5_3_2 6 A_1 B_1 E_226 --E_618 --E_618 -- endn_82895_99999 51126_endc NOTPDB RPT BPTI-like--TSP-1 type 1 repeat--TSP-1 type 1 repeat-- 57586_57586_57586_ 57586_57586_57586_ E_21 6_3_3 21 A_15 B_23 E_359 --A_15 B_23 E_359 --A_15 B_23 E_359 -- endn_57586_99999 57586_endc_99999 INPDB RPT TNF receptor-like--TNF receptor-like--TNF receptor-like-- 47060_55681_52954_ 47060_55681_52954_ E_17 4_2_2 17 A_18 B_103 E_93 --A_205 B_1250 E_450 --A_75 B_353 E_158 -- endn_47060 64586_endc NOTPDB CPL S15/NS1 RNA-binding domain--Class II aaRS and biotin synthetases--Anticodon-binding domain of Class II aaRS-- 56487_57424_57424_ 56487_57424_57424_ E_8 5_2_3 8 B_1 E_193 --E_497 --E_497 -- endn_57467 50494_99999_57414 NOTPDB RPT Scavenger receptor cysteine-rich (SRCR) domain--LDL receptor-like module--LDL receptor-like module-- 49265_57603_57603_ 49265_57603_57603_ E_3 4_2_2 3 A_23 B_135 E_1734 --B_1 E_56 --B_1 E_56 -- 99999_49265 57603_endc NOTPDB RPT Fibronectin type III--Fibronectin type I module--Fibronectin type I module-- 57610_57567_57567_ 57610_57567_57567_ E_3 4_2_2 3 A_1 B_1 E_118 --E_254 --E_254 -- 99999_57567 99999_57567 NOTPDB RPT Thyroglobulin type-1 domain--Serine proterase inhibitors--Serine proterase inhibitors-- 57667_57903_57667_ 57667_57903_57667_ E_13 5_3_2 13 A_23 B_24 E_4849 --A_56 B_38 E_1435 --A_23 B_24 E_4849 -- endn_57667_99999 57667_99999 NOTPDB CPL C2H2 and C2HC zinc fingers--FYVE/PHD zinc finger--C2H2 and C2HC zinc fingers-- 47655_49417_55550_ 47655_49417_55550_ E_33 6_3_3 33 A_3 B_5 E_84 --A_10 B_39 E_458 --A_4 B_15 E_910 -- 48092_endn_99999 49417_endc_99999 INPDB CPL STAT--p53-like transcription factors--SH2 domain-- 48726_48726_56112_ 48726_48726_56112_ E_15 6_4_2 15 A_14 B_78 E_4071 --A_14 B_78 E_4071 --A_114 B_971 E_9319 -- endn_48726_49265_99999 endc_99999 NOTPDB RPT Immunoglobulin--Immunoglobulin--Protein kinase-like (PK-like)-- 57581_57196_57581_ 57581_57196_57581_ E_40 5_3_2 40 B_2 E_61 --A_2 B_7 E_2358 --B_2 E_61 -- 57196_endn_99999 57196_99999 NOTPDB CPL TB module/8-cys domain--EGF/Laminin--TB module/8-cys domain-- 50729_49562_48350_ 50729_49562_48350_ E_28 7_5_2 28 A_14 B_44 E_3057 --B_12 E_1627 --B_8 E_786 -- endn_50729_48065_55550_99999 endc_99999 NOTPDB CPL PH domain-like--C2 domain (Calcium/lipid-binding domain, CaLB)--GTPase activation domain, GAP-- 57196_57196_50965_ 57196_57196_50965_ E_15 5_2_3 15 A_2 B_7 E_2358 --A_2 B_7 E_2358 --A_4 B_35 E_898 -- 49854_99999 56436_endc_99999 NOTPDB RPT EGF/Laminin--EGF/Laminin--Galactose oxidase, central domain-- 57783_57667_57667_ 57783_57667_57667_ E_30 7_4_3 30 A_193 B_620 E_393 --A_23 B_24 E_4849 --A_23 B_24 E_4849 -- 57667_57783_57850_99999 57667_endc_99999 NOTPDB RPT Zinc beta-ribbon--C2H2 and C2HC zinc fingers--C2H2 and C2HC zinc fingers-- 57184_57196_57196_ 57184_57196_57196_ E_73 17_11_6 73 B_4 E_859 --A_2 B_7 E_2358 --A_2 B_7 E_2358 -- 47686_endn_57095_57184_53300_49854_63829_57196_82153_69322_99999 57196_56436_63825_57184_endc_99999 NOTPDB RPT Growth factor receptor domain--EGF/Laminin--EGF/Laminin-- 57184_52058_57184_ 57184_52058_57184_ E_18 6_2_4 18 B_4 E_859 --A_6 B_143 E_2568 --B_4 E_859 -- 52058_99999 57184_endc_99999_56112 INPDB CPL Growth factor receptor domain--L domain-like--Growth factor receptor domain-- 48065_50729_48366_ 48065_50729_48366_ E_10 5_3_2 10 A_3 B_7 E_597 --A_14 B_44 E_3057 --E_271 -- 47113_endn_99999 endc_99999 NOTPDB CPL DBL homology domain (DH-domain)--PH domain-like--Ras GEF-- 57196_49854_57196_ 57196_49854_57196_ E_22 7_3_4 22 A_2 B_7 E_2358 --B_1 E_636 --A_2 B_7 E_2358 -- endn_49854_99999 57196_50965_49854_99999 NOTPDB CPL EGF/Laminin--Spermadhesin, CUB domain--EGF/Laminin-- 49265_48726_49265_ 49265_48726_49265_ E_75 8_4_4 75 A_23 B_135 E_1734 --A_14 B_78 E_4071 --A_23 B_135 E_1734 -- endn_48726_99999_49265 48726_endc_99999_49265 NOTPDB CPL Fibronectin type III--Immunoglobulin--Fibronectin type III-- 63825_57196_63825_ 63825_57196_63825_ E_15 8_3_5 15 A_7 B_35 E_205 --A_2 B_7 E_2358 --A_7 B_35 E_205 -- 57196_57440_endn 57196_57424_75011_endc_99999 NOTPDB CPL Low density lipoprotein (LDL) receptor YWTD domain--EGF/Laminin--Low density lipoprotein (LDL) receptor YWTD domain-- 51246_55326_56042_ 51246_55326_56042_ E_15 5_2_3 15 A_31 B_372 E_107 --A_92 B_231 E_44 --A_93 B_263 E_63 -- endn_56059 55326_53328_endc NOTPDB CPL Rudiment single hybrid motif--Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain--Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain-- 50978_50978_48452_ 50978_50978_48452_ E_5 3_1_2 5 A_7 B_101 E_3576 --A_7 B_101 E_3576 --A_146 B_1937 E_3442 -- endn endc_99999 NOTPDB RPT WD40-repeat--WD40-repeat--TPR-like-- 57196_57196_57196_ 57196_57196_57196_ E_705 42_27_15 705 A_2 B_7 E_2358 --A_2 B_7 E_2358 --A_2 B_7 E_2358 -- 50969_56436_endn_49899_57362_57095_57184_53597_53300_57630_49265_57535_52047_57196_52799_48726_57581_57567_54511_69179_49854_82895_57302_82153_50939_57501_99999 50242_49899_69687_57184_53300_endc_49265_57196_49785_48726_57467_57501_57581_99999_57567 INPDB RPT EGF/Laminin--EGF/Laminin--EGF/Laminin-- 57196_57196_69687_ 57196_57196_69687_ E_37 5_3_2 37 A_2 B_7 E_2358 --A_2 B_7 E_2358 --E_40 -- 57196_69179_99999 endc_99999 INPDB RPT EGF/Laminin--EGF/Laminin--Integrin beta tail domain-- 54768_47113_82708_ 54768_47113_82708_ E_3 3_2_1 3 A_18 B_198 E_397 --A_42 B_30 E_1066 --B_37 E_68 -- endn_54768 endc NOTPDB CPL dsRNA-binding domain-like--Histone-fold--R3H domain-- 57610_57610_57610_ 57610_57610_57610_ E_4 5_3_2 4 A_1 B_1 E_118 --A_1 B_1 E_118 --A_1 B_1 E_118 -- 57196_endn_99999 50969_99999 NOTPDB RPT Thyroglobulin type-1 domain--Thyroglobulin type-1 domain--Thyroglobulin type-1 domain-- 56436_56436_49854_ 56436_56436_49854_ E_38 7_3_4 38 A_2 B_62 E_1409 --A_2 B_62 E_1409 --B_1 E_636 -- endn_49854_99999 56436_endc_49854_99999 NOTPDB RPT C-type lectin-like--C-type lectin-like--Spermadhesin, CUB domain-- 57903_47370_63748_ 57903_47370_63748_ E_16 4_2_2 16 A_56 B_38 E_1435 --A_3 B_4 E_452 --A_4 B_5 E_441 -- endn_99999 endc_99999 NOTPDB CPL FYVE/PHD zinc finger--Bromodomain--Tudor/PWWP-- 49854_49854_57424_ 49854_49854_57424_ E_21 6_4_2 21 B_1 E_636 --B_1 E_636 --E_497 -- 82671_endn_49854_99999 57424_99999 NOTPDB RPT Spermadhesin, CUB domain--Spermadhesin, CUB domain--LDL receptor-like module-- 53098_51569_53098_ 53098_51569_53098_ E_2 3_2_1 2 A_290 B_2494 E_2335 --A_136 B_1089 E_356 --A_290 B_2494 E_2335 -- endn_56672 endc NOTPDB CPL Ribonuclease H-like--Aldolase--Ribonuclease H-like-- 57492_57492_57492_ 57492_57492_57492_ E_5 5_2_3 5 B_1 E_71 --B_1 E_71 --B_1 E_71 -- endn_99999 endc_99999_82895 NOTPDB RPT Trefoil--Trefoil--Trefoil-- 48403_48403_48403_ 48403_48403_48403_ E_24 8_4_4 24 A_4 B_168 E_2348 --A_4 B_168 E_2348 --A_4 B_168 E_2348 -- 52540_endn_48403_99999 57903_48403_endc_99999 NOTPDB RPT Ankyrin repeat--Ankyrin repeat--Ankyrin repeat-- 57716_57716_57716_ 57716_57716_57716_ E_325 14_9_5 325 A_72 B_426 E_2067 --A_72 B_426 E_2067 --A_72 B_426 E_2067 -- endn_57586_50156_48695_54862_57716_57903_99999_57850 57716_50156_endc_46689_99999 INPDB RPT Glucocorticoid receptor-like (DNA-binding domain)--Glucocorticoid receptor-like (DNA-binding domain)--Glucocorticoid receptor-like (DNA-binding domain)-- 57196_57196_49265_ 57196_57196_49265_ E_12 5_3_2 12 A_2 B_7 E_2358 --A_2 B_7 E_2358 --A_23 B_135 E_1734 -- 57196_endn_57184 99999_49265 NOTPDB RPT EGF/Laminin--EGF/Laminin--Fibronectin type III-- 57467_50494_50156_ 57467_50494_50156_ E_12 4_3_1 12 A_2 B_8 E_358 --A_19 B_482 E_1600 --A_28 B_534 E_1380 -- endn_57184_99999 endc NOTPDB CPL Ovomucoid/PCI-1 like inhibitors--Trypsin-like serine proteases--PDZ domain-like-- 52087_46966_46966_ 52087_46966_46966_ E_15 3_1_2 15 B_5 E_404 --A_7 B_30 E_584 --A_7 B_30 E_584 -- endn 46966_99999 NOTPDB RPT C-terminal domain of phosphatidylinositol transfer protein sec14p--Spectrin repeat--Spectrin repeat-- 49599_49599_54695_ 49599_49599_54695_ E_3 3_1_2 3 A_1 E_685 --A_1 E_685 --B_6 E_2078 -- endn 49599_99999 NOTPDB RPT TRAF domain-like--TRAF domain-like--POZ domain-- 51045_50729_48350_ 51045_50729_48350_ E_4 3_2_1 4 B_5 E_413 --A_14 B_44 E_3057 --B_8 E_786 -- endn_99999 endc NOTPDB CPL WW domain--PH domain-like--GTPase activation domain, GAP-- 57716_57716_50156_ 57716_57716_50156_ E_12 5_3_2 12 A_72 B_426 E_2067 --A_72 B_426 E_2067 --A_28 B_534 E_1380 -- endn_57716_57903 56112_99999 NOTPDB RPT Glucocorticoid receptor-like (DNA-binding domain)--Glucocorticoid receptor-like (DNA-binding domain)--PDZ domain-like-- 57196_57196_53300_ 57196_57196_53300_ E_17 6_3_3 17 A_2 B_7 E_2358 --A_2 B_7 E_2358 --A_51 B_345 E_996 -- 57196_53300_99999 57196_endc_99999 NOTPDB RPT EGF/Laminin--EGF/Laminin--vWA-like-- 57196_49854_49854_ 57196_49854_49854_ E_13 6_3_3 13 A_2 B_7 E_2358 --B_1 E_636 --B_1 E_636 -- 57196_49854_99999 endc_49854_99999 NOTPDB RPT EGF/Laminin--Spermadhesin, CUB domain--Spermadhesin, CUB domain-- 57196_49785_49785_ 57196_49785_49785_ E_14 3_2_1 14 A_2 B_7 E_2358 --A_10 B_366 E_724 --A_10 B_366 E_724 -- 57196_endn endc NOTPDB RPT EGF/Laminin--Galactose-binding domain-like--Galactose-binding domain-like-- 47473_57467_57610_ 47473_57467_57610_ E_2 3_1_2 2 A_51 B_190 E_2808 --A_2 B_8 E_358 --A_1 B_1 E_118 -- endn endc_99999 NOTPDB CPL EF-hand--Ovomucoid/PCI-1 like inhibitors--Thyroglobulin type-1 domain-- 49265_49265_56112_ 49265_49265_56112_ E_16 8_5_3 16 A_23 B_135 E_1734 --A_23 B_135 E_1734 --A_114 B_971 E_9319 -- endn_57586_48726_99999_49265 48726_endc_99999 NOTPDB RPT Fibronectin type III--Fibronectin type III--Protein kinase-like (PK-like)-- 82153_82153_82153_ 82153_82153_82153_ E_28 5_3_2 28 A_4 B_33 E_126 --A_4 B_33 E_126 --A_4 B_33 E_126 -- 82153_55909_99999 82153_99999 NOTPDB RPT FAS1 domain--FAS1 domain--FAS1 domain-- 53383_53335_46785_ 53383_53335_46785_ E_2 3_1_2 2 A_367 B_2974 E_1139 --A_733 B_3918 E_2070 --A_1241 B_7979 E_2143 -- endn endc_99999 NOTPDB CPL PLP-dependent transferases--S-adenosyl-L-methionine-dependent methyltransferases--"Winged helix" DNA-binding domain-- 63501_53187_49464_ 63501_53187_49464_ E_6 4_2_2 6 A_1 E_180 --A_105 B_1042 E_648 --A_30 B_195 E_96 -- endn_99999 endc_99999 NOTPDB CPL Frizzled cystein-rich domain--Zn-dependent exopeptidases--Carboxypeptidase D, a regulatory domain-- 56487_56487_56487_ 56487_56487_56487_ E_81 9_5_4 81 B_1 E_193 --B_1 E_193 --B_1 E_193 -- 57440_endn_56487_49854_99999 50494_56487_endc_99999 NOTPDB RPT Scavenger receptor cysteine-rich (SRCR) domain--Scavenger receptor cysteine-rich (SRCR) domain--Scavenger receptor cysteine-rich (SRCR) domain-- 50729_57903_50729_ 50729_57903_50729_ E_23 4_2_2 23 A_14 B_44 E_3057 --A_56 B_38 E_1435 --A_14 B_44 E_3057 -- endn_48065 endc_99999 NOTPDB CPL PH domain-like--FYVE/PHD zinc finger--PH domain-like-- 57424_57424_57196_ 57424_57424_57196_ E_76 6_3_3 76 E_497 --E_497 --A_2 B_7 E_2358 -- endn_57424_99999 57196_63825_endc INPDB RPT LDL receptor-like module--LDL receptor-like module--EGF/Laminin-- 52540_52540_52058_ 52540_52540_52058_ E_12 7_4_3 12 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 --A_6 B_143 E_2568 -- endn_53383_47240_99999 52058_endc_99999 NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases--L domain-like-- 47060_47060_47060_ 47060_47060_47060_ E_7 6_4_2 7 A_18 B_103 E_93 --A_18 B_103 E_93 --A_18 B_103 E_93 -- endn_47060_50715_99999 55681_47060 NOTPDB RPT S15/NS1 RNA-binding domain--S15/NS1 RNA-binding domain--S15/NS1 RNA-binding domain-- 57667_57667_57667_ 57667_57667_57667_ E_2581 46_30_16 2581 A_23 B_24 E_4849 --A_23 B_24 E_4849 --A_23 B_24 E_4849 -- 47380_54001_endn_63763_82199_54862_50249_51351_54211_56672_48726_57903_57825_47862_50814_57850_54984_57667_57586_57774_57783_53098_52467_81271_53383_49599_50939_56091_56327_99999 52047_49599_57667_57903_50939_48726_55307_57783_51735_endc_57825_47175_82919_82199_54862_99999 INPDB RPT C2H2 and C2HC zinc fingers--C2H2 and C2HC zinc fingers--C2H2 and C2HC zinc fingers-- 49562_48371_56112_ 49562_48371_56112_ E_58 6_3_3 58 B_12 E_1627 --A_73 B_255 E_3951 --A_114 B_971 E_9319 -- endn_54236_99999 64268_endc_99999 INPDB CPL C2 domain (Calcium/lipid-binding domain, CaLB)--ARM repeat--Protein kinase-like (PK-like)-- 57424_56487_50494_ 57424_56487_50494_ E_23 7_5_2 23 E_497 --B_1 E_193 --A_19 B_482 E_1600 -- 57424_56487_49854_99999_57414 endc_99999 NOTPDB CPL LDL receptor-like module--Scavenger receptor cysteine-rich (SRCR) domain--Trypsin-like serine proteases-- 52540_57774_52540_ 52540_57774_52540_ E_3 4_2_2 3 A_2129 B_14320 E_12913 --A_17 B_84 E_96 --A_2129 B_14320 E_12913 -- 52540_endn 57774_endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Microbial and mitochondrial ADK, insert "zinc finger" domain--P-loop containing nucleotide triphosphate hydrolases-- 57440_56436_56436_ 57440_56436_56436_ E_22 5_2_3 22 A_6 B_6 E_228 --A_2 B_62 E_1409 --A_2 B_62 E_1409 -- endn_50370 56436_endc_99999 NOTPDB RPT Kringle-like--C-type lectin-like--C-type lectin-like-- 53300_53300_57196_ 53300_53300_57196_ E_2 4_2_2 2 A_51 B_345 E_996 --A_51 B_345 E_996 --A_2 B_7 E_2358 -- 57196_endn 57196_endc NOTPDB RPT vWA-like--vWA-like--EGF/Laminin-- 57362_57362_57362_ 57362_57362_57362_ E_26 9_4_5 26 A_1 B_1 E_226 --A_1 B_1 E_226 --A_1 B_1 E_226 -- 57196_endn_57362_99999 57196_48726_57362_endc_99999 NOTPDB RPT BPTI-like--BPTI-like--BPTI-like-- 48403_52540_52540_ 48403_52540_52540_ E_2 4_2_2 2 A_4 B_168 E_2348 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- 52540_endn endc_99999 NOTPDB RPT Ankyrin repeat--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 57716_57903_57716_ 57716_57903_57716_ E_4 4_2_2 4 A_72 B_426 E_2067 --A_56 B_38 E_1435 --A_72 B_426 E_2067 -- endn_54862 57716_99999 NOTPDB CPL Glucocorticoid receptor-like (DNA-binding domain)--FYVE/PHD zinc finger--Glucocorticoid receptor-like (DNA-binding domain)-- 52058_52047_52540_ 52058_52047_52540_ E_2 3_2_1 2 A_6 B_143 E_2568 --A_9 B_93 E_2576 --A_2129 B_14320 E_12913 -- 52540_99999 endc NOTPDB CPL L domain-like--RNI-like--P-loop containing nucleotide triphosphate hydrolases-- 57581_57184_57581_ 57581_57184_57581_ E_17 5_3_2 17 B_2 E_61 --B_4 E_859 --B_2 E_61 -- 57196_endn_99999 57196_99999 NOTPDB CPL TB module/8-cys domain--Growth factor receptor domain--TB module/8-cys domain-- 48726_63501_57440_ 48726_63501_57440_ E_8 4_2_2 8 A_14 B_78 E_4071 --A_1 E_180 --A_6 B_6 E_228 -- endn_99999 56112_99999 NOTPDB CPL Immunoglobulin--Frizzled cystein-rich domain--Kringle-like-- 55326_56042_53328_ 55326_56042_53328_ E_12 3_2_1 12 A_92 B_231 E_44 --A_93 B_263 E_63 --A_12 B_276 E_59 -- 51246_56042 endc NOTPDB CPL Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain--Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain--Formyltransferase-- 57184_57184_57196_ 57184_57184_57196_ E_17 7_4_3 17 B_4 E_859 --B_4 E_859 --A_2 B_7 E_2358 -- 57196_endn_57184_99999 57196_57184_99999 NOTPDB RPT Growth factor receptor domain--Growth factor receptor domain--EGF/Laminin-- 49599_49599_49599_ 49599_49599_49599_ E_42 7_4_3 42 A_1 E_685 --A_1 E_685 --A_1 E_685 -- endn_49599_99999_57850 49599_endc_99999 NOTPDB RPT TRAF domain-like--TRAF domain-like--TRAF domain-like-- 47576_47576_47576_ 47576_47576_47576_ E_32 8_4_4 32 B_8 E_704 --B_8 E_704 --B_8 E_704 -- endn_47576_47473_99999 81296_47576_endc_99999 NOTPDB RPT Calponin-homology domain, CH-domain--Calponin-homology domain, CH-domain--Calponin-homology domain, CH-domain-- 50486_47336_53720_ 50486_47336_53720_ E_9 3_2_1 9 A_2 B_165 E_46 --A_4 B_486 E_88 --A_55 B_835 E_336 -- endn_53328 endc NOTPDB CPL FMT C-terminal domain-like--ACP-like--ALDH-like-- 48065_50729_50044_ 48065_50729_50044_ E_23 5_3_2 23 A_3 B_7 E_597 --A_14 B_44 E_3057 --A_2 B_84 E_1671 -- 46966_endn_99999 endc_99999 NOTPDB CPL DBL homology domain (DH-domain)--PH domain-like--SH3-domain-- 54928_52047_54427_ 54928_52047_54427_ E_5 5_2_3 5 A_6 B_60 E_3471 --A_9 B_93 E_2576 --A_11 B_446 E_248 -- endn_99999 46934_endc_99999 NOTPDB CPL RNA-binding domain, RBD--RNI-like--NTF2-like-- 49562_49562_49562_ 49562_49562_49562_ E_46 6_3_3 46 B_12 E_1627 --B_12 E_1627 --B_12 E_1627 -- endn_49562_99999 endc_49562_99999 NOTPDB RPT C2 domain (Calcium/lipid-binding domain, CaLB)--C2 domain (Calcium/lipid-binding domain, CaLB)--C2 domain (Calcium/lipid-binding domain, CaLB)-- 57196_57184_57196_ 57196_57184_57196_ E_117 18_9_9 117 A_2 B_7 E_2358 --B_4 E_859 --A_2 B_7 E_2358 -- 47686_endn_57184_57095_82895_57196_48726_57581_99999 82153_57196_48726_49899_57184_endc_57581_57535_99999 NOTPDB CPL EGF/Laminin--Growth factor receptor domain--EGF/Laminin-- 46966_46966_47473_ 46966_46966_47473_ E_74 6_3_3 74 A_7 B_30 E_584 --A_7 B_30 E_584 --A_51 B_190 E_2808 -- endn_46966_99999 47473_endc_99999 NOTPDB RPT Spectrin repeat--Spectrin repeat--EF-hand-- 57184_57581_57196_ 57184_57581_57196_ E_10 6_4_2 10 B_4 E_859 --B_2 E_61 --A_2 B_7 E_2358 -- 57196_endn_57581_99999 57196_99999 NOTPDB CPL Growth factor receptor domain--TB module/8-cys domain--EGF/Laminin-- 56112_64268_49562_ 56112_64268_49562_ E_3 3_2_1 3 A_114 B_971 E_9319 --B_5 E_392 --B_12 E_1627 -- 48371_99999 endc NOTPDB CPL Protein kinase-like (PK-like)--PX domain--C2 domain (Calcium/lipid-binding domain, CaLB)-- 81296_49265_49265_ 81296_49265_49265_ E_3 4_2_2 3 A_40 B_404 E_1207 --A_23 B_135 E_1734 --A_23 B_135 E_1734 -- 99999_49265 49265_99999 NOTPDB RPT E set domains--Fibronectin type III--Fibronectin type III-- 52087_46938_52087_ 52087_46938_52087_ E_2 3_2_1 2 B_5 E_404 --A_1 B_1 E_260 --B_5 E_404 -- endn_46938 endc NOTPDB CPL C-terminal domain of phosphatidylinositol transfer protein sec14p--N-terminal domain of phosphatidylinositol transfer protein sec14p--C-terminal domain of phosphatidylinositol transfer protein sec14p-- 51206_51206_56112_ 51206_51206_56112_ E_22 6_5_1 22 A_2 B_447 E_467 --A_2 B_447 E_467 --A_114 B_971 E_9319 -- 51206_47954_endn_46955_99999 endc NOTPDB RPT cAMP-binding domain-like--cAMP-binding domain-like--Protein kinase-like (PK-like)-- 53300_53300_53300_ 53300_53300_53300_ E_32 7_4_3 32 A_51 B_345 E_996 --A_51 B_345 E_996 --A_51 B_345 E_996 -- 82671_endn_53300_99999 endc_53300_99999 NOTPDB RPT vWA-like--vWA-like--vWA-like-- 52540_54980_54211_ 52540_54980_54211_ E_2 4_2_2 2 A_2129 B_14320 E_12913 --A_28 B_403 E_157 --A_200 B_1096 E_669 -- endn_50447 54980_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--EF-G/eEF-2 domains III and V--Ribosomal protein S5 domain 2-like-- 46934_52540_52540_ 46934_52540_52540_ E_2 3_1_2 2 A_21 B_114 E_420 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn endc_99999 NOTPDB RPT UBA-like--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 57196_57581_57196_ 57196_57581_57196_ E_25 7_5_2 25 A_2 B_7 E_2358 --B_2 E_61 --A_2 B_7 E_2358 -- 57196_endn_57184_57581_99999 57196_57581 NOTPDB CPL EGF/Laminin--TB module/8-cys domain--EGF/Laminin-- 57424_57424_81321_ 57424_57424_81321_ E_16 5_3_2 16 E_497 --E_497 --A_7 B_20 E_8234 -- 57059_57424_99999 endc_99999 NOTPDB RPT LDL receptor-like module--LDL receptor-like module--Family A G protein-coupled receptor-like-- 56672_56219_56672_ 56672_56219_56672_ E_2 4_2_2 2 A_66 B_378 E_3164 --A_14 B_311 E_899 --A_66 B_378 E_3164 -- 50630_99999 56672_53098 NOTPDB CPL DNA/RNA polymerases--DNase I-like--DNA/RNA polymerases-- 57196_56496_49899_ 57196_56496_49899_ E_15 5_2_3 15 A_2 B_7 E_2358 --A_2 B_3 E_372 --A_22 B_208 E_1314 -- 49899_99999 49899_endc_99999 NOTPDB CPL EGF/Laminin--Fibrinogen C-terminal domain-like--Concanavalin A-like lectins/glucanases-- 57196_57196_50969_ 57196_57196_50969_ E_7 5_2_3 7 A_2 B_7 E_2358 --A_2 B_7 E_2358 --A_24 B_218 E_336 -- 57424_99999 57196_endc_99999 NOTPDB RPT EGF/Laminin--EGF/Laminin--YVTN repeat-like/Quinoprotein amine dehydrogenase-- 57850_49599_50156_ 57850_49599_50156_ E_3 3_1_2 3 A_19 B_52 E_3605 --A_1 E_685 --A_28 B_534 E_1380 -- endn endc_99999 NOTPDB CPL RING finger domain, C3HC4--TRAF domain-like--PDZ domain-like-- 54403_54403_54403_ 54403_54403_54403_ E_7 4_2_2 7 A_5 B_15 E_194 --A_5 B_15 E_194 --A_5 B_15 E_194 -- endn_99999 endc_99999 NOTPDB RPT Cystatin/monellin--Cystatin/monellin--Cystatin/monellin-- 57184_57535_57535_ 57184_57535_57535_ E_3 4_2_2 3 B_4 E_859 --B_3 E_582 --B_3 E_582 -- endn_53300 endc_57535 NOTPDB RPT Growth factor receptor domain--Complement control module/SCR domain--Complement control module/SCR domain-- 55781_55781_48547_ 55781_55781_48547_ E_28 5_3_2 28 A_54 B_1030 E_131 --A_54 B_1030 E_131 --A_2 B_17 E_233 -- endn_55781_99999 endc_99999 NOTPDB RPT GAF domain-like--GAF domain-like--Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b-- 81383_81383_52047_ 81383_81383_52047_ E_2 3_1_2 2 B_8 E_2068 --B_8 E_2068 --A_9 B_93 E_2576 -- endn endc_99999 NOTPDB RPT F-box domain--F-box domain--RNI-like-- 57256_49265_49265_ 57256_49265_49265_ E_4 4_2_2 4 E_63 --A_23 B_135 E_1734 --A_23 B_135 E_1734 -- endn_99999 49265_99999 NOTPDB RPT Elafin-like--Fibronectin type III--Fibronectin type III-- 46548_52540_53795_ 46548_52540_53795_ E_8 3_1_2 8 A_125 B_477 E_67 --A_2129 B_14320 E_12913 --A_421 B_3843 E_485 -- endn endc_54862 NOTPDB CPL alpha-helical ferredoxin--P-loop containing nucleotide triphosphate hydrolases--PEP carboxykinase-like-- 57196_57535_57535_ 57196_57535_57535_ E_24 8_6_2 24 A_2 B_7 E_2358 --B_3 E_582 --B_3 E_582 -- 57196_56436_endn_57492_49854_57535 99999_57535 NOTPDB RPT EGF/Laminin--Complement control module/SCR domain--Complement control module/SCR domain-- 50729_46785_46785_ 50729_46785_46785_ E_7 5_2_3 7 A_14 B_44 E_3057 --A_1241 B_7979 E_2143 --A_1241 B_7979 E_2143 -- endn_48065 50156_endc_99999 NOTPDB RPT PH domain-like--"Winged helix" DNA-binding domain--"Winged helix" DNA-binding domain-- 57716_57586_57716_ 57716_57586_57716_ E_6 5_3_2 6 A_72 B_426 E_2067 --A_15 B_23 E_359 --A_72 B_426 E_2067 -- endn_57716_57903 57716_99999 NOTPDB CPL Glucocorticoid receptor-like (DNA-binding domain)--TNF receptor-like--Glucocorticoid receptor-like (DNA-binding domain)-- 57756_57756_57756_ 57756_57756_57756_ E_28 8_4_4 28 A_11 B_19 E_1238 --A_11 B_19 E_1238 --A_11 B_19 E_1238 -- 50249_endn_57756_99999 52540_57756_endc_99999 NOTPDB RPT Retrovirus zinc finger-like domains--Retrovirus zinc finger-like domains--Retrovirus zinc finger-like domains-- 54862_52540_53795_ 54862_52540_53795_ E_2 3_1_2 2 A_411 B_743 E_103 --A_2129 B_14320 E_12913 --A_421 B_3843 E_485 -- endn endc_54862 NOTPDB CPL 4Fe-4S ferredoxins--P-loop containing nucleotide triphosphate hydrolases--PEP carboxykinase-like-- 46565_52833_52833_ 46565_52833_52833_ E_10 5_2_3 10 A_12 B_326 E_827 --A_220 B_2517 E_2068 --A_220 B_2517 E_2068 -- endn_99999 52833_endc_99999 NOTPDB RPT Chaperone J-domain--Thioredoxin-like--Thioredoxin-like-- 54171_54171_54171_ 54171_54171_54171_ E_3 4_2_2 3 A_2 B_19 E_401 --A_2 B_19 E_401 --A_2 B_19 E_401 -- endn_99999 53613_99999 NOTPDB RPT DNA-binding domain--DNA-binding domain--DNA-binding domain-- 48403_48403_57903_ 48403_48403_57903_ E_12 3_2_1 12 A_4 B_168 E_2348 --A_4 B_168 E_2348 --A_56 B_38 E_1435 -- 48403_99999 endc NOTPDB RPT Ankyrin repeat--Ankyrin repeat--FYVE/PHD zinc finger-- 69318_69179_69179_ 69318_69179_69179_ E_95 7_4_3 95 A_6 B_79 E_181 --A_2 B_11 E_172 --A_2 B_11 E_172 -- endn_69179_53300_99999 69179_endc_99999 INPDB RPT Integrin alpha N-terminal domain--Integrin domains--Integrin domains-- 47836_47943_47353_ 47836_47943_47353_ E_2 3_1_2 2 B_2 E_137 --A_1 B_7 E_66 --A_3 B_6 E_153 -- endn endc_99999 NOTPDB CPL Retroviral matrix proteins--Retrovirus capsid protein, N-terminal core domain--Retrovirus capsid protein C-terminal domain-- 57567_82895_57567_ 57567_82895_57567_ E_3 5_3_2 3 E_254 --E_618 --E_254 -- 82895_57567_99999 57283_82895 NOTPDB CPL Serine proterase inhibitors--TSP-1 type 1 repeat--Serine proterase inhibitors-- 52540_51045_51045_ 52540_51045_51045_ E_11 4_2_2 11 A_2129 B_14320 E_12913 --B_5 E_413 --B_5 E_413 -- endn_50156 50156_99999 NOTPDB RPT P-loop containing nucleotide triphosphate hydrolases--WW domain--WW domain-- 57610_57610_50969_ 57610_57610_50969_ E_6 4_2_2 6 A_1 B_1 E_118 --A_1 B_1 E_118 --A_24 B_218 E_336 -- 57610_57184 57196_endc NOTPDB RPT Thyroglobulin type-1 domain--Thyroglobulin type-1 domain--YVTN repeat-like/Quinoprotein amine dehydrogenase-- 52833_47616_52374_ 52833_47616_52374_ E_3 3_1_2 3 A_220 B_2517 E_2068 --A_7 B_434 E_765 --A_247 B_1540 E_642 -- endn 47323_50715 NOTPDB CPL Thioredoxin-like--Glutathione S-transferase (GST), C-terminal domain--Nucleotidylyl transferase-- 57903_57667_57667_ 57903_57667_57667_ E_18 7_4_3 18 A_56 B_38 E_1435 --A_23 B_24 E_4849 --A_23 B_24 E_4849 -- endn_57667_57850_99999 57667_endc_99999 NOTPDB RPT FYVE/PHD zinc finger--C2H2 and C2HC zinc fingers--C2H2 and C2HC zinc fingers-- 57196_57196_57535_ 57196_57196_57535_ E_2 4_2_2 2 A_2 B_7 E_2358 --A_2 B_7 E_2358 --B_3 E_582 -- endn_99999 99999_57535 NOTPDB RPT EGF/Laminin--EGF/Laminin--Complement control module/SCR domain-- 81872_50249_81878_ 81872_50249_81878_ E_6 5_3_2 6 E_12 --A_390 B_2734 E_1438 --B_2 E_8 -- endn_81872_99999 50249_99999 INPDB CPL BRCA2 helical domain--Nucleic acid-binding proteins--BRCA2 tower domain-- 47923_47923_47473_ 47923_47923_47473_ E_20 4_2_2 20 A_1 B_2 E_469 --A_1 B_2 E_469 --A_51 B_190 E_2808 -- endn_99999 endc_99999 NOTPDB RPT Ypt/Rab-GAP domain of gyp1p--Ypt/Rab-GAP domain of gyp1p--EF-hand-- 57603_57440_50494_ 57603_57440_50494_ E_6 4_3_1 6 B_1 E_56 --A_6 B_6 E_228 --A_19 B_482 E_1600 -- 57196_endn_99999 endc NOTPDB CPL Fibronectin type I module--Kringle-like--Trypsin-like serine proteases-- 54695_54695_50965_ 54695_54695_50965_ E_15 3_2_1 15 B_6 E_2078 --B_6 E_2078 --A_4 B_35 E_898 -- endn_99999 endc NOTPDB RPT POZ domain--POZ domain--Galactose oxidase, central domain-- 54768_52540_52540_ 54768_52540_52540_ E_15 5_3_2 15 A_18 B_198 E_397 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn_54768_99999 52540_99999 NOTPDB RPT dsRNA-binding domain-like--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 82895_82895_57196_ 82895_82895_57196_ E_8 5_2_3 8 E_618 --E_618 --A_2 B_7 E_2358 -- 57196_82895 57196_57184_99999 NOTPDB RPT TSP-1 type 1 repeat--TSP-1 type 1 repeat--EGF/Laminin-- 52200_52540_52540_ 52200_52540_52540_ E_4 4_2_2 4 A_2 B_41 E_302 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn_99999 endc_99999 NOTPDB RPT Toll/Interleukin receptor TIR domain--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 57567_57567_57283_ 57567_57567_57283_ E_10 4_2_2 10 E_254 --E_254 --E_147 -- 82895_99999 82895_99999 NOTPDB RPT Serine proterase inhibitors--Serine proterase inhibitors--PMP inhibitors-- 57567_57283_57567_ 57567_57283_57567_ E_4 6_2_4 4 E_254 --E_147 --E_254 -- 82895_99999 57501_endc_57283_99999 NOTPDB CPL Serine proterase inhibitors--PMP inhibitors--Serine proterase inhibitors-- 57196_57196_49785_ 57196_57196_49785_ E_14 6_3_3 14 A_2 B_7 E_2358 --A_2 B_7 E_2358 --A_10 B_366 E_724 -- 57196_endn_99999 49785_endc_99999 NOTPDB RPT EGF/Laminin--EGF/Laminin--Galactose-binding domain-like-- 49854_57196_50965_ 49854_57196_50965_ E_6 5_2_3 6 B_1 E_636 --A_2 B_7 E_2358 --A_4 B_35 E_898 -- 57196_endn 56436_endc_99999 NOTPDB CPL Spermadhesin, CUB domain--EGF/Laminin--Galactose oxidase, central domain-- 47616_52833_47616_ 47616_52833_47616_ E_4 3_2_1 4 A_7 B_434 E_765 --A_220 B_2517 E_2068 --A_7 B_434 E_765 -- endn_52833 endc NOTPDB CPL Glutathione S-transferase (GST), C-terminal domain--Thioredoxin-like--Glutathione S-transferase (GST), C-terminal domain-- 55753_55753_55753_ 55753_55753_55753_ E_70 7_3_4 70 A_1 B_17 E_251 --A_1 B_17 E_251 --A_1 B_17 E_251 -- endn_55753_99999 47050_endc_99999_55753 INPDB RPT Actin depolymerizing proteins--Actin depolymerizing proteins--Actin depolymerizing proteins-- 57667_57667_50939_ 57667_57667_50939_ E_3 4_2_2 3 A_23 B_24 E_4849 --A_23 B_24 E_4849 --A_3 B_134 E_129 -- 57667_99999 57667_endc NOTPDB RPT C2H2 and C2HC zinc fingers--C2H2 and C2HC zinc fingers--Sialidases (neuraminidases)-- 49854_49854_57196_ 49854_49854_57196_ E_20 5_2_3 20 B_1 E_636 --B_1 E_636 --A_2 B_7 E_2358 -- endn_55486 57196_49854_99999 NOTPDB RPT Spermadhesin, CUB domain--Spermadhesin, CUB domain--EGF/Laminin-- 57630_57196_50494_ 57630_57196_50494_ E_3 3_2_1 3 E_52 --A_2 B_7 E_2358 --A_19 B_482 E_1600 -- endn_99999 endc NOTPDB CPL GLA-domain--EGF/Laminin--Trypsin-like serine proteases-- 49265_53300_49265_ 49265_53300_49265_ E_6 6_3_3 6 A_23 B_135 E_1734 --A_51 B_345 E_996 --A_23 B_135 E_1734 -- endn_53300_49265 endc_53300_49265 NOTPDB CPL Fibronectin type III--vWA-like--Fibronectin type III-- 49854_57196_57196_ 49854_57196_57196_ E_16 7_4_3 16 B_1 E_636 --A_2 B_7 E_2358 --A_2 B_7 E_2358 -- 57196_endn_49854_99999 57196_50965_99999 NOTPDB RPT Spermadhesin, CUB domain--EGF/Laminin--EGF/Laminin-- 57667_49599_57667_ 57667_49599_57667_ E_4 7_3_4 4 A_23 B_24 E_4849 --A_1 E_685 --A_23 B_24 E_4849 -- 63393_57667_99999 57667_49599_endc_99999 NOTPDB CPL C2H2 and C2HC zinc fingers--TRAF domain-like--C2H2 and C2HC zinc fingers-- 50630_56672_53098_ 50630_56672_53098_ E_69 9_6_3 69 A_15 B_69 E_1046 --A_66 B_378 E_3164 --A_290 B_2494 E_2335 -- endn_57756_47027_57774_51283_99999 46919_endc_99999 NOTPDB CPL Acid proteases--DNA/RNA polymerases--Ribonuclease H-like-- 57424_57424_82895_ 57424_57424_82895_ E_4 4_2_2 4 E_497 --E_497 --E_618 -- endn_99999 57567_82895 NOTPDB RPT LDL receptor-like module--LDL receptor-like module--TSP-1 type 1 repeat-- 52047_52047_52047_ 52047_52047_52047_ E_3 5_3_2 3 A_9 B_93 E_2576 --A_9 B_93 E_2576 --A_9 B_93 E_2576 -- endn_52058_99999 52047_99999 NOTPDB RPT RNI-like--RNI-like--RNI-like-- 53300_49265_49265_ 53300_49265_49265_ E_21 6_3_3 21 A_51 B_345 E_996 --A_23 B_135 E_1734 --A_23 B_135 E_1734 -- endn_99999_49265 endc_99999_49265 NOTPDB RPT vWA-like--Fibronectin type III--Fibronectin type III-- 52047_52047_56112_ 52047_52047_56112_ E_17 5_3_2 17 A_9 B_93 E_2576 --A_9 B_93 E_2576 --A_114 B_971 E_9319 -- endn_52058_99999 endc_99999 NOTPDB RPT RNI-like--RNI-like--Protein kinase-like (PK-like)-- 52151_53901_53901_ 52151_53901_53901_ E_3 4_2_2 3 B_266 E_103 --A_95 B_891 E_374 --A_95 B_891 E_374 -- endn_53901 53901_52151 NOTPDB RPT FabD/lysophospholipase-like--Thiolase-like--Thiolase-like-- 57667_57783_57667_ 57667_57783_57667_ E_12 6_4_2 12 A_23 B_24 E_4849 --A_193 B_620 E_393 --A_23 B_24 E_4849 -- endn_57667_57783_99999 57667_99999 NOTPDB CPL C2H2 and C2HC zinc fingers--Zinc beta-ribbon--C2H2 and C2HC zinc fingers-- 53300_49265_53300_ 53300_49265_53300_ E_4 5_3_2 4 A_51 B_345 E_996 --A_23 B_135 E_1734 --A_51 B_345 E_996 -- endn_99999_49265 endc_49265 NOTPDB CPL vWA-like--Fibronectin type III--vWA-like-- 52047_52058_52047_ 52047_52058_52047_ E_12 9_3_6 12 A_9 B_93 E_2576 --A_6 B_143 E_2568 --A_9 B_93 E_2576 -- endn_52058_99999 52047_52058_endc_52200_56112_99999 NOTPDB CPL RNI-like--L domain-like--RNI-like-- 47762_47762_47762_ 47762_47762_47762_ E_7 3_1_2 7 B_2 E_75 --B_2 E_75 --B_2 E_75 -- endn endc_99999 NOTPDB RPT PAH2 domain--PAH2 domain--PAH2 domain-- 82895_57567_57567_ 82895_57567_57567_ E_4 4_2_2 4 E_618 --E_254 --E_254 -- endn_57567 57283_82895 NOTPDB RPT TSP-1 type 1 repeat--Serine proterase inhibitors--Serine proterase inhibitors-- 63501_57424_57424_ 63501_57424_57424_ E_10 6_3_3 10 A_1 E_180 --E_497 --E_497 -- 82671_57424_99999 57424_56487_99999 NOTPDB RPT Frizzled cystein-rich domain--LDL receptor-like module--LDL receptor-like module-- 49854_57535_49854_ 49854_57535_49854_ E_34 8_4_4 34 B_1 E_636 --B_3 E_582 --B_1 E_636 -- 50249_endn_99999_57535 endc_49854_99999_57535 NOTPDB CPL Spermadhesin, CUB domain--Complement control module/SCR domain--Spermadhesin, CUB domain-- 52047_52058_56112_ 52047_52058_56112_ E_7 5_3_2 7 A_9 B_93 E_2576 --A_6 B_143 E_2568 --A_114 B_971 E_9319 -- endn_52058_99999 endc_99999 NOTPDB CPL RNI-like--L domain-like--Protein kinase-like (PK-like)-- 49417_81296_48403_ 49417_81296_48403_ E_2 3_1_2 2 A_10 B_39 E_458 --A_40 B_404 E_1207 --A_4 B_168 E_2348 -- endn endc_99999 NOTPDB CPL p53-like transcription factors--E set domains--Ankyrin repeat-- 48726_48726_49265_ 48726_48726_49265_ E_292 9_4_5 292 A_14 B_78 E_4071 --A_14 B_78 E_4071 --A_23 B_135 E_1734 -- endn_48726_99999_49265 48726_endc_56112_49265_99999 NOTPDB RPT Immunoglobulin--Immunoglobulin--Fibronectin type III-- 49562_49562_48350_ 49562_49562_48350_ E_2 4_2_2 2 B_12 E_1627 --B_12 E_1627 --B_8 E_786 -- endn_99999 50729_99999 NOTPDB RPT C2 domain (Calcium/lipid-binding domain, CaLB)--C2 domain (Calcium/lipid-binding domain, CaLB)--GTPase activation domain, GAP-- 55550_55550_52799_ 55550_55550_52799_ E_23 6_3_3 23 A_4 B_15 E_910 --A_4 B_15 E_910 --A_16 B_112 E_1201 -- endn_55387_99999 55387_endc_99999 INPDB RPT SH2 domain--SH2 domain--(Phosphotyrosine protein) phosphatases II-- 49854_49854_49854_ 49854_49854_49854_ E_35 11_5_6 35 B_1 E_636 --B_1 E_636 --B_1 E_636 -- 57196_57424_endn_49854_99999 57424_56487_endc_53300_49854_99999 NOTPDB RPT Spermadhesin, CUB domain--Spermadhesin, CUB domain--Spermadhesin, CUB domain-- 49854_49785_49785_ 49854_49785_49785_ E_22 4_2_2 22 B_1 E_636 --A_10 B_366 E_724 --A_10 B_366 E_724 -- endn_49854 endc_99999 NOTPDB RPT Spermadhesin, CUB domain--Galactose-binding domain-like--Galactose-binding domain-like-- 57756_50630_50630_ 57756_50630_50630_ E_5 4_2_2 5 A_11 B_19 E_1238 --A_15 B_69 E_1046 --A_15 B_69 E_1046 -- endn_99999 56672_endc NOTPDB RPT Retrovirus zinc finger-like domains--Acid proteases--Acid proteases-- 48695_57716_57716_ 48695_57716_57716_ E_25 7_3_4 25 A_18 B_378 E_163 --A_72 B_426 E_2067 --A_72 B_426 E_2067 -- endn_57716_50156 57716_endc_46689_99999 NOTPDB RPT Multiheme cytochromes--Glucocorticoid receptor-like (DNA-binding domain)--Glucocorticoid receptor-like (DNA-binding domain)-- 57440_57440_50494_ 57440_57440_50494_ E_27 6_5_1 27 A_6 B_6 E_228 --A_6 B_6 E_228 --A_19 B_482 E_1600 -- endn_57440_57603_99999_82895 endc NOTPDB RPT Kringle-like--Kringle-like--Trypsin-like serine proteases-- 69179_69179_69179_ 69179_69179_69179_ E_67 4_2_2 67 A_2 B_11 E_172 --A_2 B_11 E_172 --A_2 B_11 E_172 -- endn_69318 endc_99999 INPDB RPT Integrin domains--Integrin domains--Integrin domains-- 49854_57196_49854_ 49854_57196_49854_ E_43 8_3_5 43 B_1 E_636 --A_2 B_7 E_2358 --B_1 E_636 -- endn_49854_99999 57196_endc_49854_99999_57535 NOTPDB CPL Spermadhesin, CUB domain--EGF/Laminin--Spermadhesin, CUB domain-- 57196_63825_57196_ 57196_63825_57196_ E_53 13_6_7 53 A_2 B_7 E_2358 --A_7 B_35 E_205 --A_2 B_7 E_2358 -- 57196_57424_75011_63825_99999_57567 57196_50969_57424_75011_63825_endc_99999 INPDB CPL EGF/Laminin--Low density lipoprotein (LDL) receptor YWTD domain--EGF/Laminin-- 50729_81837_50978_ 50729_81837_50978_ E_43 5_2_3 43 A_14 B_44 E_3057 --B_1 E_90 --A_7 B_101 E_3576 -- endn_99999 57903_endc_99999 NOTPDB CPL PH domain-like--BEACH domain--WD40-repeat-- 49562_57889_57889_ 49562_57889_57889_ E_24 4_2_2 24 B_12 E_1627 --A_7 B_6 E_663 --A_7 B_6 E_663 -- endn_99999 endc_99999 NOTPDB RPT C2 domain (Calcium/lipid-binding domain, CaLB)--Cysteine-rich domain--Cysteine-rich domain-- 52540_52047_52075_ 52540_52047_52075_ E_2 4_2_2 2 A_2129 B_14320 E_12913 --A_9 B_93 E_2576 --B_3 E_104 -- endn_52200 52200_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--RNI-like--Outer arm dynein light chain 1-- 48726_57667_57667_ 48726_57667_57667_ E_40 6_3_3 40 A_14 B_78 E_4071 --A_23 B_24 E_4849 --A_23 B_24 E_4849 -- endn_57667_99999 57667_endc_99999 NOTPDB RPT Immunoglobulin--C2H2 and C2HC zinc fingers--C2H2 and C2HC zinc fingers-- 56436_57196_57196_ 56436_57196_57196_ E_3 3_1_2 3 A_2 B_62 E_1409 --A_2 B_7 E_2358 --A_2 B_7 E_2358 -- endn 57196_endc NOTPDB RPT C-type lectin-like--EGF/Laminin--EGF/Laminin-- 50911_57440_50911_ 50911_57440_50911_ E_5 4_2_2 5 E_86 --A_6 B_6 E_228 --E_86 -- 99999_50911 99999_50911 NOTPDB CPL Mannose 6-phosphate receptor domain--Kringle-like--Mannose 6-phosphate receptor domain-- 49265_49265_57603_ 49265_49265_57603_ E_2 4_2_2 2 A_23 B_135 E_1734 --A_23 B_135 E_1734 --B_1 E_56 -- endn_49265 57603_endc NOTPDB RPT Fibronectin type III--Fibronectin type III--Fibronectin type I module-- 47923_47923_52821_ 47923_47923_52821_ E_16 5_3_2 16 A_1 B_2 E_469 --A_1 B_2 E_469 --A_39 B_452 E_298 -- endn_56112_99999 endc_99999 NOTPDB RPT Ypt/Rab-GAP domain of gyp1p--Ypt/Rab-GAP domain of gyp1p--Rhodanese/Cell cycle control phosphatase-- 54768_54768_54768_ 54768_54768_54768_ E_30 7_4_3 30 A_18 B_198 E_397 --A_18 B_198 E_397 --A_18 B_198 E_397 -- endn_54768_99999_56112 54768_endc_99999 NOTPDB RPT dsRNA-binding domain-like--dsRNA-binding domain-like--dsRNA-binding domain-like-- 49899_57196_49899_ 49899_57196_49899_ E_23 11_7_4 23 A_22 B_208 E_1314 --A_2 B_7 E_2358 --A_22 B_208 E_1314 -- 57196_endn_49785_49899_57362_56496_99999 57196_49899_endc_99999 NOTPDB CPL Concanavalin A-like lectins/glucanases--EGF/Laminin--Concanavalin A-like lectins/glucanases-- 55550_57889_48350_ 55550_57889_48350_ E_8 3_2_1 8 A_4 B_15 E_910 --A_7 B_6 E_663 --B_8 E_786 -- endn_99999 endc NOTPDB CPL SH2 domain--Cysteine-rich domain--GTPase activation domain, GAP-- 52113_52540_52540_ 52113_52540_52540_ E_2 3_2_1 2 A_1 B_117 E_366 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn_99999 endc NOTPDB RPT BRCT domain--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 54236_54236_54236_ 54236_54236_54236_ E_14 8_4_4 14 A_18 B_81 E_1815 --A_18 B_81 E_1815 --A_18 B_81 E_1815 -- endn_54236_49354_99999 54292_54236_endc_99999 NOTPDB RPT Ubiquitin-like--Ubiquitin-like--Ubiquitin-like-- 57667_54001_57667_ 57667_54001_57667_ E_2 4_2_2 2 A_23 B_24 E_4849 --A_60 B_262 E_1838 --A_23 B_24 E_4849 -- endn_57667 57667_endc NOTPDB CPL C2H2 and C2HC zinc fingers--Cysteine proteinases--C2H2 and C2HC zinc fingers-- 48371_56112_64268_ 48371_56112_64268_ E_2 4_2_2 2 A_73 B_255 E_3951 --A_114 B_971 E_9319 --B_5 E_392 -- endn_49562 49562_99999 NOTPDB CPL ARM repeat--Protein kinase-like (PK-like)--PX domain-- 63825_57196_50969_ 63825_57196_50969_ E_2 4_2_2 2 A_7 B_35 E_205 --A_2 B_7 E_2358 --A_24 B_218 E_336 -- 57196_endn 63825_endc NOTPDB CPL Low density lipoprotein (LDL) receptor YWTD domain--EGF/Laminin--YVTN repeat-like/Quinoprotein amine dehydrogenase-- 48726_49265_56112_ 48726_49265_56112_ E_27 6_3_3 27 A_14 B_78 E_4071 --A_23 B_135 E_1734 --A_114 B_971 E_9319 -- endn_48726_99999 48726_endc_99999 NOTPDB CPL Immunoglobulin--Fibronectin type III--Protein kinase-like (PK-like)-- 49265_48726_48726_ 49265_48726_48726_ E_67 9_4_5 67 A_23 B_135 E_1734 --A_14 B_78 E_4071 --A_14 B_78 E_4071 -- endn_48726_99999_49265 48726_endc_56112_99999_49265 NOTPDB RPT Fibronectin type III--Immunoglobulin--Immunoglobulin-- 48065_50729_46785_ 48065_50729_46785_ E_5 4_2_2 5 A_3 B_7 E_597 --A_14 B_44 E_3057 --A_1241 B_7979 E_2143 -- endn_99999 endc_46785 NOTPDB CPL DBL homology domain (DH-domain)--PH domain-like--"Winged helix" DNA-binding domain-- 57196_57196_50494_ 57196_57196_50494_ E_17 4_3_1 17 A_2 B_7 E_2358 --A_2 B_7 E_2358 --A_19 B_482 E_1600 -- endn_57630_99999 endc NOTPDB RPT EGF/Laminin--EGF/Laminin--Trypsin-like serine proteases-- 57256_57362_57256_ 57256_57362_57256_ E_2 4_2_2 2 E_63 --A_1 B_1 E_226 --E_63 -- endn_99999 57256_99999 NOTPDB CPL Elafin-like--BPTI-like--Elafin-like-- 51695_55550_55550_ 51695_55550_55550_ E_15 5_2_3 15 A_5 B_143 E_312 --A_4 B_15 E_910 --A_4 B_15 E_910 -- 47473_99999 50044_endc_99999 NOTPDB RPT Phosphatidylinositol-specific phospholipase C (PI-PLC)--SH2 domain--SH2 domain-- 81301_81631_55003_ 81301_81631_55003_ E_32 4_2_2 32 A_169 B_325 E_254 --B_2 E_37 --A_5 B_1 E_78 -- endn_99999 endc_99999 INPDB CPL Nucleotidyltransferase--Poly(A) polymerase, middle domain--Poly(A) polymerase, C-terminal domain-- 47459_55785_55785_ 47459_55785_55785_ E_26 5_2_3 26 A_3 B_10 E_1147 --A_168 B_1284 E_394 --A_168 B_1284 E_394 -- endn_99999 49785_endc_99999 NOTPDB RPT Helix-loop-helix DNA-binding domain--PYP-like sensor domain (PAS domain)--PYP-like sensor domain (PAS domain)-- 50729_47473_47473_ 50729_47473_47473_ E_3 4_2_2 3 A_14 B_44 E_3057 --A_51 B_190 E_2808 --A_51 B_190 E_2808 -- endn_99999 51695_99999 NOTPDB RPT PH domain-like--EF-hand--EF-hand-- 57850_57667_57667_ 57850_57667_57667_ E_4 4_2_2 4 A_19 B_52 E_3605 --A_23 B_24 E_4849 --A_23 B_24 E_4849 -- 57850_99999 57667_99999 NOTPDB RPT RING finger domain, C3HC4--C2H2 and C2HC zinc fingers--C2H2 and C2HC zinc fingers-- 52374_55785_55785_ 52374_55785_55785_ E_7 4_2_2 7 A_247 B_1540 E_642 --A_168 B_1284 E_394 --A_168 B_1284 E_394 -- endn_99999 48452_99999 NOTPDB RPT Nucleotidylyl transferase--PYP-like sensor domain (PAS domain)--PYP-like sensor domain (PAS domain)-- 49854_57184_57196_ 49854_57184_57196_ E_3 3_1_2 3 B_1 E_636 --B_4 E_859 --A_2 B_7 E_2358 -- endn 57196_99999 NOTPDB CPL Spermadhesin, CUB domain--Growth factor receptor domain--EGF/Laminin-- 47220_52540_52540_ 47220_52540_52540_ E_2 3_1_2 2 A_6 B_4 E_147 --A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- endn 51101_endc NOTPDB RPT alpha-catenin/vinculin--P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 56436_49854_49854_ 56436_49854_49854_ E_18 4_2_2 18 A_2 B_62 E_1409 --B_1 E_636 --B_1 E_636 -- endn_56436 endc_99999 NOTPDB RPT C-type lectin-like--Spermadhesin, CUB domain--Spermadhesin, CUB domain-- 52833_54919_54919_ 52833_54919_54919_ E_4 4_2_2 4 A_220 B_2517 E_2068 --A_22 B_92 E_118 --A_22 B_92 E_118 -- endn_56112 endc_54919 NOTPDB RPT Thioredoxin-like--Nucleoside diphosphate kinases--Nucleoside diphosphate kinases-- 57903_57903_82199_ 57903_57903_82199_ E_2 4_2_2 2 A_56 B_38 E_1435 --A_56 B_38 E_1435 --A_2 B_29 E_692 -- endn_99999 endc_99999 NOTPDB RPT FYVE/PHD zinc finger--FYVE/PHD zinc finger--SET domain-- 49785_57184_49265_ 49785_57184_49265_ E_23 6_3_3 23 A_10 B_366 E_724 --B_4 E_859 --A_23 B_135 E_1734 -- endn_57535_99999 endc_99999_49265 NOTPDB CPL Galactose-binding domain-like--Growth factor receptor domain--Fibronectin type III-- 57586_49265_49265_ 57586_49265_49265_ E_48 6_4_2 48 A_15 B_23 E_359 --A_23 B_135 E_1734 --A_23 B_135 E_1734 -- endn_57586_57184_99999 56112_99999 NOTPDB RPT TNF receptor-like--Fibronectin type III--Fibronectin type III-- 57667_57667_57783_ 57667_57667_57783_ E_8 4_2_2 8 A_23 B_24 E_4849 --A_23 B_24 E_4849 --A_193 B_620 E_393 -- 57667_99999 57667_endc NOTPDB RPT C2H2 and C2HC zinc fingers--C2H2 and C2HC zinc fingers--Zinc beta-ribbon-- 69179_57196_57196_ 69179_57196_57196_ E_27 5_2_3 27 A_2 B_11 E_172 --A_2 B_7 E_2358 --A_2 B_7 E_2358 -- endn_53300 57196_69687_99999 INPDB RPT Integrin domains--EGF/Laminin--EGF/Laminin-- 82895_82895_82895_ 82895_82895_82895_ E_248 17_9_8 248 E_618 --E_618 --E_618 -- endn_50494_48726_57492_57283_49482_49854_82895_99999 57196_48726_57184_57362_endc_57567_99999_82895 NOTPDB RPT TSP-1 type 1 repeat--TSP-1 type 1 repeat--TSP-1 type 1 repeat-- 49265_49265_53300_ 49265_49265_53300_ E_9 6_2_4 9 A_23 B_135 E_1734 --A_23 B_135 E_1734 --A_51 B_345 E_996 -- 57610_49265 49899_99999_49265_57567 NOTPDB RPT Fibronectin type III--Fibronectin type III--vWA-like-- 57196_57196_48726_ 57196_57196_48726_ E_10 5_3_2 10 A_2 B_7 E_2358 --A_2 B_7 E_2358 --A_14 B_78 E_4071 -- 57196_48726_99999 48726_99999 NOTPDB RPT EGF/Laminin--EGF/Laminin--Immunoglobulin-- 50939_57667_57667_ 50939_57667_57667_ E_7 5_3_2 7 A_3 B_134 E_129 --A_23 B_24 E_4849 --A_23 B_24 E_4849 -- endn_57667_99999 57667_99999 NOTPDB RPT Sialidases (neuraminidases)--C2H2 and C2HC zinc fingers--C2H2 and C2HC zinc fingers-- 50044_55550_56112_ 50044_55550_56112_ E_150 5_3_2 150 A_2 B_84 E_1671 --A_4 B_15 E_910 --A_114 B_971 E_9319 -- endn_50729_99999 endc_99999 INPDB CPL SH3-domain--SH2 domain--Protein kinase-like (PK-like)-- 52833_47616_47616_ 52833_47616_47616_ E_2 3_1_2 2 A_220 B_2517 E_2068 --A_7 B_434 E_765 --A_7 B_434 E_765 -- endn endc_99999 NOTPDB RPT Thioredoxin-like--Glutathione S-transferase (GST), C-terminal domain--Glutathione S-transferase (GST), C-terminal domain-- 81324_81324_47473_ 81324_81324_47473_ E_6 3_2_1 6 A_34 B_130 E_1059 --A_34 B_130 E_1059 --A_51 B_190 E_2808 -- endn_99999 endc NOTPDB RPT Voltage-gated potassium channels--Voltage-gated potassium channels--EF-hand-- 48726_48726_50969_ 48726_48726_50969_ E_10 5_2_3 10 A_14 B_78 E_4071 --A_14 B_78 E_4071 --A_24 B_218 E_336 -- 47473_99999 endc_50998_99999 NOTPDB RPT Immunoglobulin--Immunoglobulin--YVTN repeat-like/Quinoprotein amine dehydrogenase-- 49854_57535_57535_ 49854_57535_57535_ E_37 7_4_3 37 B_1 E_636 --B_3 E_582 --B_3 E_582 -- 57196_endn_49854_57535 50494_99999_57535 NOTPDB RPT Spermadhesin, CUB domain--Complement control module/SCR domain--Complement control module/SCR domain-- 57586_57586_49265_ 57586_57586_49265_ E_31 6_3_3 31 A_15 B_23 E_359 --A_15 B_23 E_359 --A_23 B_135 E_1734 -- endn_49785_99999 endc_99999_49265 NOTPDB RPT TNF receptor-like--TNF receptor-like--Fibronectin type III-- 53254_48726_48726_ 53254_48726_48726_ E_2 3_1_2 2 A_18 B_402 E_440 --A_14 B_78 E_4071 --A_14 B_78 E_4071 -- endn endc_99999 NOTPDB RPT Phosphoglycerate mutase-like--Immunoglobulin--Immunoglobulin-- 52047_52047_52058_ 52047_52047_52058_ E_7 5_3_2 7 A_9 B_93 E_2576 --A_9 B_93 E_2576 --A_6 B_143 E_2568 -- endn_52075_99999 52075_99999 NOTPDB RPT RNI-like--RNI-like--L domain-like-- 53383_48452_48452_ 53383_48452_48452_ E_2 3_1_2 2 A_367 B_2974 E_1139 --A_146 B_1937 E_3442 --A_146 B_1937 E_3442 -- endn 48452_endc NOTPDB RPT PLP-dependent transferases--TPR-like--TPR-like-- 57424_49854_57424_ 57424_49854_57424_ E_12 4_2_2 12 E_497 --B_1 E_636 --E_497 -- 57424_49854 63501_57424 NOTPDB CPL LDL receptor-like module--Spermadhesin, CUB domain--LDL receptor-like module-- 51045_51045_51045_ 51045_51045_51045_ E_15 4_2_2 15 B_5 E_413 --B_5 E_413 --B_5 E_413 -- 51045_99999 51045_56204 NOTPDB RPT WW domain--WW domain--WW domain-- 53822_56112_55073_ 53822_56112_55073_ E_11 4_2_2 11 A_49 B_1285 E_794 --A_114 B_971 E_9319 --A_5 B_639 E_400 -- endn_99999 endc_99999 NOTPDB CPL Periplasmic binding protein-like I--Protein kinase-like (PK-like)--Adenylyl and guanylyl cyclase catalytic domain-- 57424_57424_50494_ 57424_57424_50494_ E_17 5_4_1 17 E_497 --E_497 --A_19 B_482 E_1600 -- endn_57424_56487_99999 endc NOTPDB RPT LDL receptor-like module--LDL receptor-like module--Trypsin-like serine proteases-- 51045_51045_50156_ 51045_51045_50156_ E_8 5_2_3 8 B_5 E_413 --B_5 E_413 --A_28 B_534 E_1380 -- 52540_99999 54236_50156_99999 NOTPDB RPT WW domain--WW domain--PDZ domain-like-- 50156_50156_50044_ 50156_50156_50044_ E_9 4_2_2 9 A_28 B_534 E_1380 --A_28 B_534 E_1380 --A_2 B_84 E_1671 -- 50156_99999 52540_99999 NOTPDB RPT PDZ domain-like--PDZ domain-like--SH3-domain-- 49854_49854_57535_ 49854_49854_57535_ E_3 4_2_2 3 B_1 E_636 --B_1 E_636 --B_3 E_582 -- endn_57535 endc_57535 NOTPDB RPT Spermadhesin, CUB domain--Spermadhesin, CUB domain--Complement control module/SCR domain-- 54236_48371_50729_ 54236_48371_50729_ E_3 3_1_2 3 A_18 B_81 E_1815 --A_73 B_255 E_3951 --A_14 B_44 E_3057 -- endn endc_99999 NOTPDB CPL Ubiquitin-like--ARM repeat--PH domain-like-- 63748_82199_57903_ 63748_82199_57903_ E_14 4_2_2 14 A_4 B_5 E_441 --A_2 B_29 E_692 --A_56 B_38 E_1435 -- 57903_99999 endc_99999 NOTPDB CPL Tudor/PWWP--SET domain--FYVE/PHD zinc finger-- 52047_52058_52058_ 52047_52058_52058_ E_3 5_2_3 3 A_9 B_93 E_2576 --A_6 B_143 E_2568 --A_6 B_143 E_2568 -- endn_52058 52047_52058_56112 NOTPDB RPT RNI-like--L domain-like--L domain-like-- 49854_57196_57535_ 49854_57196_57535_ E_4 4_2_2 4 B_1 E_636 --A_2 B_7 E_2358 --B_3 E_582 -- 57716_99999 99999_57535 NOTPDB CPL Spermadhesin, CUB domain--EGF/Laminin--Complement control module/SCR domain-- 48726_48726_82895_ 48726_48726_82895_ E_21 5_3_2 21 A_14 B_78 E_4071 --A_14 B_78 E_4071 --E_618 -- endn_48726_99999 endc_82895 NOTPDB RPT Immunoglobulin--Immunoglobulin--TSP-1 type 1 repeat-- 57863_50729_50729_ 57863_50729_50729_ E_15 3_1_2 15 B_10 E_253 --A_14 B_44 E_3057 --A_14 B_44 E_3057 -- endn endc_99999 NOTPDB RPT Pyk2-associated protein beta ARF-GAP domain--PH domain-like--PH domain-like-- 52058_52047_52047_ 52058_52047_52047_ E_7 7_3_4 7 A_6 B_143 E_2568 --A_9 B_93 E_2576 --A_9 B_93 E_2576 -- 52047_endn_99999 52047_endc_56112_99999 NOTPDB RPT L domain-like--RNI-like--RNI-like-- 52317_81383_52047_ 52317_81383_52047_ E_2 4_2_2 2 A_204 B_1244 E_262 --B_8 E_2068 --A_9 B_93 E_2576 -- endn_99999 55200_endc NOTPDB CPL Class I glutamine amidotransferase-like--F-box domain--RNI-like-- 81321_81321_81321_ 81321_81321_81321_ E_3 3_1_2 3 A_7 B_20 E_8234 --A_7 B_20 E_8234 --A_7 B_20 E_8234 -- endn endc_99999 NOTPDB RPT Family A G protein-coupled receptor-like--Family A G protein-coupled receptor-like--Family A G protein-coupled receptor-like-- 52058_52047_56112_ 52058_52047_56112_ E_18 5_3_2 18 A_6 B_143 E_2568 --A_9 B_93 E_2576 --A_114 B_971 E_9319 -- 52047_52058_99999 endc_99999 NOTPDB CPL L domain-like--RNI-like--Protein kinase-like (PK-like)-- 57414_57414_57414_ 57414_57414_57414_ E_26 6_3_3 26 B_5 E_136 --B_5 E_136 --B_5 E_136 -- endn_57414_99999 50494_57414_99999 NOTPDB RPT Hairpin loop containing domain-like--Hairpin loop containing domain-like--Hairpin loop containing domain-like-- 48239_48239_48576_ 48239_48239_48576_ E_9 5_2_3 9 A_29 B_94 E_322 --A_29 B_94 E_322 --A_32 B_270 E_227 -- 48239_endn endc_99999_48576 NOTPDB RPT Terpenoid cylases/Protein prenyltransferases--Terpenoid cylases/Protein prenyltransferases--Terpenoid synthases-- 56968_48431_56968_ 56968_48431_56968_ E_26 5_2_3 26 A_1 B_2 E_55 --A_5 B_28 E_87 --A_1 B_2 E_55 -- endn_99999 56968_endc_99999 INPDB CPL Lipovitellin-phosvitin complex; beta-sheet shell regions--Lipovitellin-phosvitin complex, superhelical domain--Lipovitellin-phosvitin complex; beta-sheet shell regions-- 57467_56487_57424_ 57467_56487_57424_ E_8 4_2_2 8 A_2 B_8 E_358 --B_1 E_193 --E_497 -- endn_99999 57424_50494 NOTPDB CPL Ovomucoid/PCI-1 like inhibitors--Scavenger receptor cysteine-rich (SRCR) domain--LDL receptor-like module-- 48726_57424_57424_ 48726_57424_57424_ E_9 5_2_3 9 A_14 B_78 E_4071 --E_497 --E_497 -- 57424_endn 57424_endc_99999 NOTPDB RPT Immunoglobulin--LDL receptor-like module--LDL receptor-like module-- 52058_57184_57184_ 52058_57184_57184_ E_7 4_2_2 7 A_6 B_143 E_2568 --B_4 E_859 --B_4 E_859 -- endn_57184 56112_99999 NOTPDB RPT L domain-like--Growth factor receptor domain--Growth factor receptor domain-- 52058_52058_52047_ 52058_52058_52047_ E_22 8_4_4 22 A_6 B_143 E_2568 --A_6 B_143 E_2568 --A_9 B_93 E_2576 -- 52047_endn_52058_99999 52058_endc_99999_56112 NOTPDB RPT L domain-like--L domain-like--RNI-like-- 49854_49854_49785_ 49854_49854_49785_ E_22 4_2_2 22 B_1 E_636 --B_1 E_636 --A_10 B_366 E_724 -- endn_99999 49785_endc NOTPDB RPT Spermadhesin, CUB domain--Spermadhesin, CUB domain--Galactose-binding domain-like-- 48065_50729_48726_ 48065_50729_48726_ E_3 4_2_2 3 A_3 B_7 E_597 --A_14 B_44 E_3057 --A_14 B_78 E_4071 -- 50044_99999 48726_endc NOTPDB CPL DBL homology domain (DH-domain)--PH domain-like--Immunoglobulin-- 50044_48350_55550_ 50044_48350_55550_ E_8 3_1_2 8 A_2 B_84 E_1671 --B_8 E_786 --A_4 B_15 E_910 -- endn endc_99999 NOTPDB CPL SH3-domain--GTPase activation domain, GAP--SH2 domain-- 52058_52058_56112_ 52058_52058_56112_ E_9 4_3_1 9 A_6 B_143 E_2568 --A_6 B_143 E_2568 --A_114 B_971 E_9319 -- 52047_52058_99999 endc NOTPDB RPT L domain-like--L domain-like--Protein kinase-like (PK-like)-- 57196_57424_57424_ 57196_57424_57424_ E_11 9_6_3 11 A_2 B_7 E_2358 --E_497 --E_497 -- endn_57424_63825_69304_99999_63829 57424_endc_99999 NOTPDB RPT EGF/Laminin--LDL receptor-like module--LDL receptor-like module-- 50494_50494_50494_ 50494_50494_50494_ E_6 5_3_2 6 A_19 B_482 E_1600 --A_19 B_482 E_1600 --A_19 B_482 E_1600 -- endn_55676_99999 endc_99999 NOTPDB RPT Trypsin-like serine proteases--Trypsin-like serine proteases--Trypsin-like serine proteases-- 56112_56112_56112_ 56112_56112_56112_ E_3 3_2_1 3 A_114 B_971 E_9319 --A_114 B_971 E_9319 --A_114 B_971 E_9319 -- endn_99999 endc NOTPDB RPT Protein kinase-like (PK-like)--Protein kinase-like (PK-like)--Protein kinase-like (PK-like)-- 48726_56436_56436_ 48726_56436_56436_ E_41 7_4_3 41 A_14 B_78 E_4071 --A_2 B_62 E_1409 --A_2 B_62 E_1409 -- endn_49785_57184_99999 57196_endc_99999 NOTPDB RPT Immunoglobulin--C-type lectin-like--C-type lectin-like-- 49785_53187_49464_ 49785_53187_49464_ E_12 4_2_2 12 A_10 B_366 E_724 --A_105 B_1042 E_648 --A_30 B_195 E_96 -- endn_99999 endc_99999 NOTPDB CPL Galactose-binding domain-like--Zn-dependent exopeptidases--Carboxypeptidase D, a regulatory domain-- 55797_55797_55797_ 55797_55797_55797_ E_2 3_1_2 2 A_2 B_67 E_342 --A_2 B_67 E_342 --A_2 B_67 E_342 -- endn endc_99999 NOTPDB RPT PR-1-like--PR-1-like--PR-1-like-- 57667_57667_49599_ 57667_57667_49599_ E_4 5_2_3 4 A_23 B_24 E_4849 --A_23 B_24 E_4849 --A_1 E_685 -- endn_57667 57667_endc_99999 NOTPDB RPT C2H2 and C2HC zinc fingers--C2H2 and C2HC zinc fingers--TRAF domain-like-- 69179_69318_69179_ 69179_69318_69179_ E_2 3_1_2 2 A_2 B_11 E_172 --A_6 B_79 E_181 --A_2 B_11 E_172 -- endn 69179_99999 NOTPDB CPL Integrin domains--Integrin alpha N-terminal domain--Integrin domains--