Total: 593 A 1301 B 1874 E Set overlap: AB 137 0.0578547297297297 ABC 365 0.154138513513514 AC 50 0.0211148648648649 BC 483 0.203969594594595 A 41 0.0173141891891892 B 316 0.133445945945946 C 976 0.412162162162162 AB 137 75500_75500_ 75500_75500_ A_2 B_2 4_2_2 4 A_8 B_39 E_1 --A_8 B_39 E_1 -- 51735_99999 endc_75500 NOTPDB RPT Putative transcriptional regulator TM1602, C-terminal domain--Putative transcriptional regulator TM1602, C-terminal domain-- 54862_54292_ 54862_54292_ A_3 B_2 5_1_4 5 A_411 B_743 E_103 --A_44 B_565 E_187 -- endn 53706_51366_51412_99999 NOTPDB CPL 4Fe-4S ferredoxins--2Fe-2S ferredoxin-like-- 54975_57783_ 54975_57783_ A_4 B_10 4_2_2 14 A_27 B_115 E_43 --A_193 B_620 E_393 -- endn_99999 63393_55821 NOTPDB CPL Acylphosphatase-like--Zinc beta-ribbon-- 56784_51604_ 56784_51604_ A_3 B_1 3_2_1 4 A_230 B_1745 E_1267 --A_64 B_382 E_137 -- endn_99999 endc NOTPDB CPL HAD-like--Enolase C-terminal domain-like-- 56014_54862_ 56014_54862_ A_5 B_6 4_2_2 11 A_25 B_194 E_20 --A_411 B_743 E_103 -- 55124_99999 endc_99999 NOTPDB CPL Sulfite reductase hemoprotein (SiRHP), domains 2 and 4--4Fe-4S ferredoxins-- 52518_53323_ 52518_53323_ A_4 B_16 4_2_2 20 A_239 B_1128 E_328 --A_72 B_87 E_1 -- endn_52922 endc_99999 NOTPDB CPL Thiamin diphosphate-binding fold (THDP-binding)--Pyruvate-ferredoxin oxidoreductase, PFOR, domain III-- 51735_51569_ 51735_51569_ A_1 B_1 3_2_1 2 A_993 B_8798 E_3827 --A_136 B_1089 E_356 -- endn_52507 endc NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Aldolase-- 46785_51395_ 46785_51395_ A_1 B_1 3_1_2 2 A_1241 B_7979 E_2143 --A_111 B_849 E_252 -- endn endc_46785 NOTPDB CPL "Winged helix" DNA-binding domain--FMN-linked oxidoreductases-- 51445_54001_ 51445_54001_ A_2 B_1 3_2_1 3 A_89 B_1646 E_1474 --A_60 B_262 E_1838 -- endn_99999 endc NOTPDB CPL (Trans)glycosidases--Cysteine proteinases-- 46785_46894_ 46785_46894_ A_1 B_2 3_1_2 3 A_1241 B_7979 E_2143 --A_87 B_1032 E_48 -- endn endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--C-terminal effector domain of the bipartite response regulators-- 52440_51735_ 52440_51735_ A_1 B_1 4_2_2 2 A_71 B_698 E_210 --A_993 B_8798 E_3827 -- endn_52507 51735_endc NOTPDB CPL PreATP-grasp domain--NAD(P)-binding Rossmann-fold domains-- 55021_52540_ 55021_52540_ A_1 B_4 4_2_2 5 A_109 B_662 E_147 --A_2129 B_14320 E_12913 -- endn_99999 endc_99999 NOTPDB CPL Regulatory domain in the aminoacid metabolism--P-loop containing nucleotide triphosphate hydrolases-- 46785_54236_ 46785_54236_ A_3 B_1 5_2_3 4 A_1241 B_7979 E_2143 --A_18 B_81 E_1815 -- endn_99999 53335_46579_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Ubiquitin-like-- 53187_51230_ 53187_51230_ A_1 B_8 3_1_2 9 A_105 B_1042 E_648 --A_35 B_1330 E_195 -- endn endc_99999 NOTPDB CPL Zn-dependent exopeptidases--Single hybrid motif-- 51735_53623_ 51735_53623_ A_2 B_2 3_1_2 4 A_993 B_8798 E_3827 --A_21 B_536 E_49 -- endn 51735_53244 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--MurD-like peptide ligases, catalytic domain-- 52540_52440_ 52540_52440_ A_1 B_9 7_4_3 10 A_2129 B_14320 E_12913 --A_71 B_698 E_210 -- 52540_53795_endn_99999 52540_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--PreATP-grasp domain-- 51713_49417_ 51713_49417_ A_10 B_17 3_1_2 27 A_85 B_280 E_82 --A_10 B_39 E_458 -- endn endc_99999 NOTPDB CPL tRNA-guanine transglycosylase--p53-like transcription factors-- 51182_51215_ 51182_51215_ A_1 B_3 3_1_2 4 A_107 B_1063 E_385 --A_1 B_240 E_12 -- endn endc_99999 NOTPDB CPL RmlC-like cupins--Regulatory protein AraC-- 46785_48695_ 46785_48695_ A_1 B_3 3_2_1 4 A_1241 B_7979 E_2143 --A_18 B_378 E_163 -- endn_99999 endc NOTPDB CPL "Winged helix" DNA-binding domain--Multiheme cytochromes-- 53271_51735_ 53271_51735_ A_1 B_1 3_2_1 2 A_132 B_838 E_254 --A_993 B_8798 E_3827 -- endn_52507 endc NOTPDB CPL PRTase-like--NAD(P)-binding Rossmann-fold domains-- 81442_81452_ 81442_81452_ A_4 B_3 3_2_1 7 A_20 B_160 E_20 --A_6 B_108 E_7 -- endn_99999 endc NOTPDB CPL Cytochrome c oxidase subunit I-like--Cytochrome c oxidase subunit III-like-- 49384_51445_ 49384_51445_ A_1 B_4 3_2_1 5 A_6 B_62 E_34 --A_89 B_1646 E_1474 -- endn_51445 endc NOTPDB CPL Carbohydrate-binding domain--(Trans)glycosidases-- 52317_52540_ 52317_52540_ A_4 B_3 3_2_1 7 A_204 B_1244 E_262 --A_2129 B_14320 E_12913 -- 52540_endn endc NOTPDB CPL Class I glutamine amidotransferase-like--P-loop containing nucleotide triphosphate hydrolases-- 46894_46689_ 46894_46689_ A_2 B_1 5_2_3 3 A_87 B_1032 E_48 --A_246 B_4125 E_4002 -- endn_99999 endc_46785_99999 NOTPDB CPL C-terminal effector domain of the bipartite response regulators--Homeodomain-like-- 50969_53474_ 50969_53474_ A_2 B_2 4_3_1 4 A_24 B_218 E_336 --A_141 B_2949 E_2909 -- 50969_endn_99999 endc NOTPDB CPL YVTN repeat-like/Quinoprotein amine dehydrogenase--alpha/beta-Hydrolases-- 64307_75169_ 64307_75169_ A_4 B_7 3_2_1 11 A_42 B_101 E_5 --A_72 B_102 E_2 -- endn_99999 endc NOTPDB CPL SirA-like--YchN-like-- 53850_55785_ 53850_55785_ A_1 B_15 6_2_4 16 A_257 B_5627 E_740 --A_168 B_1284 E_394 -- endn_53850 55781_47384_55785_99999 NOTPDB CPL Periplasmic binding protein-like II--PYP-like sensor domain (PAS domain)-- 50952_49299_ 50952_49299_ A_1 B_2 3_1_2 3 A_7 B_167 E_70 --A_103 B_31 E_55 -- endn 49299_99999 NOTPDB CPL Soluble quinoprotein glucose dehydrogenase--PKD domain-- 53639_51735_ 53639_51735_ A_3 B_3 4_3_1 6 A_18 B_151 E_81 --A_993 B_8798 E_3827 -- endn_53639_99999 endc NOTPDB CPL AraD-like aldolase/epimerase--NAD(P)-binding Rossmann-fold domains-- 46785_47979_ 46785_47979_ A_30 B_48 5_1_4 78 A_1241 B_7979 E_2143 --A_31 B_55 E_1 -- endn 50037_endc_46785_99999 INPDB CPL "Winged helix" DNA-binding domain--Iron-dependent represor protein, dimerization domain-- 51445_49384_ 51445_49384_ A_1 B_6 4_2_2 7 A_89 B_1646 E_1474 --A_6 B_62 E_34 -- endn_49265 endc_51445 NOTPDB CPL (Trans)glycosidases--Carbohydrate-binding domain-- 50346_50346_ 50346_50346_ A_2 B_5 6_3_3 7 A_34 B_155 E_4 --A_34 B_155 E_4 -- 50346_endn_99999 50346_endc_99999 NOTPDB RPT Photosynthetic reaction centre, H-chain, cytoplasmic domain--Photosynthetic reaction centre, H-chain, cytoplasmic domain-- 54184_54184_ 54184_54184_ A_1 B_37 7_3_4 38 A_7 B_84 E_2 --A_7 B_84 E_2 -- 56601_99999_56112 46626_54184_endc_99999 INPDB RPT Penicillin-binding protein 2x (pbp-2x), c-terminal domain--Penicillin-binding protein 2x (pbp-2x), c-terminal domain-- 51366_51412_ 51366_51412_ A_1 B_2 3_2_1 3 A_289 B_986 E_160 --A_45 B_354 E_83 -- endn_99999 endc NOTPDB CPL Ribulose-phoshate binding barrel--Inosine monophosphate dehydrogenase (IMPDH)-- 49299_50998_ 49299_50998_ A_17 B_2 9_5_4 19 A_103 B_31 E_55 --A_73 B_392 E_284 -- endn_51126_49299_49265_99999 49299_endc_50998_99999 NOTPDB CPL PKD domain--Quinoprotein alcohol dehydrogenase-like-- 49503_51735_ 49503_51735_ A_1 B_2 3_1_2 3 A_81 B_368 E_450 --A_993 B_8798 E_3827 -- endn endc_99999 NOTPDB CPL Cupredoxins--NAD(P)-binding Rossmann-fold domains-- 50203_56762_ 50203_56762_ A_4 B_25 6_5_1 29 A_24 B_163 E_47 --A_56 B_110 E_19 -- 50249_endn_51445_47240_99999 endc NOTPDB CPL Bacterial enterotoxins--Nickel-iron hydrogenase, large subunit-- 48600_51735_ 48600_51735_ A_2 B_12 4_1_3 14 A_15 B_109 E_14 --A_993 B_8798 E_3827 -- endn 51735_48065_99999 NOTPDB CPL Chorismate mutase II--NAD(P)-binding Rossmann-fold domains-- 55608_51998_ 55608_51998_ A_3 B_2 6_3_3 5 A_42 B_71 E_32 --A_39 B_258 E_33 -- 51294_55608_99999 51294_endc_99999 NOTPDB CPL Homing endonucleases--PFL-like glycyl radical enzymes-- 53448_53756_ 53448_53756_ A_3 B_30 7_4_3 33 A_346 B_1868 E_1125 --A_262 B_1575 E_1122 -- 53448_endn_48452_99999 51735_endc_99999 NOTPDB CPL Nucleotide-diphospho-sugar transferases--UDP-Glycosyltransferase/glycogen phosphorylase-- 51735_53335_ 51735_53335_ A_1 B_3 3_2_1 4 A_993 B_8798 E_3827 --A_733 B_3918 E_2070 -- endn_52518 endc NOTPDB CPL NAD(P)-binding Rossmann-fold domains--S-adenosyl-L-methionine-dependent methyltransferases-- 46785_54631_ 46785_54631_ A_1 B_13 4_2_2 14 A_1241 B_7979 E_2143 --A_209 B_782 E_239 -- endn_54631 54631_99999 NOTPDB CPL "Winged helix" DNA-binding domain--CBS-domain-- 47413_52374_ 47413_52374_ A_1 B_6 3_1_2 7 A_123 B_1973 E_199 --A_247 B_1540 E_642 -- endn 52540_endc NOTPDB CPL lambda repressor-like DNA-binding domains--Nucleotidylyl transferase-- 53335_56112_ 53335_56112_ A_1 B_1 3_1_2 2 A_733 B_3918 E_2070 --A_114 B_971 E_9319 -- endn endc_99999 NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--Protein kinase-like (PK-like)-- 52540_56300_ 52540_56300_ A_3 B_6 5_2_3 9 A_2129 B_14320 E_12913 --A_170 B_837 E_750 -- endn_99999 52540_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Metallo-dependent phosphatases-- 51905_56059_ 51905_56059_ A_1 B_2 3_1_2 3 A_358 B_2910 E_1243 --A_192 B_1104 E_490 -- endn endc_99999 NOTPDB CPL FAD/NAD(P)-binding domain--Glutathione synthetase ATP-binding domain-like-- 52540_46600_ 52540_46600_ A_5 B_98 7_4_3 103 A_2129 B_14320 E_12913 --A_10 B_212 E_6 -- 52540_57716_57903_99999 52540_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--C-terminal UvrC-binding domain of UvrB-- 50814_46785_ 50814_46785_ A_1 B_1 3_1_2 2 A_14 B_98 E_391 --A_1241 B_7979 E_2143 -- endn 55681_99999 NOTPDB CPL Lipocalins--"Winged helix" DNA-binding domain-- 54862_51395_ 54862_51395_ A_6 B_11 4_1_3 17 A_411 B_743 E_103 --A_111 B_849 E_252 -- endn 51905_endc_99999 NOTPDB CPL 4Fe-4S ferredoxins--FMN-linked oxidoreductases-- 52242_51658_ 52242_51658_ A_1 B_3 3_1_2 4 A_62 B_169 E_35 --A_102 B_575 E_65 -- endn 51412_endc NOTPDB CPL Cobalamin (vitamin B12)-binding domain--Xylose isomerase-like-- 52833_46626_ 52833_46626_ A_1 B_3 4_2_2 4 A_220 B_2517 E_2068 --A_40 B_894 E_220 -- endn_99999 endc_99999 NOTPDB CPL Thioredoxin-like--Cytochrome c-- 51445_52317_ 51445_52317_ A_4 B_20 5_2_3 24 A_89 B_1646 E_1474 --A_204 B_1244 E_262 -- endn_75005 50998_99999_51011 INPDB CPL (Trans)glycosidases--Class I glutamine amidotransferase-like-- 51366_51713_ 51366_51713_ A_1 B_4 4_2_2 5 A_289 B_986 E_160 --A_85 B_280 E_82 -- endn_99999 endc_99999 NOTPDB CPL Ribulose-phoshate binding barrel--tRNA-guanine transglycosylase-- 53800_53800_ 53800_53800_ A_1 B_1 4_2_2 2 A_22 B_139 E_38 --A_22 B_139 E_38 -- endn_99999 endc_99999 NOTPDB RPT Chelatase--Chelatase-- 47802_47781_ 47802_47781_ A_6 B_16 6_4_2 22 A_30 B_54 E_72 --A_49 B_595 E_68 -- 52540_endn_51905_99999 81301_99999 NOTPDB CPL DNA polymerase beta, N-terminal domain-like--RuvA domain 2-like-- 53756_53335_ 53756_53335_ A_1 B_5 8_5_3 6 A_262 B_1575 E_1122 --A_733 B_3918 E_2070 -- 53335_endn_52833_53756_48452 53448_endc_99999 NOTPDB CPL UDP-Glycosyltransferase/glycogen phosphorylase--S-adenosyl-L-methionine-dependent methyltransferases-- 49384_63446_ 49384_63446_ A_1 B_2 3_2_1 3 A_6 B_62 E_34 --A_9 B_38 E_1 -- 50969_48208 endc NOTPDB CPL Carbohydrate-binding domain--Type I dockerin domain-- 56024_52540_ 56024_52540_ A_2 B_18 5_2_3 20 A_32 B_314 E_180 --A_2129 B_14320 E_12913 -- endn_99999 52540_endc_99999 NOTPDB CPL Phospholipase D/nuclease--P-loop containing nucleotide triphosphate hydrolases-- 49265_51445_ 49265_51445_ A_1 B_13 9_5_4 14 A_23 B_135 E_1734 --A_89 B_1646 E_1474 -- endn_49785_51055_49384_49265 54556_49384_endc_99999 NOTPDB CPL Fibronectin type III--(Trans)glycosidases-- 47413_47413_ 47413_47413_ A_1 B_8 7_3_4 9 A_123 B_1973 E_199 --A_123 B_1973 E_199 -- 47413_endn_57783 47413_51306_endc_99999 NOTPDB RPT lambda repressor-like DNA-binding domains--lambda repressor-like DNA-binding domains-- 51717_51412_ 51717_51412_ A_1 B_1 3_2_1 2 A_77 B_207 E_36 --A_45 B_354 E_83 -- endn_99999 endc NOTPDB CPL Dihydropteroate synthetase-like--Inosine monophosphate dehydrogenase (IMPDH)-- 63965_52540_ 63965_52540_ A_1 B_1 3_2_1 2 A_16 B_39 E_6 --A_2129 B_14320 E_12913 -- endn_99999 endc NOTPDB CPL Precorrin-8x methylmutase--P-loop containing nucleotide triphosphate hydrolases-- 56281_56281_ 56281_56281_ A_2 B_1 3_2_1 3 A_273 B_950 E_318 --A_273 B_950 E_318 -- endn_99999 endc NOTPDB RPT Metallo-hydrolase/oxidoreductase--Metallo-hydrolase/oxidoreductase-- 54862_54862_ 54862_54862_ A_20 B_5 8_4_4 25 A_411 B_743 E_103 --A_411 B_743 E_103 -- endn_46548_54862_99999 endc_54862_99999_51971 NOTPDB RPT 4Fe-4S ferredoxins--4Fe-4S ferredoxins-- 56228_48310_ 56228_48310_ A_36 B_5 4_2_2 41 A_37 B_7 E_1 --A_40 B_8 E_3 -- endn_99999 endc_99999 INPDB CPL Aldehyde ferredoxin oxidoreductase, N-terminal domain--Aldehyde ferredoxin oxidoreductase, C-terminal domains-- 53323_52518_ 53323_52518_ A_20 B_18 3_1_2 38 A_72 B_87 E_1 --A_239 B_1128 E_328 -- endn 52922_99999 NOTPDB CPL Pyruvate-ferredoxin oxidoreductase, PFOR, domain III--Thiamin diphosphate-binding fold (THDP-binding)-- 46894_46894_ 46894_46894_ A_6 B_3 3_2_1 9 A_87 B_1032 E_48 --A_87 B_1032 E_48 -- endn_99999 endc NOTPDB RPT C-terminal effector domain of the bipartite response regulators--C-terminal effector domain of the bipartite response regulators-- 48452_53300_ 48452_53300_ A_1 B_3 4_1_3 4 A_146 B_1937 E_3442 --A_51 B_345 E_996 -- endn 48452_endc_99999 NOTPDB CPL TPR-like--vWA-like-- 46785_53822_ 46785_53822_ A_1 B_16 4_2_2 17 A_1241 B_7979 E_2143 --A_49 B_1285 E_794 -- endn_99999 endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Periplasmic binding protein-like I-- 47413_52540_ 47413_52540_ A_1 B_15 8_3_5 16 A_123 B_1973 E_199 --A_2129 B_14320 E_12913 -- endn_99999_55608 52540_47681_endc_48019_99999 NOTPDB CPL lambda repressor-like DNA-binding domains--P-loop containing nucleotide triphosphate hydrolases-- 53822_46626_ 53822_46626_ A_2 B_6 3_2_1 8 A_49 B_1285 E_794 --A_40 B_894 E_220 -- endn_99999 endc NOTPDB CPL Periplasmic binding protein-like I--Cytochrome c-- 53633_55021_ 53633_55021_ A_7 B_48 4_2_2 55 A_84 B_449 E_69 --A_109 B_662 E_147 -- 53383_endn 55021_99999 NOTPDB CPL Carbamate kinase-like--Regulatory domain in the aminoacid metabolism-- 52540_53300_ 52540_53300_ A_1 B_2 3_2_1 3 A_2129 B_14320 E_12913 --A_51 B_345 E_996 -- 52540_endn endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--vWA-like-- 46689_46955_ 46689_46955_ A_1 B_3 4_1_3 4 A_246 B_4125 E_4002 --A_55 B_784 E_148 -- endn endc_53098_99999 NOTPDB CPL Homeodomain-like--Putative DNA-binding domain-- 52540_47823_ 52540_47823_ A_1 B_1 3_1_2 2 A_2129 B_14320 E_12913 --A_29 B_507 E_8 -- endn 56349_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--lambda integrase-like, N-terminal domain-- 53155_46894_ 53155_46894_ A_4 B_35 3_2_1 39 A_7 B_98 E_8 --A_87 B_1032 E_48 -- endn_46689 endc NOTPDB CPL Methylated DNA-protein cysteine methyltransferase domain--C-terminal effector domain of the bipartite response regulators-- 53623_51735_ 53623_51735_ A_3 B_1 5_3_2 4 A_21 B_536 E_49 --A_993 B_8798 E_3827 -- endn_51984_51735 51735_endc NOTPDB CPL MurD-like peptide ligases, catalytic domain--NAD(P)-binding Rossmann-fold domains-- 52540_56059_ 52540_56059_ A_1 B_1 3_2_1 2 A_2129 B_14320 E_12913 --A_192 B_1104 E_490 -- endn_51905 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Glutathione synthetase ATP-binding domain-like-- 46689_46894_ 46689_46894_ A_1 B_2 4_2_2 3 A_246 B_4125 E_4002 --A_87 B_1032 E_48 -- 52540_46689 52540_endc NOTPDB CPL Homeodomain-like--C-terminal effector domain of the bipartite response regulators-- 53448_51182_ 53448_51182_ A_6 B_37 3_1_2 43 A_346 B_1868 E_1125 --A_107 B_1063 E_385 -- endn endc_99999 NOTPDB CPL Nucleotide-diphospho-sugar transferases--RmlC-like cupins-- 46785_51735_ 46785_51735_ A_1 B_20 4_2_2 21 A_1241 B_7979 E_2143 --A_993 B_8798 E_3827 -- endn_99999 endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--NAD(P)-binding Rossmann-fold domains-- 52540_48150_ 52540_48150_ A_1 B_1 3_1_2 2 A_2129 B_14320 E_12913 --A_68 B_400 E_107 -- endn endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--DNA-glycosylase-- 46689_55608_ 46689_55608_ A_2 B_2 3_1_2 4 A_246 B_4125 E_4002 --A_42 B_71 E_32 -- endn endc_55608 NOTPDB CPL Homeodomain-like--Homing endonucleases-- 52833_52540_ 52833_52540_ A_2 B_3 3_1_2 5 A_220 B_2517 E_2068 --A_2129 B_14320 E_12913 -- endn endc_52402 NOTPDB CPL Thioredoxin-like--P-loop containing nucleotide triphosphate hydrolases-- 52096_50998_ 52096_50998_ A_1 B_1 3_2_1 2 A_96 B_1208 E_331 --A_73 B_392 E_284 -- endn_99999 endc NOTPDB CPL ClpP/crotonase--Quinoprotein alcohol dehydrogenase-like-- 47240_47240_ 47240_47240_ A_2 B_6 3_1_2 8 A_126 B_660 E_337 --A_126 B_660 E_337 -- endn endc_99999 NOTPDB RPT Ferritin-like--Ferritin-like-- 54862_55124_ 54862_55124_ A_2 B_1 3_1_2 3 A_411 B_743 E_103 --A_24 B_104 E_14 -- endn 99999_56014 NOTPDB CPL 4Fe-4S ferredoxins--Sulfite reductase, domains 1 and 3-- 50998_49299_ 50998_49299_ A_21 B_1 11_6_5 22 A_73 B_392 E_284 --A_103 B_31 E_55 -- 52743_endn_51126_49299_50998_99999 49299_49373_endc_50998_99999 NOTPDB CPL Quinoprotein alcohol dehydrogenase-like--PKD domain-- 55021_56784_ 55021_56784_ A_1 B_4 3_2_1 5 A_109 B_662 E_147 --A_230 B_1745 E_1267 -- 55021_endn endc NOTPDB CPL Regulatory domain in the aminoacid metabolism--HAD-like-- 46966_55785_ 46966_55785_ A_1 B_1 4_2_2 2 A_7 B_30 E_584 --A_168 B_1284 E_394 -- endn_99999 47384_55785 NOTPDB CPL Spectrin repeat--PYP-like sensor domain (PAS domain)-- 53850_50998_ 53850_50998_ A_3 B_2 3_2_1 5 A_257 B_5627 E_740 --A_73 B_392 E_284 -- endn_99999 endc NOTPDB CPL Periplasmic binding protein-like II--Quinoprotein alcohol dehydrogenase-like-- 52218_50475_ 52218_50475_ A_2 B_16 3_2_1 18 A_110 B_706 E_157 --A_59 B_417 E_63 -- 56281_endn endc NOTPDB CPL Flavoproteins--FMN-binding split barrel-- 56059_51735_ 56059_51735_ A_9 B_10 5_3_2 19 A_192 B_1104 E_490 --A_993 B_8798 E_3827 -- endn_52440_99999 52210_endc NOTPDB CPL Glutathione synthetase ATP-binding domain-like--NAD(P)-binding Rossmann-fold domains-- 57716_47413_ 57716_47413_ A_1 B_1 3_1_2 2 A_72 B_426 E_2067 --A_123 B_1973 E_199 -- endn endc_99999 NOTPDB CPL Glucocorticoid receptor-like (DNA-binding domain)--lambda repressor-like DNA-binding domains-- 48452_53448_ 48452_53448_ A_1 B_9 5_2_3 10 A_146 B_1937 E_3442 --A_346 B_1868 E_1125 -- endn_54495 53756_endc_99999 NOTPDB CPL TPR-like--Nucleotide-diphospho-sugar transferases-- 47781_81301_ 47781_81301_ A_6 B_15 4_2_2 21 A_49 B_595 E_68 --A_169 B_325 E_254 -- 47802_51905 51735_99999 NOTPDB CPL RuvA domain 2-like--Nucleotidyltransferase-- 53649_49899_ 53649_49899_ A_1 B_8 5_3_2 9 A_60 B_683 E_430 --A_22 B_208 E_1314 -- endn_54368_99999 endc_99999 NOTPDB CPL Alkaline phosphatase-like--Concanavalin A-like lectins/glucanases-- 52980_52540_ 52980_52540_ A_3 B_7 7_4_3 10 A_117 B_308 E_46 --A_2129 B_14320 E_12913 -- 52540_endn_46785_99999 52540_endc_99999 NOTPDB CPL Restriction endonuclease-like--P-loop containing nucleotide triphosphate hydrolases-- 53041_46689_ 53041_46689_ A_2 B_39 4_2_2 41 A_60 B_294 E_160 --A_246 B_4125 E_4002 -- endn_99999 endc_99999 INPDB CPL Resolvase-like--Homeodomain-like-- 81296_52540_ 81296_52540_ A_1 B_1 4_2_2 2 A_40 B_404 E_1207 --A_2129 B_14320 E_12913 -- 52540_99999 endc_99999 NOTPDB CPL E set domains--P-loop containing nucleotide triphosphate hydrolases-- 51294_52540_ 51294_52540_ A_11 B_2 11_5_6 13 A_61 B_50 E_53 --A_2129 B_14320 E_12913 -- 52540_51294_endn_56672_99999 52540_54752_47917_endc_48019_99999 NOTPDB CPL Hedgehog/intein (Hint) domain--P-loop containing nucleotide triphosphate hydrolases-- 52402_52821_ 52402_52821_ A_3 B_14 3_2_1 17 A_350 B_1402 E_436 --A_39 B_452 E_298 -- 50249_99999 endc NOTPDB CPL Adenine nucleotide alpha hydrolases-like--Rhodanese/Cell cycle control phosphatase-- 51395_46785_ 51395_46785_ A_1 B_1 4_2_2 2 A_111 B_849 E_252 --A_1241 B_7979 E_2143 -- endn_46785 endc_99999 NOTPDB CPL FMN-linked oxidoreductases--"Winged helix" DNA-binding domain-- 52540_51412_ 52540_51412_ A_1 B_1 3_2_1 2 A_2129 B_14320 E_12913 --A_45 B_354 E_83 -- endn_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Inosine monophosphate dehydrogenase (IMPDH)-- 63393_52540_ 63393_52540_ A_1 B_2 5_2_3 3 A_121 B_137 E_69 --A_2129 B_14320 E_12913 -- endn_99999 52540_53795_99999 NOTPDB CPL RBP12 subunit of RNA polymerase II--P-loop containing nucleotide triphosphate hydrolases-- 46894_52540_ 46894_52540_ A_3 B_17 7_4_3 20 A_87 B_1032 E_48 --A_2129 B_14320 E_12913 -- 52540_endn_46689_99999 endc_55729_99999 NOTPDB CPL C-terminal effector domain of the bipartite response regulators--P-loop containing nucleotide triphosphate hydrolases-- 52540_75138_ 52540_75138_ A_2 B_27 4_1_3 29 A_2129 B_14320 E_12913 --A_4 B_98 E_2 -- endn 56784_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--HPr kinase/phoshatase HprK N-terminal domain-- 54675_51366_ 54675_51366_ A_4 B_2 4_2_2 6 A_28 B_108 E_35 --A_289 B_986 E_160 -- endn_54675 endc_99999 NOTPDB CPL Quinolinic acid phosphoribosyltransferase, N-terminal domain--Ribulose-phoshate binding barrel-- 49265_51126_ 49265_51126_ A_1 B_4 4_3_1 5 A_23 B_135 E_1734 --A_116 B_481 E_444 -- endn_49265_99999 endc NOTPDB CPL Fibronectin type III--Pectin lyase-like-- 51998_51294_ 51998_51294_ A_6 B_1 6_4_2 7 A_39 B_258 E_33 --A_61 B_50 E_53 -- endn_47473_55608_99999 55608_99999 NOTPDB CPL PFL-like glycyl radical enzymes--Hedgehog/intein (Hint) domain-- 46548_53706_ 46548_53706_ A_1 B_8 4_2_2 9 A_125 B_477 E_67 --A_63 B_328 E_38 -- 54292_51971 endc_50692 NOTPDB CPL alpha-helical ferredoxin--Formate dehydrogenase/DMSO reductase, domains 1-3-- 52540_56712_ 52540_56712_ A_9 B_4 5_2_3 13 A_2129 B_14320 E_12913 --A_33 B_243 E_47 -- 52540_endn endc_48019_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--Prokaryotic type I DNA topoisomerase-- 55424_52821_ 55424_52821_ A_1 B_17 4_2_2 18 A_55 B_393 E_136 --A_39 B_452 E_298 -- endn_51905 endc_64307 NOTPDB CPL FAD/NAD-linked reductases, dimerisation (C-terminal) domain--Rhodanese/Cell cycle control phosphatase-- 50960_82171_ 50960_82171_ A_3 B_1 6_4_2 4 A_34 B_192 E_75 --A_11 B_35 E_129 -- 50969_51338_50974_99999 49299_99999 NOTPDB CPL TolB, C-terminal domain--Dipeptidyl peptidase IV/CD26, N-terminal domain-- 51735_50249_ 51735_50249_ A_1 B_1 3_1_2 2 A_993 B_8798 E_3827 --A_390 B_2734 E_1438 -- endn endc_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Nucleic acid-binding proteins-- 53807_50998_ 53807_50998_ A_2 B_1 3_2_1 3 A_104 B_499 E_42 --A_73 B_392 E_284 -- endn_99999 endc NOTPDB CPL "Helical backbone" metal receptor--Quinoprotein alcohol dehydrogenase-like-- 56059_56059_ 56059_56059_ A_1 B_4 4_2_2 5 A_192 B_1104 E_490 --A_192 B_1104 E_490 -- endn_99999 endc_99999 NOTPDB RPT Glutathione synthetase ATP-binding domain-like--Glutathione synthetase ATP-binding domain-like-- 54862_53920_ 54862_53920_ A_1 B_13 5_3_2 14 A_411 B_743 E_103 --A_2 B_18 E_34 -- endn_54292_99999 endc_55785 INPDB CPL 4Fe-4S ferredoxins--Fe-only hydrogenase-- 50974_50974_ 50974_50974_ A_1 B_1 3_2_1 2 A_28 B_71 E_18 --A_28 B_71 E_18 -- endn_47090 endc NOTPDB RPT Nitrous oxide reductase, N-terminal domain--Nitrous oxide reductase, N-terminal domain-- 51735_56796_ 51735_56796_ A_1 B_2 3_2_1 3 A_993 B_8798 E_3827 --A_47 B_341 E_47 -- endn_51735 endc NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Dehydroquinate synthase-like-- 52540_51294_ 52540_51294_ A_8 B_9 7_4_3 17 A_2129 B_14320 E_12913 --A_61 B_50 E_53 -- 50249_endn_48024_99999 52540_99999_55608 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Hedgehog/intein (Hint) domain-- 51395_51905_ 51395_51905_ A_7 B_31 7_2_5 38 A_111 B_849 E_252 --A_358 B_2910 E_1243 -- endn_54862 51905_51735_endc_54862_99999 INPDB CPL FMN-linked oxidoreductases--FAD/NAD(P)-binding domain-- 54292_51905_ 54292_51905_ A_3 B_1 5_2_3 4 A_44 B_565 E_187 --A_358 B_2910 E_1243 -- endn_99999 endc_51971_99999 NOTPDB CPL 2Fe-2S ferredoxin-like--FAD/NAD(P)-binding domain-- 54862_51735_ 54862_51735_ A_3 B_2 5_3_2 5 A_411 B_743 E_103 --A_993 B_8798 E_3827 -- endn_51905_99999 endc_99999 NOTPDB CPL 4Fe-4S ferredoxins--NAD(P)-binding Rossmann-fold domains-- 46785_56024_ 46785_56024_ A_13 B_7 4_1_3 20 A_1241 B_7979 E_2143 --A_32 B_314 E_180 -- endn 46894_endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Phospholipase D/nuclease-- 54862_56014_ 54862_56014_ A_5 B_3 3_2_1 8 A_411 B_743 E_103 --A_25 B_194 E_20 -- 55124_99999 endc NOTPDB CPL 4Fe-4S ferredoxins--Sulfite reductase hemoprotein (SiRHP), domains 2 and 4-- 55785_55874_ 55785_55874_ A_8 B_45 9_7_2 53 A_168 B_1284 E_394 --A_178 B_2970 E_398 -- endn_50494_55781_52172_55979_99999_55785 52172_endc NOTPDB CPL PYP-like sensor domain (PAS domain)--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 51735_52833_ 51735_52833_ A_1 B_2 3_1_2 3 A_993 B_8798 E_3827 --A_220 B_2517 E_2068 -- endn endc_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Thioredoxin-like-- 52540_46894_ 52540_46894_ A_1 B_3 6_3_3 4 A_2129 B_14320 E_12913 --A_87 B_1032 E_48 -- 52540_endn_52172 52540_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--C-terminal effector domain of the bipartite response regulators-- 49373_49373_ 49373_49373_ A_1 B_18 5_3_2 19 A_20 B_171 E_29 --A_20 B_171 E_29 -- endn_49373_99999 49373_99999 INPDB RPT Invasin/intimin cell-adhesion fragments--Invasin/intimin cell-adhesion fragments-- 51735_51366_ 51735_51366_ A_2 B_1 4_2_2 3 A_993 B_8798 E_3827 --A_289 B_986 E_160 -- endn_52507 endc_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Ribulose-phoshate binding barrel-- 51905_50022_ 51905_50022_ A_1 B_7 4_2_2 8 A_358 B_2910 E_1243 --A_37 B_275 E_102 -- endn_99999 endc_99999 NOTPDB CPL FAD/NAD(P)-binding domain--ISP domain-- 57802_52540_ 57802_52540_ A_7 B_22 8_3_5 29 A_77 B_171 E_177 --A_2129 B_14320 E_12913 -- 52540_endn_99999 52540_53795_50447_endc_99999 INPDB CPL Rubredoxin-like--P-loop containing nucleotide triphosphate hydrolases-- 46955_53098_ 46955_53098_ A_2 B_5 5_3_2 7 A_55 B_784 E_148 --A_290 B_2494 E_2335 -- endn_99999_46689 endc_99999 NOTPDB CPL Putative DNA-binding domain--Ribonuclease H-like-- 47240_57802_ 47240_57802_ A_14 B_11 3_2_1 25 A_126 B_660 E_337 --A_77 B_171 E_177 -- endn_57802 endc NOTPDB CPL Ferritin-like--Rubredoxin-like-- 51569_51366_ 51569_51366_ A_6 B_2 3_1_2 8 A_136 B_1089 E_356 --A_289 B_986 E_160 -- endn endc_99999 NOTPDB CPL Aldolase--Ribulose-phoshate binding barrel-- 52172_55781_ 52172_55781_ A_2 B_7 9_3_6 9 A_85 B_3166 E_241 --A_54 B_1030 E_131 -- endn_81606_99999 55781_47384_endc_55073_55785_99999 NOTPDB CPL CheY-like--GAF domain-like-- ABC 365 81464_49503_ 81464_49503_ A_1 B_87 E_4 6_2_4 92 A_5 B_102 E_21 --A_81 B_368 E_450 -- endn_99999 46626_51126_endc_99999 INPDB CPL Cytochrome c oxidase subunit II-like, transmembrane region--Cupredoxins-- 51338_51556_ 51338_51556_ A_64 B_407 E_61 13_7_6 532 A_82 B_584 E_154 --A_183 B_1070 E_385 -- 52499_51278_endn_51338_54593_69304_99999 51556_48557_51338_47869_endc_99999 INPDB CPL Composite domain of metallo-dependent hydrolases--Metallo-dependent hydrolases-- 56024_56024_ 56024_56024_ A_1 B_119 E_60 8_6_2 180 A_32 B_314 E_180 --A_32 B_314 E_180 -- endn_50729_49611_57850_99999_49879 endc_99999 INPDB RPT Phospholipase D/nuclease--Phospholipase D/nuclease-- 49299_49299_ 49299_49299_ A_54 B_8 E_28 28_21_7 90 A_103 B_31 E_55 --A_103 B_31 E_55 -- 50969_51126_endn_49611_47473_50998_52047_49373_52058_48726_49464_69318_49299_50952_50960_82171_49777_56219_50939_50974_99999 81321_49299_52058_endc_50974_50998_99999 NOTPDB RPT PKD domain--PKD domain-- 55347_55021_ 55347_55021_ A_2 B_51 E_1 3_2_1 54 A_119 B_836 E_588 --A_109 B_662 E_147 -- endn_51735 endc NOTPDB CPL Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain--Regulatory domain in the aminoacid metabolism-- 81301_81301_ 81301_81301_ A_1 B_1 E_3 4_2_2 5 A_169 B_325 E_254 --A_169 B_325 E_254 -- endn_99999 endc_99999 NOTPDB RPT Nucleotidyltransferase--Nucleotidyltransferase-- 51735_52540_ 51735_52540_ A_10 B_14 E_11 10_3_7 35 A_993 B_8798 E_3827 --A_2129 B_14320 E_12913 -- 53223_endn_99999 52540_53795_53271_52156_endc_46689_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--P-loop containing nucleotide triphosphate hydrolases-- 55781_55874_ 55781_55874_ A_6 B_53 E_4 6_4_2 63 A_54 B_1030 E_131 --A_178 B_2970 E_398 -- endn_55781_55785_99999 52172_endc NOTPDB CPL GAF domain-like--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 52172_55785_ 52172_55785_ A_19 B_49 E_11 11_4_7 79 A_85 B_3166 E_241 --A_168 B_1284 E_394 -- 47226_endn_52172_99999 55781_endc_47384_55073_55874_55785_99999 NOTPDB CPL CheY-like--PYP-like sensor domain (PAS domain)-- 52540_57774_ 52540_57774_ A_7 B_67 E_48 6_3_3 122 A_2129 B_14320 E_12913 --A_17 B_84 E_96 -- 52540_endn_57774 52540_endc_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--Microbial and mitochondrial ADK, insert "zinc finger" domain-- 52540_50447_ 52540_50447_ A_66 B_626 E_327 20_12_8 1019 A_2129 B_14320 E_12913 --A_102 B_772 E_432 -- 51126_endn_48695_57783_46988_55826_57802_54211_81271_51182_99999_55608 52540_50447_52156_54980_endc_50465_56014_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--Translation proteins-- 53795_54631_ 53795_54631_ A_3 B_61 E_1 6_2_4 65 A_421 B_3843 E_485 --A_209 B_782 E_239 -- endn_99999 52540_54631_endc_99999 NOTPDB CPL PEP carboxykinase-like--CBS-domain-- 52402_69864_ 52402_69864_ A_14 B_76 E_24 4_2_2 114 A_350 B_1402 E_436 --A_14 B_77 E_30 -- endn_99999 endc_99999 INPDB CPL Adenine nucleotide alpha hydrolases-like--Argininosuccinate synthetase, C-terminal domain-- 51984_53623_ 51984_53623_ A_8 B_203 E_3 7_2_5 214 A_9 B_210 E_6 --A_21 B_536 E_49 -- endn_99999 56553_51735_endc_99999_53244 INPDB CPL MurCD N-terminal domain--MurD-like peptide ligases, catalytic domain-- 53706_50692_ 53706_50692_ A_31 B_228 E_2 9_5_4 261 A_63 B_328 E_38 --A_113 B_397 E_88 -- endn_46548_54292_54862_99999 63380_endc_54862_99999 INPDB CPL Formate dehydrogenase/DMSO reductase, domains 1-3--ADC-like-- 52317_52402_ 52317_52402_ A_2 B_87 E_19 5_2_3 108 A_204 B_1244 E_262 --A_350 B_1402 E_436 -- endn_99999 54810_endc_99999 INPDB CPL Class I glutamine amidotransferase-like--Adenine nucleotide alpha hydrolases-like-- 52418_54680_ 52418_54680_ A_8 B_47 E_4 3_2_1 59 A_27 B_155 E_18 --A_13 B_58 E_12 -- endn_47648 endc INPDB CPL Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain--Pyrimidine nucleoside phosphorylase C-terminal domain-- 53901_53901_ 53901_53901_ A_79 B_777 E_251 17_8_9 1107 A_95 B_891 E_374 --A_95 B_891 E_374 -- 53901_50129_endn_53474_52777_47336_52151_99999 54637_48613_55718_endc_52151_47895_53901_99999_53850 INPDB RPT Thiolase-like--Thiolase-like-- 56784_81665_ 56784_81665_ A_10 B_45 E_131 6_4_2 186 A_230 B_1745 E_1267 --A_43 B_361 E_378 -- endn_81660_99999_81665 endc_99999 INPDB CPL HAD-like--Calcium ATPase, transmembrane domain M-- 48013_53335_ 48013_53335_ A_13 B_38 E_1 5_2_3 52 A_15 B_162 E_17 --A_733 B_3918 E_2070 -- endn_99999 53335_endc_57501 NOTPDB CPL Antitermination factor NusB--S-adenosyl-L-methionine-dependent methyltransferases-- 51905_55424_ 51905_55424_ A_52 B_376 E_121 11_7_4 549 A_358 B_2910 E_1243 --A_55 B_393 E_136 -- 52467_endn_52833_51905_50022_51971_99999 52540_endc_52821_99999 INPDB CPL FAD/NAD(P)-binding domain--FAD/NAD-linked reductases, dimerisation (C-terminal) domain-- 55116_55116_ 55116_55116_ A_2 B_8 E_9 3_1_2 19 A_3 B_12 E_37 --A_3 B_12 E_37 -- endn endc_99999 INPDB RPT Formiminotransferase domain of formiminotransferase-cyclodeaminase.--Formiminotransferase domain of formiminotransferase-cyclodeaminase.-- 51735_52210_ 51735_52210_ A_44 B_132 E_38 9_5_4 214 A_993 B_8798 E_3827 --A_60 B_218 E_78 -- 52210_endn_56059_99999_55729 52210_48256_endc_99999 INPDB CPL NAD(P)-binding Rossmann-fold domains--Succinyl-CoA synthetase domains-- 53448_51161_ 53448_51161_ A_18 B_99 E_37 7_4_3 154 A_346 B_1868 E_1125 --A_81 B_714 E_168 -- endn_51735_46785_99999 53738_endc_99999 INPDB CPL Nucleotide-diphospho-sugar transferases--Trimeric LpxA-like enzymes-- 81271_52540_ 81271_52540_ A_1 B_4 E_1 6_3_3 6 A_25 B_298 E_67 --A_2129 B_14320 E_12913 -- 52540_endn_99999 52156_50447_endc NOTPDB CPL TGS-like--P-loop containing nucleotide triphosphate hydrolases-- 55021_55021_ 55021_55021_ A_12 B_95 E_30 11_6_5 137 A_109 B_662 E_147 --A_109 B_662 E_147 -- 53633_endn_52440_53686_81891_99999 55021_56784_endc_52788_99999 INPDB RPT Regulatory domain in the aminoacid metabolism--Regulatory domain in the aminoacid metabolism-- 50998_50969_ 50998_50969_ A_2 B_2 E_1 4_2_2 5 A_73 B_392 E_284 --A_24 B_218 E_336 -- endn_99999 endc_99999 NOTPDB CPL Quinoprotein alcohol dehydrogenase-like--YVTN repeat-like/Quinoprotein amine dehydrogenase-- 56059_52335_ 56059_52335_ A_9 B_81 E_18 6_2_4 108 A_192 B_1104 E_490 --A_15 B_241 E_47 -- endn_52440 46557_51556_endc_53671 INPDB CPL Glutathione synthetase ATP-binding domain-like--Methylglyoxal synthase-like-- 47794_52540_ 47794_52540_ A_17 B_2 E_40 4_2_2 59 A_29 B_51 E_56 --A_2129 B_14320 E_12913 -- endn_99999 endc_99999 NOTPDB CPL DNA repair protein Rad51, N-terminal domain--P-loop containing nucleotide triphosphate hydrolases-- 46955_55681_ 46955_55681_ A_17 B_85 E_19 6_3_3 121 A_55 B_784 E_148 --A_205 B_1250 E_450 -- endn_56037_99999 endc_99999_54991 INPDB CPL Putative DNA-binding domain--Class II aaRS and biotin synthetases-- 51735_48179_ 51735_48179_ A_65 B_639 E_175 18_8_10 879 A_993 B_8798 E_3827 --A_71 B_674 E_226 -- 53335_52096_endn_53756_51735_51905_48179_99999 54637_50969_51294_51905_51735_endc_48179_52413_51971_99999 INPDB CPL NAD(P)-binding Rossmann-fold domains--6-phosphogluconate dehydrogenase C-terminal domain-like-- 53795_52540_ 53795_52540_ A_9 B_89 E_32 13_5_8 130 A_421 B_3843 E_485 --A_2129 B_14320 E_12913 -- 52540_53795_endn_48403_99999 52210_52540_50331_52440_48452_endc_82653_99999 NOTPDB CPL PEP carboxykinase-like--P-loop containing nucleotide triphosphate hydrolases-- 57783_52540_ 57783_52540_ A_2 B_3 E_2 6_2_4 7 A_193 B_620 E_393 --A_2129 B_14320 E_12913 -- endn_99999 52540_50447_endc_99999 NOTPDB CPL Zinc beta-ribbon--P-loop containing nucleotide triphosphate hydrolases-- 55781_47384_ 55781_47384_ A_2 B_84 E_6 8_6_2 92 A_54 B_1030 E_131 --A_45 B_1750 E_74 -- endn_55781_52172_55785_99999_53955 99999_55874 NOTPDB CPL GAF domain-like--Homodimeric domain of signal transducing histidine kinase-- 50129_51735_ 50129_51735_ A_60 B_725 E_320 21_10_11 1105 A_67 B_883 E_442 --A_993 B_8798 E_3827 -- 54637_53335_endn_51735_49265_50249_53633_53474_53218_99999 50129_54334_51735_endc_52733_52047_51351_53474_55347_47336_99999 INPDB CPL GroES-like--NAD(P)-binding Rossmann-fold domains-- 46609_54719_ 46609_54719_ A_12 B_119 E_35 6_3_3 166 A_12 B_131 E_41 --A_12 B_120 E_42 -- endn_46609_99999 endc_52821_99999 INPDB CPL Fe,Mn superoxide dismutase (SOD), N-terminal domain--Fe,Mn superoxide dismutase (SOD), C-terminal domain-- 56037_46955_ 56037_46955_ A_17 B_94 E_19 5_3_2 130 A_22 B_111 E_25 --A_55 B_784 E_148 -- 50249_endn_46955 55681_99999 INPDB CPL B3/B4 domain of PheRS, PheT--Putative DNA-binding domain-- 51695_51395_ 51695_51395_ A_1 B_4 E_2 4_2_2 7 A_5 B_143 E_312 --A_111 B_849 E_252 -- endn_99999 endc_53316 NOTPDB CPL Phosphatidylinositol-specific phospholipase C (PI-PLC)--FMN-linked oxidoreductases-- 55785_55781_ 55785_55781_ A_29 B_94 E_2 19_10_9 125 A_168 B_1284 E_394 --A_54 B_1030 E_131 -- endn_54631_55781_52172_81606_53850_55785_99999_55874_49879 endc_47384_55073_75625_55781_81606_99999_55785_55874 NOTPDB CPL PYP-like sensor domain (PAS domain)--GAF domain-like-- 46785_53098_ 46785_53098_ A_1 B_137 E_8 6_4_2 146 A_1241 B_7979 E_2143 --A_290 B_2494 E_2335 -- endn_48726_46689_99999 endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Ribonuclease H-like-- 47781_47781_ 47781_47781_ A_1 B_26 E_4 8_3_5 31 A_49 B_595 E_68 --A_49 B_595 E_68 -- 50249_endn_99999 52113_48150_56219_endc_99999 NOTPDB RPT RuvA domain 2-like--RuvA domain 2-like-- 48371_52540_ 48371_52540_ A_1 B_2 E_9 7_4_3 12 A_73 B_255 E_3951 --A_2129 B_14320 E_12913 -- 52540_endn_48371_99999 52540_endc_99999 NOTPDB CPL ARM repeat--P-loop containing nucleotide triphosphate hydrolases-- 53697_54631_ 53697_54631_ A_2 B_4 E_4 5_1_4 10 A_65 B_630 E_103 --A_209 B_782 E_239 -- endn 53448_54631_endc_99999 NOTPDB CPL SIS domain--CBS-domain-- 47384_55874_ 47384_55874_ A_44 B_1699 E_52 38_29_9 1795 A_45 B_1750 E_74 --A_178 B_2970 E_398 -- 53681_56176_50405_endn_48613_48452_54909_50998_81648_54211_54695_55781_52172_50447_56837_55785_51197_55052_53271_53167_81340_47323_47226_53383_54631_56059_56601_99999_53850 52540_53271_50341_52172_endc_55874_53850_55785_99999 INPDB CPL Homodimeric domain of signal transducing histidine kinase--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 50969_63825_ 50969_63825_ A_1 B_2 E_4 8_4_4 7 A_24 B_218 E_336 --A_7 B_35 E_205 -- 57196_endn_50978_99999 57196_63825_endc_99999 NOTPDB CPL YVTN repeat-like/Quinoprotein amine dehydrogenase--Low density lipoprotein (LDL) receptor YWTD domain-- 52949_53187_ 52949_53187_ A_1 B_86 E_30 4_2_2 117 A_1 B_91 E_32 --A_105 B_1042 E_648 -- endn_99999 endc_99999 INPDB CPL Leucine aminopeptidase (Aminopeptidase A), N-terminal domain--Zn-dependent exopeptidases-- 53271_53271_ 53271_53271_ A_3 B_25 E_20 4_2_2 48 A_132 B_838 E_254 --A_132 B_838 E_254 -- endn_99999 endc_99999 NOTPDB RPT PRTase-like--PRTase-like-- 50447_52156_ 50447_52156_ A_17 B_77 E_36 5_2_3 130 A_102 B_772 E_432 --A_17 B_103 E_43 -- 52540_endn 50447_endc_99999 INPDB CPL Translation proteins--Initiation factor IF2/eIF5b, domain 3-- 54747_46906_ 54747_46906_ A_16 B_101 E_70 4_2_2 187 A_16 B_102 E_73 --A_18 B_103 E_73 -- endn_99999 endc_99999 INPDB CPL Ribosomal protein L11, N-terminal domain--Ribosomal protein L11, C-terminal domain-- 56176_55103_ 56176_55103_ A_28 B_229 E_80 8_3_5 337 A_43 B_454 E_248 --A_31 B_249 E_105 -- endn_52343_99999 52540_46548_endc_99999_54862 INPDB CPL FAD-binding domain--FAD-linked oxidases, C-terminal domain-- 55785_55785_ 55785_55785_ A_92 B_336 E_70 32_18_14 498 A_168 B_1284 E_394 --A_168 B_1284 E_394 -- endn_47473_47459_55594_46579_55781_52172_55785_46966_53335_52374_51735_64501_54631_81606_49879_53850_99999 52540_48452_48283_endc_47384_55073_49758_47661_49785_55781_56507_55785_99999_55874 NOTPDB RPT PYP-like sensor domain (PAS domain)--PYP-like sensor domain (PAS domain)-- 69287_69737_ 69287_69737_ A_1 B_31 E_1 5_3_2 33 A_1 B_36 E_3 --A_1 B_35 E_20 -- endn_99999_55729 endc_99999 INPDB CPL Urease metallochaperone UreE, N-terminal domain--Urease metallochaperone UreE, C-terminal domain-- 81296_51445_ 81296_51445_ A_6 B_133 E_20 7_4_3 159 A_40 B_404 E_1207 --A_89 B_1646 E_1474 -- 51690_endn_81296_99999 endc_51011_99999 INPDB CPL E set domains--(Trans)glycosidases-- 56059_52009_ 56059_52009_ A_20 B_59 E_4 6_2_4 83 A_192 B_1104 E_490 --A_27 B_221 E_13 -- endn_99999 53697_51621_endc_99999 INPDB CPL Glutathione synthetase ATP-binding domain-like--Phosphohistidine domain-- 53067_53067_ 53067_53067_ A_41 B_772 E_722 22_14_8 1535 A_176 B_1667 E_1029 --A_176 B_1667 E_1029 -- 53067_47113_81383_53335_endn_50978_53756_82317_52058_54285_46785_56112_46689_99999 53067_51658_56778_47473_endc_48439_64356_99999 INPDB RPT Actin-like ATPase domain--Actin-like ATPase domain-- 54637_54637_ 54637_54637_ A_5 B_73 E_60 7_3_4 138 A_51 B_906 E_213 --A_51 B_906 E_213 -- 51206_endn_99999 54637_55961_endc_99999 INPDB RPT Thioesterase/thiol ester dehydrase-isomerase--Thioesterase/thiol ester dehydrase-isomerase-- 54814_54814_ 54814_54814_ A_16 B_97 E_1 8_3_5 114 A_82 B_390 E_98 --A_82 B_390 E_98 -- 50249_endn_99999 56281_47794_endc_47789_99999 INPDB RPT Prokaryotic type KH domain (pKH-domain)--Prokaryotic type KH domain (pKH-domain)-- 49785_49303_ 49785_49303_ A_1 B_80 E_20 8_6_2 101 A_10 B_366 E_724 --A_2 B_88 E_38 -- endn_49785_49899_56988_75005_99999 51445_99999 INPDB CPL Galactose-binding domain-like--beta-Galactosidase/glucuronidase domain-- 51230_51230_ 51230_51230_ A_1 B_134 E_9 13_3_10 144 A_35 B_1330 E_195 --A_35 B_1330 E_195 -- 51230_endn_99999 51230_56954_49373_54680_endc_75604_47005_50692_51261_99999 NOTPDB RPT Single hybrid motif--Single hybrid motif-- 81333_81333_ 81333_81333_ A_7 B_11 E_61 7_3_4 79 A_21 B_111 E_114 --A_21 B_111 E_114 -- endn_81333_99999 50965_endc_81333_99999 NOTPDB RPT F1F0 ATP synthase subunit C--F1F0 ATP synthase subunit C-- 55186_55681_ 55186_55681_ A_5 B_101 E_27 8_3_5 133 A_42 B_237 E_81 --A_205 B_1250 E_450 -- endn_81271_99999 63393_52954_endc_57802_99999 INPDB CPL Threonyl-tRNA synthetase (ThrRS), second 'additional' domain--Class II aaRS and biotin synthetases-- 55797_55797_ 55797_55797_ A_1 B_2 E_10 6_3_3 13 A_2 B_67 E_342 --A_2 B_67 E_342 -- endn_55797_99999 55797_endc_56112 NOTPDB RPT PR-1-like--PR-1-like-- 53218_63867_ 53218_63867_ A_13 B_55 E_21 7_3_4 89 A_63 B_253 E_54 --A_13 B_59 E_22 -- endn_63882_99999 endc_53218_99999_53850 NOTPDB CPL Molybdenum cofactor biosynthesis proteins--Molybdenum cofactor biosynthesis protein MoeA, C-terminal domain-- 51905_51735_ 51905_51735_ A_20 B_135 E_50 13_6_7 205 A_358 B_2910 E_1243 --A_993 B_8798 E_3827 -- 51230_endn_51395_51735_52507_99999 52283_47576_51419_51735_endc_48179_99999 NOTPDB CPL FAD/NAD(P)-binding domain--NAD(P)-binding Rossmann-fold domains-- 55486_55486_ 55486_55486_ A_3 B_25 E_29 9_4_5 57 A_64 B_735 E_1617 --A_64 B_735 E_1617 -- endn_49899_48452_99999 51101_57552_endc_48439_99999 NOTPDB RPT Metalloproteases ("zincins"), catalytic domain--Metalloproteases ("zincins"), catalytic domain-- 54862_51905_ 54862_51905_ A_3 B_2 E_4 5_2_3 9 A_411 B_743 E_103 --A_358 B_2910 E_1243 -- endn_99999 endc_54862_99999 NOTPDB CPL 4Fe-4S ferredoxins--FAD/NAD(P)-binding domain-- 50249_46785_ 50249_46785_ A_2 B_4 E_16 4_3_1 22 A_390 B_2734 E_1438 --A_1241 B_7979 E_2143 -- 50249_endn_99999 endc NOTPDB CPL Nucleic acid-binding proteins--"Winged helix" DNA-binding domain-- 48726_48726_ 48726_48726_ A_1 B_1 E_1834 36_25_11 1836 A_14 B_78 E_4071 --A_14 B_78 E_4071 -- 56436_57610_endn_57095_57184_47473_57535_49265_57196_52047_82671_54211_48726_52058_56112_54975_53067_53254_47769_50729_51905_64501_47986_99999_48350 50969_56784_endc_64501_82895_49265_57625_52129_48726_99999_56112 INPDB RPT Immunoglobulin--Immunoglobulin-- 56300_55816_ 56300_55816_ A_5 B_118 E_27 11_3_8 150 A_170 B_837 E_750 --A_5 B_129 E_30 -- endn_55816_99999 50969_51126_56300_55816_endc_50998_51120_99999 INPDB CPL Metallo-dependent phosphatases--5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain-- 53756_53756_ 53756_53756_ A_3 B_17 E_10 9_5_4 30 A_262 B_1575 E_1122 --A_262 B_1575 E_1122 -- 53335_endn_53756_48452_49417 53335_53756_endc_99999 NOTPDB RPT UDP-Glycosyltransferase/glycogen phosphorylase--UDP-Glycosyltransferase/glycogen phosphorylase-- 54593_54593_ 54593_54593_ A_7 B_127 E_42 10_7_3 176 A_36 B_950 E_142 --A_36 B_950 E_142 -- 51658_endn_56534_54236_52374_54593_99999 54593_endc_99999 INPDB RPT Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase--Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase-- 53223_51735_ 53223_51735_ A_56 B_439 E_106 13_9_4 601 A_61 B_487 E_172 --A_993 B_8798 E_3827 -- 51569_55021_endn_47446_74653_47175_48600_57802_99999 52540_55136_endc_99999 INPDB CPL Aminoacid dehydrogenase-like, N-terminal domain--NAD(P)-binding Rossmann-fold domains-- 52540_52540_ 52540_52540_ A_484 B_3183 E_2403 158_102_56 6070 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- 51045_56349_75181_46548_49417_81923_55729_50353_63748_56563_54928_50249_57903_52172_51445_56024_53335_56784_48695_51735_52821_47240_46988_53448_49785_48403_56425_47353_48334_63393_52210_endn_50978_54826_48371_47571_57802_54862_52799_54791_51998_50615_47576_52540_82051_50692_53383_47610_53850_52113_47364_47616_57701_52980_48452_54909_47473_54585_82708_50084_54111_54768_47836_52440_46785_56112_57850_81698_47220_57783_47986_53822_55248_49879_47370_99999_55608_54736_52777_56731_56553_50998_46934_53795_51182_57716_49373_52058_46689_54160_56300_47954_51294_57756_50923_54236_55073_57938_47413_56091_55186_52200 54637_50331_53659_81296_52980_48452_50084_54585_82708_52402_48439_82653_52047_48295_56672_52440_47781_46785_54984_46894_57783_endc_46600_52467_51101_47175_47370_99999_63393_48173_54913_56712_48371_53300_49265_53955_53795_47681_52058_47576_75553_48557_48576_52540_56849_53271_81886_50729_57774_48019_53383_81271_47090_53474_48340_54814 INPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 52467_52518_ 52467_52518_ A_40 B_288 E_61 8_3_5 389 A_132 B_640 E_265 --A_239 B_1128 E_328 -- endn_52518_99999 63393_52518_51735_endc_99999 INPDB CPL DHS-like NAD/FAD-binding domain--Thiamin diphosphate-binding fold (THDP-binding)-- 47644_52242_ 47644_52242_ A_19 B_52 E_13 11_6_5 84 A_19 B_54 E_14 --A_62 B_169 E_35 -- endn_46458_51717_51726_46955_99999 46458_51726_endc_99999_56507 INPDB CPL Methionine synthase domain--Cobalamin (vitamin B12)-binding domain-- 50960_53474_ 50960_53474_ A_9 B_41 E_19 4_2_2 69 A_34 B_192 E_75 --A_141 B_2949 E_2909 -- endn_99999 endc_99999 NOTPDB CPL TolB, C-terminal domain--alpha/beta-Hydrolases-- 52954_64586_ 52954_64586_ A_16 B_17 E_19 3_2_1 52 A_75 B_353 E_158 --A_16 B_17 E_21 -- 55681_endn endc INPDB CPL Anticodon-binding domain of Class II aaRS--C-terminal domain of ProRS-- 55945_48150_ 55945_48150_ A_5 B_27 E_14 5_3_2 46 A_33 B_39 E_74 --A_68 B_400 E_107 -- endn_46689_99999 endc_99999 INPDB CPL TATA-box binding protein-like--DNA-glycosylase-- 63737_55486_ 63737_55486_ A_11 B_82 E_188 13_4_9 281 A_11 B_85 E_209 --A_64 B_735 E_1617 -- 53335_endn_52425_99999 49590_48371_49611_endc_56322_54616_53474_55961_99999 INPDB CPL Leukotriene A4 hydrolase N-terminal domain--Metalloproteases ("zincins"), catalytic domain-- 52009_51621_ 52009_51621_ A_23 B_171 E_4 6_4_2 198 A_27 B_221 E_13 --A_75 B_609 E_182 -- endn_56059_47831_99999 55804_endc INPDB CPL Phosphohistidine domain--Phosphoenolpyruvate/pyruvate domain-- 52172_47226_ 52172_47226_ A_1 B_107 E_1 7_4_3 109 A_85 B_3166 E_241 --A_9 B_246 E_33 -- endn_52172_99999_55874 47226_endc_99999 NOTPDB CPL CheY-like--Histidine-containing phosphotransfer domain, HPT domain-- 46955_52540_ 46955_52540_ A_1 B_3 E_3 5_2_3 7 A_55 B_784 E_148 --A_2129 B_14320 E_12913 -- endn_99999 55129_endc_99999 NOTPDB CPL Putative DNA-binding domain--P-loop containing nucleotide triphosphate hydrolases-- 53041_47807_ 53041_47807_ A_17 B_123 E_60 9_4_5 200 A_60 B_294 E_160 --A_34 B_131 E_87 -- 54427_endn_52343_99999 54160_56672_endc_53098_99999 INPDB CPL Resolvase-like--5' to 3' exonuclease, C-terminal subdomain-- 49452_53474_ 49452_53474_ A_1 B_2 E_1 3_2_1 4 A_3 B_19 E_48 --A_141 B_2949 E_2909 -- endn_99999 endc NOTPDB CPL Starch-binding domain--alpha/beta-Hydrolases-- 52283_51735_ 52283_51735_ A_52 B_368 E_160 14_7_7 580 A_53 B_465 E_206 --A_993 B_8798 E_3827 -- 53383_endn_52283_52768_51735_56214_99999 51206_55021_52283_51905_51735_endc_99999 INPDB CPL Formate/glycerate dehydrogenase catalytic domain-like--NAD(P)-binding Rossmann-fold domains-- 53383_53335_ 53383_53335_ A_2 B_3 E_2 4_1_3 7 A_367 B_2974 E_1139 --A_733 B_3918 E_2070 -- endn endc_46785_99999 NOTPDB CPL PLP-dependent transferases--S-adenosyl-L-methionine-dependent methyltransferases-- 52021_52317_ 52021_52317_ A_14 B_87 E_24 6_4_2 125 A_14 B_93 E_26 --A_204 B_1244 E_262 -- endn_55331_47473_99999 52440_endc INPDB CPL Carbamoyl phosphate synthetase, small subunit N-terminal domain--Class I glutamine amidotransferase-like-- 53067_52540_ 53067_52540_ A_1 B_1 E_2 5_2_3 4 A_176 B_1667 E_1029 --A_2129 B_14320 E_12913 -- endn_99999 46626_81296_endc NOTPDB CPL Actin-like ATPase domain--P-loop containing nucleotide triphosphate hydrolases-- 53850_53850_ 53850_53850_ A_2 B_37 E_18 12_6_6 57 A_257 B_5627 E_740 --A_257 B_5627 E_740 -- 51569_endn_81324_53850_55785_99999 47384_endc_51445_53850_55785_99999 INPDB RPT Periplasmic binding protein-like II--Periplasmic binding protein-like II-- 52374_52540_ 52374_52540_ A_2 B_20 E_14 5_4_1 36 A_247 B_1540 E_642 --A_2129 B_14320 E_12913 -- 50800_47413_endn_99999 endc INPDB CPL Nucleotidylyl transferase--P-loop containing nucleotide triphosphate hydrolases-- 54292_54862_ 54292_54862_ A_5 B_57 E_15 4_2_2 77 A_44 B_565 E_187 --A_411 B_743 E_103 -- endn_99999 53706_53920 INPDB CPL 2Fe-2S ferredoxin-like--4Fe-4S ferredoxins-- 57783_57783_ 57783_57783_ A_21 B_58 E_37 10_5_5 116 A_193 B_620 E_393 --A_193 B_620 E_393 -- endn_56712_57783_99999_57850 57667_55821_57783_endc_99999 INPDB RPT Zinc beta-ribbon--Zinc beta-ribbon-- 48371_48371_ 48371_48371_ A_1 B_6 E_103 18_8_10 110 A_73 B_255 E_3951 --A_73 B_255 E_3951 -- 46626_52540_52047_48425_endn_48403_48371_99999 52540_56300_48452_46557_48371_endc_54534_49562_48431_99999 INPDB RPT ARM repeat--ARM repeat-- 55608_52540_ 55608_52540_ A_5 B_2 E_2 12_5_7 9 A_42 B_71 E_32 --A_2129 B_14320 E_12913 -- 51294_endn_51905_55608_99999 52540_47917_50447_endc_48310_48019_99999 NOTPDB CPL Homing endonucleases--P-loop containing nucleotide triphosphate hydrolases-- 54893_57825_ 54893_57825_ A_16 B_17 E_1 3_2_1 34 A_16 B_17 E_7 --A_16 B_21 E_30 -- endn_53671 endc INPDB CPL Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain--Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain-- 51556_51338_ 51556_51338_ A_18 B_111 E_66 8_5_3 195 A_183 B_1070 E_385 --A_82 B_584 E_154 -- endn_52096_51338_53671_99999 endc_53187_99999 INPDB CPL Metallo-dependent hydrolases--Composite domain of metallo-dependent hydrolases-- 52156_50447_ 52156_50447_ A_17 B_72 E_36 5_3_2 125 A_17 B_103 E_43 --A_102 B_772 E_432 -- 52540_endn_50447 endc_99999 INPDB CPL Initiation factor IF2/eIF5b, domain 3--Translation proteins-- 55874_54211_ 55874_54211_ A_9 B_241 E_75 11_3_8 325 A_178 B_2970 E_398 --A_200 B_1096 E_669 -- endn_82199_99999 55205_51294_53383_56719_endc_51679_53850_99999 INPDB CPL ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase--Ribosomal protein S5 domain 2-like-- 54292_47741_ 54292_47741_ A_8 B_95 E_56 11_4_7 159 A_44 B_565 E_187 --A_8 B_97 E_63 -- 55447_endn_56003_99999 46626_56176_54665_55961_53218_endc_99999 INPDB CPL 2Fe-2S ferredoxin-like--CO dehydrogenase ISP C-domain like-- 53335_53335_ 53335_53335_ A_21 B_107 E_136 13_7_6 264 A_733 B_3918 E_2070 --A_733 B_3918 E_2070 -- 48013_53335_endn_57467_75604_46785_99999 50249_53335_52777_51905_endc_99999 NOTPDB RPT S-adenosyl-L-methionine-dependent methyltransferases--S-adenosyl-L-methionine-dependent methyltransferases-- 46785_55681_ 46785_55681_ A_11 B_42 E_1 6_4_2 54 A_1241 B_7979 E_2143 --A_205 B_1250 E_450 -- endn_46785_50814_99999 50037_endc INPDB CPL "Winged helix" DNA-binding domain--Class II aaRS and biotin synthetases-- 55781_55781_ 55781_55781_ A_1 B_57 E_45 17_7_10 103 A_54 B_1030 E_131 --A_54 B_1030 E_131 -- endn_55781_81606_52172_46785_55785_99999 52540_endc_47384_55073_48547_55781_81606_55874_99999_55785 INPDB RPT GAF domain-like--GAF domain-like-- 54416_49998_ 54416_49998_ A_1 B_3 E_20 7_3_4 24 A_1 B_40 E_61 --A_2 B_4 E_49 -- endn_54416_99999 49998_endc_51695_99999 INPDB CPL Copper amine oxidase, domains 1 and 2--Copper amine oxidase, domain 3 (catalytic)-- 47323_50249_ 47323_50249_ A_11 B_49 E_1 4_2_2 61 A_100 B_688 E_246 --A_390 B_2734 E_1438 -- endn_52374 endc_99999 NOTPDB CPL Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases--Nucleic acid-binding proteins-- 63411_63411_ 63411_63411_ A_2 B_183 E_116 9_5_4 301 A_9 B_281 E_224 --A_9 B_281 E_224 -- 63411_endn_49749_53098_99999 63411_50729_endc_99999 INPDB RPT LuxS/MPP-like metallohydrolase--LuxS/MPP-like metallohydrolase-- 52540_81296_ 52540_81296_ A_2 B_38 E_4 7_4_3 44 A_2129 B_14320 E_12913 --A_40 B_404 E_1207 -- 53067_52540_endn_99999 52540_48403_endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--E set domains-- 48452_48439_ 48452_48439_ A_8 B_11 E_114 15_7_8 133 A_146 B_1937 E_3442 --A_48 B_249 E_670 -- 49695_54001_endn_54826_48452_48439_99999 52540_54928_56019_48452_57501_endc_48439_99999 NOTPDB CPL TPR-like--Protein prenylyltransferase-- 54211_55666_ 54211_55666_ A_29 B_152 E_53 11_5_6 234 A_200 B_1096 E_669 --A_29 B_159 E_70 -- 54791_55666_endn_46915_99999 50249_54211_52972_endc_46915_99999 INPDB CPL Ribosomal protein S5 domain 2-like--Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5-- 48179_48179_ 48179_48179_ A_15 B_78 E_31 5_3_2 124 A_71 B_674 E_226 --A_71 B_674 E_226 -- endn_52096_51735 52096_endc NOTPDB RPT 6-phosphogluconate dehydrogenase C-terminal domain-like--6-phosphogluconate dehydrogenase C-terminal domain-like-- 53474_52540_ 53474_52540_ A_1 B_2 E_1 5_2_3 4 A_141 B_2949 E_2909 --A_2129 B_14320 E_12913 -- endn_99999 53795_endc_99999 NOTPDB CPL alpha/beta-Hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 55120_55120_ 55120_55120_ A_29 B_318 E_116 14_7_7 463 A_48 B_598 E_185 --A_48 B_598 E_185 -- endn_46579_55174_53474_56672_81624_99999 54928_51366_52799_53927_50044_endc_99999 INPDB RPT Pseudouridine synthase--Pseudouridine synthase-- 54862_53706_ 54862_53706_ A_5 B_55 E_17 5_3_2 77 A_411 B_743 E_103 --A_63 B_328 E_38 -- endn_54292_51971 endc_50692 NOTPDB CPL 4Fe-4S ferredoxins--Formate dehydrogenase/DMSO reductase, domains 1-3-- 47005_52777_ 47005_52777_ A_5 B_180 E_44 6_4_2 229 A_6 B_185 E_52 --A_10 B_418 E_328 -- 51230_endn_47005_99999 52777_endc NOTPDB CPL Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex--CoA-dependent acyltransferases-- 52440_56059_ 52440_56059_ A_63 B_630 E_149 17_9_8 842 A_71 B_698 E_210 --A_192 B_1104 E_490 -- 51230_endn_48108_53732_52317_48670_52440_99999_53244 51230_51735_endc_48108_51246_52440_52335_99999 INPDB CPL PreATP-grasp domain--Glutathione synthetase ATP-binding domain-like-- 50969_50998_ 50969_50998_ A_1 B_2 E_1 5_3_2 4 A_24 B_218 E_336 --A_73 B_392 E_284 -- endn_48726_99999 endc_99999 NOTPDB CPL YVTN repeat-like/Quinoprotein amine dehydrogenase--Quinoprotein alcohol dehydrogenase-like-- 53335_51735_ 53335_51735_ A_1 B_2 E_3 6_2_4 6 A_733 B_3918 E_2070 --A_993 B_8798 E_3827 -- endn_99999 53474_endc_48179_99999 NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--NAD(P)-binding Rossmann-fold domains-- 46915_54211_ 46915_54211_ A_2 B_89 E_19 6_2_4 110 A_2 B_92 E_20 --A_200 B_1096 E_669 -- endn_55666 54791_55666_endc_99999 INPDB CPL Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3--Ribosomal protein S5 domain 2-like-- 55781_55785_ 55781_55785_ A_19 B_94 E_3 17_7_10 116 A_54 B_1030 E_131 --A_168 B_1284 E_394 -- endn_55781_52172_48452_46955_99999_55785 52540_46894_endc_47384_55073_55781_55890_99999_55874_55785 NOTPDB CPL GAF domain-like--PYP-like sensor domain (PAS domain)-- 56214_56214_ 56214_56214_ A_2 B_64 E_21 5_3_2 87 A_3 B_154 E_35 --A_3 B_154 E_35 -- endn_53474_99999 endc_99999 INPDB RPT 4'-phosphopantetheinyl transferase--4'-phosphopantetheinyl transferase-- 82693_82866_ 82693_82866_ A_1 B_73 E_2 5_3_2 76 A_3 B_362 E_31 --A_45 B_639 E_196 -- 82714_99999_82693 endc_99999 INPDB CPL Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains--Multidrug efflux transporter AcrB transmembrane domain-- 52540_53795_ 52540_53795_ A_10 B_95 E_36 30_22_8 141 A_2129 B_14320 E_12913 --A_421 B_3843 E_485 -- 63393_endn_53927_57701_46548_50156_57802_54862_47661_57716_50615_46785_57850_52540_57770_54334_51735_48695_57938_47986_53474_99999 52540_56534_endc_54862_52047_53795_52058_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--PEP carboxykinase-like-- 51735_75615_ 51735_75615_ A_8 B_21 E_3 3_1_2 32 A_993 B_8798 E_3827 --A_12 B_24 E_6 -- endn endc_99999 INPDB CPL NAD(P)-binding Rossmann-fold domains--Bifunctional dehydrogenase/ferrochelatase Met8p, dimerisation and C-terminal domains-- 51971_51735_ 51971_51735_ A_3 B_9 E_4 6_4_2 16 A_47 B_404 E_155 --A_993 B_8798 E_3827 -- endn_51395_54862_99999 endc_99999 NOTPDB CPL Nucleotide-binding domain--NAD(P)-binding Rossmann-fold domains-- 55486_54631_ 55486_54631_ A_1 B_1 E_4 3_1_2 6 A_64 B_735 E_1617 --A_209 B_782 E_239 -- endn 54631_55103 NOTPDB CPL Metalloproteases ("zincins"), catalytic domain--CBS-domain-- 54814_54791_ 54814_54791_ A_2 B_1 E_22 6_3_3 25 A_82 B_390 E_98 --A_38 B_130 E_562 -- 50249_54791_99999 54791_endc_99999 NOTPDB CPL Prokaryotic type KH domain (pKH-domain)--Eukaryotic type KH-domain (eKH-domain)-- 46689_46689_ 46689_46689_ A_1 B_749 E_543 40_21_19 1293 A_246 B_4125 E_4002 --A_246 B_4125 E_4002 -- 52113_51215_endn_52768_50353_51182_56003_52317_52172_46785_55785_46689_52540_51197_47769_51905_47226_54427_57884_53822_99999 48283_47473_56529_55729_51182_55945_46785_46689_53155_56024_46894_57667_55136_47060_endc_53098_49785_53807_99999 INPDB RPT Homeodomain-like--Homeodomain-like-- 81340_54631_ 81340_54631_ A_9 B_13 E_5 4_2_2 27 A_14 B_111 E_141 --A_209 B_782 E_239 -- endn_99999 54631_99999 NOTPDB CPL Clc chloride channel--CBS-domain-- 54980_54211_ 54980_54211_ A_17 B_145 E_98 6_3_3 260 A_28 B_403 E_157 --A_200 B_1096 E_669 -- 52540_endn_50447 54980_endc_99999 INPDB CPL EF-G/eEF-2 domains III and V--Ribosomal protein S5 domain 2-like-- 46689_46785_ 46689_46785_ A_1 B_14 E_13 9_4_5 28 A_246 B_4125 E_4002 --A_1241 B_7979 E_2143 -- endn_46894_99999_46689 52512_63520_endc_53098_99999 NOTPDB CPL Homeodomain-like--"Winged helix" DNA-binding domain-- 54211_54980_ 54211_54980_ A_15 B_145 E_83 5_3_2 243 A_200 B_1096 E_669 --A_28 B_403 E_157 -- endn_54980_99999 endc_99999 INPDB CPL Ribosomal protein S5 domain 2-like--EF-G/eEF-2 domains III and V-- 56281_52218_ 56281_52218_ A_18 B_39 E_1 5_2_3 58 A_273 B_950 E_318 --A_110 B_706 E_157 -- endn_99999 50475_endc_57802 INPDB CPL Metallo-hydrolase/oxidoreductase--Flavoproteins-- 53681_53681_ 53681_53681_ A_10 B_132 E_5 7_3_4 147 A_14 B_167 E_17 --A_14 B_167 E_17 -- 63992_endn_99999 53067_82771_endc_99999 INPDB RPT Aspartate/glutamate racemase--Aspartate/glutamate racemase-- 55486_50156_ 55486_50156_ A_1 B_17 E_2 5_2_3 20 A_64 B_735 E_1617 --A_28 B_534 E_1380 -- endn_99999 49493_endc_99999 NOTPDB CPL Metalloproteases ("zincins"), catalytic domain--PDZ domain-like-- 55979_55979_ 55979_55979_ A_21 B_103 E_37 8_4_4 161 A_31 B_141 E_99 --A_31 B_141 E_99 -- endn_46955_99999_55979 endc_51445_99999_55979 INPDB RPT DNA clamp--DNA clamp-- 51735_51735_ 51735_51735_ A_21 B_222 E_69 26_15_11 312 A_993 B_8798 E_3827 --A_993 B_8798 E_3827 -- 69765_50129_endn_53328_52283_81324_51905_51735_48179_53623_52440_47336_48600_99999_52507 52283_51735_endc_48179_56796_53098_53474_47336_56327_51971_99999 NOTPDB RPT NAD(P)-binding Rossmann-fold domains--NAD(P)-binding Rossmann-fold domains-- 53738_55957_ 53738_55957_ A_32 B_244 E_67 7_5_2 343 A_38 B_288 E_93 --A_32 B_251 E_80 -- 52242_53738_endn_99999_55931 endc_99999 INPDB CPL Phosphoglucomutase, first 3 domains--Phosphoglucomutase, C-terminal domain-- 50978_50998_ 50978_50998_ A_1 B_1 E_5 6_2_4 7 A_7 B_101 E_3576 --A_73 B_392 E_284 -- 50969_99999 52540_51645_endc_99999 NOTPDB CPL WD40-repeat--Quinoprotein alcohol dehydrogenase-like-- 52540_52317_ 52540_52317_ A_42 B_169 E_34 6_3_3 245 A_2129 B_14320 E_12913 --A_204 B_1244 E_262 -- 53383_endn_99999 52540_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Class I glutamine amidotransferase-like-- 55681_50037_ 55681_50037_ A_10 B_74 E_1 4_2_2 85 A_205 B_1250 E_450 --A_36 B_160 E_9 -- endn_46785 53067_endc INPDB CPL Class II aaRS and biotin synthetases--C-terminal domain of transcriptional repressors-- 56712_57783_ 56712_57783_ A_9 B_67 E_2 7_1_6 78 A_33 B_243 E_47 --A_193 B_620 E_393 -- endn 50249_63393_56672_57783_endc_99999 NOTPDB CPL Prokaryotic type I DNA topoisomerase--Zinc beta-ribbon-- 50677_52374_ 50677_52374_ A_53 B_296 E_121 6_2_4 470 A_53 B_299 E_143 --A_247 B_1540 E_642 -- endn_99999 47323_48557_endc_99999 INPDB CPL ValRS/IleRS/LeuRS editing domain--Nucleotidylyl transferase-- 50249_50104_ 50249_50104_ A_17 B_97 E_41 5_3_2 155 A_390 B_2734 E_1438 --A_89 B_444 E_354 -- 63451_endn_99999 endc_99999 INPDB CPL Nucleic acid-binding proteins--Translation proteins SH3-like domain-- 48179_52413_ 48179_52413_ A_21 B_131 E_24 5_2_3 176 A_71 B_674 E_226 --A_23 B_134 E_35 -- endn_51735 51735_endc_99999 INPDB CPL 6-phosphogluconate dehydrogenase C-terminal domain-like--UDP-glucose dehydrogenase (UDPGDH), C-terminal (UDP-binding) domain-- 53092_55920_ 53092_55920_ A_19 B_140 E_42 7_5_2 201 A_22 B_159 E_79 --A_50 B_337 E_200 -- endn_53092_54826_51430_99999 endc_99999 INPDB CPL Creatinase/prolidase N-terminal domain--Creatinase/aminopeptidase-- 56672_53098_ 56672_53098_ A_2 B_1 E_303 25_15_10 306 A_66 B_378 E_3164 --A_290 B_2494 E_2335 -- 54001_47220_endn_57756_54236_47027_53098_50630_56219_56672_47353_46785_81730_46689_99999 54654_47473_endc_57938_53098_52047_51569_46919_56672_99999 INPDB CPL DNA/RNA polymerases--Ribonuclease H-like-- 52096_52096_ 52096_52096_ A_8 B_115 E_22 11_6_5 145 A_96 B_1208 E_331 --A_96 B_1208 E_331 -- 52210_52096_endn_54665_51679_99999 52096_51604_endc_55729_99999 NOTPDB RPT ClpP/crotonase--ClpP/crotonase-- 46785_53850_ 46785_53850_ A_10 B_1888 E_74 10_5_5 1972 A_1241 B_7979 E_2143 --A_257 B_5627 E_740 -- 53649_endn_51735_46785_99999 53383_endc_47240_53955_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Periplasmic binding protein-like II-- 46785_52540_ 46785_52540_ A_12 B_65 E_2 11_4_7 79 A_1241 B_7979 E_2143 --A_2129 B_14320 E_12913 -- 52540_endn_46785_99999 63393_52540_53795_48452_endc_63520_99999 NOTPDB CPL "Winged helix" DNA-binding domain--P-loop containing nucleotide triphosphate hydrolases-- 53316_53316_ 53316_53316_ A_7 B_79 E_30 7_4_3 116 A_16 B_229 E_39 --A_16 B_229 E_39 -- endn_48662_51556_99999 endc_55729_99999 INPDB RPT CoA transferase--CoA transferase-- 52518_52518_ 52518_52518_ A_2 B_366 E_93 7_3_4 461 A_239 B_1128 E_328 --A_239 B_1128 E_328 -- 52467_endn_99999 52922_52777_endc_99999 INPDB RPT Thiamin diphosphate-binding fold (THDP-binding)--Thiamin diphosphate-binding fold (THDP-binding)-- 48029_54631_ 48029_54631_ A_1 B_73 E_1 7_5_2 75 A_4 B_170 E_39 --A_209 B_782 E_239 -- 50346_53901_endn_47240_99999 endc_99999 NOTPDB CPL FliG--CBS-domain-- 53639_53639_ 53639_53639_ A_1 B_3 E_1 5_2_3 5 A_18 B_151 E_81 --A_18 B_151 E_81 -- endn_99999 endc_51735_99999 NOTPDB RPT AraD-like aldolase/epimerase--AraD-like aldolase/epimerase-- 55347_51735_ 55347_51735_ A_17 B_12 E_5 4_2_2 34 A_119 B_836 E_588 --A_993 B_8798 E_3827 -- endn_51735 endc_99999 INPDB CPL Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain--NAD(P)-binding Rossmann-fold domains-- 82861_50182_ 82861_50182_ A_37 B_178 E_7 9_5_4 222 A_40 B_181 E_12 --A_84 B_323 E_404 -- 47986_endn_47473_48019_99999 82689_55307_endc_99999 INPDB CPL Mechanosensitive channel protein MscS (YggB), transmembrane region--Sm-like ribonucleoproteins-- 55729_52540_ 55729_52540_ A_1 B_4 E_1 7_3_4 6 A_217 B_2438 E_800 --A_2129 B_14320 E_12913 -- endn_51306_99999 52540_endc_99999_55729 NOTPDB CPL Acyl-CoA N-acyltransferases (Nat)--P-loop containing nucleotide triphosphate hydrolases-- 53187_55031_ 53187_55031_ A_37 B_456 E_86 11_8_3 579 A_105 B_1042 E_648 --A_39 B_462 E_92 -- endn_50978_56784_49447_53822_50729_51338_99999 51126_endc_99999 INPDB CPL Zn-dependent exopeptidases--Bacterial exopeptidase dimerisation domain-- 52374_50715_ 52374_50715_ A_17 B_35 E_34 7_4_3 86 A_247 B_1540 E_642 --A_17 B_116 E_46 -- endn_52518_47616_99999 47060_endc_99999 INPDB CPL Nucleotidylyl transferase--Ribosomal protein L25-like-- 52374_47323_ 52374_47323_ A_75 B_399 E_143 14_7_7 617 A_247 B_1540 E_642 --A_100 B_688 E_246 -- 57770_50677_53383_endn_47616_55190_99999 47323_50249_69065_46589_endc_47240_99999 INPDB CPL Nucleotidylyl transferase--Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases-- 55326_56042_ 55326_56042_ A_90 B_226 E_42 9_5_4 358 A_92 B_231 E_44 --A_93 B_263 E_63 -- 51246_endn_56042_47060_99999 55326_53328_endc_99999 INPDB CPL Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain--Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain-- 52425_48173_ 52425_48173_ A_8 B_49 E_35 5_2_3 92 A_9 B_60 E_58 --A_11 B_75 E_52 -- endn_99999 51905_endc_99999 INPDB CPL Cryptochrome/photolyase, N-terminal domain--Cryptochrome/photolyase FAD-binding domain-- 53383_46785_ 53383_46785_ A_1 B_4 E_2 4_2_2 7 A_367 B_2974 E_1139 --A_1241 B_7979 E_2143 -- endn_50465 endc_99999 NOTPDB CPL PLP-dependent transferases--"Winged helix" DNA-binding domain-- 52540_56672_ 52540_56672_ A_1 B_2 E_1 4_2_2 4 A_2129 B_14320 E_12913 --A_66 B_378 E_3164 -- 52540_99999 56672_endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--DNA/RNA polymerases-- 52540_47917_ 52540_47917_ A_36 B_227 E_95 11_7_4 358 A_2129 B_14320 E_12913 --A_49 B_235 E_120 -- 51230_51294_endn_50615_55608_51261_99999 51230_50615_endc_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--C-terminal domain of alpha and beta subunits of F1 ATP synthase-- 47648_52418_ 47648_52418_ A_24 B_139 E_11 7_4_3 174 A_24 B_152 E_15 --A_27 B_155 E_18 -- endn_52317_50692_99999 54680_endc_99999 INPDB CPL Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain--Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain-- 50447_50465_ 50447_50465_ A_31 B_186 E_153 7_3_4 370 A_102 B_772 E_432 --A_47 B_206 E_195 -- 52540_endn_99999 52540_53383_endc_99999 INPDB CPL Translation proteins--EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain-- 68923_53795_ 68923_53795_ A_8 B_55 E_28 3_2_1 91 A_9 B_60 E_30 --A_421 B_3843 E_485 -- endn_99999 endc INPDB CPL PEP carboxykinase N-terminal domain--PEP carboxykinase-like-- 54814_54821_ 54814_54821_ A_17 B_98 E_20 3_1_2 135 A_82 B_390 E_98 --A_17 B_98 E_22 -- endn endc_99999 INPDB CPL Prokaryotic type KH domain (pKH-domain)--Ribosomal protein S3 C-terminal domain-- 49309_49309_ 49309_49309_ A_5 B_1 E_47 5_3_2 53 A_22 B_24 E_79 --A_22 B_24 E_79 -- endn_54001_99999 endc_99999 INPDB RPT Transglutaminase, two C-terminal domains--Transglutaminase, two C-terminal domains-- 46589_55681_ 46589_55681_ A_13 B_193 E_39 4_2_2 245 A_16 B_318 E_97 --A_205 B_1250 E_450 -- endn_99999 endc_99999 INPDB CPL tRNA-binding arm--Class II aaRS and biotin synthetases-- 54631_51412_ 54631_51412_ A_10 B_87 E_31 4_2_2 128 A_209 B_782 E_239 --A_45 B_354 E_83 -- 54631_99999 endc_99999 INPDB CPL CBS-domain--Inosine monophosphate dehydrogenase (IMPDH)-- 74650_48208_ 74650_48208_ A_3 B_39 E_1 7_3_4 43 A_8 B_214 E_72 --A_67 B_360 E_274 -- endn_56784_99999 49452_56784_endc_99999 INPDB CPL Galactose mutarotase-like--Six-hairpin glycosyltransferases-- 53335_46785_ 53335_46785_ A_2 B_1 E_3 4_2_2 6 A_733 B_3918 E_2070 --A_1241 B_7979 E_2143 -- 53383_endn endc_99999 NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--"Winged helix" DNA-binding domain-- 48239_48239_ 48239_48239_ A_4 B_16 E_35 7_3_4 55 A_29 B_94 E_322 --A_29 B_94 E_322 -- 48239_endn_99999 48239_endc_99999_48576 INPDB RPT Terpenoid cylases/Protein prenyltransferases--Terpenoid cylases/Protein prenyltransferases-- 52540_47266_ 52540_47266_ A_2 B_1 E_2 4_2_2 5 A_2129 B_14320 E_12913 --A_9 B_44 E_321 -- endn_99999 52540_endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--4-helical cytokines-- 55124_56014_ 55124_56014_ A_18 B_83 E_10 9_4_5 111 A_24 B_104 E_14 --A_25 B_194 E_20 -- endn_56014_54862_99999 55124_endc_56014_99999_54862 INPDB CPL Sulfite reductase, domains 1 and 3--Sulfite reductase hemoprotein (SiRHP), domains 2 and 4-- 56176_55447_ 56176_55447_ A_8 B_59 E_45 7_3_4 112 A_43 B_454 E_248 --A_9 B_61 E_46 -- endn_47741_99999 54292_54665_endc_99999 INPDB CPL FAD-binding domain--CO dehydrogenase flavoprotein C-terminal domain-like-- 50615_52540_ 50615_52540_ A_20 B_289 E_69 8_3_5 378 A_38 B_324 E_95 --A_2129 B_14320 E_12913 -- endn_47917_99999 52540_53795_47917_endc_99999 INPDB CPL N-terminal domain of alpha and beta subunits of F1 ATP synthase--P-loop containing nucleotide triphosphate hydrolases-- 51971_51971_ 51971_51971_ A_12 B_97 E_12 10_5_5 121 A_47 B_404 E_155 --A_47 B_404 E_155 -- endn_46548_51905_54862_99999 46548_51395_endc_54862_99999 INPDB RPT Nucleotide-binding domain--Nucleotide-binding domain-- 49265_49265_ 49265_49265_ A_3 B_16 E_944 34_20_14 963 A_23 B_135 E_1734 --A_23 B_135 E_1734 -- 57610_endn_81296_57603_49899_57256_57184_53300_49265_57196_51621_52058_48726_49384_57586_81324_57016_53383_50965_99999 49299_57603_51055_53300_endc_49265_57196_48726_69318_56496_51445_48317_99999_56112 INPDB RPT Fibronectin type III--Fibronectin type III-- 52540_53335_ 52540_53335_ A_2 B_2 E_1 3_1_2 5 A_2129 B_14320 E_12913 --A_733 B_3918 E_2070 -- endn endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--S-adenosyl-L-methionine-dependent methyltransferases-- 55681_52954_ 55681_52954_ A_51 B_254 E_101 12_8_4 406 A_205 B_1250 E_450 --A_75 B_353 E_158 -- 81271_endn_48557_47060_55186_55826_56112_99999 52833_64586_endc_99999 INPDB CPL Class II aaRS and biotin synthetases--Anticodon-binding domain of Class II aaRS-- 57783_55821_ 57783_55821_ A_6 B_11 E_1 6_4_2 18 A_193 B_620 E_393 --A_46 B_268 E_45 -- 57716_57783_99999_54975 endc_99999 NOTPDB CPL Zinc beta-ribbon--YrdC/RibB-- 50969_50969_ 50969_50969_ A_1 B_3 E_4 6_2_4 8 A_24 B_218 E_336 --A_24 B_218 E_336 -- endn_99999 50969_53474_endc_99999 NOTPDB RPT YVTN repeat-like/Quinoprotein amine dehydrogenase--YVTN repeat-like/Quinoprotein amine dehydrogenase-- 51905_51905_ 51905_51905_ A_10 B_34 E_26 11_6_5 70 A_358 B_2910 E_1243 --A_358 B_2910 E_1243 -- 52242_50129_endn_51395_51735_99999 55424_56235_54373_endc_99999 INPDB RPT FAD/NAD(P)-binding domain--FAD/NAD(P)-binding domain-- 56059_52210_ 56059_52210_ A_13 B_72 E_47 5_2_3 132 A_192 B_1104 E_490 --A_60 B_218 E_78 -- endn_99999 51735_endc_99999 INPDB CPL Glutathione synthetase ATP-binding domain-like--Succinyl-CoA synthetase domains-- 52540_53271_ 52540_53271_ A_3 B_2 E_26 7_4_3 31 A_2129 B_14320 E_12913 --A_132 B_838 E_254 -- 52540_endn_51735_99999 56300_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--PRTase-like-- 48452_56112_ 48452_56112_ A_3 B_1 E_2 5_2_3 6 A_146 B_1937 E_3442 --A_114 B_971 E_9319 -- endn_99999 endc_99999_48439 NOTPDB CPL TPR-like--Protein kinase-like (PK-like)-- 49493_49493_ 49493_49493_ A_3 B_74 E_146 6_4_2 223 A_8 B_140 E_172 --A_8 B_140 E_172 -- endn_46565_57938_99999 endc_99999 INPDB RPT HSP40/DnaJ peptide-binding domain--HSP40/DnaJ peptide-binding domain-- 46785_57783_ 46785_57783_ A_1 B_1 E_2 4_1_3 4 A_1241 B_7979 E_2143 --A_193 B_620 E_393 -- endn 57716_endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Zinc beta-ribbon-- 81665_81660_ 81665_81660_ A_4 B_46 E_127 7_3_4 177 A_43 B_361 E_378 --A_16 B_89 E_466 -- endn_81653_99999 56784_endc_47240_99999 INPDB CPL Calcium ATPase, transmembrane domain M--Calcium ATPase, ATP-binding domain N-- 50447_54980_ 50447_54980_ A_17 B_357 E_129 9_4_5 503 A_102 B_772 E_432 --A_28 B_403 E_157 -- 52540_endn_51011_99999 52540_54211_54980_endc_99999 INPDB CPL Translation proteins--EF-G/eEF-2 domains III and V-- 52540_75553_ 52540_75553_ A_1 B_19 E_25 5_3_2 45 A_2129 B_14320 E_12913 --A_11 B_73 E_99 -- 52540_endn_99999 52540_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Smc hinge domain-- 51735_46785_ 51735_46785_ A_3 B_10 E_2 6_2_4 15 A_993 B_8798 E_3827 --A_1241 B_7979 E_2143 -- endn_48452 endc_48179_53850_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--"Winged helix" DNA-binding domain-- 52058_52540_ 52058_52540_ A_1 B_3 E_55 8_5_3 59 A_6 B_143 E_2568 --A_2129 B_14320 E_12913 -- 52047_52540_endn_48403_99999 52540_endc_99999 NOTPDB CPL L domain-like--P-loop containing nucleotide triphosphate hydrolases-- 56053_56053_ 56053_56053_ A_17 B_98 E_65 4_2_2 180 A_18 B_101 E_77 --A_18 B_101 E_77 -- endn_99999 53137_endc INPDB RPT Ribosomal protein L6--Ribosomal protein L6-- 52540_51735_ 52540_51735_ A_1 B_2 E_2 4_1_3 5 A_2129 B_14320 E_12913 --A_993 B_8798 E_3827 -- endn 51604_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--NAD(P)-binding Rossmann-fold domains-- 51621_52935_ 51621_52935_ A_13 B_108 E_61 5_2_3 182 A_75 B_609 E_182 --A_19 B_116 E_66 -- 50800_endn 52009_endc_99999 INPDB CPL Phosphoenolpyruvate/pyruvate domain--Pyruvate kinase, C-terminal domain-- 52540_52980_ 52540_52980_ A_11 B_25 E_1 8_4_4 37 A_2129 B_14320 E_12913 --A_117 B_308 E_46 -- 52540_endn_52200_99999 52540_52047_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Restriction endonuclease-like-- 51735_51971_ 51735_51971_ A_6 B_34 E_3 6_4_2 43 A_993 B_8798 E_3827 --A_47 B_404 E_155 -- endn_51735_52507_99999 endc_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Nucleotide-binding domain-- 53098_56672_ 53098_56672_ A_22 B_104 E_281 19_13_6 407 A_290 B_2494 E_2335 --A_66 B_378 E_3164 -- 54160_endn_57756_48452_49611_50022_53098_47807_50630_56672_53807_47781_99999 56672_48403_69131_endc_53098_99999 INPDB CPL Ribonuclease H-like--DNA/RNA polymerases-- 54197_54197_ 54197_54197_ A_6 B_20 E_15 3_2_1 41 A_38 B_208 E_173 --A_38 B_208 E_173 -- endn_99999 endc INPDB RPT HIT-like--HIT-like-- 52025_53187_ 52025_53187_ A_5 B_11 E_58 6_2_4 74 A_6 B_44 E_200 --A_105 B_1042 E_648 -- endn_99999 47672_50156_endc_99999 INPDB CPL Transferrin receptor ectodomain, apical domain--Zn-dependent exopeptidases-- 51294_55608_ 51294_55608_ A_16 B_5 E_1 11_5_6 22 A_61 B_50 E_53 --A_42 B_71 E_32 -- 52540_56719_endn_51998_99999 52540_47413_56719_51998_55608_99999 INPDB CPL Hedgehog/intein (Hint) domain--Homing endonucleases-- 52467_52467_ 52467_52467_ A_2 B_1 E_1 4_2_2 4 A_132 B_640 E_265 --A_132 B_640 E_265 -- endn_99999 endc_99999 NOTPDB RPT DHS-like NAD/FAD-binding domain--DHS-like NAD/FAD-binding domain-- 52821_52821_ 52821_52821_ A_19 B_95 E_32 9_4_5 146 A_39 B_452 E_298 --A_39 B_452 E_298 -- 56281_endn_52821_99999 52799_endc_52821_55729_99999 INPDB RPT Rhodanese/Cell cycle control phosphatase--Rhodanese/Cell cycle control phosphatase-- 50800_52374_ 50800_52374_ A_7 B_21 E_26 5_3_2 54 A_21 B_142 E_93 --A_247 B_1540 E_642 -- 52540_endn_99999 52540_endc INPDB CPL PK beta-barrel domain-like--Nucleotidylyl transferase-- 63380_63380_ 63380_63380_ A_2 B_85 E_6 4_2_2 93 A_34 B_499 E_327 --A_34 B_499 E_327 -- endn_99999 endc_99999 INPDB RPT Riboflavin synthase domain-like--Riboflavin synthase domain-like-- 53067_56778_ 53067_56778_ A_9 B_142 E_193 8_4_4 344 A_176 B_1667 E_1029 --A_14 B_148 E_238 -- 53067_53383_endn_99999 51126_53300_endc_99999 NOTPDB CPL Actin-like ATPase domain--Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment-- 50249_50249_ 50249_50249_ A_34 B_155 E_184 16_11_5 373 A_390 B_2734 E_1438 --A_390 B_2734 E_1438 -- 52540_50249_endn_81878_57903_57938_46785_54814_57802_47661_99999 50249_64182_endc_46785_99999 INPDB RPT Nucleic acid-binding proteins--Nucleic acid-binding proteins-- 82679_50104_ 82679_50104_ A_7 B_120 E_4 4_3_1 131 A_7 B_128 E_13 --A_89 B_444 E_354 -- endn_82004_99999 endc INPDB CPL N-utilization substance G protein NusG, N-terminal domain--Translation proteins SH3-like domain-- 57783_46689_ 57783_46689_ A_33 B_103 E_1 5_2_3 137 A_193 B_620 E_393 --A_246 B_4125 E_4002 -- endn_99999 49503_endc_99999 NOTPDB CPL Zinc beta-ribbon--Homeodomain-like-- 52833_52833_ 52833_52833_ A_11 B_44 E_237 12_4_8 292 A_220 B_2517 E_2068 --A_220 B_2517 E_2068 -- endn_52833_46565_99999 47616_52833_48371_47933_51905_endc_57889_99999 INPDB RPT Thioredoxin-like--Thioredoxin-like-- 81660_56784_ 81660_56784_ A_10 B_67 E_388 8_5_3 465 A_16 B_89 E_466 --A_230 B_1745 E_1267 -- endn_81660_81653_99999_81665 endc_81665_99999 INPDB CPL Calcium ATPase, ATP-binding domain N--HAD-like-- 54211_56719_ 54211_56719_ A_6 B_121 E_26 4_2_2 153 A_200 B_1096 E_669 --A_12 B_354 E_44 -- 99999_55874 endc_99999 NOTPDB CPL Ribosomal protein S5 domain 2-like--Type II DNA topoisomerase-- 53738_53738_ 53738_53738_ A_35 B_249 E_73 9_6_3 357 A_38 B_288 E_93 --A_38 B_288 E_93 -- 54637_53738_endn_81799_51161_99999 53738_endc_99999 INPDB RPT Phosphoglucomutase, first 3 domains--Phosphoglucomutase, first 3 domains-- 48113_48113_ 48113_48113_ A_2 B_27 E_3 3_2_1 32 A_2 B_55 E_453 --A_2 B_55 E_453 -- endn_99999 endc INPDB RPT Heme-dependent peroxidases--Heme-dependent peroxidases-- 50331_50331_ 50331_50331_ A_22 B_218 E_5 8_5_3 245 A_61 B_521 E_45 --A_61 B_521 E_45 -- 52540_endn_53795_46785_99999 endc_51695_99999 INPDB RPT MOP-like--MOP-like-- 47823_56349_ 47823_56349_ A_24 B_481 E_4 16_11_5 509 A_29 B_507 E_8 --A_59 B_801 E_85 -- 54556_52540_endn_56235_46458_48345_49899_54171_46785_47823_99999 74942_56349_69754_endc_99999 INPDB CPL lambda integrase-like, N-terminal domain--DNA breaking-rejoining enzymes-- 56235_52402_ 56235_52402_ A_17 B_88 E_40 3_1_2 145 A_157 B_611 E_596 --A_350 B_1402 E_436 -- endn endc_99999 INPDB CPL N-terminal nucleophile aminohydrolases (Ntn hydrolases)--Adenine nucleotide alpha hydrolases-like-- 52540_55729_ 52540_55729_ A_8 B_9 E_1 8_6_2 18 A_2129 B_14320 E_12913 --A_217 B_2438 E_800 -- 53335_endn_46894_51604_55729_99999 endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Acyl-CoA N-acyltransferases (Nat)-- 56059_48108_ 56059_48108_ A_14 B_88 E_22 6_3_3 124 A_192 B_1104 E_490 --A_16 B_93 E_27 -- endn_53474_52440 52440_endc_99999 INPDB CPL Glutathione synthetase ATP-binding domain-like--Carbamoyl phosphate synthetase, large subunit connection domain-- 50182_82689_ 50182_82689_ A_32 B_191 E_4 7_3_4 227 A_84 B_323 E_404 --A_35 B_209 E_8 -- endn_82861_99999 51206_53474_endc_99999 INPDB CPL Sm-like ribonucleoproteins--Mechanosensitive channel protein MscS (YggB), C-terminal domain-- 56091_50249_ 56091_50249_ A_20 B_140 E_50 8_5_3 210 A_34 B_180 E_92 --A_390 B_2734 E_1438 -- 52799_endn_56091_99999_55729 endc_47781_99999 INPDB CPL DNA ligase/mRNA capping enzyme, catalytic domain--Nucleic acid-binding proteins-- 52540_48019_ 52540_48019_ A_21 B_207 E_73 10_7_3 301 A_2129 B_14320 E_12913 --A_24 B_335 E_97 -- 50685_52540_47413_51294_endn_55608_99999 52540_endc_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--DNA polymerase III clamp loader subunits, C-terminal domain-- 48371_46785_ 48371_46785_ A_1 B_1 E_1 4_2_2 3 A_73 B_255 E_3951 --A_1241 B_7979 E_2143 -- endn_46774 endc_99999 NOTPDB CPL ARM repeat--"Winged helix" DNA-binding domain-- 55008_55008_ 55008_55008_ A_10 B_37 E_44 8_3_5 91 A_44 B_256 E_222 --A_44 B_256 E_222 -- endn_55008_99999 69203_55008_endc_47240_99999 NOTPDB RPT Metal-binding domain--Metal-binding domain-- 52540_47661_ 52540_47661_ A_1 B_3 E_1 3_1_2 5 A_2129 B_14320 E_12913 --A_6 B_43 E_303 -- endn 75553_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--t-snare proteins-- 52540_50465_ 52540_50465_ A_16 B_2 E_32 4_2_2 50 A_2129 B_14320 E_12913 --A_47 B_206 E_195 -- endn_99999 endc_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain-- 52540_53474_ 52540_53474_ A_1 B_2 E_2 5_3_2 5 A_2129 B_14320 E_12913 --A_141 B_2949 E_2909 -- 52540_endn_99999 endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--alpha/beta-Hydrolases-- 51126_51126_ 51126_51126_ A_17 B_15 E_28 13_6_7 60 A_116 B_481 E_444 --A_116 B_481 E_444 -- 81383_49299_51126_endn_56487_99999 52540_47266_49299_51126_56925_endc_99999 NOTPDB RPT Pectin lyase-like--Pectin lyase-like-- 53795_50331_ 53795_50331_ A_46 B_444 E_5 6_2_4 495 A_421 B_3843 E_485 --A_61 B_521 E_45 -- endn_99999 52540_50331_endc_99999 INPDB CPL PEP carboxykinase-like--MOP-like-- 54665_56003_ 54665_56003_ A_21 B_87 E_56 11_6_5 164 A_21 B_98 E_68 --A_22 B_115 E_81 -- 56176_55447_53901_endn_47741_99999 46626_56176_54292_endc_99999 INPDB CPL CO dehydrogenase molybdoprotein N-domain-like--Molybdemum cofactor-binding domain-- 53850_54782_ 53850_54782_ A_14 B_72 E_13 3_2_1 99 A_257 B_5627 E_740 --A_14 B_72 E_18 -- endn_99999 endc INPDB CPL Periplasmic binding protein-like II--Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain-- 51735_51905_ 51735_51905_ A_12 B_85 E_27 12_4_8 124 A_993 B_8798 E_3827 --A_358 B_2910 E_1243 -- endn_52283_52507_99999 51905_51735_47473_endc_54427_55021_54373_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--FAD/NAD(P)-binding domain-- 46785_53335_ 46785_53335_ A_13 B_45 E_67 8_4_4 125 A_1241 B_7979 E_2143 --A_733 B_3918 E_2070 -- endn_48264_55486_99999 56209_53335_endc_99999 INPDB CPL "Winged helix" DNA-binding domain--S-adenosyl-L-methionine-dependent methyltransferases-- 52540_46689_ 52540_46689_ A_2 B_196 E_4 15_8_7 202 A_2129 B_14320 E_12913 --A_246 B_4125 E_4002 -- 51366_51391_endn_51735_55781_52172_55785_99999 52540_46894_endc_55785_99999_46689_53098 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Homeodomain-like-- 46548_51971_ 46548_51971_ A_10 B_94 E_8 10_6_4 112 A_125 B_477 E_67 --A_47 B_404 E_155 -- endn_54292_52343_99999_69336_54862 51905_endc_99999_51971 NOTPDB CPL alpha-helical ferredoxin--Nucleotide-binding domain-- 51366_51366_ 51366_51366_ A_3 B_19 E_2 4_2_2 24 A_289 B_986 E_160 --A_289 B_986 E_160 -- endn_52317 endc_99999 INPDB RPT Ribulose-phoshate binding barrel--Ribulose-phoshate binding barrel-- 54292_46548_ 54292_46548_ A_13 B_109 E_21 9_2_7 143 A_44 B_565 E_187 --A_125 B_477 E_67 -- endn_99999 81343_53706_57716_53920_endc_51971_99999 INPDB CPL 2Fe-2S ferredoxin-like--alpha-helical ferredoxin-- 52540_46785_ 52540_46785_ A_80 B_130 E_29 14_6_8 239 A_2129 B_14320 E_12913 --A_1241 B_7979 E_2143 -- 52540_53901_endn_52172_99999_55785 51366_52540_48452_52980_endc_48439_47781_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--"Winged helix" DNA-binding domain-- 52402_54810_ 52402_54810_ A_13 B_84 E_7 4_3_1 104 A_350 B_1402 E_436 --A_13 B_87 E_19 -- 48150_endn_52317 endc INPDB CPL Adenine nucleotide alpha hydrolases-like--GMP synthetase C-terminal dimerisation domain-- 51445_51011_ 51445_51011_ A_8 B_286 E_130 12_4_8 424 A_89 B_1646 E_1474 --A_17 B_377 E_212 -- 54556_endn_81296_99999 49452_56655_49785_81296_endc_50370_56112_99999 INPDB CPL (Trans)glycosidases--alpha-Amylases, C-terminal beta-sheet domain-- 75604_53335_ 75604_53335_ A_12 B_1 E_8 4_1_3 21 A_72 B_25 E_70 --A_733 B_3918 E_2070 -- endn 53335_endc_99999 NOTPDB CPL Archaeosine tRNA-guanine transglycosylase, C-terminal additional domains--S-adenosyl-L-methionine-dependent methyltransferases-- 47323_47323_ 47323_47323_ A_3 B_11 E_1 3_2_1 15 A_100 B_688 E_246 --A_100 B_688 E_246 -- 52374_99999 endc NOTPDB RPT Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases--Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases-- 81665_56784_ 81665_56784_ A_25 B_245 E_51 8_3_5 321 A_43 B_361 E_378 --A_230 B_1745 E_1267 -- endn_81653_99999 53383_55008_endc_81665_99999 NOTPDB CPL Calcium ATPase, transmembrane domain M--HAD-like-- 46785_52980_ 46785_52980_ A_30 B_5 E_1 6_3_3 36 A_1241 B_7979 E_2143 --A_117 B_308 E_46 -- 52540_endn_49998 52540_endc_99999 INPDB CPL "Winged helix" DNA-binding domain--Restriction endonuclease-like-- 51419_50621_ 51419_50621_ A_11 B_253 E_56 9_6_3 320 A_13 B_426 E_106 --A_14 B_268 E_63 -- 50249_endn_51735_53244_50621_99999 endc_50621_99999 INPDB CPL PLP-binding barrel--Alanine racemase-like, C-terminal domain-- 50249_55681_ 50249_55681_ A_28 B_250 E_91 6_3_3 369 A_390 B_2734 E_1438 --A_205 B_1250 E_450 -- 50249_endn_99999 55261_endc_99999 INPDB CPL Nucleic acid-binding proteins--Class II aaRS and biotin synthetases-- 54373_51735_ 54373_51735_ A_2 B_8 E_4 3_2_1 14 A_16 B_381 E_311 --A_993 B_8798 E_3827 -- 51905_51971 endc NOTPDB CPL FAD-linked reductases, C-terminal domain--NAD(P)-binding Rossmann-fold domains-- 53686_55021_ 53686_55021_ A_6 B_51 E_10 3_1_2 67 A_91 B_529 E_203 --A_109 B_662 E_147 -- endn 55021_endc INPDB CPL Tryptophan synthase beta subunit-like PLP-dependent enzymes--Regulatory domain in the aminoacid metabolism-- 56784_52540_ 56784_52540_ A_1 B_3 E_12 6_3_3 16 A_230 B_1745 E_1267 --A_2129 B_14320 E_12913 -- endn_99999_49879 52540_56784_endc NOTPDB CPL HAD-like--P-loop containing nucleotide triphosphate hydrolases-- 51230_47005_ 51230_47005_ A_6 B_142 E_35 8_3_5 183 A_35 B_1330 E_195 --A_6 B_185 E_52 -- 51230_endn_99999 53474_52777_47005_endc_99999 NOTPDB CPL Single hybrid motif--Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex-- 46689_53098_ 46689_53098_ A_72 B_509 E_164 9_5_4 745 A_246 B_4125 E_4002 --A_290 B_2494 E_2335 -- 52540_endn_46785_46689_99999 50610_endc_56112_99999 NOTPDB CPL Homeodomain-like--Ribonuclease H-like-- 52540_81271_ 52540_81271_ A_21 B_98 E_24 7_4_3 143 A_2129 B_14320 E_12913 --A_25 B_298 E_67 -- 52540_endn_54285_99999 52540_endc_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--TGS-like-- 51905_56425_ 51905_56425_ A_20 B_217 E_48 8_5_3 285 A_358 B_2910 E_1243 --A_22 B_246 E_72 -- 52218_52266_endn_48695_99999 46977_51735_99999 INPDB CPL FAD/NAD(P)-binding domain--Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain-- 57783_57667_ 57783_57667_ A_1 B_5 E_46 10_5_5 52 A_193 B_620 E_393 --A_23 B_24 E_4849 -- endn_57667_57783_57850_99999 46894_57667_57783_endc_99999 NOTPDB CPL Zinc beta-ribbon--C2H2 and C2HC zinc fingers-- 48334_52540_ 48334_52540_ A_7 B_129 E_84 7_3_4 220 A_8 B_135 E_96 --A_2129 B_14320 E_12913 -- endn_53150_99999 52540_endc_50104_99999 INPDB CPL DNA repair protein MutS, domain III--P-loop containing nucleotide triphosphate hydrolases-- 52518_52467_ 52518_52467_ A_43 B_293 E_58 10_5_5 394 A_239 B_1128 E_328 --A_132 B_640 E_265 -- 52047_endn_99999_53850_57802 52518_endc_51679_99999_53850 INPDB CPL Thiamin diphosphate-binding fold (THDP-binding)--DHS-like NAD/FAD-binding domain-- 46785_56112_ 46785_56112_ A_13 B_2 E_19 4_2_2 34 A_1241 B_7979 E_2143 --A_114 B_971 E_9319 -- endn_99999 endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Protein kinase-like (PK-like)-- 51182_52540_ 51182_52540_ A_1 B_14 E_1 4_1_3 16 A_107 B_1063 E_385 --A_2129 B_14320 E_12913 -- endn 52540_54980_50447 NOTPDB CPL RmlC-like cupins--P-loop containing nucleotide triphosphate hydrolases-- 52540_50331_ 52540_50331_ A_4 B_20 E_2 8_4_4 26 A_2129 B_14320 E_12913 --A_61 B_521 E_45 -- 52540_53795_endn_99999 50331_52540_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--MOP-like-- 54791_50249_ 54791_50249_ A_1 B_22 E_6 5_3_2 29 A_38 B_130 E_562 --A_390 B_2734 E_1438 -- 54211_55666_99999 endc_99999 INPDB CPL Eukaryotic type KH-domain (eKH-domain)--Nucleic acid-binding proteins-- 46785_54909_ 46785_54909_ A_73 B_298 E_9 6_3_3 380 A_1241 B_7979 E_2143 --A_113 B_586 E_39 -- endn_54909_99999 endc_46785_99999 INPDB CPL "Winged helix" DNA-binding domain--Dimeric alpha+beta barrel-- 54111_51278_ 54111_51278_ A_1 B_6 E_2 3_1_2 9 A_2 B_43 E_5 --A_1 B_42 E_4 -- endn 51338_endc INPDB CPL Urease, gamma-subunit--Urease, beta-subunit-- 55874_52172_ 55874_52172_ A_3 B_391 E_20 19_8_11 414 A_178 B_2970 E_398 --A_85 B_3166 E_241 -- endn_55781_52172_56601_47384_50998_55785_99999 63411_46894_48283_47384_endc_55073_47226_52172_46689_55874_99999 NOTPDB CPL ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase--CheY-like-- 50800_51621_ 50800_51621_ A_13 B_116 E_63 5_3_2 192 A_21 B_142 E_93 --A_75 B_609 E_182 -- endn_53187_99999 endc_52935 INPDB CPL PK beta-barrel domain-like--Phosphoenolpyruvate/pyruvate domain-- 49303_51445_ 49303_51445_ A_1 B_84 E_21 10_3_7 106 A_2 B_88 E_38 --A_89 B_1646 E_1474 -- endn_49785_99999 49785_49899_56988_49303_endc_74650_99999 INPDB CPL beta-Galactosidase/glucuronidase domain--(Trans)glycosidases-- 81342_81648_ 81342_81648_ A_10 B_31 E_5 5_3_2 46 A_21 B_221 E_27 --A_12 B_49 E_12 -- endn_81452_99999 endc_99999 INPDB CPL Transmembrane di-heme cytochromes--a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)-- 54897_52743_ 54897_52743_ A_4 B_41 E_61 7_2_5 106 A_10 B_72 E_302 --A_34 B_214 E_253 -- endn_99999 52242_52025_endc_50998_99999 NOTPDB CPL Protease propeptides/inhibitors--Subtilisin-like-- 54675_51690_ 54675_51690_ A_21 B_73 E_10 6_2_4 104 A_28 B_108 E_35 --A_30 B_124 E_12 -- endn_99999 63393_51735_endc_99999 INPDB CPL Quinolinic acid phosphoribosyltransferase, N-terminal domain--Quinolinic acid phosphoribosyltransferase, C-terminal domain-- 52402_52467_ 52402_52467_ A_15 B_71 E_17 4_3_1 103 A_350 B_1402 E_436 --A_132 B_640 E_265 -- endn_52402_54862 endc INPDB CPL Adenine nucleotide alpha hydrolases-like--DHS-like NAD/FAD-binding domain-- 52540_54814_ 52540_54814_ A_15 B_90 E_14 6_3_3 119 A_2129 B_14320 E_12913 --A_82 B_390 E_98 -- 52540_endn_99999 52540_endc_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--Prokaryotic type KH domain (pKH-domain)-- 46785_55729_ 46785_55729_ A_2 B_11 E_2 5_3_2 15 A_1241 B_7979 E_2143 --A_217 B_2438 E_800 -- endn_99999_54862 endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Acyl-CoA N-acyltransferases (Nat)-- 63882_53218_ 63882_53218_ A_35 B_91 E_25 9_4_5 151 A_38 B_93 E_30 --A_63 B_253 E_54 -- 52540_endn_53218_99999 52540_endc_63867_53850_99999 INPDB CPL Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains--Molybdenum cofactor biosynthesis proteins-- 50993_53474_ 50993_53474_ A_3 B_57 E_25 4_3_1 85 A_3 B_71 E_74 --A_141 B_2949 E_2909 -- endn_99999_56935 endc INPDB CPL Prolyl oligopeptidase, N-terminal domain--alpha/beta-Hydrolases-- 52172_52172_ 52172_52172_ A_6 B_108 E_9 16_8_8 123 A_85 B_3166 E_241 --A_85 B_3166 E_241 -- endn_53271_50341_47226_50249_52172_55874_99999 47226_53448_46894_52172_endc_55073_55785_99999 NOTPDB RPT CheY-like--CheY-like-- 48439_48452_ 48439_48452_ A_9 B_10 E_64 9_4_5 83 A_48 B_249 E_670 --A_146 B_1937 E_3442 -- endn_48452_48439_99999 53901_48452_endc_48439_99999 NOTPDB CPL Protein prenylyltransferase--TPR-like-- 47979_50037_ 47979_50037_ A_10 B_25 E_1 6_3_3 36 A_31 B_55 E_1 --A_36 B_160 E_9 -- endn_46785_99999 50037_endc_99999 INPDB CPL Iron-dependent represor protein, dimerization domain--C-terminal domain of transcriptional repressors-- 52833_48371_ 52833_48371_ A_1 B_1 E_2 4_3_1 4 A_220 B_2517 E_2068 --A_73 B_255 E_3951 -- endn_52833_99999 endc NOTPDB CPL Thioredoxin-like--ARM repeat-- 52922_52518_ 52922_52518_ A_20 B_21 E_3 6_3_3 44 A_105 B_497 E_111 --A_239 B_1128 E_328 -- endn_52518_99999 53323_endc_99999 NOTPDB CPL TK C-terminal domain-like--Thiamin diphosphate-binding fold (THDP-binding)-- 55729_55729_ 55729_55729_ A_8 B_98 E_49 11_7_4 155 A_217 B_2438 E_800 --A_217 B_2438 E_800 -- 53383_endn_46966_52317_54593_55729_99999 53474_endc_55729_99999 INPDB RPT Acyl-CoA N-acyltransferases (Nat)--Acyl-CoA N-acyltransferases (Nat)-- 53732_52016_ 53732_52016_ A_1 B_7 E_30 4_2_2 38 A_34 B_191 E_68 --A_33 B_193 E_111 -- endn_99999 endc_99999 INPDB CPL Aconitase iron-sulfur domain--Aconitase-- 53756_56784_ 53756_56784_ A_1 B_5 E_22 4_2_2 28 A_262 B_1575 E_1122 --A_230 B_1745 E_1267 -- endn_99999 endc_99999 NOTPDB CPL UDP-Glycosyltransferase/glycogen phosphorylase--HAD-like-- 48168_51998_ 48168_51998_ A_1 B_91 E_19 6_3_3 111 A_2 B_94 E_23 --A_39 B_258 E_33 -- 53335_endn_99999 75625_endc_99999 INPDB CPL R1 subunit of ribonucleotide reductase, N-terminal domain--PFL-like glycyl radical enzymes-- 56235_53697_ 56235_53697_ A_16 B_92 E_34 6_4_2 142 A_157 B_611 E_596 --A_65 B_630 E_103 -- 53697_endn_99999_55608 56235_endc INPDB CPL N-terminal nucleophile aminohydrolases (Ntn hydrolases)--SIS domain-- 51735_55347_ 51735_55347_ A_106 B_791 E_493 13_5_8 1390 A_993 B_8798 E_3827 --A_119 B_836 E_588 -- 53633_50129_51690_endn_99999 55136_51735_endc_53633_55021_69055_54211_99999 INPDB CPL NAD(P)-binding Rossmann-fold domains--Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain-- 48452_48452_ 48452_48452_ A_15 B_86 E_385 26_15_11 486 A_146 B_1937 E_3442 --A_146 B_1937 E_3442 -- 52540_81901_47220_endn_50978_46565_48113_48452_48439_51004_53383_53448_82657_55008_99999 52540_47954_53756_46565_48452_endc_47240_48439_51658_52833_99999 NOTPDB RPT TPR-like--TPR-like-- 55811_55811_ 55811_55811_ A_1 B_2 E_5 5_4_1 8 A_61 B_850 E_338 --A_61 B_850 E_338 -- 48150_endn_46689_99999 endc NOTPDB RPT Nudix--Nudix-- 51445_54556_ 51445_54556_ A_2 B_17 E_38 11_8_3 57 A_89 B_1646 E_1474 --A_2 B_23 E_41 -- 49299_endn_51055_57016_49265_57625_51445_99999 endc_51445_99999 INPDB CPL (Trans)glycosidases--Chitinase insertion domain-- 53155_46767_ 53155_46767_ A_3 B_60 E_4 6_4_2 67 A_7 B_98 E_8 --A_10 B_114 E_17 -- 57884_endn_99999_46689 endc_99999 INPDB CPL Methylated DNA-protein cysteine methyltransferase domain--Methylated DNA-protein cysteine methyltransferase, C-terminal domain-- 50494_50156_ 50494_50156_ A_6 B_206 E_51 14_9_5 263 A_19 B_482 E_1600 --A_28 B_534 E_1380 -- endn_52518_50494_47240_55486_57467_52440_55961_99999 50494_56988_50156_endc_99999 INPDB CPL Trypsin-like serine proteases--PDZ domain-like-- 63380_52343_ 63380_52343_ A_28 B_342 E_175 19_11_8 545 A_34 B_499 E_327 --A_34 B_384 E_315 -- 50475_54580_53448_52218_endn_46458_54292_55856_49764_50692_99999 48726_46548_54292_55920_53041_51905_endc_99999 INPDB CPL Riboflavin synthase domain-like--Ferredoxin reductase-like, C-terminal NADP-linked domain-- 56059_51246_ 56059_51246_ A_31 B_348 E_93 13_3_10 472 A_192 B_1104 E_490 --A_31 B_372 E_107 -- 51230_endn_52440 51230_50729_51332_51735_endc_55154_51261_55326_52255_99999 INPDB CPL Glutathione synthetase ATP-binding domain-like--Rudiment single hybrid motif-- 50249_52540_ 50249_52540_ A_1 B_141 E_24 14_7_7 166 A_390 B_2734 E_1438 --A_2129 B_14320 E_12913 -- 50249_endn_69008_52833_48024_68912_99999 54160_52540_51294_54189_endc_53850_99999 INPDB CPL Nucleic acid-binding proteins--P-loop containing nucleotide triphosphate hydrolases-- 52512_75445_ 52512_75445_ A_17 B_69 E_16 3_1_2 102 A_33 B_474 E_94 --A_18 B_89 E_28 -- endn endc_99999 INPDB CPL Phosphosugar isomerase--D-ribose-5-phosphate isomerase (RpiA), lid domain-- 53671_53671_ 53671_53671_ A_32 B_185 E_27 9_5_4 244 A_36 B_212 E_71 --A_36 B_212 E_71 -- 47413_53383_endn_52335_99999 51556_endc_54893_99999 INPDB RPT Aspartate/ornithine carbamoyltransferase--Aspartate/ornithine carbamoyltransferase-- 53150_48334_ 53150_48334_ A_4 B_74 E_31 5_3_2 109 A_4 B_81 E_57 --A_8 B_135 E_96 -- endn_55271_99999 52540_endc INPDB CPL DNA repair protein MutS, domain II--DNA repair protein MutS, domain III-- 51905_54862_ 51905_54862_ A_11 B_2 E_1 8_5_3 14 A_358 B_2910 E_1243 --A_411 B_743 E_103 -- 51366_endn_51395_54862_99999 51735_endc_99999 NOTPDB CPL FAD/NAD(P)-binding domain--4Fe-4S ferredoxins-- 52518_52922_ 52518_52922_ A_93 B_461 E_88 12_7_5 642 A_239 B_1128 E_328 --A_105 B_497 E_111 -- 51230_endn_52518_63380_53323_47240_54862 52518_53323_endc_53850_99999 INPDB CPL Thiamin diphosphate-binding fold (THDP-binding)--TK C-terminal domain-like-- 81271_55186_ 81271_55186_ A_1 B_83 E_30 5_2_3 114 A_25 B_298 E_67 --A_42 B_237 E_81 -- endn_99999 52540_55681_endc INPDB CPL TGS-like--Threonyl-tRNA synthetase (ThrRS), second 'additional' domain-- 51735_56327_ 51735_56327_ A_14 B_164 E_110 7_5_2 288 A_993 B_8798 E_3827 --A_21 B_204 E_156 -- endn_54495_51735_57802_99999 endc_99999 INPDB CPL NAD(P)-binding Rossmann-fold domains--Lactate & malate dehydrogenases, C-terminal domain-- 52540_54690_ 52540_54690_ A_2 B_1 E_2 4_2_2 5 A_2129 B_14320 E_12913 --A_16 B_67 E_18 -- 52540_endn endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Molybdopterin synthase subunit MoaE-- 81653_81665_ 81653_81665_ A_32 B_298 E_196 8_3_5 526 A_48 B_376 E_513 --A_43 B_361 E_378 -- endn_52172_99999 81660_56784_endc_99999_50814 INPDB CPL Calcium ATPase, transduction domain A--Calcium ATPase, transmembrane domain M-- 46785_46785_ 46785_46785_ A_30 B_83 E_40 15_7_8 153 A_1241 B_7979 E_2143 --A_1241 B_7979 E_2143 -- 46626_endn_50729_47943_46785_55469_99999 52540_55681_50156_63520_endc_46785_53850_99999 INPDB RPT "Winged helix" DNA-binding domain--"Winged helix" DNA-binding domain-- 54826_51604_ 54826_51604_ A_44 B_282 E_84 6_3_3 410 A_47 B_318 E_109 --A_64 B_382 E_137 -- 51569_endn_99999 53474_endc_99999 INPDB CPL Enolase N-terminal domain-like--Enolase C-terminal domain-like-- 57938_49493_ 57938_49493_ A_5 B_33 E_80 7_4_3 118 A_19 B_61 E_147 --A_8 B_140 E_172 -- 46565_53098_81730_99999 49493_endc_99999 NOTPDB CPL Cysteine-rich domain of the chaperone protein DnaJ.--HSP40/DnaJ peptide-binding domain-- 55874_50341_ 55874_50341_ A_8 B_85 E_2 7_3_4 95 A_178 B_2970 E_398 --A_19 B_255 E_17 -- endn_47384_99999 50341_52172_endc_99999 INPDB CPL ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase--CheW-like-- 54631_54631_ 54631_54631_ A_193 B_543 E_127 39_20_19 863 A_209 B_782 E_239 --A_209 B_782 E_239 -- 75138_51206_50129_endn_48371_53686_55486_54862_53697_53795_56672_46785_52540_81340_51735_47413_54631_64182_53474_99999 46626_51230_54637_54001_51412_52402_54211_54791_55021_81301_46785_55874_55785_51735_endc_57783_53448_54631_99999 INPDB RPT CBS-domain--CBS-domain-- 82171_53474_ 82171_53474_ A_3 B_28 E_61 6_4_2 92 A_11 B_35 E_129 --A_141 B_2949 E_2909 -- 49468_endn_52402_99999 endc_99999 INPDB CPL Dipeptidyl peptidase IV/CD26, N-terminal domain--alpha/beta-Hydrolases-- 52540_48452_ 52540_48452_ A_3 B_18 E_8 10_7_3 29 A_2129 B_14320 E_12913 --A_146 B_1937 E_3442 -- 52540_53795_endn_52200_46785_55073_99999 48452_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--TPR-like-- 53623_53244_ 53623_53244_ A_10 B_492 E_17 15_8_7 519 A_21 B_536 E_49 --A_16 B_527 E_43 -- 63418_51569_endn_52440_56059_51984_51735_99999 51569_51419_52440_endc_51735_53623_99999 INPDB CPL MurD-like peptide ligases, catalytic domain--MurD-like peptide ligases, peptide-binding domain-- 56553_55257_ 56553_55257_ A_16 B_99 E_45 5_2_3 160 A_17 B_105 E_51 --A_36 B_108 E_92 -- endn_99999 endc_47789_99999 INPDB CPL Insert subdomain of RNA polymerase alpha subunit--RBP11-like subunits of RNA polymerase-- 54768_54211_ 54768_54211_ A_17 B_96 E_144 5_2_3 257 A_18 B_198 E_397 --A_200 B_1096 E_669 -- endn_99999 49785_endc_99999 INPDB CPL dsRNA-binding domain-like--Ribosomal protein S5 domain 2-like-- 52172_55874_ 52172_55874_ A_2 B_17 E_1 5_2_3 20 A_85 B_3166 E_241 --A_178 B_2970 E_398 -- endn_55874 51206_52172_endc NOTPDB CPL CheY-like--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 51905_54373_ 51905_54373_ A_8 B_235 E_235 18_10_8 478 A_358 B_2910 E_1243 --A_16 B_381 E_311 -- 53335_endn_51735_47473_51905_53474_56425_51971_53850_99999 53335_51905_51735_endc_51430_52833_99999_51971 INPDB CPL FAD/NAD(P)-binding domain--FAD-linked reductases, C-terminal domain-- 52833_48208_ 52833_48208_ A_13 B_22 E_14 4_2_2 49 A_220 B_2517 E_2068 --A_67 B_360 E_274 -- endn_99999 endc_99999 NOTPDB CPL Thioredoxin-like--Six-hairpin glycosyltransferases-- 56281_52821_ 56281_52821_ A_3 B_14 E_1 4_2_2 18 A_273 B_950 E_318 --A_39 B_452 E_298 -- endn_99999 endc_52821 NOTPDB CPL Metallo-hydrolase/oxidoreductase--Rhodanese/Cell cycle control phosphatase-- 52335_64197_ 52335_64197_ A_4 B_81 E_18 3_2_1 103 A_15 B_241 E_47 --A_5 B_85 E_24 -- endn_99999 endc INPDB CPL Methylglyoxal synthase-like--AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC-- 47364_52540_ 47364_52540_ A_32 B_193 E_42 8_4_4 267 A_35 B_206 E_59 --A_2129 B_14320 E_12913 -- endn_48452_47473_99999 52540_47446_endc_99999 INPDB CPL Domain of the SRP/SRP receptor G-proteins--P-loop containing nucleotide triphosphate hydrolases-- 46785_50331_ 46785_50331_ A_2 B_17 E_1 4_1_3 20 A_1241 B_7979 E_2143 --A_61 B_521 E_45 -- endn 50331_endc_99999 INPDB CPL "Winged helix" DNA-binding domain--MOP-like-- 52440_52540_ 52440_52540_ A_1 B_3 E_2 5_3_2 6 A_71 B_698 E_210 --A_2129 B_14320 E_12913 -- 52540_endn_99999 52540_99999 NOTPDB CPL PreATP-grasp domain--P-loop containing nucleotide triphosphate hydrolases-- 49503_49503_ 49503_49503_ A_6 B_74 E_141 10_3_7 221 A_81 B_368 E_450 --A_81 B_368 E_450 -- endn_49503_99999 46626_49785_49503_69179_endc_50998_99999 INPDB RPT Cupredoxins--Cupredoxins-- 54368_55931_ 54368_55931_ A_24 B_156 E_52 7_3_4 232 A_24 B_160 E_53 --A_25 B_190 E_126 -- endn_51556_99999 53738_53756_endc_99999 INPDB CPL Glutamine synthetase, N-terminal domain--Glutamine synthase/guanido kinase-- 52490_55307_ 52490_55307_ A_23 B_94 E_258 8_5_3 375 A_37 B_111 E_301 --A_28 B_99 E_286 -- 81321_endn_55307_52490_99999 endc_52490_99999 INPDB CPL Tubulin, GTPase domain--Tubulin, C-terminal domain-- 54506_54506_ 54506_54506_ A_5 B_87 E_10 4_2_2 102 A_6 B_134 E_21 --A_6 B_134 E_21 -- endn_99999 endc_99999 INPDB RPT Diaminopimelate epimerase--Diaminopimelate epimerase-- 51556_51556_ 51556_51556_ A_1 B_4 E_5 5_4_1 10 A_183 B_1070 E_385 --A_183 B_1070 E_385 -- endn_51338_74650_99999 endc NOTPDB RPT Metallo-dependent hydrolases--Metallo-dependent hydrolases-- 47757_53335_ 47757_53335_ A_10 B_80 E_2 7_3_4 92 A_10 B_83 E_5 --A_733 B_3918 E_2070 -- endn_52738_99999 48452_endc_48439_99999 INPDB CPL Chemotaxis receptor methyltransferase CheR, N-terminal domain--S-adenosyl-L-methionine-dependent methyltransferases-- 46689_52540_ 46689_52540_ A_2 B_8 E_7 6_3_3 17 A_246 B_4125 E_4002 --A_2129 B_14320 E_12913 -- 52540_endn_99999 52540_endc_99999 NOTPDB CPL Homeodomain-like--P-loop containing nucleotide triphosphate hydrolases-- 53448_53448_ 53448_53448_ A_4 B_39 E_4 10_5_5 47 A_346 B_1868 E_1125 --A_346 B_1868 E_1125 -- 53448_53335_endn_53756_99999 53335_53448_53756_endc_99999 NOTPDB RPT Nucleotide-diphospho-sugar transferases--Nucleotide-diphospho-sugar transferases-- 47413_51182_ 47413_51182_ A_2 B_39 E_2 5_2_3 43 A_123 B_1973 E_199 --A_107 B_1063 E_385 -- endn_99999 53335_endc_99999 NOTPDB CPL lambda repressor-like DNA-binding domains--RmlC-like cupins-- 52507_51735_ 52507_51735_ A_9 B_56 E_1 9_3_6 66 A_47 B_152 E_29 --A_993 B_8798 E_3827 -- 47598_endn_99999 51366_51569_51735_51905_endc_51971 NOTPDB CPL DFP DNA/pantothenate metabolism flavoprotein--NAD(P)-binding Rossmann-fold domains-- 46565_48695_ 46565_48695_ A_2 B_72 E_3 5_2_3 77 A_12 B_326 E_827 --A_18 B_378 E_163 -- endn_99999 49493_endc_99999 NOTPDB CPL Chaperone J-domain--Multiheme cytochromes-- 54862_46548_ 54862_46548_ A_4 B_8 E_2 6_2_4 14 A_411 B_743 E_103 --A_125 B_477 E_67 -- endn_99999 endc_51905_54862_51971 NOTPDB CPL 4Fe-4S ferredoxins--alpha-helical ferredoxin-- 54849_52029_ 54849_52029_ A_37 B_129 E_210 6_3_3 376 A_39 B_132 E_217 --A_38 B_142 E_269 -- endn_99999_48592 endc_52029_99999 INPDB CPL GroEL-intermediate domain like--GroEL apical domain-like-- 50998_50998_ 50998_50998_ A_1 B_2 E_2 5_3_2 5 A_73 B_392 E_284 --A_73 B_392 E_284 -- endn_49299_99999 49299_endc NOTPDB RPT Quinoprotein alcohol dehydrogenase-like--Quinoprotein alcohol dehydrogenase-like-- 51971_54373_ 51971_54373_ A_7 B_127 E_42 9_5_4 176 A_47 B_404 E_155 --A_16 B_381 E_311 -- 53335_51197_endn_54373_99999 51735_51905_endc_99999 INPDB CPL Nucleotide-binding domain--FAD-linked reductases, C-terminal domain-- 55271_53150_ 55271_53150_ A_2 B_73 E_12 5_2_3 87 A_4 B_79 E_36 --A_4 B_81 E_57 -- endn_99999 endc_99999_48334 INPDB CPL DNA repair protein MutS, domain I--DNA repair protein MutS, domain II-- 54211_55060_ 54211_55060_ A_79 B_217 E_64 8_4_4 360 A_200 B_1096 E_669 --A_83 B_250 E_130 -- endn_54631_55347_99999 55811_51161_endc_99999 INPDB CPL Ribosomal protein S5 domain 2-like--GHMP Kinase-- 69742_51735_ 69742_51735_ A_13 B_59 E_4 5_2_3 76 A_13 B_64 E_6 --A_993 B_8798 E_3827 -- endn_99999 endc_69075_99999 INPDB CPL Glutamyl tRNA-reductase catalytic, N-terminal domain--NAD(P)-binding Rossmann-fold domains-- 48695_49493_ 48695_49493_ A_2 B_57 E_2 4_2_2 61 A_18 B_378 E_163 --A_8 B_140 E_172 -- endn_46565 endc_99999 NOTPDB CPL Multiheme cytochromes--HSP40/DnaJ peptide-binding domain-- 50104_50249_ 50104_50249_ A_17 B_109 E_43 7_4_3 169 A_89 B_444 E_354 --A_390 B_2734 E_1438 -- endn_50978_63380_99999 56784_endc_99999 INPDB CPL Translation proteins SH3-like domain--Nucleic acid-binding proteins-- 48108_52440_ 48108_52440_ A_13 B_86 E_23 5_2_3 122 A_16 B_93 E_27 --A_71 B_698 E_210 -- endn_56059 56059_endc_99999 INPDB CPL Carbamoyl phosphate synthetase, large subunit connection domain--PreATP-grasp domain-- 52540_46626_ 52540_46626_ A_1 B_1 E_2 5_3_2 4 A_2129 B_14320 E_12913 --A_40 B_894 E_220 -- 53067_endn_99999 52540_endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Cytochrome c-- 56645_47203_ 56645_47203_ A_58 B_556 E_216 25_14_11 830 A_70 B_599 E_245 --A_62 B_573 E_243 -- 47203_endn_56801_51735_74778_47413_54292_53822_55856_46955_82919_53850_99999_56112 63411_56645_52467_48239_53795_47203_endc_48317_51679_56854_99999 INPDB CPL Acyl-CoA dehydrogenase NM domain-like--Acyl-CoA dehydrogenase C-terminal domain-like-- 56235_53271_ 56235_53271_ A_19 B_81 E_20 6_2_4 120 A_157 B_611 E_596 --A_132 B_838 E_254 -- endn_99999 56235_51395_endc_99999 INPDB CPL N-terminal nucleophile aminohydrolases (Ntn hydrolases)--PRTase-like-- 52467_52540_ 52467_52540_ A_1 B_2 E_1 4_2_2 4 A_132 B_640 E_265 --A_2129 B_14320 E_12913 -- 52540_endn endc_99999 NOTPDB CPL DHS-like NAD/FAD-binding domain--P-loop containing nucleotide triphosphate hydrolases-- 53850_51126_ 53850_51126_ A_1 B_16 E_1 3_2_1 18 A_257 B_5627 E_740 --A_116 B_481 E_444 -- endn_99999 endc NOTPDB CPL Periplasmic binding protein-like II--Pectin lyase-like-- 46565_57938_ 46565_57938_ A_4 B_25 E_71 4_2_2 100 A_12 B_326 E_827 --A_19 B_61 E_147 -- endn_99999 49493_99999 NOTPDB CPL Chaperone J-domain--Cysteine-rich domain of the chaperone protein DnaJ.-- 52374_48163_ 52374_48163_ A_14 B_124 E_15 4_2_2 153 A_247 B_1540 E_642 --A_20 B_133 E_29 -- endn_99999 endc_99999 INPDB CPL Nucleotidylyl transferase--An anticodon-binding domain of class I aminoacyl-tRNA synthetases-- 81324_51735_ 81324_51735_ A_15 B_43 E_32 8_4_4 90 A_34 B_130 E_1059 --A_993 B_8798 E_3827 -- endn_54236_51735_99999 51735_endc_75500_99999 INPDB CPL Voltage-gated potassium channels--NAD(P)-binding Rossmann-fold domains-- 53383_52540_ 53383_52540_ A_1 B_5 E_4 4_1_3 10 A_367 B_2974 E_1139 --A_2129 B_14320 E_12913 -- endn 52540_52317_endc NOTPDB CPL PLP-dependent transferases--P-loop containing nucleotide triphosphate hydrolases-- 51569_51269_ 51569_51269_ A_1 B_23 E_6 5_3_2 30 A_136 B_1089 E_356 --A_4 B_49 E_9 -- 51366_endn_99999 51658_endc NOTPDB CPL Aldolase--Type III antifreeze protein-- 52540_47446_ 52540_47446_ A_17 B_96 E_20 5_2_3 133 A_2129 B_14320 E_12913 --A_18 B_101 E_23 -- endn_47364 52540_endc_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--Signal peptide-binding domain-- 55608_55608_ 55608_55608_ A_17 B_7 E_7 17_9_8 31 A_42 B_71 E_32 --A_42 B_71 E_32 -- 46626_51294_endn_46894_64484_81342_81442_99999_46689 52540_47413_51294_64496_51998_54786_endc_99999 INPDB RPT Homing endonucleases--Homing endonucleases-- 53335_52540_ 53335_52540_ A_4 B_8 E_1 6_2_4 13 A_733 B_3918 E_2070 --A_2129 B_14320 E_12913 -- endn_99999 52540_endc_99999_55729 NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--P-loop containing nucleotide triphosphate hydrolases-- 50156_50156_ 50156_50156_ A_4 B_122 E_300 14_9_5 426 A_28 B_534 E_1380 --A_28 B_534 E_1380 -- 51045_endn_52833_47769_50729_50494_50156_46785_99999 52096_50044_50156_endc_99999 INPDB RPT PDZ domain-like--PDZ domain-like-- 55785_47384_ 55785_47384_ A_26 B_440 E_17 14_11_3 483 A_168 B_1284 E_394 --A_45 B_1750 E_74 -- 46966_endn_56849_46579_55781_53474_52172_48317_99999_53850_55785 endc_99999_55874 NOTPDB CPL PYP-like sensor domain (PAS domain)--Homodimeric domain of signal transducing histidine kinase-- 55190_52374_ 55190_52374_ A_12 B_98 E_26 4_2_2 136 A_17 B_103 E_34 --A_247 B_1540 E_642 -- endn_99999 47323_endc INPDB CPL Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain--Nucleotidylyl transferase-- 48592_54849_ 48592_54849_ A_37 B_129 E_209 4_2_2 375 A_38 B_136 E_258 --A_39 B_132 E_217 -- endn_99999 endc_52029 INPDB CPL GroEL equatorial domain-like chaperone equatorial domain--GroEL-intermediate domain like-- 51445_52279_ 51445_52279_ A_1 B_55 E_42 5_3_2 98 A_89 B_1646 E_1474 --A_1 B_68 E_47 -- endn_49785_99999 endc_99999 INPDB CPL (Trans)glycosidases--Beta-D-glucan exohydrolase, C-terminal domain-- 54416_54416_ 54416_54416_ A_1 B_3 E_17 6_3_3 21 A_1 B_40 E_61 --A_1 B_40 E_61 -- 55383_endn_99999 endc_49998_99999 INPDB RPT Copper amine oxidase, domains 1 and 2--Copper amine oxidase, domains 1 and 2-- 56634_52317_ 56634_52317_ A_1 B_18 E_2 3_2_1 21 A_3 B_103 E_43 --A_204 B_1244 E_262 -- endn_99999 endc INPDB CPL Heme-linked catalases--Class I glutamine amidotransferase-like-- 51735_52283_ 51735_52283_ A_2 B_112 E_19 11_5_6 133 A_993 B_8798 E_3827 --A_53 B_465 E_206 -- endn_52283_51905_51735_99999 55021_81338_51905_51735_endc_99999 INPDB CPL NAD(P)-binding Rossmann-fold domains--Formate/glycerate dehydrogenase catalytic domain-like-- 49464_49464_ 49464_49464_ A_5 B_7 E_8 8_3_5 20 A_30 B_195 E_96 --A_30 B_195 E_96 -- 49482_53187_99999 52833_49464_endc_49265_99999 NOTPDB RPT Carboxypeptidase D, a regulatory domain--Carboxypeptidase D, a regulatory domain-- 52402_52402_ 52402_52402_ A_16 B_85 E_2 6_4_2 103 A_350 B_1402 E_436 --A_350 B_1402 E_436 -- endn_54631_55608_99999 52467_endc NOTPDB RPT Adenine nucleotide alpha hydrolases-like--Adenine nucleotide alpha hydrolases-like-- AC 50 47240_52540_ 47240_52540_ A_1 E_5 6_3_3 6 A_126 B_660 E_337 --A_2129 B_14320 E_12913 -- 51294_endn_48452 52540_endc_99999 NOTPDB CPL Ferritin-like--P-loop containing nucleotide triphosphate hydrolases-- 52402_52833_ 52402_52833_ A_1 E_3 4_2_2 4 A_350 B_1402 E_436 --A_220 B_2517 E_2068 -- 75604_99999 endc_99999 NOTPDB CPL Adenine nucleotide alpha hydrolases-like--Thioredoxin-like-- 53795_53067_ 53795_53067_ A_1 E_1 3_1_2 2 A_421 B_3843 E_485 --A_176 B_1667 E_1029 -- endn endc_99999 NOTPDB CPL PEP carboxykinase-like--Actin-like ATPase domain-- 47473_54001_ 47473_54001_ A_1 E_1 3_1_2 2 A_51 B_190 E_2808 --A_60 B_262 E_1838 -- endn 49758_99999 NOTPDB CPL EF-hand--Cysteine proteinases-- 48439_52540_ 48439_52540_ A_2 E_1 4_3_1 3 A_48 B_249 E_670 --A_2129 B_14320 E_12913 -- endn_48452_46785 endc NOTPDB CPL Protein prenylyltransferase--P-loop containing nucleotide triphosphate hydrolases-- 52540_57802_ 52540_57802_ A_2 E_1 3_1_2 3 A_2129 B_14320 E_12913 --A_77 B_171 E_177 -- endn 52540_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Rubredoxin-like-- 46929_46929_ 46929_46929_ A_1 E_1 3_2_1 2 A_4 B_93 E_19 --A_4 B_93 E_19 -- 50249_99999 endc NOTPDB RPT DNA helicase RuvA subunit, C-terminal domain--DNA helicase RuvA subunit, C-terminal domain-- 47943_52540_ 47943_52540_ A_1 E_1 3_1_2 2 A_1 B_7 E_66 --A_2129 B_14320 E_12913 -- endn endc_99999 NOTPDB CPL Retrovirus capsid protein, N-terminal core domain--P-loop containing nucleotide triphosphate hydrolases-- 52540_47781_ 52540_47781_ A_2 E_1 3_2_1 3 A_2129 B_14320 E_12913 --A_49 B_595 E_68 -- 52540_endn endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--RuvA domain 2-like-- 56300_56300_ 56300_56300_ A_3 E_1 3_1_2 4 A_170 B_837 E_750 --A_170 B_837 E_750 -- endn endc_99999 NOTPDB RPT Metallo-dependent phosphatases--Metallo-dependent phosphatases-- 48439_48439_ 48439_48439_ A_3 E_5 7_3_4 8 A_48 B_249 E_670 --A_48 B_249 E_670 -- endn_48452_99999 48452_endc_99999_48439 NOTPDB RPT Protein prenylyltransferase--Protein prenylyltransferase-- 50965_49265_ 50965_49265_ A_2 E_3 3_1_2 5 A_4 B_35 E_898 --A_23 B_135 E_1734 -- endn 49265_99999 NOTPDB CPL Galactose oxidase, central domain--Fibronectin type III-- 52540_48439_ 52540_48439_ A_1 E_1 3_2_1 2 A_2129 B_14320 E_12913 --A_48 B_249 E_670 -- 52540_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Protein prenylyltransferase-- 50692_54585_ 50692_54585_ A_31 E_59 5_2_3 90 A_113 B_397 E_88 --A_42 B_8 E_91 -- endn_99999 52540_endc_99999 INPDB CPL ADC-like--Cdc48 domain 2-like-- 46785_63393_ 46785_63393_ A_6 E_1 3_1_2 7 A_1241 B_7979 E_2143 --A_121 B_137 E_69 -- endn endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--RBP12 subunit of RNA polymerase II-- 53807_52540_ 53807_52540_ A_1 E_1 3_2_1 2 A_104 B_499 E_42 --A_2129 B_14320 E_12913 -- 53335_99999 endc NOTPDB CPL "Helical backbone" metal receptor--P-loop containing nucleotide triphosphate hydrolases-- 54292_52540_ 54292_52540_ A_1 E_1 3_1_2 2 A_44 B_565 E_187 --A_2129 B_14320 E_12913 -- endn endc_99999 NOTPDB CPL 2Fe-2S ferredoxin-like--P-loop containing nucleotide triphosphate hydrolases-- 55267_53032_ 55267_53032_ A_16 E_1 6_3_3 17 A_18 E_7 --A_21 B_3 E_40 -- endn_53032_99999 endc_55267_99999 INPDB CPL tRNA splicing endonuclease EdnA, N-terminal domain--tRNA splicing endonuclease, C-terminal domain-- 57783_47954_ 57783_47954_ A_27 E_42 5_2_3 69 A_193 B_620 E_393 --A_52 B_42 E_726 -- endn_99999 47954_endc_99999 NOTPDB CPL Zinc beta-ribbon--Cyclin-like-- 55481_53137_ 55481_53137_ A_20 E_26 4_2_2 46 A_20 E_26 --A_72 B_204 E_155 -- endn_99999 endc_55315 INPDB CPL N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1--Translational machinery components-- 54791_54814_ 54791_54814_ A_8 E_32 7_3_4 40 A_38 B_130 E_562 --A_82 B_390 E_98 -- 54791_endn_99999 52467_54791_endc_99999 NOTPDB CPL Eukaryotic type KH-domain (eKH-domain)--Prokaryotic type KH domain (pKH-domain)-- 50998_52540_ 50998_52540_ A_1 E_1 4_2_2 2 A_73 B_392 E_284 --A_2129 B_14320 E_12913 -- endn_50978 52540_endc NOTPDB CPL Quinoprotein alcohol dehydrogenase-like--P-loop containing nucleotide triphosphate hydrolases-- 48431_48371_ 48431_48371_ A_1 E_7 5_3_2 8 A_5 B_28 E_87 --A_73 B_255 E_3951 -- 52540_50729_99999 endc_99999 NOTPDB CPL Lipovitellin-phosvitin complex, superhelical domain--ARM repeat-- 48371_56112_ 48371_56112_ A_1 E_104 6_3_3 105 A_73 B_255 E_3951 --A_114 B_971 E_9319 -- endn_49562_99999 64268_endc_99999 INPDB CPL ARM repeat--Protein kinase-like (PK-like)-- 55874_46946_ 55874_46946_ A_15 E_2 4_2_2 17 A_178 B_2970 E_398 --A_48 B_219 E_75 -- endn_99999 54211_99999 INPDB CPL ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase--S13-like H2TH domain-- 52922_53850_ 52922_53850_ A_1 E_1 3_2_1 2 A_105 B_497 E_111 --A_257 B_5627 E_740 -- 52518_99999 endc NOTPDB CPL TK C-terminal domain-like--Periplasmic binding protein-like II-- 46785_55753_ 46785_55753_ A_1 E_1 4_2_2 2 A_1241 B_7979 E_2143 --A_1 B_17 E_251 -- endn_55753 endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Actin depolymerizing proteins-- 57850_57667_ 57850_57667_ A_1 E_23 8_4_4 24 A_19 B_52 E_3605 --A_23 B_24 E_4849 -- endn_57667_57850_99999 57667_endc_57783_99999 NOTPDB CPL RING finger domain, C3HC4--C2H2 and C2HC zinc fingers-- 46626_52540_ 46626_52540_ A_1 E_2 4_2_2 3 A_40 B_894 E_220 --A_2129 B_14320 E_12913 -- 52540_endn endc_99999 NOTPDB CPL Cytochrome c--P-loop containing nucleotide triphosphate hydrolases-- 55920_46785_ 55920_46785_ A_17 E_51 4_2_2 68 A_50 B_337 E_200 --A_1241 B_7979 E_2143 -- endn_99999 endc_99999 INPDB CPL Creatinase/aminopeptidase--"Winged helix" DNA-binding domain-- 56112_46785_ 56112_46785_ A_1 E_9 3_1_2 10 A_114 B_971 E_9319 --A_1241 B_7979 E_2143 -- endn endc_99999 NOTPDB CPL Protein kinase-like (PK-like)--"Winged helix" DNA-binding domain-- 54791_54791_ 54791_54791_ A_3 E_262 12_7_5 265 A_38 B_130 E_562 --A_38 B_130 E_562 -- 54928_54791_endn_52833_48508_54814_99999 56281_54791_endc_54814_99999 INPDB RPT Eukaryotic type KH-domain (eKH-domain)--Eukaryotic type KH-domain (eKH-domain)-- 50974_50960_ 50974_50960_ A_1 E_1 3_1_2 2 A_28 B_71 E_18 --A_34 B_192 E_75 -- endn 82171_99999 NOTPDB CPL Nitrous oxide reductase, N-terminal domain--TolB, C-terminal domain-- 53137_55315_ 53137_55315_ A_33 E_31 5_3_2 64 A_72 B_204 E_155 --A_69 B_239 E_475 -- endn_55481_99999 endc_99999 INPDB CPL Translational machinery components--L30e-like-- 54862_52540_ 54862_52540_ A_14 E_7 6_2_4 21 A_411 B_743 E_103 --A_2129 B_14320 E_12913 -- endn_99999 52540_53795_endc_99999 NOTPDB CPL 4Fe-4S ferredoxins--P-loop containing nucleotide triphosphate hydrolases-- 54001_54001_ 54001_54001_ A_1 E_8 7_3_4 9 A_60 B_262 E_1838 --A_60 B_262 E_1838 -- 54001_endn_99999 52540_54001_endc_49758 NOTPDB RPT Cysteine proteinases--Cysteine proteinases-- 47473_50998_ 47473_50998_ A_1 E_1 4_2_2 2 A_51 B_190 E_2808 --A_73 B_392 E_284 -- endn_99999 endc_99999 NOTPDB CPL EF-hand--Quinoprotein alcohol dehydrogenase-like-- 54236_53822_ 54236_53822_ A_1 E_2 3_1_2 3 A_18 B_81 E_1815 --A_49 B_1285 E_794 -- endn endc_99999 NOTPDB CPL Ubiquitin-like--Periplasmic binding protein-like I-- 55945_55945_ 55945_55945_ A_21 E_42 6_3_3 63 A_33 B_39 E_74 --A_33 B_39 E_74 -- endn_74650_99999 51161_endc_99999 INPDB RPT TATA-box binding protein-like--TATA-box binding protein-like-- 54285_52540_ 54285_52540_ A_6 E_10 4_1_3 16 A_56 B_179 E_39 --A_2129 B_14320 E_12913 -- endn 81271_endc_99999 NOTPDB CPL MoaD/ThiS--P-loop containing nucleotide triphosphate hydrolases-- 52047_52047_ 52047_52047_ A_1 E_72 18_7_11 73 A_9 B_93 E_2576 --A_9 B_93 E_2576 -- 52047_81383_52540_endn_52058_52075_99999 52540_49299_47473_endc_57196_52047_53795_52058_81606_56112_99999 NOTPDB RPT RNI-like--RNI-like-- 54585_52540_ 54585_52540_ A_39 E_47 7_4_3 86 A_42 B_8 E_91 --A_2129 B_14320 E_12913 -- 52540_endn_99999_50692 52540_endc_99999 INPDB CPL Cdc48 domain 2-like--P-loop containing nucleotide triphosphate hydrolases-- 53383_49503_ 53383_49503_ A_1 E_1 3_2_1 2 A_367 B_2974 E_1139 --A_81 B_368 E_450 -- endn_99999 endc NOTPDB CPL PLP-dependent transferases--Cupredoxins-- 50249_56300_ 50249_56300_ A_9 E_1 4_2_2 10 A_390 B_2734 E_1438 --A_170 B_837 E_750 -- endn_99999 endc_99999 NOTPDB CPL Nucleic acid-binding proteins--Metallo-dependent phosphatases-- 52540_51717_ 52540_51717_ A_1 E_1 3_1_2 2 A_2129 B_14320 E_12913 --A_77 B_207 E_36 -- endn endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Dihydropteroate synthetase-like-- 47954_47954_ 47954_47954_ A_32 E_343 11_7_4 375 A_52 B_42 E_726 --A_52 B_42 E_726 -- 81383_endn_57903_56672_57783_56112_99999 52540_51735_endc_99999 INPDB RPT Cyclin-like--Cyclin-like-- 75689_75689_ 75689_75689_ A_17 E_28 6_3_3 45 A_18 E_53 --A_18 E_53 -- 48295_endn_99999 75689_endc_99999 NOTPDB RPT Zinc-binding domain of translation initiation factor 2 beta--Zinc-binding domain of translation initiation factor 2 beta-- 46626_46785_ 46626_46785_ A_1 E_1 3_1_2 2 A_40 B_894 E_220 --A_1241 B_7979 E_2143 -- endn endc_46785 NOTPDB CPL Cytochrome c--"Winged helix" DNA-binding domain-- 46785_48452_ 46785_48452_ A_1 E_1 4_2_2 2 A_1241 B_7979 E_2143 --A_146 B_1937 E_3442 -- 52540_endn 56322_99999 NOTPDB CPL "Winged helix" DNA-binding domain--TPR-like-- 52047_52540_ 52047_52540_ A_2 E_42 8_5_3 44 A_9 B_93 E_2576 --A_2129 B_14320 E_12913 -- 52047_52540_endn_52058_99999 52047_endc_99999 NOTPDB CPL RNI-like--P-loop containing nucleotide triphosphate hydrolases-- BC 483 81827_54534_ 81827_54534_ B_116 E_2 10_3_7 118 A_4 B_245 E_11 --A_32 B_599 E_266 -- endn_51283_99999 46626_51126_54534_48452_endc_81827_99999 INPDB CPL Porin chaperone SurA, peptide-binding domain--FKBP-like-- 55486_51120_ 55486_51120_ B_9 E_3 4_1_3 12 A_64 B_735 E_1617 --B_123 E_18 -- endn 50882_endc_99999 INPDB CPL Metalloproteases ("zincins"), catalytic domain--Serralysin-like metalloprotease, C-terminal domain-- 55073_51569_ 55073_51569_ B_1 E_1 4_2_2 2 A_5 B_639 E_400 --A_136 B_1089 E_356 -- 99999_55785 endc_99999 NOTPDB CPL Adenylyl and guanylyl cyclase catalytic domain--Aldolase-- 52540_56796_ 52540_56796_ B_2 E_1 3_2_1 3 A_2129 B_14320 E_12913 --A_47 B_341 E_47 -- endn_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Dehydroquinate synthase-like-- 50998_48452_ 50998_48452_ B_2 E_1 5_2_3 3 A_73 B_392 E_284 --A_146 B_1937 E_3442 -- endn_99999 53335_endc_99999 NOTPDB CPL Quinoprotein alcohol dehydrogenase-like--TPR-like-- 51735_53756_ 51735_53756_ B_1 E_1 3_2_1 2 A_993 B_8798 E_3827 --A_262 B_1575 E_1122 -- endn_99999 endc NOTPDB CPL NAD(P)-binding Rossmann-fold domains--UDP-Glycosyltransferase/glycogen phosphorylase-- 51735_51230_ 51735_51230_ B_1 E_1 4_2_2 2 A_993 B_8798 E_3827 --A_35 B_1330 E_195 -- endn_51246 endc_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Single hybrid motif-- 54292_63380_ 54292_63380_ B_55 E_2 4_2_2 57 A_44 B_565 E_187 --A_34 B_499 E_327 -- endn_99999 endc_52343 INPDB CPL 2Fe-2S ferredoxin-like--Riboflavin synthase domain-like-- 50331_52540_ 50331_52540_ B_9 E_1 5_3_2 10 A_61 B_521 E_45 --A_2129 B_14320 E_12913 -- 51230_52540_53795 endc_99999 NOTPDB CPL MOP-like--P-loop containing nucleotide triphosphate hydrolases-- 63418_53623_ 63418_53623_ B_155 E_2 8_5_3 157 B_167 E_6 --A_21 B_536 E_49 -- endn_56784_56601_69125_99999 endc_99999_53244 INPDB CPL MurE/MurF N-terminal domain--MurD-like peptide ligases, catalytic domain-- 48029_48029_ 48029_48029_ B_55 E_1 5_3_2 56 A_4 B_170 E_39 --A_4 B_170 E_39 -- 48029_endn_99999 48029_endc NOTPDB RPT FliG--FliG-- 69572_51735_ 69572_51735_ B_5 E_8 4_2_2 13 A_24 B_156 E_175 --A_993 B_8798 E_3827 -- endn_99999 endc_99999 NOTPDB CPL Molybdenum cofactor biosynthesis protein MoeB--NAD(P)-binding Rossmann-fold domains-- 52540_52402_ 52540_52402_ B_31 E_1 7_4_3 32 A_2129 B_14320 E_12913 --A_350 B_1402 E_436 -- 52540_endn_52833_99999 52540_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Adenine nucleotide alpha hydrolases-like-- 53098_53098_ 53098_53098_ B_4 E_93 10_4_6 97 A_290 B_2494 E_2335 --A_290 B_2494 E_2335 -- endn_56672_53098_99999 52047_51569_56672_endc_53098_99999 NOTPDB RPT Ribonuclease H-like--Ribonuclease H-like-- 52833_46785_ 52833_46785_ B_1 E_6 4_2_2 7 A_220 B_2517 E_2068 --A_1241 B_7979 E_2143 -- endn_99999 endc_99999 NOTPDB CPL Thioredoxin-like--"Winged helix" DNA-binding domain-- 56235_53474_ 56235_53474_ B_1 E_1 3_1_2 2 A_157 B_611 E_596 --A_141 B_2949 E_2909 -- endn endc_99999 NOTPDB CPL N-terminal nucleophile aminohydrolases (Ntn hydrolases)--alpha/beta-Hydrolases-- 52172_52540_ 52172_52540_ B_218 E_3 11_4_7 221 A_85 B_3166 E_241 --A_2129 B_14320 E_12913 -- 46934_endn_46689_99999 52540_46894_endc_48283_46785_99999_46689 NOTPDB CPL CheY-like--P-loop containing nucleotide triphosphate hydrolases-- 52047_52058_ 52047_52058_ B_1 E_85 19_11_8 86 A_9 B_93 E_2576 --A_6 B_143 E_2568 -- 53649_81383_46626_52047_52540_endn_50729_52058_52075_53098_99999 52047_52540_52058_81606_52075_endc_56112_99999 NOTPDB CPL RNI-like--L domain-like-- 81296_50952_ 81296_50952_ B_6 E_1 3_2_1 7 A_40 B_404 E_1207 --A_7 B_167 E_70 -- endn_99999 endc NOTPDB CPL E set domains--Soluble quinoprotein glucose dehydrogenase-- 51206_46785_ 51206_46785_ B_267 E_9 8_4_4 276 A_2 B_447 E_467 --A_1241 B_7979 E_2143 -- endn_48452_55785_99999 51206_53448_endc_99999 INPDB CPL cAMP-binding domain-like--"Winged helix" DNA-binding domain-- 53335_53955_ 53335_53955_ B_1 E_1 3_2_1 2 A_733 B_3918 E_2070 --A_9 B_652 E_194 -- endn_99999 endc NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--Lysozyme-like-- 54534_54534_ 54534_54534_ B_31 E_32 11_5_6 63 A_32 B_599 E_266 --A_32 B_599 E_266 -- endn_54534_47473_81827_99999 53335_54534_48452_47473_endc_99999 INPDB RPT FKBP-like--FKBP-like-- 81296_63825_ 81296_63825_ B_4 E_1 4_2_2 5 A_40 B_404 E_1207 --A_7 B_35 E_205 -- endn_99999 endc_99999 NOTPDB CPL E set domains--Low density lipoprotein (LDL) receptor YWTD domain-- 50475_50475_ 50475_50475_ B_7 E_1 5_3_2 8 A_59 B_417 E_63 --A_59 B_417 E_63 -- endn_50324_99999 63380_endc NOTPDB RPT FMN-binding split barrel--FMN-binding split barrel-- 51182_46689_ 51182_46689_ B_116 E_2 9_5_4 118 A_107 B_1063 E_385 --A_246 B_4125 E_4002 -- endn_48329_51182_51679_46689 48371_endc_99999_46689 NOTPDB CPL RmlC-like cupins--Homeodomain-like-- 51445_51261_ 51445_51261_ B_26 E_24 5_2_3 50 A_89 B_1646 E_1474 --A_11 B_271 E_40 -- endn_99999 51230_endc_46785 NOTPDB CPL (Trans)glycosidases--Duplicated hybrid motif-- 49363_56300_ 49363_56300_ B_26 E_66 6_3_3 92 A_1 B_28 E_74 --A_170 B_837 E_750 -- 49363_endn_99999 51126_endc_99999 INPDB CPL Purple acid phosphatase, N-terminal domain--Metallo-dependent phosphatases-- 46785_46626_ 46785_46626_ B_2 E_1 3_1_2 3 A_1241 B_7979 E_2143 --A_40 B_894 E_220 -- endn 46626_endc NOTPDB CPL "Winged helix" DNA-binding domain--Cytochrome c-- 56112_52540_ 56112_52540_ B_47 E_37 7_3_4 84 A_114 B_971 E_9319 --A_2129 B_14320 E_12913 -- 52540_endn_99999 52540_75569_endc_99999 NOTPDB CPL Protein kinase-like (PK-like)--P-loop containing nucleotide triphosphate hydrolases-- 46689_57716_ 46689_57716_ B_1 E_19 4_2_2 20 A_246 B_4125 E_4002 --A_72 B_426 E_2067 -- endn_99999 57667_99999 NOTPDB CPL Homeodomain-like--Glucocorticoid receptor-like (DNA-binding domain)-- 57884_46689_ 57884_46689_ B_43 E_1 3_1_2 44 B_51 E_4 --A_246 B_4125 E_4002 -- endn 53155_46689 NOTPDB CPL Ada DNA repair protein, N-terminal domain (N-Ada 10)--Homeodomain-like-- 52317_51366_ 52317_51366_ B_1 E_7 4_2_2 8 A_204 B_1244 E_262 --A_289 B_986 E_160 -- endn_99999 51366_endc INPDB CPL Class I glutamine amidotransferase-like--Ribulose-phoshate binding barrel-- 54980_52540_ 54980_52540_ B_7 E_1 4_3_1 8 A_28 B_403 E_157 --A_2129 B_14320 E_12913 -- 50447_54980_99999 endc NOTPDB CPL EF-G/eEF-2 domains III and V--P-loop containing nucleotide triphosphate hydrolases-- 63825_51004_ 63825_51004_ B_1 E_1 4_2_2 2 A_7 B_35 E_205 --A_2 B_13 E_266 -- endn_99999 endc_99999 NOTPDB CPL Low density lipoprotein (LDL) receptor YWTD domain--C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase-- 48239_53649_ 48239_53649_ B_4 E_1 3_1_2 5 A_29 B_94 E_322 --A_60 B_683 E_430 -- endn endc_99999 NOTPDB CPL Terpenoid cylases/Protein prenyltransferases--Alkaline phosphatase-like-- 49265_81296_ 49265_81296_ B_1 E_1 4_2_2 2 A_23 B_135 E_1734 --A_40 B_404 E_1207 -- endn_99999 81296_49265 NOTPDB CPL Fibronectin type III--E set domains-- 46626_48452_ 46626_48452_ B_1 E_1 3_1_2 2 A_40 B_894 E_220 --A_146 B_1937 E_3442 -- endn 46894_99999 NOTPDB CPL Cytochrome c--TPR-like-- 51215_46689_ 51215_46689_ B_205 E_5 6_4_2 210 A_1 B_240 E_12 --A_246 B_4125 E_4002 -- endn_48329_49785_99999 endc_46689 NOTPDB CPL Regulatory protein AraC--Homeodomain-like-- 52540_54631_ 52540_54631_ B_2 E_1 4_2_2 3 A_2129 B_14320 E_12913 --A_209 B_782 E_239 -- endn_99999 54631_endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--CBS-domain-- 51695_51717_ 51695_51717_ B_2 E_1 3_2_1 3 A_5 B_143 E_312 --A_77 B_207 E_36 -- endn_99999 endc NOTPDB CPL Phosphatidylinositol-specific phospholipase C (PI-PLC)--Dihydropteroate synthetase-like-- 53756_53067_ 53756_53067_ B_1 E_6 4_2_2 7 A_262 B_1575 E_1122 --A_176 B_1667 E_1029 -- 53067_endn 53067_endc NOTPDB CPL UDP-Glycosyltransferase/glycogen phosphorylase--Actin-like ATPase domain-- 48452_53756_ 48452_53756_ B_17 E_13 9_5_4 30 A_146 B_1937 E_3442 --A_262 B_1575 E_1122 -- 53448_endn_53756_48452_99999 53335_53756_endc_48439 NOTPDB CPL TPR-like--UDP-Glycosyltransferase/glycogen phosphorylase-- 47473_52833_ 47473_52833_ B_4 E_1 4_2_2 5 A_51 B_190 E_2808 --A_220 B_2517 E_2068 -- endn_99999 endc_99999 NOTPDB CPL EF-hand--Thioredoxin-like-- 48452_52540_ 48452_52540_ B_25 E_6 8_5_3 31 A_146 B_1937 E_3442 --A_2129 B_14320 E_12913 -- endn_46894_48403_48452_99999 52540_endc_99999 NOTPDB CPL TPR-like--P-loop containing nucleotide triphosphate hydrolases-- 51230_52777_ 51230_52777_ B_6 E_21 3_2_1 27 A_35 B_1330 E_195 --A_10 B_418 E_328 -- endn_99999 endc NOTPDB CPL Single hybrid motif--CoA-dependent acyltransferases-- 49482_49464_ 49482_49464_ B_3 E_1 5_2_3 4 A_2 B_98 E_31 --A_30 B_195 E_96 -- endn_99999 49464_endc_99999 NOTPDB CPL Aromatic compound dioxygenase--Carboxypeptidase D, a regulatory domain-- 52218_52218_ 52218_52218_ B_1 E_1 3_1_2 2 A_110 B_706 E_157 --A_110 B_706 E_157 -- endn 63380_99999 NOTPDB RPT Flavoproteins--Flavoproteins-- 46557_54534_ 46557_54534_ B_115 E_4 5_4_1 119 B_116 E_5 --A_32 B_599 E_266 -- endn_48371_52335_99999 endc INPDB CPL GreA transcript cleavage protein, N-terminal domain--FKBP-like-- 46894_53474_ 46894_53474_ B_2 E_1 3_2_1 3 A_87 B_1032 E_48 --A_141 B_2949 E_2909 -- endn_99999 endc NOTPDB CPL C-terminal effector domain of the bipartite response regulators--alpha/beta-Hydrolases-- 53383_53822_ 53383_53822_ B_1 E_1 3_1_2 2 A_367 B_2974 E_1139 --A_49 B_1285 E_794 -- endn endc_53850 NOTPDB CPL PLP-dependent transferases--Periplasmic binding protein-like I-- 56935_52540_ 56935_52540_ B_1 E_1 3_1_2 2 B_1350 E_155 --A_2129 B_14320 E_12913 -- endn endc_99999 NOTPDB CPL Porins--P-loop containing nucleotide triphosphate hydrolases-- 47781_52113_ 47781_52113_ B_91 E_1 6_4_2 92 A_49 B_595 E_68 --A_1 B_117 E_366 -- 50249_endn_47781_99999 52113_endc INPDB CPL RuvA domain 2-like--BRCT domain-- 56935_56925_ 56935_56925_ B_5 E_2 4_2_2 7 B_1350 E_155 --A_2 B_435 E_26 -- endn_99999 endc_99999 NOTPDB CPL Porins--OMPA-like-- 46689_51735_ 46689_51735_ B_16 E_1 4_2_2 17 A_246 B_4125 E_4002 --A_993 B_8798 E_3827 -- endn_51735 endc_99999 NOTPDB CPL Homeodomain-like--NAD(P)-binding Rossmann-fold domains-- 48113_52540_ 48113_52540_ B_1 E_1 3_2_1 2 A_2 B_55 E_453 --A_2129 B_14320 E_12913 -- 54621_endn endc NOTPDB CPL Heme-dependent peroxidases--P-loop containing nucleotide triphosphate hydrolases-- 52540_53659_ 52540_53659_ B_1 E_1 3_2_1 2 A_2129 B_14320 E_12913 --A_31 B_204 E_123 -- 52540_endn endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Isocitrate/Isopropylmalate dehydrogenases-- 81901_48452_ 81901_48452_ B_5 E_3 8_4_4 8 B_153 E_123 --A_146 B_1937 E_3442 -- 81901_endn_48452_99999 46894_48452_endc_99999 NOTPDB CPL Cysteine rich protein B (HcpB)--TPR-like-- 48576_48576_ 48576_48576_ B_2 E_1 3_2_1 3 A_32 B_270 E_227 --A_32 B_270 E_227 -- endn_48239 endc NOTPDB RPT Terpenoid synthases--Terpenoid synthases-- 48371_48431_ 48371_48431_ B_1 E_7 6_3_3 8 A_73 B_255 E_3951 --A_5 B_28 E_87 -- 50952_48371_99999 46626_endc_99999 NOTPDB CPL ARM repeat--Lipovitellin-phosvitin complex, superhelical domain-- 49611_52540_ 49611_52540_ B_1 E_2 4_2_2 3 A_18 B_143 E_192 --A_2129 B_14320 E_12913 -- endn_99999 endc_99999 NOTPDB CPL Viral coat and capsid proteins--P-loop containing nucleotide triphosphate hydrolases-- 81624_46946_ 81624_46946_ B_95 E_15 4_2_2 110 B_105 E_21 --A_48 B_219 E_75 -- endn_99999 57716_99999 INPDB CPL N-terminal domain of MutM-like DNA repair proteins--S13-like H2TH domain-- 53850_55021_ 53850_55021_ B_21 E_1 4_2_2 22 A_257 B_5627 E_740 --A_109 B_662 E_147 -- endn_48600 endc_99999 NOTPDB CPL Periplasmic binding protein-like II--Regulatory domain in the aminoacid metabolism-- 48403_48403_ 48403_48403_ B_6 E_114 12_5_7 120 A_4 B_168 E_2348 --A_4 B_168 E_2348 -- 52540_endn_48403_50814_99999 52540_47769_57903_48403_56399_endc_99999 NOTPDB RPT Ankyrin repeat--Ankyrin repeat-- 52540_54637_ 52540_54637_ B_1 E_2 6_3_3 3 A_2129 B_14320 E_12913 --A_51 B_906 E_213 -- 52540_endn_99999 endc_99999_53850 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Thioesterase/thiol ester dehydrase-isomerase-- 50621_50621_ 50621_50621_ B_3 E_1 4_2_2 4 A_14 B_268 E_63 --A_14 B_268 E_63 -- endn_51419 endc_99999 NOTPDB RPT Alanine racemase-like, C-terminal domain--Alanine racemase-like, C-terminal domain-- 56529_56529_ 56529_56529_ B_3 E_1 3_1_2 4 A_28 B_204 E_72 --A_28 B_204 E_72 -- endn endc_53720 INPDB RPT FAH--FAH-- 56784_56784_ 56784_56784_ B_7 E_10 4_2_2 17 A_230 B_1745 E_1267 --A_230 B_1745 E_1267 -- endn_99999 endc_99999 NOTPDB RPT HAD-like--HAD-like-- 52540_53850_ 52540_53850_ B_2 E_1 4_2_2 3 A_2129 B_14320 E_12913 --A_257 B_5627 E_740 -- 50249_99999 endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Periplasmic binding protein-like II-- 52833_51905_ 52833_51905_ B_31 E_4 7_3_4 35 A_220 B_2517 E_2068 --A_358 B_2910 E_1243 -- endn_52833_52172 55424_52833_endc_99999 INPDB CPL Thioredoxin-like--FAD/NAD(P)-binding domain-- 53795_53795_ 53795_53795_ B_7 E_3 5_3_2 10 A_421 B_3843 E_485 --A_421 B_3843 E_485 -- 52540_endn_99999 52540_endc NOTPDB RPT PEP carboxykinase-like--PEP carboxykinase-like-- 56327_52540_ 56327_52540_ B_1 E_1 3_1_2 2 A_21 B_204 E_156 --A_2129 B_14320 E_12913 -- endn endc_99999 NOTPDB CPL Lactate & malate dehydrogenases, C-terminal domain--P-loop containing nucleotide triphosphate hydrolases-- 50978_63825_ 50978_63825_ B_1 E_15 8_3_5 16 A_7 B_101 E_3576 --A_7 B_35 E_205 -- 50969_endn_99999 50960_48452_endc_50998_99999 NOTPDB CPL WD40-repeat--Low density lipoprotein (LDL) receptor YWTD domain-- 46894_46785_ 46894_46785_ B_11 E_1 5_2_3 12 A_87 B_1032 E_48 --A_1241 B_7979 E_2143 -- endn_48452 endc_63520_99999 NOTPDB CPL C-terminal effector domain of the bipartite response regulators--"Winged helix" DNA-binding domain-- 46689_55136_ 46689_55136_ B_56 E_2 3_2_1 58 A_246 B_4125 E_4002 --A_14 B_151 E_12 -- endn_46689 endc INPDB CPL Homeodomain-like--Probable bacterial effector-binding domain-- 50156_52096_ 50156_52096_ B_112 E_6 8_3_5 118 A_28 B_534 E_1380 --A_96 B_1208 E_331 -- 53254_50156_99999 46626_47090_48452_endc_99999 INPDB CPL PDZ domain-like--ClpP/crotonase-- 57850_53335_ 57850_53335_ B_4 E_1 3_1_2 5 A_19 B_52 E_3605 --A_733 B_3918 E_2070 -- endn endc_99999 NOTPDB CPL RING finger domain, C3HC4--S-adenosyl-L-methionine-dependent methyltransferases-- 48439_53955_ 48439_53955_ B_1 E_1 3_2_1 2 A_48 B_249 E_670 --A_9 B_652 E_194 -- 48435_99999 endc NOTPDB CPL Protein prenylyltransferase--Lysozyme-like-- 51735_81324_ 51735_81324_ B_3 E_1 3_1_2 4 A_993 B_8798 E_3827 --A_34 B_130 E_1059 -- endn 51735_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Voltage-gated potassium channels-- 52540_51726_ 52540_51726_ B_1 E_1 4_2_2 2 A_2129 B_14320 E_12913 --A_52 B_158 E_35 -- endn_99999 52540_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Uroporphyrinogen decarboxylase, UROD-- 56176_56194_ 56176_56194_ B_87 E_2 5_3_2 89 A_43 B_454 E_248 --B_89 E_4 -- 56176_endn_99999 54593_endc INPDB CPL FAD-binding domain--Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain-- 69118_69118_ 69118_69118_ B_6 E_1 3_1_2 7 A_39 B_223 E_27 --A_39 B_223 E_27 -- endn endc_99999 NOTPDB RPT Antioxidant defence protein AhpD--Antioxidant defence protein AhpD-- 51735_50129_ 51735_50129_ B_5 E_6 7_3_4 11 A_993 B_8798 E_3827 --A_67 B_883 E_442 -- 50129_endn_99999 52047_51735_endc_99999 INPDB CPL NAD(P)-binding Rossmann-fold domains--GroES-like-- 75553_52540_ 75553_52540_ B_4 E_1 4_2_2 5 A_11 B_73 E_99 --A_2129 B_14320 E_12913 -- 52540_99999 endc_99999 NOTPDB CPL Smc hinge domain--P-loop containing nucleotide triphosphate hydrolases-- 48329_46894_ 48329_46894_ B_196 E_3 11_4_7 199 A_9 B_1007 E_45 --A_87 B_1032 E_48 -- endn_48329_55486_56935 54427_48452_54593_endc_51261_48439_99999 NOTPDB CPL RNA polymerase sigma subunit--C-terminal effector domain of the bipartite response regulators-- 50978_63829_ 50978_63829_ B_1 E_2 5_2_3 3 A_7 B_101 E_3576 --A_5 B_40 E_110 -- endn_99999 48452_endc_99999 NOTPDB CPL WD40-repeat--Diisopropylfluorophosphatase (phosphotriesterase, DFP)-- 49265_49785_ 49265_49785_ B_6 E_1 5_2_3 7 A_23 B_135 E_1734 --A_10 B_366 E_724 -- endn_49785 49785_endc_99999 NOTPDB CPL Fibronectin type III--Galactose-binding domain-like-- 48452_48371_ 48452_48371_ B_2 E_15 5_2_3 17 A_146 B_1937 E_3442 --A_73 B_255 E_3951 -- endn_99999 54928_endc_99999 NOTPDB CPL TPR-like--ARM repeat-- 52833_48452_ 52833_48452_ B_27 E_3 5_3_2 30 A_220 B_2517 E_2068 --A_146 B_1937 E_3442 -- endn_57938_99999 endc_99999 NOTPDB CPL Thioredoxin-like--TPR-like-- 51735_50814_ 51735_50814_ B_2 E_1 4_1_3 3 A_993 B_8798 E_3827 --A_14 B_98 E_391 -- endn endc_48179_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Lipocalins-- 49452_51445_ 49452_51445_ B_1 E_1 4_2_2 2 A_3 B_19 E_48 --A_89 B_1646 E_1474 -- 49452_99999 endc_99999 NOTPDB CPL Starch-binding domain--(Trans)glycosidases-- 52540_55060_ 52540_55060_ B_2 E_1 3_2_1 3 A_2129 B_14320 E_12913 --A_83 B_250 E_130 -- 54211_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--GHMP Kinase-- 47473_52540_ 47473_52540_ B_1 E_52 6_3_3 53 A_51 B_190 E_2808 --A_2129 B_14320 E_12913 -- 52540_endn_99999 52540_endc_99999 NOTPDB CPL EF-hand--P-loop containing nucleotide triphosphate hydrolases-- 50993_50978_ 50993_50978_ B_1 E_2 3_1_2 3 A_3 B_71 E_74 --A_7 B_101 E_3576 -- endn endc_99999 NOTPDB CPL Prolyl oligopeptidase, N-terminal domain--WD40-repeat-- 54106_54106_ 54106_54106_ B_88 E_18 13_6_7 106 B_368 E_99 --B_368 E_99 -- 51230_endn_54106_51445_53955_99999 54106_53822_53474_endc_51445_53187_99999 NOTPDB RPT LysM domain--LysM domain-- 47031_52540_ 47031_52540_ B_1 E_1 3_2_1 2 B_13 E_440 --A_2129 B_14320 E_12913 -- endn_99999 endc NOTPDB CPL Second domain of FERM--P-loop containing nucleotide triphosphate hydrolases-- 57783_56731_ 57783_56731_ B_117 E_2 6_2_4 119 A_193 B_620 E_393 --A_33 B_179 E_8 -- endn_99999 51294_48024_endc_99999 NOTPDB CPL Zinc beta-ribbon--DNA primase DnaG catalytic core-- 48371_56300_ 48371_56300_ B_1 E_1 4_2_2 2 A_73 B_255 E_3951 --A_170 B_837 E_750 -- endn_48371 53795_endc NOTPDB CPL ARM repeat--Metallo-dependent phosphatases-- 69065_54768_ 69065_54768_ B_95 E_18 8_5_3 113 B_129 E_71 --A_18 B_198 E_397 -- 47072_endn_54768_69065_99999 54768_endc_99999 INPDB CPL RNase III endonuclease catalytic domain--dsRNA-binding domain-like-- 52540_81886_ 52540_81886_ B_111 E_5 5_3_2 116 A_2129 B_14320 E_12913 --B_111 E_6 -- 52540_endn_81767 endc_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--Helical scaffold and wing domains of SecA-- 51445_52540_ 51445_52540_ B_1 E_1 3_1_2 2 A_89 B_1646 E_1474 --A_2129 B_14320 E_12913 -- endn 52540_endc NOTPDB CPL (Trans)glycosidases--P-loop containing nucleotide triphosphate hydrolases-- 63433_56529_ 63433_56529_ B_9 E_14 3_2_1 23 B_9 E_18 --A_28 B_204 E_72 -- endn_99999 endc INPDB CPL Fumarylacetoacetate hydrolase, FAH, N-terminal domain--FAH-- 46626_46626_ 46626_46626_ B_188 E_11 14_7_7 199 A_40 B_894 E_220 --A_40 B_894 E_220 -- 46626_endn_49503_56003_46785_47741_99999 81496_46626_52799_48695_endc_75420_99999 INPDB RPT Cytochrome c--Cytochrome c-- 55620_55620_ 55620_55620_ B_10 E_11 4_2_2 21 A_26 B_318 E_66 --A_26 B_318 E_66 -- endn_99999 55083_endc INPDB RPT Tetrahydrobiopterin biosynthesis enzymes-like--Tetrahydrobiopterin biosynthesis enzymes-like-- 46689_53474_ 46689_53474_ B_4 E_1 4_2_2 5 A_246 B_4125 E_4002 --A_141 B_2949 E_2909 -- endn_99999 endc_99999 NOTPDB CPL Homeodomain-like--alpha/beta-Hydrolases-- 50249_54814_ 50249_54814_ B_97 E_1 5_2_3 98 A_390 B_2734 E_1438 --A_82 B_390 E_98 -- endn_69705 54791_endc_54814 INPDB CPL Nucleic acid-binding proteins--Prokaryotic type KH domain (pKH-domain)-- 48329_48329_ 48329_48329_ B_52 E_1 9_3_6 53 A_9 B_1007 E_45 --A_9 B_1007 E_45 -- 47413_endn_99999 54427_46894_48452_endc_48439_99999 NOTPDB RPT RNA polymerase sigma subunit--RNA polymerase sigma subunit-- 55347_53822_ 55347_53822_ B_1 E_1 3_2_1 2 A_119 B_836 E_588 --A_49 B_1285 E_794 -- endn_99999 endc NOTPDB CPL Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain--Periplasmic binding protein-like I-- 53927_52540_ 53927_52540_ B_1 E_1 4_2_2 2 A_21 B_324 E_127 --A_2129 B_14320 E_12913 -- 52540_endn 53795_99999 NOTPDB CPL Cytidine deaminase-like--P-loop containing nucleotide triphosphate hydrolases-- 51391_53613_ 51391_53613_ B_2 E_3 5_2_3 5 A_14 B_138 E_12 --A_112 B_709 E_200 -- endn_99999 51391_endc_99999 NOTPDB CPL Thiamin phosphate synthase--Ribokinase-like-- 52777_52777_ 52777_52777_ B_139 E_113 13_7_6 252 A_10 B_418 E_328 --A_10 B_418 E_328 -- 53335_endn_56801_52777_47005_47336_99999 56801_52777_47336_endc_55729_99999 INPDB RPT CoA-dependent acyltransferases--CoA-dependent acyltransferases-- 52058_81383_ 52058_81383_ B_1 E_2 4_2_2 3 A_6 B_143 E_2568 --B_8 E_2068 -- endn_99999 52047_99999 NOTPDB CPL L domain-like--F-box domain-- 52540_53955_ 52540_53955_ B_2 E_1 5_3_2 3 A_2129 B_14320 E_12913 --A_9 B_652 E_194 -- 52540_endn_99999 52047_endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Lysozyme-like-- 51735_52518_ 51735_52518_ B_1 E_1 4_2_2 2 A_993 B_8798 E_3827 --A_239 B_1128 E_328 -- endn_99999 endc_51735 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Thiamin diphosphate-binding fold (THDP-binding)-- 52540_48371_ 52540_48371_ B_4 E_8 6_2_4 12 A_2129 B_14320 E_12913 --A_73 B_255 E_3951 -- 52540_endn 52540_48371_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--ARM repeat-- 52374_55811_ 52374_55811_ B_4 E_1 3_1_2 5 A_247 B_1540 E_642 --A_61 B_850 E_338 -- endn endc_99999 NOTPDB CPL Nucleotidylyl transferase--Nudix-- 46785_55781_ 46785_55781_ B_277 E_8 9_3_6 285 A_1241 B_7979 E_2143 --A_54 B_1030 E_131 -- endn_55781_99999 55781_53822_endc_46785_99999_69118 INPDB CPL "Winged helix" DNA-binding domain--GAF domain-like-- 53098_52540_ 53098_52540_ B_1 E_3 4_1_3 4 A_290 B_2494 E_2335 --A_2129 B_14320 E_12913 -- endn 52047_endc_99999 NOTPDB CPL Ribonuclease H-like--P-loop containing nucleotide triphosphate hydrolases-- 82714_82693_ 82714_82693_ B_135 E_3 7_3_4 138 B_354 E_19 --A_3 B_362 E_31 -- endn_82693_99999 53383_82866_endc_99999 NOTPDB CPL Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains--Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains-- 52833_50969_ 52833_50969_ B_2 E_7 4_2_2 9 A_220 B_2517 E_2068 --A_24 B_218 E_336 -- endn_99999 endc_99999 NOTPDB CPL Thioredoxin-like--YVTN repeat-like/Quinoprotein amine dehydrogenase-- 56524_81296_ 56524_81296_ B_13 E_20 7_4_3 33 A_12 B_79 E_26 --A_40 B_404 E_1207 -- endn_63380_55856_99999 55856_endc_99999 INPDB CPL Sulfite oxidase, middle catalytic domain--E set domains-- 49899_49265_ 49899_49265_ B_1 E_2 5_2_3 3 A_22 B_208 E_1314 --A_23 B_135 E_1734 -- endn_99999 endc_99999_49265 NOTPDB CPL Concanavalin A-like lectins/glucanases--Fibronectin type III-- 56112_56672_ 56112_56672_ B_1 E_2 4_2_2 3 A_114 B_971 E_9319 --A_66 B_378 E_3164 -- endn_99999 endc_56112 NOTPDB CPL Protein kinase-like (PK-like)--DNA/RNA polymerases-- 48371_49785_ 48371_49785_ B_1 E_1 4_2_2 2 A_73 B_255 E_3951 --A_10 B_366 E_724 -- endn_99999 50952_99999 NOTPDB CPL ARM repeat--Galactose-binding domain-like-- 52799_52540_ 52799_52540_ B_2 E_2 5_2_3 4 A_16 B_112 E_1201 --A_2129 B_14320 E_12913 -- endn_99999 52540_endc_99999 NOTPDB CPL (Phosphotyrosine protein) phosphatases II--P-loop containing nucleotide triphosphate hydrolases-- 53335_81799_ 53335_81799_ B_94 E_12 4_2_2 106 A_733 B_3918 E_2070 --B_104 E_21 -- endn_99999 endc_99999 INPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--Putative methyltransferase TM0872, insert domain-- 53328_50486_ 53328_50486_ B_120 E_27 9_3_6 147 A_12 B_276 E_59 --A_2 B_165 E_46 -- 56420_endn_99999 52096_51735_47336_endc_53720_99999 INPDB CPL Formyltransferase--FMT C-terminal domain-like-- 53850_53955_ 53850_53955_ B_21 E_2 5_2_3 23 A_257 B_5627 E_740 --A_9 B_652 E_194 -- endn_46785 51126_endc_99999 NOTPDB CPL Periplasmic binding protein-like II--Lysozyme-like-- 48208_49384_ 48208_49384_ B_2 E_2 3_1_2 4 A_67 B_360 E_274 --A_6 B_62 E_34 -- endn 63446_endc INPDB CPL Six-hairpin glycosyltransferases--Carbohydrate-binding domain-- 51445_81296_ 51445_81296_ B_7 E_2 5_2_3 9 A_89 B_1646 E_1474 --A_40 B_404 E_1207 -- endn_55545 56988_endc_99999 INPDB CPL (Trans)glycosidases--E set domains-- 50037_52540_ 50037_52540_ B_2 E_1 3_1_2 3 A_36 B_160 E_9 --A_2129 B_14320 E_12913 -- endn 82689_99999 NOTPDB CPL C-terminal domain of transcriptional repressors--P-loop containing nucleotide triphosphate hydrolases-- 57667_53335_ 57667_53335_ B_1 E_1 4_2_2 2 A_23 B_24 E_4849 --A_733 B_3918 E_2070 -- endn_99999 endc_99999 NOTPDB CPL C2H2 and C2HC zinc fingers--S-adenosyl-L-methionine-dependent methyltransferases-- 53383_55729_ 53383_55729_ B_1 E_1 3_1_2 2 A_367 B_2974 E_1139 --A_217 B_2438 E_800 -- endn endc_55729 NOTPDB CPL PLP-dependent transferases--Acyl-CoA N-acyltransferases (Nat)-- 81383_50985_ 81383_50985_ B_2 E_5 4_2_2 7 B_8 E_2068 --B_15 E_285 -- endn_99999 endc_99999 NOTPDB CPL F-box domain--RCC1/BLIP-II-- 52540_52156_ 52540_52156_ B_21 E_2 6_4_2 23 A_2129 B_14320 E_12913 --A_17 B_103 E_43 -- 81271_51735_46946_99999 50447_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Initiation factor IF2/eIF5b, domain 3-- 49879_49879_ 49879_49879_ B_12 E_1 8_2_6 13 A_4 B_172 E_486 --A_4 B_172 E_486 -- endn_49879 52540_53795_50494_endc_49879_99999 NOTPDB RPT SMAD/FHA domain--SMAD/FHA domain-- 55073_55073_ 55073_55073_ B_2 E_3 5_3_2 5 A_5 B_639 E_400 --A_5 B_639 E_400 -- 56112_55785_99999 endc_99999 NOTPDB RPT Adenylyl and guanylyl cyclase catalytic domain--Adenylyl and guanylyl cyclase catalytic domain-- 56519_56601_ 56519_56601_ B_175 E_4 6_3_3 179 B_229 E_7 --A_15 B_1220 E_127 -- 54427_endn_99999 54184_endc_99999 INPDB CPL Penicillin binding protein dimerisation domain--beta-Lactamase/D-ala carboxypeptidase-- 57716_57667_ 57716_57667_ B_1 E_3 5_3_2 4 A_72 B_426 E_2067 --A_23 B_24 E_4849 -- endn_46689_99999 endc_99999 NOTPDB CPL Glucocorticoid receptor-like (DNA-binding domain)--C2H2 and C2HC zinc fingers-- 51905_51971_ 51905_51971_ B_12 E_5 7_4_3 17 A_358 B_2910 E_1243 --A_47 B_404 E_155 -- endn_54292_51971_99999 endc_51971_99999 NOTPDB CPL FAD/NAD(P)-binding domain--Nucleotide-binding domain-- 53383_53633_ 53383_53633_ B_6 E_3 4_2_2 9 A_367 B_2974 E_1139 --A_84 B_449 E_69 -- 53383_endn 55021_99999 NOTPDB CPL PLP-dependent transferases--Carbamate kinase-like-- 57414_57414_ 57414_57414_ B_1 E_50 9_4_5 51 B_5 E_136 --B_5 E_136 -- endn_51445_57414_99999 50494_endc_50998_99999_57414 NOTPDB RPT Hairpin loop containing domain-like--Hairpin loop containing domain-like-- 55103_52540_ 55103_52540_ B_1 E_1 3_2_1 2 A_31 B_249 E_105 --A_2129 B_14320 E_12913 -- 56176_endn endc NOTPDB CPL FAD-linked oxidases, C-terminal domain--P-loop containing nucleotide triphosphate hydrolases-- 50249_48452_ 50249_48452_ B_1 E_10 5_3_2 11 A_390 B_2734 E_1438 --A_146 B_1937 E_3442 -- 50249_endn_99999 endc_99999 NOTPDB CPL Nucleic acid-binding proteins--TPR-like-- 48317_52821_ 48317_52821_ B_1 E_1 3_1_2 2 A_21 B_264 E_225 --A_39 B_452 E_298 -- endn endc_99999 NOTPDB CPL Acid phosphatase/Vanadium-dependent haloperoxidase--Rhodanese/Cell cycle control phosphatase-- 46565_49493_ 46565_49493_ B_28 E_2 4_2_2 30 A_12 B_326 E_827 --A_8 B_140 E_172 -- endn_99999 49493_endc NOTPDB CPL Chaperone J-domain--HSP40/DnaJ peptide-binding domain-- 57783_53335_ 57783_53335_ B_7 E_1 3_2_1 8 A_193 B_620 E_393 --A_733 B_3918 E_2070 -- endn_99999 endc NOTPDB CPL Zinc beta-ribbon--S-adenosyl-L-methionine-dependent methyltransferases-- 46946_57716_ 46946_57716_ B_95 E_3 4_2_2 98 A_48 B_219 E_75 --A_72 B_426 E_2067 -- endn_81624 endc_99999 INPDB CPL S13-like H2TH domain--Glucocorticoid receptor-like (DNA-binding domain)-- 52833_51126_ 52833_51126_ B_2 E_2 4_3_1 4 A_220 B_2517 E_2068 --A_116 B_481 E_444 -- endn_52833_99999 endc NOTPDB CPL Thioredoxin-like--Pectin lyase-like-- 55811_51391_ 55811_51391_ B_11 E_1 3_2_1 12 A_61 B_850 E_338 --A_14 B_138 E_12 -- endn_47616 endc NOTPDB CPL Nudix--Thiamin phosphate synthase-- 48452_48403_ 48452_48403_ B_1 E_3 4_2_2 4 A_146 B_1937 E_3442 --A_4 B_168 E_2348 -- endn_99999 endc_99999 NOTPDB CPL TPR-like--Ankyrin repeat-- 51735_51182_ 51735_51182_ B_6 E_1 4_2_2 7 A_993 B_8798 E_3827 --A_107 B_1063 E_385 -- endn_99999 endc_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--RmlC-like cupins-- 56112_51735_ 56112_51735_ B_1 E_2 3_2_1 3 A_114 B_971 E_9319 --A_993 B_8798 E_3827 -- endn_99999 endc NOTPDB CPL Protein kinase-like (PK-like)--NAD(P)-binding Rossmann-fold domains-- 69572_52821_ 69572_52821_ B_18 E_15 3_2_1 33 A_24 B_156 E_175 --A_39 B_452 E_298 -- endn_99999 endc NOTPDB CPL Molybdenum cofactor biosynthesis protein MoeB--Rhodanese/Cell cycle control phosphatase-- 50129_51905_ 50129_51905_ B_1 E_1 3_1_2 2 A_67 B_883 E_442 --A_358 B_2910 E_1243 -- endn 51905_99999 NOTPDB CPL GroES-like--FAD/NAD(P)-binding domain-- 53383_56059_ 53383_56059_ B_2 E_1 4_1_3 3 A_367 B_2974 E_1139 --A_192 B_1104 E_490 -- endn 46894_endc_99999 NOTPDB CPL PLP-dependent transferases--Glutathione synthetase ATP-binding domain-like-- 48452_53335_ 48452_53335_ B_13 E_4 5_3_2 17 A_146 B_1937 E_3442 --A_733 B_3918 E_2070 -- endn_50998_99999 endc_99999 NOTPDB CPL TPR-like--S-adenosyl-L-methionine-dependent methyltransferases-- 52518_51735_ 52518_51735_ B_1 E_2 4_2_2 3 A_239 B_1128 E_328 --A_993 B_8798 E_3827 -- 52467_51735 53335_endc NOTPDB CPL Thiamin diphosphate-binding fold (THDP-binding)--NAD(P)-binding Rossmann-fold domains-- 55298_55298_ 55298_55298_ B_6 E_7 6_3_3 13 A_9 B_295 E_48 --A_9 B_295 E_48 -- endn_55298_99999 endc_55298_99999 NOTPDB RPT YjgF-like--YjgF-like-- 47336_52777_ 47336_52777_ B_62 E_9 9_6_3 71 A_4 B_486 E_88 --A_10 B_418 E_328 -- 53335_endn_56801_51735_47336_99999 52777_endc_99999 NOTPDB CPL ACP-like--CoA-dependent acyltransferases-- 57701_52540_ 57701_52540_ B_10 E_1 5_1_4 11 A_9 B_13 E_379 --A_2129 B_14320 E_12913 -- endn 52540_53795_51604_99999 NOTPDB CPL Zn2/Cys6 DNA-binding domain--P-loop containing nucleotide triphosphate hydrolases-- 81296_50969_ 81296_50969_ B_5 E_16 4_2_2 21 A_40 B_404 E_1207 --A_24 B_218 E_336 -- endn_99999 endc_69279 NOTPDB CPL E set domains--YVTN repeat-like/Quinoprotein amine dehydrogenase-- 52172_48283_ 52172_48283_ B_14 E_1 6_3_3 15 A_85 B_3166 E_241 --B_220 E_14 -- endn_55874_99999 endc_46689_99999 NOTPDB CPL CheY-like--FIS-like-- 46785_53697_ 46785_53697_ B_79 E_3 3_2_1 82 A_1241 B_7979 E_2143 --A_65 B_630 E_103 -- endn_99999 endc NOTPDB CPL "Winged helix" DNA-binding domain--SIS domain-- 46626_52833_ 46626_52833_ B_1 E_1 4_2_2 2 A_40 B_894 E_220 --A_220 B_2517 E_2068 -- endn_99999 endc_57938 NOTPDB CPL Cytochrome c--Thioredoxin-like-- 46894_52172_ 46894_52172_ B_3 E_1 3_2_1 4 A_87 B_1032 E_48 --A_85 B_3166 E_241 -- endn_99999 endc NOTPDB CPL C-terminal effector domain of the bipartite response regulators--CheY-like-- 52172_55073_ 52172_55073_ B_33 E_2 7_4_3 35 A_85 B_3166 E_241 --A_5 B_639 E_400 -- endn_52172_99999_55874 endc_46785_99999 NOTPDB CPL CheY-like--Adenylyl and guanylyl cyclase catalytic domain-- 56112_56112_ 56112_56112_ B_7 E_125 11_6_5 132 A_114 B_971 E_9319 --A_114 B_971 E_9319 -- 52047_endn_57095_55550_56112_99999 55681_endc_47789_56112_99999 NOTPDB RPT Protein kinase-like (PK-like)--Protein kinase-like (PK-like)-- 50022_55961_ 50022_55961_ B_66 E_5 6_3_3 71 A_37 B_275 E_102 --A_9 B_245 E_370 -- endn_53474_99999 51735_endc_99999 INPDB CPL ISP domain--Bet v1-like-- 53300_53300_ 53300_53300_ B_7 E_98 14_9_5 105 A_51 B_345 E_996 --A_51 B_345 E_996 -- endn_69848_57362_53300_57535_57196_82671_53474_99999 57196_56436_endc_53300_99999 NOTPDB RPT vWA-like--vWA-like-- 55658_53098_ 55658_53098_ B_11 E_17 5_3_2 28 B_108 E_48 --A_290 B_2494 E_2335 -- 55658_endn_99999 endc_99999 NOTPDB CPL L9 N-domain-like--Ribonuclease H-like-- 53474_49785_ 53474_49785_ B_36 E_4 6_2_4 40 A_141 B_2949 E_2909 --A_10 B_366 E_724 -- endn_81761 53795_endc_50965_99999 INPDB CPL alpha/beta-Hydrolases--Galactose-binding domain-like-- 51735_53474_ 51735_53474_ B_4 E_10 7_5_2 14 A_993 B_8798 E_3827 --A_141 B_2949 E_2909 -- 53335_50129_endn_51735_99999 endc_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--alpha/beta-Hydrolases-- 51445_49785_ 51445_49785_ B_15 E_43 9_6_3 58 A_89 B_1646 E_1474 --A_10 B_366 E_724 -- 55545_endn_49303_48113_51445_99999 49785_endc_99999 NOTPDB CPL (Trans)glycosidases--Galactose-binding domain-like-- 75138_53795_ 75138_53795_ B_41 E_1 4_2_2 42 A_4 B_98 E_2 --A_421 B_3843 E_485 -- 53795_endn 75138_endc INPDB CPL HPr kinase/phoshatase HprK N-terminal domain--PEP carboxykinase-like-- 55785_55890_ 55785_55890_ B_6 E_1 5_4_1 7 A_168 B_1284 E_394 --B_18 E_2 -- endn_55781_50494_99999 endc NOTPDB CPL PYP-like sensor domain (PAS domain)--Sporulation responce regulatory protein Spo0B-- 51391_52540_ 51391_52540_ B_1 E_1 4_2_2 2 A_14 B_138 E_12 --A_2129 B_14320 E_12913 -- endn_99999 endc_46689 NOTPDB CPL Thiamin phosphate synthase--P-loop containing nucleotide triphosphate hydrolases-- 74853_74853_ 74853_74853_ B_1 E_2 5_2_3 3 A_1 B_10 E_76 --A_1 B_10 E_76 -- 47655_endn endc_50974_99999 NOTPDB RPT Lamin A/C globular tail domain--Lamin A/C globular tail domain-- 49899_49899_ 49899_49899_ B_9 E_257 20_13_7 266 A_22 B_208 E_1314 --A_22 B_208 E_1314 -- 52540_55957_endn_49899_53613_57184_57196_53383_49785_53822_56496_49313_99999 57196_49899_63446_52440_56496_endc_99999 INPDB RPT Concanavalin A-like lectins/glucanases--Concanavalin A-like lectins/glucanases-- 81502_50022_ 81502_50022_ B_21 E_21 3_2_1 42 A_3 B_32 E_34 --A_37 B_275 E_102 -- endn_99999 endc INPDB CPL Iron-sulfur subunit (ISP) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane region--ISP domain-- 51182_53098_ 51182_53098_ B_1 E_1 4_2_2 2 A_107 B_1063 E_385 --A_290 B_2494 E_2335 -- endn_51182 endc_46689 NOTPDB CPL RmlC-like cupins--Ribonuclease H-like-- 81901_81901_ 81901_81901_ B_42 E_42 11_5_6 84 B_153 E_123 --B_153 E_123 -- 81901_57440_endn_64501_99999 46626_81901_48452_48557_endc_99999 NOTPDB RPT Cysteine rich protein B (HcpB)--Cysteine rich protein B (HcpB)-- 54334_52540_ 54334_52540_ B_2 E_1 6_3_3 3 A_3 B_50 E_36 --A_2129 B_14320 E_12913 -- 52540_endn_49611 53795_54334_endc NOTPDB CPL Superantigen toxins, C-terminal domain--P-loop containing nucleotide triphosphate hydrolases-- 53850_48403_ 53850_48403_ B_2 E_2 3_1_2 4 A_257 B_5627 E_740 --A_4 B_168 E_2348 -- endn endc_99999 NOTPDB CPL Periplasmic binding protein-like II--Ankyrin repeat-- 56801_53474_ 56801_53474_ B_2 E_3 3_2_1 5 A_139 B_882 E_563 --A_141 B_2949 E_2909 -- endn_99999 endc NOTPDB CPL Firefly luciferase-like--alpha/beta-Hydrolases-- 48695_48695_ 48695_48695_ B_7 E_1 4_2_2 8 A_18 B_378 E_163 --A_18 B_378 E_163 -- endn_99999 endc_99999 NOTPDB RPT Multiheme cytochromes--Multiheme cytochromes-- 63825_50998_ 63825_50998_ B_1 E_1 4_2_2 2 A_7 B_35 E_205 --A_73 B_392 E_284 -- 50978_99999 endc_99999 NOTPDB CPL Low density lipoprotein (LDL) receptor YWTD domain--Quinoprotein alcohol dehydrogenase-like-- 50814_56784_ 50814_56784_ B_2 E_4 4_2_2 6 A_14 B_98 E_391 --A_230 B_1745 E_1267 -- 55021_81665 endc_99999 NOTPDB CPL Lipocalins--HAD-like-- 53901_52151_ 53901_52151_ B_95 E_20 9_3_6 115 A_95 B_891 E_374 --B_266 E_103 -- endn_50129_53901 54637_53901_endc_47336_55048_99999 NOTPDB CPL Thiolase-like--FabD/lysophospholipase-like-- 52540_53927_ 52540_53927_ B_1 E_2 4_2_2 3 A_2129 B_14320 E_12913 --A_21 B_324 E_127 -- endn_99999 52540_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Cytidine deaminase-like-- 51905_47473_ 51905_47473_ B_1 E_3 4_2_2 4 A_358 B_2910 E_1243 --A_51 B_190 E_2808 -- 51735_99999 endc_99999 NOTPDB CPL FAD/NAD(P)-binding domain--EF-hand-- 53756_51735_ 53756_51735_ B_2 E_3 5_2_3 5 A_262 B_1575 E_1122 --A_993 B_8798 E_3827 -- 53448_endn endc_48179_99999 NOTPDB CPL UDP-Glycosyltransferase/glycogen phosphorylase--NAD(P)-binding Rossmann-fold domains-- 54001_48452_ 54001_48452_ B_4 E_3 4_2_2 7 A_60 B_262 E_1838 --A_146 B_1937 E_3442 -- endn_99999 endc_48439 NOTPDB CPL Cysteine proteinases--TPR-like-- 52266_52266_ 52266_52266_ B_7 E_4 4_2_2 11 A_1 B_380 E_396 --A_1 B_380 E_396 -- endn_99999 endc_99999 NOTPDB RPT Esterase/acetylhydrolase--Esterase/acetylhydrolase-- 52075_52058_ 52075_52058_ B_1 E_4 6_3_3 5 B_3 E_104 --A_6 B_143 E_2568 -- endn_52058_99999 52058_56112_99999 NOTPDB CPL Outer arm dynein light chain 1--L domain-like-- 82051_52540_ 82051_52540_ B_98 E_30 8_4_4 128 B_98 E_37 --A_2129 B_14320 E_12913 -- endn_47473_82199_99999 54928_52540_endc_99999 INPDB CPL Obg GTP-binding protein N-terminal domain--P-loop containing nucleotide triphosphate hydrolases-- 52172_46689_ 52172_46689_ B_16 E_14 6_3_3 30 A_85 B_3166 E_241 --A_246 B_4125 E_4002 -- endn_55874_99999 endc_46689_99999 NOTPDB CPL CheY-like--Homeodomain-like-- 50022_51905_ 50022_51905_ B_3 E_21 4_2_2 24 A_37 B_275 E_102 --A_358 B_2910 E_1243 -- endn_99999 55424_endc NOTPDB CPL ISP domain--FAD/NAD(P)-binding domain-- 55486_49354_ 55486_49354_ B_2 E_1 4_2_2 3 A_64 B_735 E_1617 --A_2 B_95 E_314 -- endn_99999 endc_99999 NOTPDB CPL Metalloproteases ("zincins"), catalytic domain--PapD-like-- 55781_53822_ 55781_53822_ B_1 E_1 4_2_2 2 A_54 B_1030 E_131 --A_49 B_1285 E_794 -- 46785_99999 endc_99999 NOTPDB CPL GAF domain-like--Periplasmic binding protein-like I-- 51735_47336_ 51735_47336_ B_67 E_4 9_3_6 71 A_993 B_8798 E_3827 --A_4 B_486 E_88 -- 50129_51735_99999 53901_52777_53474_47336_endc_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--ACP-like-- 56349_56349_ 56349_56349_ B_1 E_1 3_2_1 2 A_59 B_801 E_85 --A_59 B_801 E_85 -- 99999_47823 endc NOTPDB RPT DNA breaking-rejoining enzymes--DNA breaking-rejoining enzymes-- 75516_46894_ 75516_46894_ B_45 E_1 3_2_1 46 B_47 E_1 --A_87 B_1032 E_48 -- endn_99999 endc INPDB CPL Pheromone-binding domain of LuxR-like quorum-sensing transcription factors--C-terminal effector domain of the bipartite response regulators-- 56281_51735_ 56281_51735_ B_1 E_1 4_2_2 2 A_273 B_950 E_318 --A_993 B_8798 E_3827 -- endn_99999 endc_99999 NOTPDB CPL Metallo-hydrolase/oxidoreductase--NAD(P)-binding Rossmann-fold domains-- 49344_49344_ 49344_49344_ B_1 E_2 4_2_2 3 B_5 E_57 --B_5 E_57 -- 51445_57567 49344_endc NOTPDB RPT CBD9-like--CBD9-like-- 52172_46785_ 52172_46785_ B_38 E_3 3_2_1 41 A_85 B_3166 E_241 --A_1241 B_7979 E_2143 -- endn_99999 endc NOTPDB CPL CheY-like--"Winged helix" DNA-binding domain-- 53850_51735_ 53850_51735_ B_8 E_1 3_1_2 9 A_257 B_5627 E_740 --A_993 B_8798 E_3827 -- endn endc_99999 NOTPDB CPL Periplasmic binding protein-like II--NAD(P)-binding Rossmann-fold domains-- 56954_52540_ 56954_52540_ B_1 E_1 3_2_1 2 B_451 E_40 --A_2129 B_14320 E_12913 -- 51230_52540 endc NOTPDB CPL Integral outer membrane protein TolC, efflux pump component--P-loop containing nucleotide triphosphate hydrolases-- 53474_53335_ 53474_53335_ B_10 E_1 3_2_1 11 A_141 B_2949 E_2909 --A_733 B_3918 E_2070 -- endn_99999 endc NOTPDB CPL alpha/beta-Hydrolases--S-adenosyl-L-methionine-dependent methyltransferases-- 52467_51905_ 52467_51905_ B_1 E_1 3_1_2 2 A_132 B_640 E_265 --A_358 B_2910 E_1243 -- endn 55424_endc NOTPDB CPL DHS-like NAD/FAD-binding domain--FAD/NAD(P)-binding domain-- 51182_56529_ 51182_56529_ B_1 E_1 3_1_2 2 A_107 B_1063 E_385 --A_28 B_204 E_72 -- endn 52833_endc NOTPDB CPL RmlC-like cupins--FAH-- 50630_50630_ 50630_50630_ B_4 E_12 5_3_2 16 A_15 B_69 E_1046 --A_15 B_69 E_1046 -- endn_57756_99999 56672_endc NOTPDB RPT Acid proteases--Acid proteases-- 50129_53901_ 50129_53901_ B_2 E_6 4_2_2 8 A_67 B_883 E_442 --A_95 B_891 E_374 -- 53901_endn 53901_52151 NOTPDB CPL GroES-like--Thiolase-like-- 56112_46689_ 56112_46689_ B_3 E_1 3_1_2 4 A_114 B_971 E_9319 --A_246 B_4125 E_4002 -- endn endc_99999 NOTPDB CPL Protein kinase-like (PK-like)--Homeodomain-like-- 50978_50969_ 50978_50969_ B_2 E_27 13_5_8 29 A_7 B_101 E_3576 --A_24 B_218 E_336 -- 81383_endn_54495_56112_99999 52540_50978_63825_48371_48452_50891_endc_99999 NOTPDB CPL WD40-repeat--YVTN repeat-like/Quinoprotein amine dehydrogenase-- 48208_49452_ 48208_49452_ B_1 E_1 3_2_1 2 A_67 B_360 E_274 --A_3 B_19 E_48 -- endn_74650 endc NOTPDB CPL Six-hairpin glycosyltransferases--Starch-binding domain-- 52540_48283_ 52540_48283_ B_116 E_4 7_6_1 120 A_2129 B_14320 E_12913 --B_220 E_14 -- 51110_endn_55781_52172_99999_55785 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--FIS-like-- 56801_47336_ 56801_47336_ B_113 E_14 11_5_6 127 A_139 B_882 E_563 --A_4 B_486 E_88 -- 75632_endn_52777_51161_99999 52777_53474_51161_endc_50998_99999 NOTPDB CPL Firefly luciferase-like--ACP-like-- 54975_52821_ 54975_52821_ B_33 E_2 6_2_4 35 A_27 B_115 E_43 --A_39 B_452 E_298 -- endn_99999 50249_48695_endc_99999 NOTPDB CPL Acylphosphatase-like--Rhodanese/Cell cycle control phosphatase-- 55785_55073_ 55785_55073_ B_104 E_6 16_7_9 110 A_168 B_1284 E_394 --A_5 B_639 E_400 -- endn_46458_55781_56019_52172_55785_99999 51569_51604_53474_64376_51419_48452_endc_55073_99999 NOTPDB CPL PYP-like sensor domain (PAS domain)--Adenylyl and guanylyl cyclase catalytic domain-- 54713_54713_ 54713_54713_ B_44 E_2 4_2_2 46 B_103 E_32 --B_103 E_32 -- endn_46934 53633_endc INPDB RPT Elongation factor Ts (EF-Ts), dimerisation domain--Elongation factor Ts (EF-Ts), dimerisation domain-- 53795_46785_ 53795_46785_ B_1 E_1 3_1_2 2 A_421 B_3843 E_485 --A_1241 B_7979 E_2143 -- endn endc_99999 NOTPDB CPL PEP carboxykinase-like--"Winged helix" DNA-binding domain-- 50370_50370_ 50370_50370_ B_1 E_4 4_2_2 5 B_67 E_219 --B_67 E_219 -- endn_99999 endc_99999 INPDB RPT Ricin B-like lectins--Ricin B-like lectins-- 53822_51126_ 53822_51126_ B_7 E_1 3_2_1 8 A_49 B_1285 E_794 --A_116 B_481 E_444 -- endn_99999 endc NOTPDB CPL Periplasmic binding protein-like I--Pectin lyase-like-- 46785_52512_ 46785_52512_ B_249 E_3 7_4_3 252 A_1241 B_7979 E_2143 --A_33 B_474 E_94 -- 51569_endn_46689_51261 53738_endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Phosphosugar isomerase-- 48403_48452_ 48403_48452_ B_1 E_43 5_2_3 44 A_4 B_168 E_2348 --A_146 B_1937 E_3442 -- endn_99999 52540_endc_99999 NOTPDB CPL Ankyrin repeat--TPR-like-- 51445_51735_ 51445_51735_ B_2 E_1 3_1_2 3 A_89 B_1646 E_1474 --A_993 B_8798 E_3827 -- endn 52279_99999 NOTPDB CPL (Trans)glycosidases--NAD(P)-binding Rossmann-fold domains-- 57903_52540_ 57903_52540_ B_15 E_6 7_3_4 21 A_56 B_38 E_1435 --A_2129 B_14320 E_12913 -- endn_57903_99999 52540_endc_46600_99999 NOTPDB CPL FYVE/PHD zinc finger--P-loop containing nucleotide triphosphate hydrolases-- 52343_54292_ 52343_54292_ B_75 E_3 4_2_2 78 A_34 B_384 E_315 --A_44 B_565 E_187 -- 63380_99999 endc_99999 INPDB CPL Ferredoxin reductase-like, C-terminal NADP-linked domain--2Fe-2S ferredoxin-like-- 53927_53927_ 53927_53927_ B_12 E_12 3_1_2 24 A_21 B_324 E_127 --A_21 B_324 E_127 -- endn endc_99999 INPDB RPT Cytidine deaminase-like--Cytidine deaminase-like-- 57850_48452_ 57850_48452_ B_1 E_6 5_2_3 7 A_19 B_52 E_3605 --A_146 B_1937 E_3442 -- endn_99999 endc_99999_57850 NOTPDB CPL RING finger domain, C3HC4--TPR-like-- 46785_56672_ 46785_56672_ B_2 E_3 4_1_3 5 A_1241 B_7979 E_2143 --A_66 B_378 E_3164 -- endn endc_99999_53098 NOTPDB CPL "Winged helix" DNA-binding domain--DNA/RNA polymerases-- 54980_54980_ 54980_54980_ B_182 E_16 6_3_3 198 A_28 B_403 E_157 --A_28 B_403 E_157 -- 52540_endn_50447 52540_endc_99999 NOTPDB RPT EF-G/eEF-2 domains III and V--EF-G/eEF-2 domains III and V-- 51971_51905_ 51971_51905_ B_7 E_17 9_3_6 24 A_47 B_404 E_155 --A_358 B_2910 E_1243 -- endn_46548_99999 55424_54373_51395_endc_51971_99999 INPDB CPL Nucleotide-binding domain--FAD/NAD(P)-binding domain-- 55174_55120_ 55174_55120_ B_336 E_31 8_4_4 367 A_41 B_733 E_129 --A_48 B_598 E_185 -- 52540_endn_50729_99999 51658_55120_endc_99999 INPDB CPL Alpha-L RNA-binding motif--Pseudouridine synthase-- 49265_51055_ 49265_51055_ B_9 E_1 6_4_2 10 A_23 B_135 E_1734 --A_4 B_66 E_8 -- endn_51445_99999_49265 51055_endc NOTPDB CPL Fibronectin type III--Carbohydrate binding domain-- 55846_55846_ 55846_55846_ B_1 E_5 4_2_2 6 B_142 E_52 --B_142 E_52 -- endn_99999 55846_endc NOTPDB RPT N-acetylmuramoyl-L-alanine amidase-like--N-acetylmuramoyl-L-alanine amidase-like-- 53383_48452_ 53383_48452_ B_1 E_2 3_1_2 3 A_367 B_2974 E_1139 --A_146 B_1937 E_3442 -- endn 48452_99999 NOTPDB CPL PLP-dependent transferases--TPR-like-- 49785_49785_ 49785_49785_ B_31 E_105 19_12_7 136 A_10 B_366 E_724 --A_10 B_366 E_724 -- 57196_50249_54211_endn_49785_49503_53590_49854_51445_49265_55486_99999 49785_48726_49899_49303_endc_51445_99999 NOTPDB RPT Galactose-binding domain-like--Galactose-binding domain-like-- 47240_56784_ 47240_56784_ B_5 E_1 3_2_1 6 A_126 B_660 E_337 --A_230 B_1745 E_1267 -- 81653_99999 endc NOTPDB CPL Ferritin-like--HAD-like-- 56112_50998_ 56112_50998_ B_5 E_1 3_2_1 6 A_114 B_971 E_9319 --A_73 B_392 E_284 -- endn_99999 endc NOTPDB CPL Protein kinase-like (PK-like)--Quinoprotein alcohol dehydrogenase-like-- 56731_52540_ 56731_52540_ B_6 E_2 6_3_3 8 A_33 B_179 E_8 --A_2129 B_14320 E_12913 -- endn_57756_99999 52540_endc_99999 NOTPDB CPL DNA primase DnaG catalytic core--P-loop containing nucleotide triphosphate hydrolases-- 56672_52540_ 56672_52540_ B_2 E_12 3_2_1 14 A_66 B_378 E_3164 --A_2129 B_14320 E_12913 -- endn_56672 endc NOTPDB CPL DNA/RNA polymerases--P-loop containing nucleotide triphosphate hydrolases-- 53383_53383_ 53383_53383_ B_45 E_18 7_3_4 63 A_367 B_2974 E_1139 --A_367 B_2974 E_1139 -- endn_46785_99999 53067_53633_endc_99999 NOTPDB RPT PLP-dependent transferases--PLP-dependent transferases-- 53098_51735_ 53098_51735_ B_1 E_1 3_2_1 2 A_290 B_2494 E_2335 --A_993 B_8798 E_3827 -- endn_99999 endc NOTPDB CPL Ribonuclease H-like--NAD(P)-binding Rossmann-fold domains-- 52058_52058_ 52058_52058_ B_1 E_216 16_9_7 217 A_6 B_143 E_2568 --A_6 B_143 E_2568 -- 52047_52540_51110_endn_52058_48056_52075_53098_99999 52047_81321_48726_52058_endc_56112_99999 NOTPDB RPT L domain-like--L domain-like-- 50044_50044_ 50044_50044_ B_19 E_216 12_7_5 235 A_2 B_84 E_1671 --A_2 B_84 E_1671 -- 64268_endn_49464_50044_55550_57850_99999 50044_endc_55550_49265_99999 NOTPDB RPT SH3-domain--SH3-domain-- 81923_52540_ 81923_52540_ B_206 E_22 6_2_4 228 A_1 B_223 E_50 --A_2129 B_14320 E_12913 -- endn_99999 52540_56954_endc_99999 INPDB CPL Double Clp-N motif--P-loop containing nucleotide triphosphate hydrolases-- 54556_51445_ 54556_51445_ B_1 E_3 5_2_3 4 A_2 B_23 E_41 --A_89 B_1646 E_1474 -- endn_51445 51445_51011_99999 NOTPDB CPL Chitinase insertion domain--(Trans)glycosidases-- 51445_56112_ 51445_56112_ B_1 E_4 6_3_3 5 A_89 B_1646 E_1474 --A_114 B_971 E_9319 -- 53901_endn_99999 endc_51445_99999 NOTPDB CPL (Trans)glycosidases--Protein kinase-like (PK-like)-- 46689_53155_ 46689_53155_ B_28 E_1 4_2_2 29 A_246 B_4125 E_4002 --A_7 B_98 E_8 -- 57884_46689 46894_46767 NOTPDB CPL Homeodomain-like--Methylated DNA-protein cysteine methyltransferase domain-- 53335_53448_ 53335_53448_ B_4 E_1 5_2_3 5 A_733 B_3918 E_2070 --A_346 B_1868 E_1125 -- endn_53756 53448_endc_99999 NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--Nucleotide-diphospho-sugar transferases-- 82714_82866_ 82714_82866_ B_318 E_9 9_5_4 327 B_354 E_19 --A_45 B_639 E_196 -- endn_47648_82714_82693_99999 56954_47852_endc_99999 INPDB CPL Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains--Multidrug efflux transporter AcrB transmembrane domain-- 51351_51735_ 51351_51735_ B_2 E_1 4_2_2 3 A_27 B_137 E_57 --A_993 B_8798 E_3827 -- endn_51735 endc_99999 NOTPDB CPL Triosephosphate isomerase (TIM)--NAD(P)-binding Rossmann-fold domains-- 52540_55174_ 52540_55174_ B_1 E_1 3_1_2 2 A_2129 B_14320 E_12913 --A_41 B_733 E_129 -- endn 55120_endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Alpha-L RNA-binding motif-- 52317_46689_ 52317_46689_ B_98 E_2 5_3_2 100 A_204 B_1244 E_262 --A_246 B_4125 E_4002 -- 52499_endn_99999 endc_46689 NOTPDB CPL Class I glutamine amidotransferase-like--Homeodomain-like-- 49313_49313_ 49313_49313_ B_6 E_648 12_6_6 654 A_3 B_17 E_754 --A_3 B_17 E_754 -- endn_57184_51735_49313_49265_99999 51120_49899_endc_49313_49354_99999 INPDB RPT Cadherin--Cadherin-- 47769_53335_ 47769_53335_ B_1 E_1 3_1_2 2 A_6 B_20 E_633 --A_733 B_3918 E_2070 -- endn endc_99999 NOTPDB CPL SAM/Pointed domain--S-adenosyl-L-methionine-dependent methyltransferases-- 52113_52113_ 52113_52113_ B_1 E_85 9_6_3 86 A_1 B_117 E_366 --A_1 B_117 E_366 -- 52113_endn_56784_48403_47781_99999 52113_endc_99999 INPDB RPT BRCT domain--BRCT domain-- 55785_46689_ 55785_46689_ B_14 E_1 4_2_2 15 A_168 B_1284 E_394 --A_246 B_4125 E_4002 -- endn_99999 endc_46689 NOTPDB CPL PYP-like sensor domain (PAS domain)--Homeodomain-like-- 51395_51735_ 51395_51735_ B_2 E_1 4_2_2 3 A_111 B_849 E_252 --A_993 B_8798 E_3827 -- endn_56059 endc_99999 NOTPDB CPL FMN-linked oxidoreductases--NAD(P)-binding Rossmann-fold domains-- 46626_48371_ 46626_48371_ B_2 E_1 4_2_2 3 A_40 B_894 E_220 --A_73 B_255 E_3951 -- endn_99999 48371_endc NOTPDB CPL Cytochrome c--ARM repeat-- 53098_56112_ 53098_56112_ B_1 E_1 3_2_1 2 A_290 B_2494 E_2335 --A_114 B_971 E_9319 -- endn_46689 endc NOTPDB CPL Ribonuclease H-like--Protein kinase-like (PK-like)-- 53187_49464_ 53187_49464_ B_1 E_55 10_5_5 56 A_105 B_1042 E_648 --A_30 B_195 E_96 -- 63501_endn_49785_49464_99999 49299_50044_endc_99999_53187 INPDB CPL Zn-dependent exopeptidases--Carboxypeptidase D, a regulatory domain-- 56672_51569_ 56672_51569_ B_1 E_13 6_4_2 14 A_66 B_378 E_3164 --A_136 B_1089 E_356 -- endn_47220_51569_99999 endc_99999 NOTPDB CPL DNA/RNA polymerases--Aldolase-- 63999_63862_ 63999_63862_ B_19 E_17 4_3_1 36 A_18 B_62 E_32 --A_1 B_20 E_23 -- 55811_endn_99999 endc INPDB CPL Thiamin pyrophosphokinase, catalytic domain--Thiamin pyrophosphokinase, substrate-binding domain-- 52374_55174_ 52374_55174_ B_107 E_13 3_2_1 120 A_247 B_1540 E_642 --A_41 B_733 E_129 -- endn_99999 endc INPDB CPL Nucleotidylyl transferase--Alpha-L RNA-binding motif-- 56112_49899_ 56112_49899_ B_2 E_2 5_2_3 4 A_114 B_971 E_9319 --A_22 B_208 E_1314 -- endn_99999 endc_99999_56112 NOTPDB CPL Protein kinase-like (PK-like)--Concanavalin A-like lectins/glucanases-- 51055_51055_ 51055_51055_ B_10 E_1 6_3_3 11 A_4 B_66 E_8 --A_4 B_66 E_8 -- 51445_49265_99999 endc_51445_99999 NOTPDB RPT Carbohydrate binding domain--Carbohydrate binding domain-- 46689_48498_ 46689_48498_ B_60 E_1 4_2_2 61 A_246 B_4125 E_4002 --B_61 E_5 -- endn_99999 endc_99999 INPDB CPL Homeodomain-like--Tetracyclin repressor-like, C-terminal domain-- 46785_51306_ 46785_51306_ B_65 E_2 3_2_1 67 A_1241 B_7979 E_2143 --A_28 B_363 E_78 -- endn_53218 endc INPDB CPL "Winged helix" DNA-binding domain--LexA/Signal peptidase-- 53686_54631_ 53686_54631_ B_12 E_16 4_1_3 28 A_91 B_529 E_203 --A_209 B_782 E_239 -- endn 54631_endc_99999 NOTPDB CPL Tryptophan synthase beta subunit-like PLP-dependent enzymes--CBS-domain-- 51905_51395_ 51905_51395_ B_10 E_10 8_4_4 20 A_358 B_2910 E_1243 --A_111 B_849 E_252 -- endn_46548_51971_99999 endc_54862_53244_99999 INPDB CPL FAD/NAD(P)-binding domain--FMN-linked oxidoreductases-- 51735_53448_ 51735_53448_ B_1 E_1 3_1_2 2 A_993 B_8798 E_3827 --A_346 B_1868 E_1125 -- endn 51161_endc NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Nucleotide-diphospho-sugar transferases-- 51206_52540_ 51206_52540_ B_3 E_2 4_2_2 5 A_2 B_447 E_467 --A_2129 B_14320 E_12913 -- endn_99999 endc_99999 NOTPDB CPL cAMP-binding domain-like--P-loop containing nucleotide triphosphate hydrolases-- 52540_54980_ 52540_54980_ B_31 E_3 6_3_3 34 A_2129 B_14320 E_12913 --A_28 B_403 E_157 -- endn_51182_50447 54211_54980_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--EF-G/eEF-2 domains III and V-- 53474_53474_ 53474_53474_ B_34 E_45 9_4_5 79 A_141 B_2949 E_2909 --A_141 B_2949 E_2909 -- endn_53474_47336_99999 50969_53474_endc_53098_99999 NOTPDB RPT alpha/beta-Hydrolases--alpha/beta-Hydrolases-- 47090_47090_ 47090_47090_ B_32 E_2 10_5_5 34 A_5 B_242 E_88 --A_5 B_242 E_88 -- 51230_endn_47090_51445_99999 55166_47090_endc_50974_99999 NOTPDB RPT PGBD-like--PGBD-like-- 51283_51283_ 51283_51283_ B_8 E_3 5_2_3 11 A_25 B_160 E_82 --A_25 B_160 E_82 -- endn_99999 endc_51283_99999 NOTPDB RPT Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase)--Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase)-- 48695_52540_ 48695_52540_ B_14 E_4 6_1_5 18 A_18 B_378 E_163 --A_2129 B_14320 E_12913 -- endn 52540_53795_51604_50447_99999 NOTPDB CPL Multiheme cytochromes--P-loop containing nucleotide triphosphate hydrolases-- 51735_51351_ 51735_51351_ B_1 E_1 4_2_2 2 A_993 B_8798 E_3827 --A_27 B_137 E_57 -- 50129_99999 51735_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Triosephosphate isomerase (TIM)-- 50249_52833_ 50249_52833_ B_1 E_1 3_2_1 2 A_390 B_2734 E_1438 --A_220 B_2517 E_2068 -- endn_99999 endc NOTPDB CPL Nucleic acid-binding proteins--Thioredoxin-like-- 55620_55083_ 55620_55083_ B_6 E_2 7_3_4 8 A_26 B_318 E_66 --B_106 E_9 -- endn_51717_55620 55083_51717_endc_99999 NOTPDB CPL Tetrahydrobiopterin biosynthesis enzymes-like--6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK-- 55781_55073_ 55781_55073_ B_39 E_1 10_6_4 40 A_54 B_1030 E_131 --A_5 B_639 E_400 -- endn_55781_52172_49879_55785_99999 51735_51395_endc_99999 NOTPDB CPL GAF domain-like--Adenylyl and guanylyl cyclase catalytic domain-- 51110_51110_ 51110_51110_ B_1 E_13 6_2_4 14 B_7 E_208 --B_7 E_208 -- endn_99999 57196_endc_57414_99999 INPDB RPT alpha-D-mannose-specific plant lectins--alpha-D-mannose-specific plant lectins-- 48726_46689_ 48726_46689_ B_1 E_1 4_2_2 2 A_14 B_78 E_4071 --A_246 B_4125 E_4002 -- endn_46689 endc_99999 NOTPDB CPL Immunoglobulin--Homeodomain-like-- 50985_50985_ 50985_50985_ B_1 E_6 7_4_3 7 B_15 E_285 --B_15 E_285 -- endn_49785_48403_99999 50630_54695_99999 NOTPDB RPT RCC1/BLIP-II--RCC1/BLIP-II-- 56436_56436_ 56436_56436_ B_1 E_244 14_9_5 245 A_2 B_62 E_1409 --A_2 B_62 E_1409 -- 57440_endn_56436_53300_49854_49265_48726_51695_99999 57196_56436_endc_49854_99999 INPDB RPT C-type lectin-like--C-type lectin-like-- 46626_81496_ 46626_81496_ B_4 E_18 4_3_1 22 A_40 B_894 E_220 --B_16 E_19 -- 46626_endn_99999 endc INPDB CPL Cytochrome c--Cytochrome c1 subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase), transmembrane anchor-- 49265_53383_ 49265_53383_ B_1 E_1 4_2_2 2 A_23 B_135 E_1734 --A_367 B_2974 E_1139 -- 48726_99999 endc_49265 NOTPDB CPL Fibronectin type III--PLP-dependent transferases-- 51161_51161_ 51161_51161_ B_7 E_2 7_4_3 9 A_81 B_714 E_168 --A_81 B_714 E_168 -- endn_51161_47336_99999 51161_endc_99999 NOTPDB RPT Trimeric LpxA-like enzymes--Trimeric LpxA-like enzymes-- 52777_56801_ 52777_56801_ B_101 E_15 8_3_5 116 A_10 B_418 E_328 --A_139 B_882 E_563 -- endn_52777_99999 53335_endc_47336_55469_99999 NOTPDB CPL CoA-dependent acyltransferases--Firefly luciferase-like-- 53474_51445_ 53474_51445_ B_1 E_1 3_1_2 2 A_141 B_2949 E_2909 --A_89 B_1646 E_1474 -- endn endc_99999 NOTPDB CPL alpha/beta-Hydrolases--(Trans)glycosidases-- 52172_48452_ 52172_48452_ B_9 E_2 4_2_2 11 A_85 B_3166 E_241 --A_146 B_1937 E_3442 -- endn_99999 endc_99999 NOTPDB CPL CheY-like--TPR-like-- 49879_56112_ 49879_56112_ B_4 E_25 5_2_3 29 A_4 B_172 E_486 --A_114 B_971 E_9319 -- endn_99999 endc_49879_99999 NOTPDB CPL SMAD/FHA domain--Protein kinase-like (PK-like)-- 57667_48452_ 57667_48452_ B_1 E_2 4_2_2 3 A_23 B_24 E_4849 --A_146 B_1937 E_3442 -- endn_99999 endc_99999 NOTPDB CPL C2H2 and C2HC zinc fingers--TPR-like-- 81324_53850_ 81324_53850_ B_3 E_151 5_2_3 154 A_34 B_130 E_1059 --A_257 B_5627 E_740 -- endn_99999 endc_53850_99999 NOTPDB CPL Voltage-gated potassium channels--Periplasmic binding protein-like II-- 52540_81767_ 52540_81767_ B_112 E_5 5_3_2 117 A_2129 B_14320 E_12913 --B_114 E_8 -- endn_50978_99999 52540_endc INPDB CPL P-loop containing nucleotide triphosphate hydrolases--Pre-protein croslinking domain of SecA-- 49482_49482_ 49482_49482_ B_3 E_2 5_3_2 5 A_2 B_98 E_31 --A_2 B_98 E_31 -- endn_49464_99999 49482_99999 NOTPDB RPT Aromatic compound dioxygenase--Aromatic compound dioxygenase-- 51445_51445_ 51445_51445_ B_11 E_42 11_5_6 53 A_89 B_1646 E_1474 --A_89 B_1646 E_1474 -- 54556_53933_endn_51445_99999 57625_54556_49785_endc_51445_99999 NOTPDB RPT (Trans)glycosidases--(Trans)glycosidases-- 46565_48452_ 46565_48452_ B_10 E_13 6_3_3 23 A_12 B_326 E_827 --A_146 B_1937 E_3442 -- endn_48452_99999 48452_endc_99999 NOTPDB CPL Chaperone J-domain--TPR-like-- 46785_48508_ 46785_48508_ B_1 E_1 3_1_2 2 A_1241 B_7979 E_2143 --A_1 B_10 E_1172 -- endn endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Nuclear receptor ligand-binding domain-- 55681_54991_ 55681_54991_ B_81 E_20 4_3_1 101 A_205 B_1250 E_450 --A_1 B_97 E_27 -- endn_46955_99999 endc INPDB CPL Class II aaRS and biotin synthetases--Anticodon-binding domain of PheRS-- 56235_52540_ 56235_52540_ B_2 E_1 5_3_2 3 A_157 B_611 E_596 --A_2129 B_14320 E_12913 -- 52540_endn_99999 endc_99999 NOTPDB CPL N-terminal nucleophile aminohydrolases (Ntn hydrolases)--P-loop containing nucleotide triphosphate hydrolases-- 53187_53187_ 53187_53187_ B_6 E_2 3_1_2 8 A_105 B_1042 E_648 --A_105 B_1042 E_648 -- endn endc_99999 NOTPDB RPT Zn-dependent exopeptidases--Zn-dependent exopeptidases-- 49265_50965_ 49265_50965_ B_1 E_13 3_1_2 14 A_23 B_135 E_1734 --A_4 B_35 E_898 -- endn endc_99999 NOTPDB CPL Fibronectin type III--Galactose oxidase, central domain-- 52833_47616_ 52833_47616_ B_388 E_590 14_6_8 978 A_220 B_2517 E_2068 --A_7 B_434 E_765 -- endn_52833_47616_55961_51713_99999 53254_47616_52374_51735_endc_47226_52833_99999 INPDB CPL Thioredoxin-like--Glutathione S-transferase (GST), C-terminal domain-- 53092_53092_ 53092_53092_ B_18 E_7 5_2_3 25 A_22 B_159 E_79 --A_22 B_159 E_79 -- endn_99999 55920_endc_99999 NOTPDB RPT Creatinase/prolidase N-terminal domain--Creatinase/prolidase N-terminal domain-- 46565_47144_ 46565_47144_ B_24 E_11 4_3_1 35 A_12 B_326 E_827 --B_24 E_19 -- endn_57850_99999 endc INPDB CPL Chaperone J-domain--HSC20 (HSCB), C-terminal oligomerisation domain-- 56112_48452_ 56112_48452_ B_13 E_19 5_3_2 32 A_114 B_971 E_9319 --A_146 B_1937 E_3442 -- endn_57802_99999 endc_99999 NOTPDB CPL Protein kinase-like (PK-like)--TPR-like-- 47336_51735_ 47336_51735_ B_2 E_1 5_3_2 3 A_4 B_486 E_88 --A_993 B_8798 E_3827 -- endn_47336_99999 endc_51735 NOTPDB CPL ACP-like--NAD(P)-binding Rossmann-fold domains-- 48150_55811_ 48150_55811_ B_38 E_5 5_2_3 43 A_68 B_400 E_107 --A_61 B_850 E_338 -- endn_99999 55811_endc_99999 NOTPDB CPL DNA-glycosylase--Nudix-- 50037_50037_ 50037_50037_ B_6 E_1 4_3_1 7 A_36 B_160 E_9 --A_36 B_160 E_9 -- endn_47979_99999 endc NOTPDB RPT C-terminal domain of transcriptional repressors--C-terminal domain of transcriptional repressors-- 52540_54160_ 52540_54160_ B_1 E_1 4_2_2 2 A_2129 B_14320 E_12913 --A_7 B_11 E_374 -- 50249_endn endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Chromo domain-like-- 49503_51126_ 49503_51126_ B_2 E_1 4_2_2 3 A_81 B_368 E_450 --A_116 B_481 E_444 -- 81464_endn endc_99999 NOTPDB CPL Cupredoxins--Pectin lyase-like-- 51395_53474_ 51395_53474_ B_2 E_1 3_1_2 3 A_111 B_849 E_252 --A_141 B_2949 E_2909 -- endn endc_99999 NOTPDB CPL FMN-linked oxidoreductases--alpha/beta-Hydrolases-- 50969_50978_ 50969_50978_ B_3 E_31 13_5_8 34 A_24 B_218 E_336 --A_7 B_101 E_3576 -- endn_50978_69304_63829_99999 50960_51004_63825_endc_50998_50974_55729_99999 NOTPDB CPL YVTN repeat-like/Quinoprotein amine dehydrogenase--WD40-repeat-- 46988_52540_ 46988_52540_ B_1 E_2 5_2_3 3 A_1 B_6 E_36 --A_2129 B_14320 E_12913 -- endn_99999 52540_50447_99999 NOTPDB CPL Tubulin chaperone cofactor A--P-loop containing nucleotide triphosphate hydrolases-- 49695_49695_ 49695_49695_ B_1 E_7 4_2_2 8 A_3 B_27 E_141 --A_3 B_27 E_141 -- endn_99999 endc_99999 NOTPDB RPT gamma-Crystallin-like--gamma-Crystallin-like-- 46548_51905_ 46548_51905_ B_1 E_6 6_3_3 7 A_125 B_477 E_67 --A_358 B_2910 E_1243 -- endn_99999_54862 endc_51395_99999 INPDB CPL alpha-helical ferredoxin--FAD/NAD(P)-binding domain-- 50685_49590_ 50685_49590_ B_4 E_89 7_4_3 93 B_61 E_121 --B_5 E_110 -- 49590_endn_51445_99999 50685_endc_99999 INPDB CPL Barwin-like endoglucanases--PHL pollen allergen-- 52047_52200_ 52047_52200_ B_1 E_6 5_3_2 7 A_9 B_93 E_2576 --A_2 B_41 E_302 -- endn_52058_99999 endc_99999 NOTPDB CPL RNI-like--Toll/Interleukin receptor TIR domain-- 81324_81296_ 81324_81296_ B_3 E_92 9_7_2 95 A_34 B_130 E_1059 --A_40 B_404 E_1207 -- endn_81296_46565_49384_50814_49265_99999 endc_99999 NOTPDB CPL Voltage-gated potassium channels--E set domains-- 55658_55653_ 55658_55653_ B_97 E_6 4_2_2 103 B_108 E_48 --A_1 B_97 E_14 -- endn_99999 endc_99999 INPDB CPL L9 N-domain-like--Ribosomal protein L9 C-domain-- 50249_47781_ 50249_47781_ B_194 E_1 8_2_6 195 A_390 B_2734 E_1438 --A_49 B_595 E_68 -- endn_56091 52113_46934_46929_endc_47781_99999 INPDB CPL Nucleic acid-binding proteins--RuvA domain 2-like-- 48371_48452_ 48371_48452_ B_3 E_22 6_4_2 25 A_73 B_255 E_3951 --A_146 B_1937 E_3442 -- endn_48371_50989_99999 endc_99999 NOTPDB CPL ARM repeat--TPR-like-- 47413_53822_ 47413_53822_ B_522 E_8 5_2_3 530 A_123 B_1973 E_199 --A_49 B_1285 E_794 -- endn_99999 51604_53613_endc INPDB CPL lambda repressor-like DNA-binding domains--Periplasmic binding protein-like I-- 55008_47240_ 55008_47240_ B_2 E_1 4_2_2 3 A_44 B_256 E_222 --A_126 B_660 E_337 -- endn_55008 81653_endc NOTPDB CPL Metal-binding domain--Ferritin-like-- 51366_51569_ 51366_51569_ B_1 E_1 4_2_2 2 A_289 B_986 E_160 --A_136 B_1089 E_356 -- endn_99999 51269_endc NOTPDB CPL Ribulose-phoshate binding barrel--Aldolase-- 52540_54752_ 52540_54752_ B_94 E_7 6_2_4 101 A_2129 B_14320 E_12913 --B_96 E_8 -- 51294_endn 47473_endc_51445_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--RecA protein, C-terminal domain-- 52151_47336_ 52151_47336_ B_6 E_1 4_2_2 7 B_266 E_103 --A_4 B_486 E_88 -- 53901_endn 53901_99999 NOTPDB CPL FabD/lysophospholipase-like--ACP-like-- 82153_82153_ 82153_82153_ B_1 E_49 8_5_3 50 A_4 B_33 E_126 --A_4 B_33 E_126 -- 82153_57196_55909_endn_99999 82153_endc_99999 INPDB RPT FAS1 domain--FAS1 domain-- 81301_81891_ 81301_81891_ B_135 E_26 5_3_2 161 A_169 B_325 E_254 --A_3 B_185 E_32 -- endn_54631_99999 endc_99999 INPDB CPL Nucleotidyltransferase--tRNA CCA-adding enzyme, C-terminal domains-- 52218_63380_ 52218_63380_ B_41 E_37 8_5_3 78 A_110 B_706 E_157 --A_34 B_499 E_327 -- 52218_endn_48264_56512_99999 endc_52343_99999 INPDB CPL Flavoproteins--Riboflavin synthase domain-like-- 53613_51391_ 53613_51391_ B_3 E_1 3_2_1 4 A_112 B_709 E_200 --A_14 B_138 E_12 -- 51391_endn endc NOTPDB CPL Ribokinase-like--Thiamin phosphate synthase-- 52540_54593_ 52540_54593_ B_1 E_1 3_1_2 2 A_2129 B_14320 E_12913 --A_36 B_950 E_142 -- endn endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase-- 50978_50974_ 50978_50974_ B_1 E_4 6_3_3 5 A_7 B_101 E_3576 --A_28 B_71 E_18 -- endn_50969_99999 50969_endc_99999 NOTPDB CPL WD40-repeat--Nitrous oxide reductase, N-terminal domain-- 52540_52467_ 52540_52467_ B_10 E_1 4_2_2 11 A_2129 B_14320 E_12913 --A_132 B_640 E_265 -- 52540_endn 52540_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--DHS-like NAD/FAD-binding domain-- 57802_53098_ 57802_53098_ B_7 E_1 4_2_2 8 A_77 B_171 E_177 --A_290 B_2494 E_2335 -- 99999_46689 endc_99999 NOTPDB CPL Rubredoxin-like--Ribonuclease H-like-- 52777_47336_ 52777_47336_ B_8 E_1 5_3_2 9 A_10 B_418 E_328 --A_4 B_486 E_88 -- endn_52777_99999 53474_endc NOTPDB CPL CoA-dependent acyltransferases--ACP-like-- 52200_52200_ 52200_52200_ B_1 E_3 5_2_3 4 A_2 B_41 E_302 --A_2 B_41 E_302 -- endn_99999 52540_endc_99999 NOTPDB RPT Toll/Interleukin receptor TIR domain--Toll/Interleukin receptor TIR domain-- 51445_51055_ 51445_51055_ B_2 E_1 3_1_2 3 A_89 B_1646 E_1474 --A_4 B_66 E_8 -- endn 51055_endc NOTPDB CPL (Trans)glycosidases--Carbohydrate binding domain-- 54534_48452_ 54534_48452_ B_1 E_68 6_4_2 69 A_32 B_599 E_266 --A_146 B_1937 E_3442 -- endn_54534_81827_99999 endc_99999 INPDB CPL FKBP-like--TPR-like-- 55545_51445_ 55545_51445_ B_43 E_30 12_5_7 73 B_66 E_37 --A_89 B_1646 E_1474 -- endn_49611_49384_51445_99999 52799_55545_49785_47082_81296_endc_99999 INPDB CPL beta-N-acetylhexosaminidase-like domain--(Trans)glycosidases-- 53335_50249_ 53335_50249_ B_2 E_1 4_2_2 3 A_733 B_3918 E_2070 --A_390 B_2734 E_1438 -- endn_53335 endc_99999 NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--Nucleic acid-binding proteins-- 53955_53955_ 53955_53955_ B_2 E_4 6_2_4 6 A_9 B_652 E_194 --A_9 B_652 E_194 -- endn_53955 54106_endc_99999_53955 NOTPDB RPT Lysozyme-like--Lysozyme-like-- 81891_52540_ 81891_52540_ B_1 E_1 4_2_2 2 A_3 B_185 E_32 --A_2129 B_14320 E_12913 -- endn_54495 endc_99999 NOTPDB CPL tRNA CCA-adding enzyme, C-terminal domains--P-loop containing nucleotide triphosphate hydrolases-- 46785_46689_ 46785_46689_ B_11 E_1 6_2_4 12 A_1241 B_7979 E_2143 --A_246 B_4125 E_4002 -- endn_99999 endc_99999_53098_46689 NOTPDB CPL "Winged helix" DNA-binding domain--Homeodomain-like-- 52540_47473_ 52540_47473_ B_1 E_57 8_4_4 58 A_2129 B_14320 E_12913 --A_51 B_190 E_2808 -- 50969_endn_46774_99999 52540_82051_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--EF-hand-- 51717_47644_ 51717_47644_ B_46 E_13 4_2_2 59 A_77 B_207 E_36 --A_19 B_54 E_14 -- 82282_endn 52242_56507 NOTPDB CPL Dihydropteroate synthetase-like--Methionine synthase domain-- 46689_52833_ 46689_52833_ B_1 E_1 4_2_2 2 A_246 B_4125 E_4002 --A_220 B_2517 E_2068 -- endn_99999 endc_99999 NOTPDB CPL Homeodomain-like--Thioredoxin-like-- 56672_56672_ 56672_56672_ B_1 E_37 14_9_5 38 A_66 B_378 E_3164 --A_66 B_378 E_3164 -- 52540_81383_47220_endn_82199_53098_50630_56219_99999 52540_81442_endc_53098_99999 NOTPDB RPT DNA/RNA polymerases--DNA/RNA polymerases-- 48452_50044_ 48452_50044_ B_2 E_3 3_1_2 5 A_146 B_1937 E_3442 --A_2 B_84 E_1671 -- endn endc_99999 NOTPDB CPL TPR-like--SH3-domain-- 50939_50939_ 50939_50939_ B_3 E_12 12_6_6 15 A_3 B_134 E_129 --A_3 B_134 E_129 -- 50993_endn_50939_50370_99999_49265 57180_75011_49299_50939_endc_99999 NOTPDB RPT Sialidases (neuraminidases)--Sialidases (neuraminidases)-- 56317_52402_ 56317_52402_ B_34 E_1 3_1_2 35 A_34 B_296 E_127 --A_350 B_1402 E_436 -- endn endc_99999 NOTPDB CPL Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase--Adenine nucleotide alpha hydrolases-like-- 57716_52540_ 57716_52540_ B_90 E_6 6_2_4 96 A_72 B_426 E_2067 --A_2129 B_14320 E_12913 -- endn_99999 52540_53795_endc_46600 NOTPDB CPL Glucocorticoid receptor-like (DNA-binding domain)--P-loop containing nucleotide triphosphate hydrolases-- 53756_53448_ 53756_53448_ B_5 E_2 4_1_3 7 A_262 B_1575 E_1122 --A_346 B_1868 E_1125 -- endn 53448_endc_99999 NOTPDB CPL UDP-Glycosyltransferase/glycogen phosphorylase--Nucleotide-diphospho-sugar transferases-- 56091_52540_ 56091_52540_ B_2 E_1 3_1_2 3 A_34 B_180 E_92 --A_2129 B_14320 E_12913 -- endn 52540_endc NOTPDB CPL DNA ligase/mRNA capping enzyme, catalytic domain--P-loop containing nucleotide triphosphate hydrolases-- 51905_52833_ 51905_52833_ B_7 E_2 5_3_2 9 A_358 B_2910 E_1243 --A_220 B_2517 E_2068 -- endn_52833_99999 endc_99999 NOTPDB CPL FAD/NAD(P)-binding domain--Thioredoxin-like-- 52540_53448_ 52540_53448_ B_1 E_1 3_1_2 2 A_2129 B_14320 E_12913 --A_346 B_1868 E_1125 -- endn 52540_50370 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Nucleotide-diphospho-sugar transferases-- 52058_56112_ 52058_56112_ B_4 E_82 9_6_3 86 A_6 B_143 E_2568 --A_114 B_971 E_9319 -- 52047_endn_52058_57184_52075_99999 48150_endc_99999 NOTPDB CPL L domain-like--Protein kinase-like (PK-like)-- 51717_51695_ 51717_51695_ B_7 E_2 4_2_2 9 A_77 B_207 E_36 --A_5 B_143 E_312 -- endn_99999 endc_99999 NOTPDB CPL Dihydropteroate synthetase-like--Phosphatidylinositol-specific phospholipase C (PI-PLC)-- 54364_55200_ 54364_55200_ B_98 E_9 5_3_2 107 A_3 B_98 E_10 --A_1 B_98 E_19 -- endn_52954_99999 endc_99999 NOTPDB CPL Translation initiation factor IF3, N-terminal domain--Translation initiation factor IF3, C-terminal domain-- 52540_53383_ 52540_53383_ B_5 E_1 4_3_1 6 A_2129 B_14320 E_12913 --A_367 B_2974 E_1139 -- 52540_endn_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--PLP-dependent transferases-- 81296_81296_ 81296_81296_ B_48 E_233 15_10_5 281 A_40 B_404 E_1207 --A_40 B_404 E_1207 -- endn_81296_57701_49417_49265_47576_49384_50974_99999_56935 81296_49384_endc_51445_99999 INPDB RPT E set domains--E set domains-- 57903_53335_ 57903_53335_ B_3 E_28 5_3_2 31 A_56 B_38 E_1435 --A_733 B_3918 E_2070 -- endn_57903_99999 endc_99999 NOTPDB CPL FYVE/PHD zinc finger--S-adenosyl-L-methionine-dependent methyltransferases-- 54427_54427_ 54427_54427_ B_2 E_2 3_2_1 4 A_11 B_446 E_248 --A_11 B_446 E_248 -- 52218_endn endc NOTPDB RPT NTF2-like--NTF2-like-- 53187_47672_ 53187_47672_ B_1 E_50 5_3_2 51 A_105 B_1042 E_648 --B_1 E_54 -- endn_52025_99999 endc_99999 INPDB CPL Zn-dependent exopeptidases--Transferrin receptor ectodomain, C-terminal domain-- 47336_53474_ 47336_53474_ B_52 E_4 9_6_3 56 A_4 B_486 E_88 --A_141 B_2949 E_2909 -- 53335_56801_52777_47336_51735_99999 53474_51735_endc NOTPDB CPL ACP-like--alpha/beta-Hydrolases-- 53822_53850_ 53822_53850_ B_1 E_31 6_3_3 32 A_49 B_1285 E_794 --A_257 B_5627 E_740 -- 53383_endn_99999 81324_endc_99999 NOTPDB CPL Periplasmic binding protein-like I--Periplasmic binding protein-like II-- 49785_51445_ 49785_51445_ B_9 E_19 8_3_5 28 A_10 B_366 E_724 --A_89 B_1646 E_1474 -- endn_49785_99999 49464_49344_endc_52279_99999 NOTPDB CPL Galactose-binding domain-like--(Trans)glycosidases-- 53474_51905_ 53474_51905_ B_1 E_3 3_1_2 4 A_141 B_2949 E_2909 --A_358 B_2910 E_1243 -- endn 54373_99999 NOTPDB CPL alpha/beta-Hydrolases--FAD/NAD(P)-binding domain-- 53822_52540_ 53822_52540_ B_2 E_1 4_2_2 3 A_49 B_1285 E_794 --A_2129 B_14320 E_12913 -- endn_48024 52540_endc NOTPDB CPL Periplasmic binding protein-like I--P-loop containing nucleotide triphosphate hydrolases-- 46785_50729_ 46785_50729_ B_2 E_2 4_2_2 4 A_1241 B_7979 E_2143 --A_14 B_44 E_3057 -- endn_50729 endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--PH domain-like-- 52172_46894_ 52172_46894_ B_142 E_3 8_5_3 145 A_85 B_3166 E_241 --A_87 B_1032 E_48 -- endn_52172_52821_55874_99999 48452_endc_99999 NOTPDB CPL CheY-like--C-terminal effector domain of the bipartite response regulators-- 52743_52025_ 52743_52025_ B_21 E_29 5_3_2 50 A_34 B_214 E_253 --A_6 B_44 E_200 -- endn_54897_99999 endc_99999 NOTPDB CPL Subtilisin-like--Transferrin receptor ectodomain, apical domain-- 57467_57467_ 57467_57467_ B_2 E_40 8_5_3 42 A_2 B_8 E_358 --A_2 B_8 E_358 -- 50242_endn_57467_57283_99999 57467_endc_99999 INPDB RPT Ovomucoid/PCI-1 like inhibitors--Ovomucoid/PCI-1 like inhibitors-- 52540_48295_ 52540_48295_ B_100 E_1 5_4_1 101 A_2129 B_14320 E_12913 --A_6 B_147 E_13 -- 52540_49695_endn_99999 endc INPDB CPL P-loop containing nucleotide triphosphate hydrolases--TrpR-like-- 47413_51306_ 47413_51306_ B_64 E_1 4_3_1 65 A_123 B_1973 E_199 --A_28 B_363 E_78 -- 47413_endn_99999 endc NOTPDB CPL lambda repressor-like DNA-binding domains--LexA/Signal peptidase-- 47473_47473_ 47473_47473_ B_8 E_186 12_7_5 194 A_51 B_190 E_2808 --A_51 B_190 E_2808 -- 46966_51045_endn_50729_47473_47661_99999 48695_47473_endc_51695_99999 INPDB RPT EF-hand--EF-hand-- 49464_56935_ 49464_56935_ B_21 E_1 7_5_2 22 A_30 B_195 E_96 --B_1350 E_155 -- 54928_endn_47729_63570_99999 endc_99999 NOTPDB CPL Carboxypeptidase D, a regulatory domain--Porins-- 47831_52009_ 47831_52009_ B_109 E_2 7_5_2 111 B_111 E_6 --A_27 B_221 E_13 -- 53223_endn_55594_55781_99999 51621_endc INPDB CPL Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain--Phosphohistidine domain-- 46689_53067_ 46689_53067_ B_1 E_2 5_3_2 3 A_246 B_4125 E_4002 --A_176 B_1667 E_1029 -- 81343_endn_99999 53067_endc NOTPDB CPL Homeodomain-like--Actin-like ATPase domain-- 53850_53383_ 53850_53383_ B_1 E_1 3_2_1 2 A_257 B_5627 E_740 --A_367 B_2974 E_1139 -- endn_46785 endc NOTPDB CPL Periplasmic binding protein-like II--PLP-dependent transferases-- 56112_51126_ 56112_51126_ B_1 E_3 4_3_1 4 A_114 B_971 E_9319 --A_116 B_481 E_444 -- endn_49899_99999 endc NOTPDB CPL Protein kinase-like (PK-like)--Pectin lyase-like-- 51445_50370_ 51445_50370_ B_3 E_4 5_3_2 7 A_89 B_1646 E_1474 --B_67 E_219 -- endn_69349_99999 endc_99999 INPDB CPL (Trans)glycosidases--Ricin B-like lectins-- 53383_55904_ 53383_55904_ B_68 E_3 6_4_2 71 A_367 B_2974 E_1139 --B_70 E_6 -- endn_53756_52172_99999 52768_endc INPDB CPL PLP-dependent transferases--Ornithine decarboxylase C-terminal domain-- 46689_48726_ 46689_48726_ B_1 E_1 4_2_2 2 A_246 B_4125 E_4002 --A_14 B_78 E_4071 -- endn_99999 endc_46689 NOTPDB CPL Homeodomain-like--Immunoglobulin-- 47323_46589_ 47323_46589_ B_88 E_25 4_3_1 113 A_100 B_688 E_246 --A_16 B_318 E_97 -- endn_52374_99999 endc INPDB CPL Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases--tRNA-binding arm-- 51045_52540_ 51045_52540_ B_1 E_3 4_2_2 4 B_5 E_413 --A_2129 B_14320 E_12913 -- endn_99999 52540_99999 NOTPDB CPL WW domain--P-loop containing nucleotide triphosphate hydrolases-- 82693_82714_ 82693_82714_ B_13 E_1 6_2_4 14 A_3 B_362 E_31 --B_354 E_19 -- 99999_82693 82866_82714_endc_82693 NOTPDB CPL Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains--Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains-- 52242_56507_ 52242_56507_ B_41 E_13 4_2_2 54 A_62 B_169 E_35 --B_58 E_13 -- 47644_99999 endc_99999 INPDB CPL Cobalamin (vitamin B12)-binding domain--Methionine synthase activation domain-like-- 51126_52540_ 51126_52540_ B_3 E_1 4_2_2 4 A_116 B_481 E_444 --A_2129 B_14320 E_12913 -- 51126_endn 50447_endc NOTPDB CPL Pectin lyase-like--P-loop containing nucleotide triphosphate hydrolases-- 55315_75217_ 55315_75217_ B_182 E_18 4_2_2 200 A_69 B_239 E_475 --A_43 B_424 E_72 -- endn_99999 endc_99999 INPDB CPL L30e-like--alpha/beta knot-- 53474_48452_ 53474_48452_ B_2 E_1 4_2_2 3 A_141 B_2949 E_2909 --A_146 B_1937 E_3442 -- endn_99999 endc_99999 NOTPDB CPL alpha/beta-Hydrolases--TPR-like-- 50998_50993_ 50998_50993_ B_2 E_1 4_2_2 3 A_73 B_392 E_284 --A_3 B_71 E_74 -- endn_99999 endc_99999 NOTPDB CPL Quinoprotein alcohol dehydrogenase-like--Prolyl oligopeptidase, N-terminal domain-- 50978_82171_ 50978_82171_ B_1 E_5 3_2_1 6 A_7 B_101 E_3576 --A_11 B_35 E_129 -- endn_99999 endc NOTPDB CPL WD40-repeat--Dipeptidyl peptidase IV/CD26, N-terminal domain-- 51344_46604_ 51344_46604_ B_50 E_12 3_2_1 62 A_1 B_95 E_19 --B_51 E_12 -- endn_99999 endc INPDB CPL Epsilon subunit of F1F0-ATP synthase N-terminal domain--Epsilon subunit of F1F0-ATP synthase C-terminal domain-- 51206_51206_ 51206_51206_ B_3 E_86 11_6_5 89 A_2 B_447 E_467 --A_2 B_447 E_467 -- 56281_51206_47954_endn_46955_99999 51206_53822_endc_56112_99999 INPDB RPT cAMP-binding domain-like--cAMP-binding domain-like-- 52317_56322_ 52317_56322_ B_4 E_3 3_2_1 7 A_204 B_1244 E_262 --A_20 B_219 E_28 -- endn_99999 endc NOTPDB CPL Class I glutamine amidotransferase-like--ADC synthase-- 82185_82185_ 82185_82185_ B_20 E_28 9_4_5 48 B_91 E_127 --B_91 E_127 -- 82185_endn_50729_99999 81901_82185_52129_endc_99999 NOTPDB RPT Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain--Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain-- 56112_81606_ 56112_81606_ B_3 E_2 4_2_2 5 A_114 B_971 E_9319 --A_2 B_180 E_410 -- endn_99999 endc_99999 NOTPDB CPL Protein kinase-like (PK-like)--Protein serine/threonine phosphatase 2C, catalytic domain-- 50978_69304_ 50978_69304_ B_2 E_6 5_2_3 8 A_7 B_101 E_3576 --A_4 B_18 E_43 -- endn_99999 48452_endc_99999 NOTPDB CPL WD40-repeat--Tricorn protease N-terminal domain-- 46934_54713_ 46934_54713_ B_51 E_3 5_2_3 54 A_21 B_114 E_420 --B_103 E_32 -- endn_99999 54713_endc_99999 INPDB CPL UBA-like--Elongation factor Ts (EF-Ts), dimerisation domain-- 47336_47336_ 47336_47336_ B_5 E_1 8_3_5 6 A_4 B_486 E_88 --A_4 B_486 E_88 -- endn_51735_99999 53474_52777_47336_endc_99999 NOTPDB RPT ACP-like--ACP-like-- 52172_47384_ 52172_47384_ B_37 E_1 5_3_2 38 A_85 B_3166 E_241 --A_45 B_1750 E_74 -- endn_99999_55874 99999_55874 NOTPDB CPL CheY-like--Homodimeric domain of signal transducing histidine kinase-- 53271_52540_ 53271_52540_ B_1 E_2 4_2_2 3 A_132 B_838 E_254 --A_2129 B_14320 E_12913 -- endn_99999 endc_99999 NOTPDB CPL PRTase-like--P-loop containing nucleotide triphosphate hydrolases-- 81767_52540_ 81767_52540_ B_113 E_5 5_2_3 118 B_114 E_8 --A_2129 B_14320 E_12913 -- 52540_99999 81886_endc_99999 INPDB CPL Pre-protein croslinking domain of SecA--P-loop containing nucleotide triphosphate hydrolases-- 53383_47413_ 53383_47413_ B_1 E_1 3_1_2 2 A_367 B_2974 E_1139 --A_123 B_1973 E_199 -- endn 46689_99999 NOTPDB CPL PLP-dependent transferases--lambda repressor-like DNA-binding domains-- 52540_82653_ 52540_82653_ B_4 E_4 5_4_1 8 A_2129 B_14320 E_12913 --B_5 E_5 -- 52540_53795_endn_99999 endc INPDB CPL P-loop containing nucleotide triphosphate hydrolases--Probable GTPase Der, C-terminal domain-- 51905_52540_ 51905_52540_ B_1 E_7 5_2_3 8 A_358 B_2910 E_1243 --A_2129 B_14320 E_12913 -- endn_99999 56059_endc_99999 NOTPDB CPL FAD/NAD(P)-binding domain--P-loop containing nucleotide triphosphate hydrolases-- 81442_46626_ 81442_46626_ B_1 E_2 4_2_2 3 A_20 B_160 E_20 --A_40 B_894 E_220 -- endn_99999 endc_99999 NOTPDB CPL Cytochrome c oxidase subunit I-like--Cytochrome c-- 54791_52540_ 54791_52540_ B_34 E_3 4_2_2 37 A_38 B_130 E_562 --A_2129 B_14320 E_12913 -- endn_99999 52540_endc NOTPDB CPL Eukaryotic type KH-domain (eKH-domain)--P-loop containing nucleotide triphosphate hydrolases-- 81324_51206_ 81324_51206_ B_3 E_205 9_5_4 208 A_34 B_130 E_1059 --A_2 B_447 E_467 -- endn_48256_81324_55347_99999 48403_49367_endc_99999 NOTPDB CPL Voltage-gated potassium channels--cAMP-binding domain-like-- 52283_52283_ 52283_52283_ B_2 E_4 5_2_3 6 A_53 B_465 E_206 --A_53 B_465 E_206 -- 52467_endn 51735_endc_99999 NOTPDB RPT Formate/glycerate dehydrogenase catalytic domain-like--Formate/glycerate dehydrogenase catalytic domain-like-- 53383_53067_ 53383_53067_ B_2 E_2 4_2_2 4 A_367 B_2974 E_1139 --A_176 B_1667 E_1029 -- 53383_endn 56778_99999 NOTPDB CPL PLP-dependent transferases--Actin-like ATPase domain-- 48592_52029_ 48592_52029_ B_5 E_18 5_2_3 23 A_38 B_136 E_258 --A_38 B_142 E_269 -- endn_99999 54849_endc_99999 NOTPDB CPL GroEL equatorial domain-like chaperone equatorial domain--GroEL apical domain-like-- 50969_51004_ 50969_51004_ B_2 E_7 5_3_2 9 A_24 B_218 E_336 --A_2 B_13 E_266 -- endn_63825_99999 endc_99999 NOTPDB CPL YVTN repeat-like/Quinoprotein amine dehydrogenase--C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase-- 53649_53649_ 53649_53649_ B_3 E_1 5_3_2 4 A_60 B_683 E_430 --A_60 B_683 E_430 -- endn_49384_99999 endc_99999 NOTPDB RPT Alkaline phosphatase-like--Alkaline phosphatase-like-- 47226_47226_ 47226_47226_ B_8 E_1 6_3_3 9 A_9 B_246 E_33 --A_9 B_246 E_33 -- endn_52172_99999 47226_endc_99999 NOTPDB RPT Histidine-containing phosphotransfer domain, HPT domain--Histidine-containing phosphotransfer domain, HPT domain-- 54373_51905_ 54373_51905_ B_3 E_1 5_3_2 4 A_16 B_381 E_311 --A_358 B_2910 E_1243 -- endn_51905_51971 endc_99999 NOTPDB CPL FAD-linked reductases, C-terminal domain--FAD/NAD(P)-binding domain-- 69349_69349_ 69349_69349_ B_3 E_5 5_2_3 8 B_103 E_31 --B_103 E_31 -- endn_99999 69349_endc_99999 NOTPDB RPT Phage fibre proteins--Phage fibre proteins-- 57756_52540_ 57756_52540_ B_4 E_11 6_3_3 15 A_11 B_19 E_1238 --A_2129 B_14320 E_12913 -- endn_57756_99999 52540_endc_99999 NOTPDB CPL Retrovirus zinc finger-like domains--P-loop containing nucleotide triphosphate hydrolases-- 47781_50249_ 47781_50249_ B_37 E_1 6_4_2 38 A_49 B_595 E_68 --A_390 B_2734 E_1438 -- 52210_53732_53098_99999 endc_99999 NOTPDB CPL RuvA domain 2-like--Nucleic acid-binding proteins-- 49785_49899_ 49785_49899_ B_4 E_34 9_3_6 38 A_10 B_366 E_724 --A_22 B_208 E_1314 -- endn_49785_99999 57196_49785_50939_49899_endc_99999 NOTPDB CPL Galactose-binding domain-like--Concanavalin A-like lectins/glucanases-- 48452_46565_ 48452_46565_ B_1 E_31 7_4_3 32 A_146 B_1937 E_3442 --A_12 B_326 E_827 -- 56371_endn_48452_99999 48452_endc_99999 NOTPDB CPL TPR-like--Chaperone J-domain-- 55961_55961_ 55961_55961_ B_3 E_13 3_2_1 16 A_9 B_245 E_370 --A_9 B_245 E_370 -- endn_99999 endc NOTPDB RPT Bet v1-like--Bet v1-like-- 48452_54236_ 48452_54236_ B_1 E_1 4_2_2 2 A_146 B_1937 E_3442 --A_18 B_81 E_1815 -- endn_99999 52047_99999 NOTPDB CPL TPR-like--Ubiquitin-like-- 55785_46894_ 55785_46894_ B_17 E_1 7_5_2 18 A_168 B_1284 E_394 --A_87 B_1032 E_48 -- endn_56655_55781_99999_55785 endc_53850 NOTPDB CPL PYP-like sensor domain (PAS domain)--C-terminal effector domain of the bipartite response regulators-- 53335_53067_ 53335_53067_ B_3 E_1 3_1_2 4 A_733 B_3918 E_2070 --A_176 B_1667 E_1029 -- endn 53067_endc NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--Actin-like ATPase domain-- 52540_53254_ 52540_53254_ B_1 E_59 5_2_3 60 A_2129 B_14320 E_12913 --A_18 B_402 E_440 -- endn_99999 52540_endc_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--Phosphoglycerate mutase-like-- 55973_55973_ 55973_55973_ B_93 E_58 5_3_2 151 A_2 B_100 E_69 --A_2 B_100 E_69 -- endn_55973_99999 55973_endc INPDB RPT S-adenosylmethionine synthetase--S-adenosylmethionine synthetase-- 82771_46689_ 82771_46689_ B_1 E_1 3_1_2 2 A_10 B_178 E_75 --A_246 B_4125 E_4002 -- endn endc_99999 NOTPDB CPL GIY-YIG endonuclease--Homeodomain-like-- 46785_53448_ 46785_53448_ B_3 E_1 5_2_3 4 A_1241 B_7979 E_2143 --A_346 B_1868 E_1125 -- 51206_endn 51161_endc_56112 NOTPDB CPL "Winged helix" DNA-binding domain--Nucleotide-diphospho-sugar transferases-- 57850_63393_ 57850_63393_ B_2 E_2 4_2_2 4 A_19 B_52 E_3605 --A_121 B_137 E_69 -- 54975_99999 55821_99999 NOTPDB CPL RING finger domain, C3HC4--RBP12 subunit of RNA polymerase II-- 57850_52540_ 57850_52540_ B_9 E_16 9_4_5 25 A_19 B_52 E_3605 --A_2129 B_14320 E_12913 -- 47266_52540_endn_99999 52540_56436_53795_endc_99999 NOTPDB CPL RING finger domain, C3HC4--P-loop containing nucleotide triphosphate hydrolases-- 48371_52047_ 48371_52047_ B_1 E_1 3_1_2 2 A_73 B_255 E_3951 --A_9 B_93 E_2576 -- endn 48403_50156 NOTPDB CPL ARM repeat--RNI-like-- 48264_48264_ 48264_48264_ B_1 E_14 6_2_4 15 A_9 B_219 E_1721 --A_9 B_219 E_1721 -- endn_99999 48264_endc_53098_99999 NOTPDB RPT Cytochrome P450--Cytochrome P450-- 51695_51412_ 51695_51412_ B_12 E_2 3_2_1 14 A_5 B_143 E_312 --A_45 B_354 E_83 -- endn_99999 endc NOTPDB CPL Phosphatidylinositol-specific phospholipase C (PI-PLC)--Inosine monophosphate dehydrogenase (IMPDH)-- 49611_53098_ 49611_53098_ B_1 E_18 6_3_3 19 A_18 B_143 E_192 --A_290 B_2494 E_2335 -- endn_57756_99999 56672_endc_99999 NOTPDB CPL Viral coat and capsid proteins--Ribonuclease H-like-- 53254_50156_ 53254_50156_ B_1 E_1 3_1_2 2 A_18 B_402 E_440 --A_28 B_534 E_1380 -- endn 52096_endc NOTPDB CPL Phosphoglycerate mutase-like--PDZ domain-like-- 46785_53383_ 46785_53383_ B_180 E_6 6_3_3 186 A_1241 B_7979 E_2143 --A_367 B_2974 E_1139 -- 54427_endn_99999 53383_endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--PLP-dependent transferases-- 48300_54736_ 48300_54736_ B_97 E_26 3_2_1 123 B_97 E_31 --B_173 E_55 -- endn_99999 endc INPDB CPL Ribosomal protein L7/12, oligomerisation (N-terminal) domain--ClpS-like-- 75420_74942_ 75420_74942_ B_75 E_1 4_2_2 76 A_1 B_82 E_7 --A_2 B_84 E_1 -- 46626_endn endc_99999 INPDB CPL YhbC-like, N-terminal domain--YhbC-like, C-terminal domain-- 47413_46689_ 47413_46689_ B_5 E_107 7_5_2 112 A_123 B_1973 E_199 --A_246 B_4125 E_4002 -- 53383_endn_52172_48350_99999 endc_99999 INPDB CPL lambda repressor-like DNA-binding domains--Homeodomain-like-- 49785_50370_ 49785_50370_ B_2 E_3 6_4_2 5 A_10 B_366 E_724 --B_67 E_219 -- endn_48208_51011_99999 49785_endc NOTPDB CPL Galactose-binding domain-like--Ricin B-like lectins-- 46689_47060_ 46689_47060_ B_2 E_11 4_2_2 13 A_246 B_4125 E_4002 --A_18 B_103 E_93 -- endn_46689 46894_endc NOTPDB CPL Homeodomain-like--S15/NS1 RNA-binding domain-- 52540_50249_ 52540_50249_ B_2 E_9 6_2_4 11 A_2129 B_14320 E_12913 --A_390 B_2734 E_1438 -- endn_99999 50249_52317_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Nucleic acid-binding proteins-- 56784_56112_ 56784_56112_ B_1 E_6 3_1_2 7 A_230 B_1745 E_1267 --A_114 B_971 E_9319 -- endn endc_99999 NOTPDB CPL HAD-like--Protein kinase-like (PK-like)-- 53633_55729_ 53633_55729_ B_23 E_8 3_2_1 31 A_84 B_449 E_69 --A_217 B_2438 E_800 -- endn_99999 endc NOTPDB CPL Carbamate kinase-like--Acyl-CoA N-acyltransferases (Nat)-- 50965_81296_ 50965_81296_ B_4 E_11 6_3_3 15 A_4 B_35 E_898 --A_40 B_404 E_1207 -- endn_49785_99999 50965_endc_99999 INPDB CPL Galactose oxidase, central domain--E set domains-- 56112_52402_ 56112_52402_ B_2 E_1 3_2_1 3 A_114 B_971 E_9319 --A_350 B_1402 E_436 -- endn_99999 endc NOTPDB CPL Protein kinase-like (PK-like)--Adenine nucleotide alpha hydrolases-like-- 52540_53098_ 52540_53098_ B_1 E_1 3_2_1 2 A_2129 B_14320 E_12913 --A_290 B_2494 E_2335 -- endn_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Ribonuclease H-like-- 50494_50494_ 50494_50494_ B_3 E_72 9_5_4 75 A_19 B_482 E_1600 --A_19 B_482 E_1600 -- endn_57667_55676_50494_99999 50494_50156_endc_99999 NOTPDB RPT Trypsin-like serine proteases--Trypsin-like serine proteases-- 55729_53383_ 55729_53383_ B_3 E_1 3_2_1 4 A_217 B_2438 E_800 --A_367 B_2974 E_1139 -- endn_99999 endc NOTPDB CPL Acyl-CoA N-acyltransferases (Nat)--PLP-dependent transferases-- 81383_52047_ 81383_52047_ B_2 E_362 20_7_13 364 B_8 E_2068 --A_9 B_93 E_2576 -- 81383_endn_52058_56672_52317_48452_99999 57095_48371_endc_55681_52047_51569_55200_75471_52058_52075_63965_99999_46609 INPDB CPL F-box domain--RNI-like-- 69360_69360_ 69360_69360_ B_20 E_1 8_4_4 21 B_34 E_3 --B_34 E_3 -- endn_51445_69360_99999 endc_53187_99999_69360 NOTPDB RPT Choline binding domain of autolysin C-LytA--Choline binding domain of autolysin C-LytA-- 49354_49584_ 49354_49584_ B_71 E_3 5_3_2 74 A_2 B_95 E_314 --A_1 B_74 E_7 -- endn_49401_99999 63418_endc INPDB CPL PapD-like--Periplasmic chaperone C-domain-- 51569_53223_ 51569_53223_ B_5 E_9 6_3_3 14 A_136 B_1089 E_356 --A_61 B_487 E_172 -- 52540_endn_99999 52540_endc_51735 NOTPDB CPL Aldolase--Aminoacid dehydrogenase-like, N-terminal domain-- 63520_63520_ 63520_63520_ B_83 E_1 10_5_5 84 B_147 E_5 --B_147 E_5 -- 52540_endn_50151_46785_99999 52218_55804_52794_endc_99999 INPDB RPT PTS-regulatory domain, PRD--PTS-regulatory domain, PRD-- 51230_56954_ 51230_56954_ B_138 E_6 15_5_10 144 A_35 B_1330 E_195 --B_451 E_40 -- 52540_51230_endn_51905_99999 52540_63600_50156_48695_endc_50998_51261_49373_51445_82693 NOTPDB CPL Single hybrid motif--Integral outer membrane protein TolC, efflux pump component-- 54292_53706_ 54292_53706_ B_6 E_2 6_3_3 8 A_44 B_565 E_187 --A_63 B_328 E_38 -- endn_99999_54862 endc_54862_50692 NOTPDB CPL 2Fe-2S ferredoxin-like--Formate dehydrogenase/DMSO reductase, domains 1-3-- 55073_52540_ 55073_52540_ B_20 E_2 9_5_4 22 A_5 B_639 E_400 --A_2129 B_14320 E_12913 -- endn_47769_57829_48452_99999 52540_48452_endc_99999 NOTPDB CPL Adenylyl and guanylyl cyclase catalytic domain--P-loop containing nucleotide triphosphate hydrolases-- 49401_49401_ 49401_49401_ B_21 E_3 5_3_2 24 A_2 B_220 E_29 --A_2 B_220 E_29 -- endn_49401_99999 endc_49401 INPDB RPT Bacterial adhesins--Bacterial adhesins-- 53474_51126_ 53474_51126_ B_5 E_1 4_3_1 6 A_141 B_2949 E_2909 --A_116 B_481 E_444 -- endn_99999_53850 endc NOTPDB CPL alpha/beta-Hydrolases--Pectin lyase-like-- 48439_54928_ 48439_54928_ B_1 E_1 3_2_1 2 A_48 B_249 E_670 --A_6 B_60 E_3471 -- endn_48452 endc NOTPDB CPL Protein prenylyltransferase--RNA-binding domain, RBD-- 53335_53756_ 53335_53756_ B_5 E_1 5_2_3 6 A_733 B_3918 E_2070 --A_262 B_1575 E_1122 -- endn_47986 53335_53756_endc NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--UDP-Glycosyltransferase/glycogen phosphorylase-- 50341_52172_ 50341_52172_ B_73 E_2 6_4_2 75 A_19 B_255 E_17 --A_85 B_3166 E_241 -- endn_50341_99999_55874 52172_endc NOTPDB CPL CheW-like--CheY-like-- 49303_74650_ 49303_74650_ B_25 E_3 5_2_3 28 A_2 B_88 E_38 --A_8 B_214 E_72 -- 49899_51445 49303_endc_99999 INPDB CPL beta-Galactosidase/glucuronidase domain--Galactose mutarotase-like-- 52200_52540_ 52200_52540_ B_5 E_107 11_3_8 112 A_2 B_41 E_302 --A_2129 B_14320 E_12913 -- endn_52200_99999 52540_52047_52058_48452_52980_endc_52200_99999 NOTPDB CPL Toll/Interleukin receptor TIR domain--P-loop containing nucleotide triphosphate hydrolases-- 51735_55021_ 51735_55021_ B_15 E_1 3_2_1 16 A_993 B_8798 E_3827 --A_109 B_662 E_147 -- endn_52283 endc NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Regulatory domain in the aminoacid metabolism-- 51445_50405_ 51445_50405_ B_1 E_1 4_2_2 2 A_89 B_1646 E_1474 --A_2 B_20 E_82 -- 50405_99999 endc_51445 NOTPDB CPL (Trans)glycosidases--Actin-crosslinking proteins-- 53955_56112_ 53955_56112_ B_1 E_1 3_1_2 2 A_9 B_652 E_194 --A_114 B_971 E_9319 -- endn 55073_99999 NOTPDB CPL Lysozyme-like--Protein kinase-like (PK-like)-- 51230_51261_ 51230_51261_ B_8 E_1 5_3_2 9 A_35 B_1330 E_195 --A_11 B_271 E_40 -- 51230_endn_99999 endc_99999 NOTPDB CPL Single hybrid motif--Duplicated hybrid motif-- 53474_46626_ 53474_46626_ B_1 E_1 3_1_2 2 A_141 B_2949 E_2909 --A_40 B_894 E_220 -- endn endc_99999 NOTPDB CPL alpha/beta-Hydrolases--Cytochrome c-- 53822_53822_ 53822_53822_ B_4 E_2 4_2_2 6 A_49 B_1285 E_794 --A_49 B_1285 E_794 -- endn_99999 endc_99999 NOTPDB RPT Periplasmic binding protein-like I--Periplasmic binding protein-like I-- 51182_51182_ 51182_51182_ B_21 E_11 7_3_4 32 A_107 B_1063 E_385 --A_107 B_1063 E_385 -- endn_51182_99999 51182_endc_53098_46689 NOTPDB RPT RmlC-like cupins--RmlC-like cupins-- 82282_51717_ 82282_51717_ B_47 E_14 5_1_4 61 B_91 E_62 --A_77 B_207 E_36 -- endn 52242_endc_47644_99999 NOTPDB CPL Betaine-homocysteine S-methyltransferase--Dihydropteroate synthetase-like-- 69318_69318_ 69318_69318_ B_9 E_2 6_3_3 11 A_6 B_79 E_181 --A_6 B_79 E_181 -- endn_48452_99999 69318_endc_99999 NOTPDB RPT Integrin alpha N-terminal domain--Integrin alpha N-terminal domain-- 55083_51717_ 55083_51717_ B_5 E_5 4_3_1 10 B_106 E_9 --A_77 B_207 E_36 -- endn_55620_99999 endc NOTPDB CPL 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK--Dihydropteroate synthetase-like-- 49785_50965_ 49785_50965_ B_1 E_10 5_3_2 11 A_10 B_366 E_724 --A_4 B_35 E_898 -- endn_53474_99999 81296_99999 INPDB CPL Galactose-binding domain-like--Galactose oxidase, central domain-- 48452_81901_ 48452_81901_ B_5 E_4 5_2_3 9 A_146 B_1937 E_3442 --B_153 E_123 -- endn_99999 48452_endc_99999 NOTPDB CPL TPR-like--Cysteine rich protein B (HcpB)-- 56112_50978_ 56112_50978_ B_5 E_17 6_2_4 22 A_114 B_971 E_9319 --A_7 B_101 E_3576 -- endn_99999 52540_50969_endc_99999 NOTPDB CPL Protein kinase-like (PK-like)--WD40-repeat-- 50156_52540_ 50156_52540_ B_1 E_14 6_2_4 15 A_28 B_534 E_1380 --A_2129 B_14320 E_12913 -- endn_99999 53795_51045_endc_99999 NOTPDB CPL PDZ domain-like--P-loop containing nucleotide triphosphate hydrolases-- A 41 53807_56655_ 53807_56655_ A_2 3_1_2 2 A_104 B_499 E_42 --A_26 B_281 E_133 -- endn endc_99999 NOTPDB CPL "Helical backbone" metal receptor--Sugar phosphatases-- 46548_54862_ 46548_54862_ A_8 6_3_3 8 A_125 B_477 E_67 --A_411 B_743 E_103 -- endn_99999_54862 endc_54862_99999 NOTPDB CPL alpha-helical ferredoxin--4Fe-4S ferredoxins-- 51905_56731_ 51905_56731_ A_2 3_1_2 2 A_358 B_2910 E_1243 --A_33 B_179 E_8 -- endn endc_99999 NOTPDB CPL FAD/NAD(P)-binding domain--DNA primase DnaG catalytic core-- 50960_49299_ 50960_49299_ A_4 4_2_2 4 A_34 B_192 E_75 --A_103 B_31 E_55 -- endn_49299 49299_endc NOTPDB CPL TolB, C-terminal domain--PKD domain-- 51126_49299_ 51126_49299_ A_23 8_3_5 23 A_116 B_481 E_444 --A_103 B_31 E_55 -- 51126_endn_47473 50960_49299_50974_50998_99999 NOTPDB CPL Pectin lyase-like--PKD domain-- 50249_55729_ 50249_55729_ A_2 3_1_2 2 A_390 B_2734 E_1438 --A_217 B_2438 E_800 -- endn endc_99999 NOTPDB CPL Nucleic acid-binding proteins--Acyl-CoA N-acyltransferases (Nat)-- 49299_69318_ 49299_69318_ A_2 4_2_2 2 A_103 B_31 E_55 --A_6 B_79 E_181 -- 49299_99999 49299_99999 NOTPDB CPL PKD domain--Integrin alpha N-terminal domain-- 55608_47413_ 55608_47413_ A_2 4_2_2 2 A_42 B_71 E_32 --A_123 B_1973 E_199 -- 51294_55608 52540_99999 NOTPDB CPL Homing endonucleases--lambda repressor-like DNA-binding domains-- 54791_56281_ 54791_56281_ A_4 4_2_2 4 A_38 B_130 E_562 --A_273 B_950 E_318 -- 54791_99999 99999_56112 NOTPDB CPL Eukaryotic type KH-domain (eKH-domain)--Metallo-hydrolase/oxidoreductase-- 48310_52540_ 48310_52540_ A_3 3_2_1 3 A_40 B_8 E_3 --A_2129 B_14320 E_12913 -- 52540_99999 endc NOTPDB CPL Aldehyde ferredoxin oxidoreductase, C-terminal domains--P-loop containing nucleotide triphosphate hydrolases-- 50974_49299_ 50974_49299_ A_6 6_3_3 6 A_28 B_71 E_18 --A_103 B_31 E_55 -- endn_49299_99999 46626_endc_50974 INPDB CPL Nitrous oxide reductase, N-terminal domain--PKD domain-- 57716_46785_ 57716_46785_ A_6 3_2_1 6 A_72 B_426 E_2067 --A_1241 B_7979 E_2143 -- endn_46785 endc NOTPDB CPL Glucocorticoid receptor-like (DNA-binding domain)--"Winged helix" DNA-binding domain-- 75604_52402_ 75604_52402_ A_6 5_2_3 6 A_72 B_25 E_70 --A_350 B_1402 E_436 -- endn_54862 52833_endc_99999 NOTPDB CPL Archaeosine tRNA-guanine transglycosylase, C-terminal additional domains--Adenine nucleotide alpha hydrolases-like-- 51658_55729_ 51658_55729_ A_3 3_2_1 3 A_102 B_575 E_65 --A_217 B_2438 E_800 -- 47917_99999 endc NOTPDB CPL Xylose isomerase-like--Acyl-CoA N-acyltransferases (Nat)-- 53335_57850_ 53335_57850_ A_3 3_1_2 3 A_733 B_3918 E_2070 --A_19 B_52 E_3605 -- endn endc_99999 NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--RING finger domain, C3HC4-- 52242_46626_ 52242_46626_ A_2 3_2_1 2 A_62 B_169 E_35 --A_40 B_894 E_220 -- endn_99999 endc NOTPDB CPL Cobalamin (vitamin B12)-binding domain--Cytochrome c-- 51690_51569_ 51690_51569_ A_2 3_1_2 2 A_30 B_124 E_12 --A_136 B_1089 E_356 -- endn 50447_99999 NOTPDB CPL Quinolinic acid phosphoribosyltransferase, C-terminal domain--Aldolase-- 57802_55729_ 57802_55729_ A_4 4_2_2 4 A_77 B_171 E_177 --A_217 B_2438 E_800 -- 50249_99999 53920_99999 NOTPDB CPL Rubredoxin-like--Acyl-CoA N-acyltransferases (Nat)-- 51055_49299_ 51055_49299_ A_3 3_1_2 3 A_4 B_66 E_8 --A_103 B_31 E_55 -- endn 51445_99999 NOTPDB CPL Carbohydrate binding domain--PKD domain-- 49299_50960_ 49299_50960_ A_3 4_2_2 3 A_103 B_31 E_55 --A_34 B_192 E_75 -- 51126_49299 49299_99999 NOTPDB CPL PKD domain--TolB, C-terminal domain-- 50249_54791_ 50249_54791_ A_9 4_2_2 9 A_390 B_2734 E_1438 --A_38 B_130 E_562 -- endn_99999 endc_99999 NOTPDB CPL Nucleic acid-binding proteins--Eukaryotic type KH-domain (eKH-domain)-- 53335_56059_ 53335_56059_ A_2 3_2_1 2 A_733 B_3918 E_2070 --A_192 B_1104 E_490 -- endn_99999 endc NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--Glutathione synthetase ATP-binding domain-like-- 51366_51717_ 51366_51717_ A_3 4_2_2 3 A_289 B_986 E_160 --A_77 B_207 E_36 -- 99999_53098 endc_99999 NOTPDB CPL Ribulose-phoshate binding barrel--Dihydropteroate synthetase-like-- 49299_49373_ 49299_49373_ A_2 4_2_2 2 A_103 B_31 E_55 --A_20 B_171 E_29 -- endn_50998 endc_99999 NOTPDB CPL PKD domain--Invasin/intimin cell-adhesion fragments-- 53067_56112_ 53067_56112_ A_8 3_2_1 8 A_176 B_1667 E_1029 --A_114 B_971 E_9319 -- endn_99999 endc NOTPDB CPL Actin-like ATPase domain--Protein kinase-like (PK-like)-- 54862_53067_ 54862_53067_ A_7 5_3_2 7 A_411 B_743 E_103 --A_176 B_1667 E_1029 -- 51366_endn_99999 endc_99999 NOTPDB CPL 4Fe-4S ferredoxins--Actin-like ATPase domain-- 54862_75604_ 54862_75604_ A_5 3_1_2 5 A_411 B_743 E_103 --A_72 B_25 E_70 -- endn 52402_99999 NOTPDB CPL 4Fe-4S ferredoxins--Archaeosine tRNA-guanine transglycosylase, C-terminal additional domains-- 82171_49299_ 82171_49299_ A_3 4_2_2 3 A_11 B_35 E_129 --A_103 B_31 E_55 -- 50960_endn 49299_99999 NOTPDB CPL Dipeptidyl peptidase IV/CD26, N-terminal domain--PKD domain-- 49309_81296_ 49309_81296_ A_2 4_2_2 2 A_22 B_24 E_79 --A_40 B_404 E_1207 -- endn_99999 55961_99999 NOTPDB CPL Transglutaminase, two C-terminal domains--E set domains-- 52980_47413_ 52980_47413_ A_5 3_1_2 5 A_117 B_308 E_46 --A_123 B_1973 E_199 -- endn 52980_99999 NOTPDB CPL Restriction endonuclease-like--lambda repressor-like DNA-binding domains-- 57716_55681_ 57716_55681_ A_4 3_1_2 4 A_72 B_426 E_2067 --A_205 B_1250 E_450 -- endn 48371_99999 NOTPDB CPL Glucocorticoid receptor-like (DNA-binding domain)--Class II aaRS and biotin synthetases-- 49299_50974_ 49299_50974_ A_5 5_3_2 5 A_103 B_31 E_55 --A_28 B_71 E_18 -- 51126_49299_50974 49299_endc NOTPDB CPL PKD domain--Nitrous oxide reductase, N-terminal domain-- 63393_63393_ 63393_63393_ A_5 4_2_2 5 A_121 B_137 E_69 --A_121 B_137 E_69 -- 46894_99999 endc_99999 NOTPDB RPT RBP12 subunit of RNA polymerase II--RBP12 subunit of RNA polymerase II-- 46894_63393_ 46894_63393_ A_6 4_2_2 6 A_87 B_1032 E_48 --A_121 B_137 E_69 -- endn_99999 63393_endc NOTPDB CPL C-terminal effector domain of the bipartite response regulators--RBP12 subunit of RNA polymerase II-- 54236_53335_ 54236_53335_ A_3 3_2_1 3 A_18 B_81 E_1815 --A_733 B_3918 E_2070 -- 46785_99999 endc NOTPDB CPL Ubiquitin-like--S-adenosyl-L-methionine-dependent methyltransferases-- 47240_54862_ 47240_54862_ A_2 3_1_2 2 A_126 B_660 E_337 --A_411 B_743 E_103 -- endn 47240_99999 NOTPDB CPL Ferritin-like--4Fe-4S ferredoxins-- 51735_75500_ 51735_75500_ A_5 4_2_2 5 A_993 B_8798 E_3827 --A_8 B_39 E_1 -- endn_81324 endc_75500 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Putative transcriptional regulator TM1602, C-terminal domain-- 46579_53807_ 46579_53807_ A_2 3_2_1 2 A_61 B_31 E_251 --A_104 B_499 E_42 -- endn_99999 endc NOTPDB CPL Prefoldin--"Helical backbone" metal receptor-- 54814_56281_ 54814_56281_ A_10 4_2_2 10 A_82 B_390 E_98 --A_273 B_950 E_318 -- 54814_99999 47874_99999 NOTPDB CPL Prokaryotic type KH domain (pKH-domain)--Metallo-hydrolase/oxidoreductase-- 47473_51126_ 47473_51126_ A_8 3_1_2 8 A_51 B_190 E_2808 --A_116 B_481 E_444 -- endn 49299_99999 NOTPDB CPL EF-hand--Pectin lyase-like-- 50998_47473_ 50998_47473_ A_3 3_1_2 3 A_73 B_392 E_284 --A_51 B_190 E_2808 -- endn 49319_99999 NOTPDB CPL Quinoprotein alcohol dehydrogenase-like--EF-hand-- B 316 51126_49785_ 51126_49785_ B_3 3_2_1 3 A_116 B_481 E_444 --A_10 B_366 E_724 -- endn_99999 endc NOTPDB CPL Pectin lyase-like--Galactose-binding domain-like-- 46785_47406_ 46785_47406_ B_4 3_1_2 4 A_1241 B_7979 E_2143 --B_16 E_10 -- endn endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--SinR repressor dimerisation domain-like-- 52172_75445_ 52172_75445_ B_17 3_2_1 17 A_85 B_3166 E_241 --A_18 B_89 E_28 -- endn_99999 endc NOTPDB CPL CheY-like--D-ribose-5-phosphate isomerase (RpiA), lid domain-- 48208_63446_ 48208_63446_ B_3 4_3_1 3 A_67 B_360 E_274 --A_9 B_38 E_1 -- endn_81296_99999 endc NOTPDB CPL Six-hairpin glycosyltransferases--Type I dockerin domain-- 55486_63446_ 55486_63446_ B_2 4_2_2 2 A_64 B_735 E_1617 --A_9 B_38 E_1 -- endn_99999 47473_99999 NOTPDB CPL Metalloproteases ("zincins"), catalytic domain--Type I dockerin domain-- 55781_46894_ 55781_46894_ B_11 4_2_2 11 A_54 B_1030 E_131 --A_87 B_1032 E_48 -- endn_99999 endc_99999 NOTPDB CPL GAF domain-like--C-terminal effector domain of the bipartite response regulators-- 51730_53720_ 51730_53720_ B_37 4_2_2 37 A_11 B_130 E_62 --A_55 B_835 E_336 -- 81935_99999 endc_99999 NOTPDB CPL FAD-linked oxidoreductase--ALDH-like-- 50952_48371_ 50952_48371_ B_2 4_2_2 2 A_7 B_167 E_70 --A_73 B_255 E_3951 -- endn_99999 46626_48431 NOTPDB CPL Soluble quinoprotein glucose dehydrogenase--ARM repeat-- 47781_46929_ 47781_46929_ B_91 3_2_1 91 A_49 B_595 E_68 --A_4 B_93 E_19 -- 50249_endn endc INPDB CPL RuvA domain 2-like--DNA helicase RuvA subunit, C-terminal domain-- 50151_63520_ 50151_63520_ B_36 3_1_2 36 A_1 B_36 --B_147 E_5 -- endn endc_63520 NOTPDB CPL SacY-like RNA-binding domain--PTS-regulatory domain, PRD-- 54862_51971_ 54862_51971_ B_6 4_2_2 6 A_411 B_743 E_103 --A_47 B_404 E_155 -- endn_54862 51735_51971 NOTPDB CPL 4Fe-4S ferredoxins--Nucleotide-binding domain-- 47781_51366_ 47781_51366_ B_11 3_2_1 11 A_49 B_595 E_68 --A_289 B_986 E_160 -- endn_99999 endc NOTPDB CPL RuvA domain 2-like--Ribulose-phoshate binding barrel-- 46689_52512_ 46689_52512_ B_21 4_1_3 21 A_246 B_4125 E_4002 --A_33 B_474 E_94 -- endn 53383_endc_99999 NOTPDB CPL Homeodomain-like--Phosphosugar isomerase-- 54814_82708_ 54814_82708_ B_26 3_2_1 26 A_82 B_390 E_98 --B_37 E_68 -- endn_99999 endc NOTPDB CPL Prokaryotic type KH domain (pKH-domain)--R3H domain-- 48452_55781_ 48452_55781_ B_3 4_2_2 3 A_146 B_1937 E_3442 --A_54 B_1030 E_131 -- endn_99999 99999_55785 NOTPDB CPL TPR-like--GAF domain-like-- 55781_81606_ 55781_81606_ B_20 8_4_4 20 A_54 B_1030 E_131 --A_2 B_180 E_410 -- endn_55781_55785_99999 endc_55785_55874_99999 NOTPDB CPL GAF domain-like--Protein serine/threonine phosphatase 2C, catalytic domain-- 48329_48452_ 48329_48452_ B_8 4_2_2 8 A_9 B_1007 E_45 --A_146 B_1937 E_3442 -- endn_48329 endc_99999 NOTPDB CPL RNA polymerase sigma subunit--TPR-like-- 49899_49785_ 49899_49785_ B_6 5_3_2 6 A_22 B_208 E_1314 --A_10 B_366 E_724 -- endn_49785_99999 49303_endc NOTPDB CPL Concanavalin A-like lectins/glucanases--Galactose-binding domain-like-- 56719_50952_ 56719_50952_ B_2 3_2_1 2 A_12 B_354 E_44 --A_7 B_167 E_70 -- endn_55608 endc NOTPDB CPL Type II DNA topoisomerase--Soluble quinoprotein glucose dehydrogenase-- 55486_46626_ 55486_46626_ B_2 3_2_1 2 A_64 B_735 E_1617 --A_40 B_894 E_220 -- endn_99999 endc NOTPDB CPL Metalloproteases ("zincins"), catalytic domain--Cytochrome c-- 56601_51126_ 56601_51126_ B_6 3_2_1 6 A_15 B_1220 E_127 --A_116 B_481 E_444 -- endn_99999 endc NOTPDB CPL beta-Lactamase/D-ala carboxypeptidase--Pectin lyase-like-- 50341_50341_ 50341_50341_ B_7 7_3_4 7 A_19 B_255 E_17 --A_19 B_255 E_17 -- endn_50341_55874 50341_52172_endc_99999 NOTPDB RPT CheW-like--CheW-like-- 56112_53850_ 56112_53850_ B_2 3_2_1 2 A_114 B_971 E_9319 --A_257 B_5627 E_740 -- endn_99999 endc NOTPDB CPL Protein kinase-like (PK-like)--Periplasmic binding protein-like II-- 50494_69318_ 50494_69318_ B_5 4_2_2 5 A_19 B_482 E_1600 --A_6 B_79 E_181 -- endn_99999 endc_99999 NOTPDB CPL Trypsin-like serine proteases--Integrin alpha N-terminal domain-- 64484_64484_ 64484_64484_ B_4 4_2_2 4 A_67 B_204 E_148 --A_67 B_204 E_148 -- endn_99999 64484_99999 NOTPDB RPT beta and beta-prime subunits of DNA dependent RNA-polymerase--beta and beta-prime subunits of DNA dependent RNA-polymerase-- 48329_54427_ 48329_54427_ B_22 3_2_1 22 A_9 B_1007 E_45 --A_11 B_446 E_248 -- endn_48329 endc NOTPDB CPL RNA polymerase sigma subunit--NTF2-like-- 53335_51338_ 53335_51338_ B_3 4_2_2 3 A_733 B_3918 E_2070 --A_82 B_584 E_154 -- endn_99999 51658_endc NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--Composite domain of metallo-dependent hydrolases-- 57783_63393_ 57783_63393_ B_5 5_3_2 5 A_193 B_620 E_393 --A_121 B_137 E_69 -- endn_56712_54975 55821_99999 NOTPDB CPL Zinc beta-ribbon--RBP12 subunit of RNA polymerase II-- 51998_52540_ 51998_52540_ B_3 3_1_2 3 A_39 B_258 E_33 --A_2129 B_14320 E_12913 -- endn 52540_99999 NOTPDB CPL PFL-like glycyl radical enzymes--P-loop containing nucleotide triphosphate hydrolases-- 51230_53067_ 51230_53067_ B_2 3_2_1 2 A_35 B_1330 E_195 --A_176 B_1667 E_1029 -- 52540_99999 endc NOTPDB CPL Single hybrid motif--Actin-like ATPase domain-- 56601_46626_ 56601_46626_ B_2 3_1_2 2 A_15 B_1220 E_127 --A_40 B_894 E_220 -- endn endc_99999 NOTPDB CPL beta-Lactamase/D-ala carboxypeptidase--Cytochrome c-- 53187_50156_ 53187_50156_ B_2 3_2_1 2 A_105 B_1042 E_648 --A_28 B_534 E_1380 -- 52025_99999 endc NOTPDB CPL Zn-dependent exopeptidases--PDZ domain-like-- 50203_54334_ 50203_54334_ B_27 3_2_1 27 A_24 B_163 E_47 --A_3 B_50 E_36 -- endn_99999 endc INPDB CPL Bacterial enterotoxins--Superantigen toxins, C-terminal domain-- 46785_50249_ 46785_50249_ B_40 5_2_3 40 A_1241 B_7979 E_2143 --A_390 B_2734 E_1438 -- endn_99999 50249_51306_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Nucleic acid-binding proteins-- 52540_47681_ 52540_47681_ B_3 3_2_1 3 A_2129 B_14320 E_12913 --B_4 E_1 -- 52540_47413 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--C-terminal domain of B transposition protein-- 53955_82057_ 53955_82057_ B_11 4_1_3 11 A_9 B_652 E_194 --B_31 E_5 -- endn 82057_endc_99999 NOTPDB CPL Lysozyme-like--GW domain-- 51126_56935_ 51126_56935_ B_2 3_2_1 2 A_116 B_481 E_444 --B_1350 E_155 -- endn_99999 endc NOTPDB CPL Pectin lyase-like--Porins-- 46689_53335_ 46689_53335_ B_3 3_2_1 3 A_246 B_4125 E_4002 --A_733 B_3918 E_2070 -- endn_99999 endc NOTPDB CPL Homeodomain-like--S-adenosyl-L-methionine-dependent methyltransferases-- 48230_74650_ 48230_74650_ B_12 7_5_2 12 A_2 B_34 E_3 --A_8 B_214 E_72 -- endn_49373_81296_49899_99999 99999_49863 INPDB CPL Chondroitin AC/alginate lyase--Galactose mutarotase-like-- 49384_49265_ 49384_49265_ B_3 3_1_2 3 A_6 B_62 E_34 --A_23 B_135 E_1734 -- endn 51445_49265 NOTPDB CPL Carbohydrate-binding domain--Fibronectin type III-- 47413_48452_ 47413_48452_ B_36 4_2_2 36 A_123 B_1973 E_199 --A_146 B_1937 E_3442 -- endn_99999 endc_99999 NOTPDB CPL lambda repressor-like DNA-binding domains--TPR-like-- 52402_52540_ 52402_52540_ B_5 5_3_2 5 A_350 B_1402 E_436 --A_2129 B_14320 E_12913 -- 52540_endn_99999 endc_99999 NOTPDB CPL Adenine nucleotide alpha hydrolases-like--P-loop containing nucleotide triphosphate hydrolases-- 51905_53335_ 51905_53335_ B_3 3_1_2 3 A_358 B_2910 E_1243 --A_733 B_3918 E_2070 -- endn endc_99999 NOTPDB CPL FAD/NAD(P)-binding domain--S-adenosyl-L-methionine-dependent methyltransferases-- 54909_54909_ 54909_54909_ B_13 3_1_2 13 A_113 B_586 E_39 --A_113 B_586 E_39 -- endn endc_99999 NOTPDB RPT Dimeric alpha+beta barrel--Dimeric alpha+beta barrel-- 75005_75005_ 75005_75005_ B_3 3_2_1 3 A_8 B_151 E_21 --A_8 B_151 E_21 -- endn_99999 endc NOTPDB RPT alpha-L-arabinanase--alpha-L-arabinanase-- 52507_51905_ 52507_51905_ B_2 3_1_2 2 A_47 B_152 E_29 --A_358 B_2910 E_1243 -- endn 51735_endc NOTPDB CPL DFP DNA/pantothenate metabolism flavoprotein--FAD/NAD(P)-binding domain-- 57770_52540_ 57770_52540_ B_3 3_1_2 3 A_24 B_62 E_24 --A_2129 B_14320 E_12913 -- endn 53795_99999 NOTPDB CPL Methionyl-tRNA synthetase (MetRS), Zn-domain--P-loop containing nucleotide triphosphate hydrolases-- 52540_55785_ 52540_55785_ B_2 4_2_2 2 A_2129 B_14320 E_12913 --A_168 B_1284 E_394 -- endn_99999 48283_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--PYP-like sensor domain (PAS domain)-- 51905_47699_ 51905_47699_ B_2 3_2_1 2 A_358 B_2910 E_1243 --A_1 B_4 E_283 -- endn_99999 endc NOTPDB CPL FAD/NAD(P)-binding domain--Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-- 52964_48439_ 52964_48439_ B_7 4_3_1 7 A_1 B_66 E_1 --A_48 B_249 E_670 -- endn_46894_55073 endc NOTPDB CPL TolB, N-terminal domain--Protein prenylyltransferase-- 52402_82829_ 52402_82829_ B_63 5_1_4 63 A_350 B_1402 E_436 --B_67 E_2 -- endn 53271_53927_endc_99999 INPDB CPL Adenine nucleotide alpha hydrolases-like--Putative cell cycle protein MesJ, middle and C-terminal domain-- 52935_46894_ 52935_46894_ B_2 3_2_1 2 A_19 B_116 E_66 --A_87 B_1032 E_48 -- endn_99999 endc NOTPDB CPL Pyruvate kinase, C-terminal domain--C-terminal effector domain of the bipartite response regulators-- 55604_51261_ 55604_51261_ B_32 3_2_1 32 B_195 E_5 --A_11 B_271 E_40 -- endn_99999 endc NOTPDB CPL Glucose permease domain IIB--Duplicated hybrid motif-- 51445_54106_ 51445_54106_ B_5 3_1_2 5 A_89 B_1646 E_1474 --B_368 E_99 -- endn 54106_endc NOTPDB CPL (Trans)glycosidases--LysM domain-- 69349_51445_ 69349_51445_ B_2 3_1_2 2 B_103 E_31 --A_89 B_1646 E_1474 -- endn 99999_50370 NOTPDB CPL Phage fibre proteins--(Trans)glycosidases-- 55785_52540_ 55785_52540_ B_79 12_8_4 79 A_168 B_1284 E_394 --A_2129 B_14320 E_12913 -- 53901_55021_endn_54631_55594_55781_99999_55785 48283_endc_46785_46689 NOTPDB CPL PYP-like sensor domain (PAS domain)--P-loop containing nucleotide triphosphate hydrolases-- 52402_51569_ 52402_51569_ B_2 3_2_1 2 A_350 B_1402 E_436 --A_136 B_1089 E_356 -- endn_99999 endc NOTPDB CPL Adenine nucleotide alpha hydrolases-like--Aldolase-- 54423_52833_ 54423_52833_ B_28 4_2_2 28 B_29 E_2 --A_220 B_2517 E_2068 -- endn_99999 endc_99999 INPDB CPL Disulfide bond isomerase, DsbC, N-terminal domain--Thioredoxin-like-- 55804_55594_ 55804_55594_ B_20 5_2_3 20 A_2 B_304 E_123 --B_137 E_2 -- endn_55804 endc_99999_47831 NOTPDB CPL Phoshotransferase/anion transport protein--HPr-like-- 56112_54184_ 56112_54184_ B_6 3_1_2 6 A_114 B_971 E_9319 --A_7 B_84 E_2 -- endn 54184_99999 NOTPDB CPL Protein kinase-like (PK-like)--Penicillin-binding protein 2x (pbp-2x), c-terminal domain-- 52540_51230_ 52540_51230_ B_2 3_1_2 2 A_2129 B_14320 E_12913 --A_35 B_1330 E_195 -- endn 53067_56954 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Single hybrid motif-- 47413_50475_ 47413_50475_ B_3 3_2_1 3 A_123 B_1973 E_199 --A_59 B_417 E_63 -- endn_99999 endc NOTPDB CPL lambda repressor-like DNA-binding domains--FMN-binding split barrel-- 51717_56014_ 51717_56014_ B_5 5_4_1 5 A_77 B_207 E_36 --A_25 B_194 E_20 -- 51569_endn_50156_99999 endc NOTPDB CPL Dihydropteroate synthetase-like--Sulfite reductase hemoprotein (SiRHP), domains 2 and 4-- 51120_51120_ 51120_51120_ B_23 8_4_4 23 B_123 E_18 --B_123 E_18 -- endn_51120_48726_99999 53474_51120_endc_99999 NOTPDB RPT Serralysin-like metalloprotease, C-terminal domain--Serralysin-like metalloprotease, C-terminal domain-- 46579_55785_ 46579_55785_ B_3 3_1_2 3 A_61 B_31 E_251 --A_168 B_1284 E_394 -- endn 47384_55785 NOTPDB CPL Prefoldin--PYP-like sensor domain (PAS domain)-- 51055_53955_ 51055_53955_ B_2 3_2_1 2 A_4 B_66 E_8 --A_9 B_652 E_194 -- endn_99999 endc NOTPDB CPL Carbohydrate binding domain--Lysozyme-like-- 56024_46894_ 56024_46894_ B_8 4_3_1 8 A_32 B_314 E_180 --A_87 B_1032 E_48 -- 53383_46785_99999 endc NOTPDB CPL Phospholipase D/nuclease--C-terminal effector domain of the bipartite response regulators-- 53067_53756_ 53067_53756_ B_2 3_1_2 2 A_176 B_1667 E_1029 --A_262 B_1575 E_1122 -- endn 53067_endc NOTPDB CPL Actin-like ATPase domain--UDP-Glycosyltransferase/glycogen phosphorylase-- 46689_51182_ 46689_51182_ B_2 4_2_2 2 A_246 B_4125 E_4002 --A_107 B_1063 E_385 -- endn_46689 endc_46689 NOTPDB CPL Homeodomain-like--RmlC-like cupins-- 53850_52540_ 53850_52540_ B_4 4_1_3 4 A_257 B_5627 E_740 --A_2129 B_14320 E_12913 -- endn 52540_endc_99999 NOTPDB CPL Periplasmic binding protein-like II--P-loop containing nucleotide triphosphate hydrolases-- 48452_53955_ 48452_53955_ B_4 3_2_1 4 A_146 B_1937 E_3442 --A_9 B_652 E_194 -- endn_99999 endc NOTPDB CPL TPR-like--Lysozyme-like-- 53822_46689_ 53822_46689_ B_12 3_1_2 12 A_49 B_1285 E_794 --A_246 B_4125 E_4002 -- endn endc_46689 NOTPDB CPL Periplasmic binding protein-like I--Homeodomain-like-- 53795_50886_ 53795_50886_ B_4 3_1_2 4 A_421 B_3843 E_485 --A_1 B_38 E_24 -- endn 50331_99999 NOTPDB CPL PEP carboxykinase-like--D-aminopeptidase, middle and C-terminal domains-- 49313_51120_ 49313_51120_ B_2 4_2_2 2 A_3 B_17 E_754 --B_123 E_18 -- 49313_99999 51120_99999 NOTPDB CPL Cadherin--Serralysin-like metalloprotease, C-terminal domain-- 51261_51230_ 51261_51230_ B_6 3_2_1 6 A_11 B_271 E_40 --A_35 B_1330 E_195 -- 51445_53850 endc NOTPDB CPL Duplicated hybrid motif--Single hybrid motif-- 51206_48452_ 51206_48452_ B_3 3_1_2 3 A_2 B_447 E_467 --A_146 B_1937 E_3442 -- endn 51206_endc NOTPDB CPL cAMP-binding domain-like--TPR-like-- 54106_47090_ 54106_47090_ B_3 4_2_2 3 B_368 E_99 --A_5 B_242 E_88 -- 54106_55846 54106_endc NOTPDB CPL LysM domain--PGBD-like-- 49265_48208_ 49265_48208_ B_2 3_2_1 2 A_23 B_135 E_1734 --A_67 B_360 E_274 -- endn_99999 endc NOTPDB CPL Fibronectin type III--Six-hairpin glycosyltransferases-- 53383_51735_ 53383_51735_ B_3 5_3_2 3 A_367 B_2974 E_1139 --A_993 B_8798 E_3827 -- 46626_endn_51905 endc_99999 NOTPDB CPL PLP-dependent transferases--NAD(P)-binding Rossmann-fold domains-- 46689_48019_ 46689_48019_ B_2 3_1_2 2 A_246 B_4125 E_4002 --A_24 B_335 E_97 -- endn endc_99999 NOTPDB CPL Homeodomain-like--DNA polymerase III clamp loader subunits, C-terminal domain-- 56784_53383_ 56784_53383_ B_2 3_2_1 2 A_230 B_1745 E_1267 --A_367 B_2974 E_1139 -- endn_81665 endc NOTPDB CPL HAD-like--PLP-dependent transferases-- 49373_52540_ 49373_52540_ B_3 4_2_2 3 A_20 B_171 E_29 --A_2129 B_14320 E_12913 -- 81321_endn 52540_99999 NOTPDB CPL Invasin/intimin cell-adhesion fragments--P-loop containing nucleotide triphosphate hydrolases-- 82057_82057_ 82057_82057_ B_11 5_3_2 11 B_31 E_5 --B_31 E_5 -- 81296_55846_53955 82057_endc INPDB RPT GW domain--GW domain-- 81606_52172_ 81606_52172_ B_4 3_1_2 4 A_2 B_180 E_410 --A_85 B_3166 E_241 -- endn 55781_99999 NOTPDB CPL Protein serine/threonine phosphatase 2C, catalytic domain--CheY-like-- 46548_48371_ 46548_48371_ B_6 3_2_1 6 A_125 B_477 E_67 --A_73 B_255 E_3951 -- 52402_99999 endc NOTPDB CPL alpha-helical ferredoxin--ARM repeat-- 52833_47240_ 52833_47240_ B_2 3_1_2 2 A_220 B_2517 E_2068 --A_126 B_660 E_337 -- endn 47616_endc NOTPDB CPL Thioredoxin-like--Ferritin-like-- 50494_51055_ 50494_51055_ B_3 3_2_1 3 A_19 B_482 E_1600 --A_4 B_66 E_8 -- 51905_54806 endc NOTPDB CPL Trypsin-like serine proteases--Carbohydrate binding domain-- 56954_50249_ 56954_50249_ B_3 3_1_2 3 B_451 E_40 --A_390 B_2734 E_1438 -- endn endc_99999 NOTPDB CPL Integral outer membrane protein TolC, efflux pump component--Nucleic acid-binding proteins-- 52210_52540_ 52210_52540_ B_3 4_2_2 3 A_60 B_218 E_78 --A_2129 B_14320 E_12913 -- endn_99999 52540_endc NOTPDB CPL Succinyl-CoA synthetase domains--P-loop containing nucleotide triphosphate hydrolases-- 55186_52540_ 55186_52540_ B_8 5_3_2 8 A_42 B_237 E_81 --A_2129 B_14320 E_12913 -- endn_81271_99999 52540_endc NOTPDB CPL Threonyl-tRNA synthetase (ThrRS), second 'additional' domain--P-loop containing nucleotide triphosphate hydrolases-- 75138_54631_ 75138_54631_ B_23 6_4_2 23 A_4 B_98 E_2 --A_209 B_782 E_239 -- 75138_54631_56053_46785 54631_64182 NOTPDB CPL HPr kinase/phoshatase HprK N-terminal domain--CBS-domain-- 53448_52540_ 53448_52540_ B_3 4_2_2 3 A_346 B_1868 E_1125 --A_2129 B_14320 E_12913 -- 52540_endn 52540_endc NOTPDB CPL Nucleotide-diphospho-sugar transferases--P-loop containing nucleotide triphosphate hydrolases-- 49879_55781_ 49879_55781_ B_3 4_1_3 3 A_4 B_172 E_486 --A_54 B_1030 E_131 -- endn 52540_55073_99999 NOTPDB CPL SMAD/FHA domain--GAF domain-like-- 52518_52096_ 52518_52096_ B_2 3_2_1 2 A_239 B_1128 E_328 --A_96 B_1208 E_331 -- 53933_endn endc NOTPDB CPL Thiamin diphosphate-binding fold (THDP-binding)--ClpP/crotonase-- 52091_51206_ 52091_51206_ B_3 3_2_1 3 A_1 B_373 E_131 --A_2 B_447 E_467 -- 56601_99999 endc NOTPDB CPL Anti-sigma factor antagonist SpoIIaa--cAMP-binding domain-like-- 46785_53067_ 46785_53067_ B_66 7_2_5 66 A_1241 B_7979 E_2143 --A_176 B_1667 E_1029 -- endn_99999 53067_52317_endc_55073_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Actin-like ATPase domain-- 52266_56935_ 52266_56935_ B_2 3_2_1 2 A_1 B_380 E_396 --B_1350 E_155 -- endn_99999 endc NOTPDB CPL Esterase/acetylhydrolase--Porins-- 53098_52113_ 53098_52113_ B_2 3_2_1 2 A_290 B_2494 E_2335 --A_1 B_117 E_366 -- endn_99999 endc NOTPDB CPL Ribonuclease H-like--BRCT domain-- 55781_52540_ 55781_52540_ B_39 8_4_4 39 A_54 B_1030 E_131 --A_2129 B_14320 E_12913 -- endn_55781_49879_99999 endc_48283_99999_46689 NOTPDB CPL GAF domain-like--P-loop containing nucleotide triphosphate hydrolases-- 53383_55073_ 53383_55073_ B_3 3_2_1 3 A_367 B_2974 E_1139 --A_5 B_639 E_400 -- endn_99999 endc NOTPDB CPL PLP-dependent transferases--Adenylyl and guanylyl cyclase catalytic domain-- 52016_53732_ 52016_53732_ B_32 4_2_2 32 A_33 B_193 E_111 --A_34 B_191 E_68 -- 74778_99999 endc_99999 INPDB CPL Aconitase--Aconitase iron-sulfur domain-- 48024_52540_ 48024_52540_ B_101 4_2_2 101 A_1 B_120 E_1 --A_2129 B_14320 E_12913 -- endn_99999 51294_endc NOTPDB CPL N-terminal domain of DnaB helicase--P-loop containing nucleotide triphosphate hydrolases-- 48435_53955_ 48435_53955_ B_37 6_4_2 37 B_39 E_2 --A_9 B_652 E_194 -- endn_48435_48452_99999 endc_99999 INPDB CPL Bacterial muramidases--Lysozyme-like-- 49879_55785_ 49879_55785_ B_2 3_1_2 2 A_4 B_172 E_486 --A_168 B_1284 E_394 -- endn 55781_55785 NOTPDB CPL SMAD/FHA domain--PYP-like sensor domain (PAS domain)-- 52540_55753_ 52540_55753_ B_2 3_2_1 2 A_2129 B_14320 E_12913 --A_1 B_17 E_251 -- endn_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Actin depolymerizing proteins-- 63520_52794_ 63520_52794_ B_26 4_2_2 26 B_147 E_5 --B_191 E_4 -- 63520_99999 55804_endc NOTPDB CPL PTS-regulatory domain, PRD--Enzyme IIB-cellobiose-- 51905_46785_ 51905_46785_ B_7 5_3_2 7 A_358 B_2910 E_1243 --A_1241 B_7979 E_2143 -- endn_47781_99999 endc_99999 NOTPDB CPL FAD/NAD(P)-binding domain--"Winged helix" DNA-binding domain-- 48452_53822_ 48452_53822_ B_5 3_2_1 5 A_146 B_1937 E_3442 --A_49 B_1285 E_794 -- endn_53822 endc NOTPDB CPL TPR-like--Periplasmic binding protein-like I-- 47413_48329_ 47413_48329_ B_2 3_1_2 2 A_123 B_1973 E_199 --A_9 B_1007 E_45 -- endn 48329_99999 NOTPDB CPL lambda repressor-like DNA-binding domains--RNA polymerase sigma subunit-- 46626_48695_ 46626_48695_ B_9 7_4_3 9 A_40 B_894 E_220 --A_18 B_378 E_163 -- 46626_endn_48695_99999 46626_49899_endc NOTPDB CPL Cytochrome c--Multiheme cytochromes-- 51905_46946_ 51905_46946_ B_4 3_1_2 4 A_358 B_2910 E_1243 --A_48 B_219 E_75 -- endn endc_99999 NOTPDB CPL FAD/NAD(P)-binding domain--S13-like H2TH domain-- 55961_52833_ 55961_52833_ B_2 3_1_2 2 A_9 B_245 E_370 --A_220 B_2517 E_2068 -- endn 47616_endc NOTPDB CPL Bet v1-like--Thioredoxin-like-- 52540_63520_ 52540_63520_ B_18 4_2_2 18 A_2129 B_14320 E_12913 --B_147 E_5 -- endn_46785 53062_63520 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--PTS-regulatory domain, PRD-- 81606_55874_ 81606_55874_ B_7 4_3_1 7 A_2 B_180 E_410 --A_178 B_2970 E_398 -- endn_55781_52172 endc NOTPDB CPL Protein serine/threonine phosphatase 2C, catalytic domain--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 49879_52540_ 49879_52540_ B_6 5_3_2 6 A_4 B_172 E_486 --A_2129 B_14320 E_12913 -- endn_51161_49879 52540_99999 NOTPDB CPL SMAD/FHA domain--P-loop containing nucleotide triphosphate hydrolases-- 55068_51316_ 55068_51316_ B_17 3_2_1 17 A_6 B_116 E_34 --A_7 B_93 E_90 -- endn_52833 endc NOTPDB CPL Peptide methionine sulfoxide reductase--Mss4-like-- 49373_52058_ 49373_52058_ B_4 4_2_2 4 A_20 B_171 E_29 --A_6 B_143 E_2568 -- 49373_99999 endc_99999 NOTPDB CPL Invasin/intimin cell-adhesion fragments--L domain-like-- 46548_53822_ 46548_53822_ B_2 3_1_2 2 A_125 B_477 E_67 --A_49 B_1285 E_794 -- endn endc_99999 NOTPDB CPL alpha-helical ferredoxin--Periplasmic binding protein-like I-- 46894_48452_ 46894_48452_ B_22 10_5_5 22 A_87 B_1032 E_48 --A_146 B_1937 E_3442 -- endn_48329_52172_56112_99999 52540_endc_55073_99999_49879 NOTPDB CPL C-terminal effector domain of the bipartite response regulators--TPR-like-- 53335_53474_ 53335_53474_ B_3 4_2_2 3 A_733 B_3918 E_2070 --A_141 B_2949 E_2909 -- endn_99999 endc_56214 NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--alpha/beta-Hydrolases-- 50249_51419_ 50249_51419_ B_2 3_1_2 2 A_390 B_2734 E_1438 --A_13 B_426 E_106 -- endn 51569_50621 NOTPDB CPL Nucleic acid-binding proteins--PLP-binding barrel-- 51261_55594_ 51261_55594_ B_5 3_1_2 5 A_11 B_271 E_40 --B_137 E_2 -- endn 99999_47831 NOTPDB CPL Duplicated hybrid motif--HPr-like-- 46894_54427_ 46894_54427_ B_21 3_2_1 21 A_87 B_1032 E_48 --A_11 B_446 E_248 -- endn_48329 endc NOTPDB CPL C-terminal effector domain of the bipartite response regulators--NTF2-like-- 48695_46626_ 48695_46626_ B_29 6_3_3 29 A_18 B_378 E_163 --A_40 B_894 E_220 -- 46626_endn_99999 48695_endc_99999 NOTPDB CPL Multiheme cytochromes--Cytochrome c-- 51649_51649_ 51649_51649_ B_2 3_2_1 2 A_10 B_28 E_33 --A_10 B_28 E_33 -- endn_49373 endc NOTPDB RPT RuBisCo, C-terminal domain--RuBisCo, C-terminal domain-- 53448_48439_ 53448_48439_ B_3 3_2_1 3 A_346 B_1868 E_1125 --A_48 B_249 E_670 -- endn_99999 endc NOTPDB CPL Nucleotide-diphospho-sugar transferases--Protein prenylyltransferase-- 56988_49785_ 56988_49785_ B_3 4_2_2 3 B_20 E_4 --A_10 B_366 E_724 -- 50952_endn 49303_99999 NOTPDB CPL Anthrax protective antigen--Galactose-binding domain-like-- 48452_56935_ 48452_56935_ B_10 4_2_2 10 A_146 B_1937 E_3442 --B_1350 E_155 -- endn_99999 endc_99999 NOTPDB CPL TPR-like--Porins-- 55811_53254_ 55811_53254_ B_7 3_2_1 7 A_61 B_850 E_338 --A_18 B_402 E_440 -- endn_99999 endc NOTPDB CPL Nudix--Phosphoglycerate mutase-like-- 51395_82866_ 51395_82866_ B_3 4_2_2 3 A_111 B_849 E_252 --A_45 B_639 E_196 -- 82866_99999 endc_99999 NOTPDB CPL FMN-linked oxidoreductases--Multidrug efflux transporter AcrB transmembrane domain-- 52540_48576_ 52540_48576_ B_5 5_2_3 5 A_2129 B_14320 E_12913 --A_32 B_270 E_227 -- 52540_endn 52540_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Terpenoid synthases-- 47226_52172_ 47226_52172_ B_4 5_2_3 4 A_9 B_246 E_33 --A_85 B_3166 E_241 -- endn_99999 52172_55785_99999 NOTPDB CPL Histidine-containing phosphotransfer domain, HPT domain--CheY-like-- 52343_51735_ 52343_51735_ B_2 4_2_2 2 A_34 B_384 E_315 --A_993 B_8798 E_3827 -- endn_51735 endc_99999 NOTPDB CPL Ferredoxin reductase-like, C-terminal NADP-linked domain--NAD(P)-binding Rossmann-fold domains-- 56935_56935_ 56935_56935_ B_9 5_3_2 9 B_1350 E_155 --B_1350 E_155 -- 52743_endn_99999 endc_99999 NOTPDB RPT Porins--Porins-- 53335_47336_ 53335_47336_ B_8 6_2_4 8 A_733 B_3918 E_2070 --A_4 B_486 E_88 -- 56801_99999 52777_53474_endc_99999 NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--ACP-like-- 54631_53448_ 54631_53448_ B_7 3_2_1 7 A_209 B_782 E_239 --A_346 B_1868 E_1125 -- 53697_54631 endc NOTPDB CPL CBS-domain--Nucleotide-diphospho-sugar transferases-- 49503_50998_ 49503_50998_ B_2 3_2_1 2 A_81 B_368 E_450 --A_73 B_392 E_284 -- endn_49503 endc NOTPDB CPL Cupredoxins--Quinoprotein alcohol dehydrogenase-like-- 49785_81296_ 49785_81296_ B_4 4_2_2 4 A_10 B_366 E_724 --A_40 B_404 E_1207 -- endn_99999 48230_48208 NOTPDB CPL Galactose-binding domain-like--E set domains-- 55486_48439_ 55486_48439_ B_7 4_2_2 7 A_64 B_735 E_1617 --A_48 B_249 E_670 -- endn_55486 51126_endc NOTPDB CPL Metalloproteases ("zincins"), catalytic domain--Protein prenylyltransferase-- 46689_47473_ 46689_47473_ B_2 3_2_1 2 A_246 B_4125 E_4002 --A_51 B_190 E_2808 -- endn_46689 endc NOTPDB CPL Homeodomain-like--EF-hand-- 53474_52259_ 53474_52259_ B_8 3_1_2 8 A_141 B_2949 E_2909 --A_1 B_78 E_20 -- endn endc_99999 NOTPDB CPL alpha/beta-Hydrolases--Cutinase-like-- 56601_54184_ 56601_54184_ B_36 4_2_2 36 A_15 B_1220 E_127 --A_7 B_84 E_2 -- 56519_99999 54184_endc INPDB CPL beta-Lactamase/D-ala carboxypeptidase--Penicillin-binding protein 2x (pbp-2x), c-terminal domain-- 51735_56059_ 51735_56059_ B_5 3_1_2 5 A_993 B_8798 E_3827 --A_192 B_1104 E_490 -- endn endc_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Glutathione synthetase ATP-binding domain-like-- 53790_69618_ 53790_69618_ B_23 3_2_1 23 A_91 B_360 E_29 --A_16 B_97 E_20 -- endn_99999 endc NOTPDB CPL Cobalt precorrin-4 methyltransferase CbiF--Uroporphyrinogen III synthase (U3S, HemD)-- 50494_53649_ 50494_53649_ B_2 3_2_1 2 A_19 B_482 E_1600 --A_60 B_683 E_430 -- endn_99999 endc NOTPDB CPL Trypsin-like serine proteases--Alkaline phosphatase-like-- 51735_48150_ 51735_48150_ B_2 3_1_2 2 A_993 B_8798 E_3827 --A_68 B_400 E_107 -- endn endc_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--DNA-glycosylase-- 81901_47090_ 81901_47090_ B_5 3_2_1 5 B_153 E_123 --A_5 B_242 E_88 -- endn_99999 endc NOTPDB CPL Cysteine rich protein B (HcpB)--PGBD-like-- 49899_50370_ 49899_50370_ B_3 3_2_1 3 A_22 B_208 E_1314 --B_67 E_219 -- endn_99999 endc NOTPDB CPL Concanavalin A-like lectins/glucanases--Ricin B-like lectins-- 48452_55073_ 48452_55073_ B_4 5_2_3 4 A_146 B_1937 E_3442 --A_5 B_639 E_400 -- 46894_99999 52540_endc_99999 NOTPDB CPL TPR-like--Adenylyl and guanylyl cyclase catalytic domain-- 52540_56349_ 52540_56349_ B_4 4_2_2 4 A_2129 B_14320 E_12913 --A_59 B_801 E_85 -- endn_99999 81296_endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--DNA breaking-rejoining enzymes-- 53901_52743_ 53901_52743_ B_2 3_2_1 2 A_95 B_891 E_374 --A_34 B_214 E_253 -- 52080_endn endc NOTPDB CPL Thiolase-like--Subtilisin-like-- 51905_53383_ 51905_53383_ B_3 4_1_3 3 A_358 B_2910 E_1243 --A_367 B_2974 E_1139 -- endn 51735_endc_99999 NOTPDB CPL FAD/NAD(P)-binding domain--PLP-dependent transferases-- 57938_52540_ 57938_52540_ B_7 5_2_3 7 A_19 B_61 E_147 --A_2129 B_14320 E_12913 -- endn_99999 52540_53795_99999 NOTPDB CPL Cysteine-rich domain of the chaperone protein DnaJ.--P-loop containing nucleotide triphosphate hydrolases-- 56601_52091_ 56601_52091_ B_4 3_1_2 4 A_15 B_1220 E_127 --A_1 B_373 E_131 -- endn 51206_endc NOTPDB CPL beta-Lactamase/D-ala carboxypeptidase--Anti-sigma factor antagonist SpoIIaa-- 55594_55785_ 55594_55785_ B_2 3_1_2 2 B_137 E_2 --A_168 B_1284 E_394 -- endn 52540_55785 NOTPDB CPL HPr-like--PYP-like sensor domain (PAS domain)-- 52540_56112_ 52540_56112_ B_5 3_1_2 5 A_2129 B_14320 E_12913 --A_114 B_971 E_9319 -- endn 52540_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Protein kinase-like (PK-like)-- 55486_49785_ 55486_49785_ B_3 4_2_2 3 A_64 B_735 E_1617 --A_10 B_366 E_724 -- endn_99999 49785_endc NOTPDB CPL Metalloproteases ("zincins"), catalytic domain--Galactose-binding domain-like-- 47413_55785_ 47413_55785_ B_7 4_1_3 7 A_123 B_1973 E_199 --A_168 B_1284 E_394 -- endn 63411_endc_99999 NOTPDB CPL lambda repressor-like DNA-binding domains--PYP-like sensor domain (PAS domain)-- 46579_56935_ 46579_56935_ B_4 3_1_2 4 A_61 B_31 E_251 --B_1350 E_155 -- endn endc_99999 NOTPDB CPL Prefoldin--Porins-- 56601_69189_ 56601_69189_ B_81 4_2_2 81 A_15 B_1220 E_127 --A_1 B_82 E_1 -- endn_99999 endc_99999 INPDB CPL beta-Lactamase/D-ala carboxypeptidase--Penicillin-binding protein 5, C-terminal domain-- 55785_48283_ 55785_48283_ B_3 5_3_2 3 A_168 B_1284 E_394 --B_220 E_14 -- 52540_55785_99999 endc_99999 NOTPDB CPL PYP-like sensor domain (PAS domain)--FIS-like-- 52096_55729_ 52096_55729_ B_3 4_2_2 3 A_96 B_1208 E_331 --A_217 B_2438 E_800 -- 52096_endn endc_99999 NOTPDB CPL ClpP/crotonase--Acyl-CoA N-acyltransferases (Nat)-- 52058_81296_ 52058_81296_ B_18 4_2_2 18 A_6 B_143 E_2568 --A_40 B_404 E_1207 -- endn_99999 82057_99999 INPDB CPL L domain-like--E set domains-- 55846_47090_ 55846_47090_ B_24 3_1_2 24 B_142 E_52 --A_5 B_242 E_88 -- endn endc_99999 NOTPDB CPL N-acetylmuramoyl-L-alanine amidase-like--PGBD-like-- 53448_53335_ 53448_53335_ B_4 3_2_1 4 A_346 B_1868 E_1125 --A_733 B_3918 E_2070 -- 53448_endn endc NOTPDB CPL Nucleotide-diphospho-sugar transferases--S-adenosyl-L-methionine-dependent methyltransferases-- 53474_51735_ 53474_51735_ B_10 4_2_2 10 A_141 B_2949 E_2909 --A_993 B_8798 E_3827 -- endn_47336 endc_99999 NOTPDB CPL alpha/beta-Hydrolases--NAD(P)-binding Rossmann-fold domains-- 46894_52964_ 46894_52964_ B_6 4_2_2 6 A_87 B_1032 E_48 --A_1 B_66 E_1 -- endn_99999 48452_48439 NOTPDB CPL C-terminal effector domain of the bipartite response regulators--TolB, N-terminal domain-- 53335_54593_ 53335_54593_ B_2 4_2_2 2 A_733 B_3918 E_2070 --A_36 B_950 E_142 -- endn_99999 53335_endc NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase-- 51055_51445_ 51055_51445_ B_3 4_2_2 3 A_4 B_66 E_8 --A_89 B_1646 E_1474 -- endn_51055 54556_endc NOTPDB CPL Carbohydrate binding domain--(Trans)glycosidases-- 50249_54236_ 50249_54236_ B_4 4_2_2 4 A_390 B_2734 E_1438 --A_18 B_81 E_1815 -- endn_99999 endc_99999 NOTPDB CPL Nucleic acid-binding proteins--Ubiquitin-like-- 53335_51905_ 53335_51905_ B_11 6_3_3 11 A_733 B_3918 E_2070 --A_358 B_2910 E_1243 -- 53335_endn_99999 54373_endc_99999 NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--FAD/NAD(P)-binding domain-- 81606_55781_ 81606_55781_ B_4 4_2_2 4 A_2 B_180 E_410 --A_54 B_1030 E_131 -- endn_55785 55781_99999 NOTPDB CPL Protein serine/threonine phosphatase 2C, catalytic domain--GAF domain-like-- 55804_52794_ 55804_52794_ B_3 3_1_2 3 A_2 B_304 E_123 --B_191 E_4 -- endn endc_99999 NOTPDB CPL Phoshotransferase/anion transport protein--Enzyme IIB-cellobiose-- 46548_53474_ 46548_53474_ B_2 3_1_2 2 A_125 B_477 E_67 --A_141 B_2949 E_2909 -- endn endc_99999 NOTPDB CPL alpha-helical ferredoxin--alpha/beta-Hydrolases-- 53167_53167_ 53167_53167_ B_9 3_2_1 9 A_41 B_308 E_92 --A_41 B_308 E_92 -- endn_49611 endc NOTPDB RPT Purine and uridine phosphorylases--Purine and uridine phosphorylases-- 52096_51604_ 52096_51604_ B_3 3_2_1 3 A_96 B_1208 E_331 --A_64 B_382 E_137 -- endn_52096 endc NOTPDB CPL ClpP/crotonase--Enolase C-terminal domain-like-- 53187_46785_ 53187_46785_ B_3 3_2_1 3 A_105 B_1042 E_648 --A_1241 B_7979 E_2143 -- endn_99999 endc NOTPDB CPL Zn-dependent exopeptidases--"Winged helix" DNA-binding domain-- 47226_55052_ 47226_55052_ B_8 3_1_2 8 A_9 B_246 E_33 --B_9 -- endn 47384_99999 NOTPDB CPL Histidine-containing phosphotransfer domain, HPT domain--CheY-binding domain of CheA-- 53795_55008_ 53795_55008_ B_4 3_1_2 4 A_421 B_3843 E_485 --A_44 B_256 E_222 -- endn endc_99999 NOTPDB CPL PEP carboxykinase-like--Metal-binding domain-- 81606_55785_ 81606_55785_ B_11 6_3_3 11 A_2 B_180 E_410 --A_168 B_1284 E_394 -- endn_55781_55785 55781_55785_99999 NOTPDB CPL Protein serine/threonine phosphatase 2C, catalytic domain--PYP-like sensor domain (PAS domain)-- 55073_48452_ 55073_48452_ B_9 4_3_1 9 A_5 B_639 E_400 --A_146 B_1937 E_3442 -- endn_55785_99999 endc NOTPDB CPL Adenylyl and guanylyl cyclase catalytic domain--TPR-like-- 63393_48695_ 63393_48695_ B_2 3_1_2 2 A_121 B_137 E_69 --A_18 B_378 E_163 -- endn endc_99999 NOTPDB CPL RBP12 subunit of RNA polymerase II--Multiheme cytochromes-- 50249_56796_ 50249_56796_ B_19 3_1_2 19 A_390 B_2734 E_1438 --A_47 B_341 E_47 -- endn endc_99999 NOTPDB CPL Nucleic acid-binding proteins--Dehydroquinate synthase-like-- 46785_48403_ 46785_48403_ B_2 4_2_2 2 A_1241 B_7979 E_2143 --A_4 B_168 E_2348 -- endn_99999 endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Ankyrin repeat-- 48439_50998_ 48439_50998_ B_2 3_2_1 2 A_48 B_249 E_670 --A_73 B_392 E_284 -- endn_99999 endc NOTPDB CPL Protein prenylyltransferase--Quinoprotein alcohol dehydrogenase-like-- 53335_48452_ 53335_48452_ B_4 4_3_1 4 A_733 B_3918 E_2070 --A_146 B_1937 E_3442 -- endn_47757_99999 endc NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--TPR-like-- 53955_47090_ 53955_47090_ B_4 4_2_2 4 A_9 B_652 E_194 --A_5 B_242 E_88 -- endn_99999 endc_99999 NOTPDB CPL Lysozyme-like--PGBD-like-- 52374_82114_ 52374_82114_ B_94 3_1_2 94 A_247 B_1540 E_642 --B_97 E_19 -- endn endc_52402 NOTPDB CPL Nucleotidylyl transferase--Riboflavin kinase-- 47226_47384_ 47226_47384_ B_7 5_3_2 7 A_9 B_246 E_33 --A_45 B_1750 E_74 -- 47226_endn_99999 99999_55874 NOTPDB CPL Histidine-containing phosphotransfer domain, HPT domain--Homodimeric domain of signal transducing histidine kinase-- 52540_51604_ 52540_51604_ B_5 7_4_3 5 A_2129 B_14320 E_12913 --A_64 B_382 E_137 -- endn_57701_54495_48695 52540_53795_endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Enolase C-terminal domain-like-- 53955_54106_ 53955_54106_ B_25 6_3_3 25 A_9 B_652 E_194 --B_368 E_99 -- endn_53955_99999 54106_endc_99999 NOTPDB CPL Lysozyme-like--LysM domain-- 53474_55073_ 53474_55073_ B_7 3_1_2 7 A_141 B_2949 E_2909 --A_5 B_639 E_400 -- endn 46894_endc NOTPDB CPL alpha/beta-Hydrolases--Adenylyl and guanylyl cyclase catalytic domain-- 48619_55073_ 48619_55073_ B_8 3_2_1 8 B_72 E_158 --A_5 B_639 E_400 -- 51395_99999 endc NOTPDB CPL Phospholipase A2, PLA2--Adenylyl and guanylyl cyclase catalytic domain-- 56300_49899_ 56300_49899_ B_3 3_2_1 3 A_170 B_837 E_750 --A_22 B_208 E_1314 -- endn_99999 endc NOTPDB CPL Metallo-dependent phosphatases--Concanavalin A-like lectins/glucanases-- 53448_56112_ 53448_56112_ B_5 4_2_2 5 A_346 B_1868 E_1125 --A_114 B_971 E_9319 -- endn_46785 endc_99999 NOTPDB CPL Nucleotide-diphospho-sugar transferases--Protein kinase-like (PK-like)-- 53850_53300_ 53850_53300_ B_7 3_2_1 7 A_257 B_5627 E_740 --A_51 B_345 E_996 -- endn_99999 endc NOTPDB CPL Periplasmic binding protein-like II--vWA-like-- 53850_53474_ 53850_53474_ B_2 3_1_2 2 A_257 B_5627 E_740 --A_141 B_2949 E_2909 -- endn 51126_endc NOTPDB CPL Periplasmic binding protein-like II--alpha/beta-Hydrolases-- 57802_47240_ 57802_47240_ B_10 3_1_2 10 A_77 B_171 E_177 --A_126 B_660 E_337 -- endn endc_57802 NOTPDB CPL Rubredoxin-like--Ferritin-like-- 48452_50998_ 48452_50998_ B_5 4_3_1 5 A_146 B_1937 E_3442 --A_73 B_392 E_284 -- endn_55718_99999 endc NOTPDB CPL TPR-like--Quinoprotein alcohol dehydrogenase-like-- 53955_55846_ 53955_55846_ B_6 4_2_2 6 A_9 B_652 E_194 --B_142 E_52 -- endn_99999 69318_99999 NOTPDB CPL Lysozyme-like--N-acetylmuramoyl-L-alanine amidase-like-- 54373_53335_ 54373_53335_ B_2 3_2_1 2 A_16 B_381 E_311 --A_733 B_3918 E_2070 -- endn_51905 endc NOTPDB CPL FAD-linked reductases, C-terminal domain--S-adenosyl-L-methionine-dependent methyltransferases-- 51604_52540_ 51604_52540_ B_3 4_2_2 3 A_64 B_382 E_137 --A_2129 B_14320 E_12913 -- 52540_endn endc_55729 NOTPDB CPL Enolase C-terminal domain-like--P-loop containing nucleotide triphosphate hydrolases-- 55729_53335_ 55729_53335_ B_2 3_2_1 2 A_217 B_2438 E_800 --A_733 B_3918 E_2070 -- 48013_endn endc NOTPDB CPL Acyl-CoA N-acyltransferases (Nat)--S-adenosyl-L-methionine-dependent methyltransferases-- 50249_52402_ 50249_52402_ B_5 3_1_2 5 A_390 B_2734 E_1438 --A_350 B_1402 E_436 -- endn 52821_99999 NOTPDB CPL Nucleic acid-binding proteins--Adenine nucleotide alpha hydrolases-like-- 46955_46689_ 46955_46689_ B_3 4_2_2 3 A_55 B_784 E_148 --A_246 B_4125 E_4002 -- endn_51182 endc_99999 NOTPDB CPL Putative DNA-binding domain--Homeodomain-like-- 51998_75625_ 51998_75625_ B_4 5_3_2 4 A_39 B_258 E_33 --B_121 E_26 -- 75625_48168_99999 endc_57783 NOTPDB CPL PFL-like glycyl radical enzymes--YebC-like-- 48239_81853_ 48239_81853_ B_2 3_2_1 2 A_29 B_94 E_322 --A_7 B_20 E_5 -- endn_99999 endc NOTPDB CPL Terpenoid cylases/Protein prenyltransferases--Family 10 polysaccharide lyase-- 54328_54328_ 54328_54328_ B_4 4_2_2 4 A_4 B_13 E_26 --A_4 B_13 E_26 -- endn_99999 54328_99999 INPDB RPT Staphylokinase/streptokinase--Staphylokinase/streptokinase-- 52833_53756_ 52833_53756_ B_2 4_2_2 2 A_220 B_2517 E_2068 --A_262 B_1575 E_1122 -- endn_99999 53335_endc NOTPDB CPL Thioredoxin-like--UDP-Glycosyltransferase/glycogen phosphorylase-- 53300_48452_ 53300_48452_ B_14 4_2_2 14 A_51 B_345 E_996 --A_146 B_1937 E_3442 -- 48452_99999 endc_99999 NOTPDB CPL vWA-like--TPR-like-- 53850_51445_ 53850_51445_ B_3 3_2_1 3 A_257 B_5627 E_740 --A_89 B_1646 E_1474 -- endn_53850 endc NOTPDB CPL Periplasmic binding protein-like II--(Trans)glycosidases-- 56059_54975_ 56059_54975_ B_7 4_2_2 7 A_192 B_1104 E_490 --A_27 B_115 E_43 -- endn_99999 endc_99999 NOTPDB CPL Glutathione synthetase ATP-binding domain-like--Acylphosphatase-like-- 74653_74653_ 74653_74653_ B_4 4_2_2 4 A_3 B_203 E_28 --A_3 B_203 E_28 -- endn_99999 endc_99999 NOTPDB RPT TolA/TonB C-terminal domain--TolA/TonB C-terminal domain-- 55781_48283_ 55781_48283_ B_7 3_2_1 7 A_54 B_1030 E_131 --B_220 E_14 -- endn_99999 endc NOTPDB CPL GAF domain-like--FIS-like-- 52964_50960_ 52964_50960_ B_38 3_2_1 38 A_1 B_66 E_1 --A_34 B_192 E_75 -- endn_99999 endc INPDB CPL TolB, N-terminal domain--TolB, C-terminal domain-- 51366_53067_ 51366_53067_ B_4 3_1_2 4 A_289 B_986 E_160 --A_176 B_1667 E_1029 -- endn endc_99999 NOTPDB CPL Ribulose-phoshate binding barrel--Actin-like ATPase domain-- 75005_49785_ 75005_49785_ B_9 7_4_3 9 A_8 B_151 E_21 --A_10 B_366 E_724 -- endn_49785_49265_99999 49303_endc_99999 NOTPDB CPL alpha-L-arabinanase--Galactose-binding domain-like-- 46689_50249_ 46689_50249_ B_3 3_1_2 3 A_246 B_4125 E_4002 --A_390 B_2734 E_1438 -- endn endc_99999 NOTPDB CPL Homeodomain-like--Nucleic acid-binding proteins-- 50370_75005_ 50370_75005_ B_2 4_2_2 2 B_67 E_219 --A_8 B_151 E_21 -- endn_99999 endc_99999 NOTPDB CPL Ricin B-like lectins--alpha-L-arabinanase-- 47090_54106_ 47090_54106_ B_2 4_2_2 2 A_5 B_242 E_88 --B_368 E_99 -- endn_54106 endc_53187 NOTPDB CPL PGBD-like--LysM domain-- 52964_48452_ 52964_48452_ B_17 6_4_2 17 A_1 B_66 E_1 --A_146 B_1937 E_3442 -- endn_46894_55073_99999 endc_99999 NOTPDB CPL TolB, N-terminal domain--TPR-like-- 53901_51735_ 53901_51735_ B_3 4_2_2 3 A_95 B_891 E_374 --A_993 B_8798 E_3827 -- endn_99999 endc_99999 NOTPDB CPL Thiolase-like--NAD(P)-binding Rossmann-fold domains-- 53218_53067_ 53218_53067_ B_3 3_1_2 3 A_63 B_253 E_54 --A_176 B_1667 E_1029 -- endn endc_99999 NOTPDB CPL Molybdenum cofactor biosynthesis proteins--Actin-like ATPase domain-- 56176_52540_ 56176_52540_ B_2 3_2_1 2 A_43 B_454 E_248 --A_2129 B_14320 E_12913 -- endn_99999 endc NOTPDB CPL FAD-binding domain--P-loop containing nucleotide triphosphate hydrolases-- 52821_50249_ 52821_50249_ B_2 3_2_1 2 A_39 B_452 E_298 --A_390 B_2734 E_1438 -- 54975_99999 endc NOTPDB CPL Rhodanese/Cell cycle control phosphatase--Nucleic acid-binding proteins-- 53474_56059_ 53474_56059_ B_2 3_1_2 2 A_141 B_2949 E_2909 --A_192 B_1104 E_490 -- endn 48108_99999 NOTPDB CPL alpha/beta-Hydrolases--Glutathione synthetase ATP-binding domain-like-- 51366_52540_ 51366_52540_ B_3 5_3_2 3 A_289 B_986 E_160 --A_2129 B_14320 E_12913 -- 52540_endn_51905 endc_46689 NOTPDB CPL Ribulose-phoshate binding barrel--P-loop containing nucleotide triphosphate hydrolases-- 54292_55073_ 54292_55073_ B_5 5_3_2 5 A_44 B_565 E_187 --A_5 B_639 E_400 -- endn_53807_99999 48113_endc NOTPDB CPL 2Fe-2S ferredoxin-like--Adenylyl and guanylyl cyclase catalytic domain-- 53098_46689_ 53098_46689_ B_2 4_2_2 2 A_290 B_2494 E_2335 --A_246 B_4125 E_4002 -- endn_51182 endc_99999 NOTPDB CPL Ribonuclease H-like--Homeodomain-like-- 49503_46626_ 49503_46626_ B_20 6_3_3 20 A_81 B_368 E_450 --A_40 B_894 E_220 -- 81464_49503_99999 46626_endc_99999 NOTPDB CPL Cupredoxins--Cytochrome c-- 52540_56849_ 52540_56849_ B_2 4_2_2 2 A_2129 B_14320 E_12913 --A_3 B_13 E_6 -- 52540_99999 52540_endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--delta-Endotoxin (insectocide), N-terminal domain-- 55781_46785_ 55781_46785_ B_21 4_2_2 21 A_54 B_1030 E_131 --A_1241 B_7979 E_2143 -- endn_46785 55781_endc NOTPDB CPL GAF domain-like--"Winged helix" DNA-binding domain-- 55785_51905_ 55785_51905_ B_2 4_2_2 2 A_168 B_1284 E_394 --A_358 B_2910 E_1243 -- endn_99999 endc_99999 NOTPDB CPL PYP-like sensor domain (PAS domain)--FAD/NAD(P)-binding domain-- 50494_55785_ 50494_55785_ B_2 3_1_2 2 A_19 B_482 E_1600 --A_168 B_1284 E_394 -- endn 55890_55874 NOTPDB CPL Trypsin-like serine proteases--PYP-like sensor domain (PAS domain)-- 49899_50939_ 49899_50939_ B_6 5_3_2 6 A_22 B_208 E_1314 --A_3 B_134 E_129 -- endn_49785_99999 endc_99999 INPDB CPL Concanavalin A-like lectins/glucanases--Sialidases (neuraminidases)-- 55469_55469_ 55469_55469_ B_4 4_3_1 4 A_49 B_320 E_26 --A_49 B_320 E_26 -- endn_69572_99999 endc NOTPDB RPT NADH oxidase/flavin reductase--NADH oxidase/flavin reductase-- 55073_52964_ 55073_52964_ B_10 3_1_2 10 A_5 B_639 E_400 --A_1 B_66 E_1 -- endn 48452_48439 NOTPDB CPL Adenylyl and guanylyl cyclase catalytic domain--TolB, N-terminal domain-- 52540_56024_ 52540_56024_ B_4 3_2_1 4 A_2129 B_14320 E_12913 --A_32 B_314 E_180 -- endn_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Phospholipase D/nuclease-- 51395_51971_ 51395_51971_ B_14 3_1_2 14 A_111 B_849 E_252 --A_47 B_404 E_155 -- endn 51735_99999 NOTPDB CPL FMN-linked oxidoreductases--Nucleotide-binding domain-- 57667_46955_ 57667_46955_ B_2 3_1_2 2 A_23 B_24 E_4849 --A_55 B_784 E_148 -- endn endc_99999 NOTPDB CPL C2H2 and C2HC zinc fingers--Putative DNA-binding domain-- 53850_51905_ 53850_51905_ B_2 3_1_2 2 A_257 B_5627 E_740 --A_358 B_2910 E_1243 -- endn 54373_endc NOTPDB CPL Periplasmic binding protein-like II--FAD/NAD(P)-binding domain-- 49785_49265_ 49785_49265_ B_6 4_2_2 6 A_10 B_366 E_724 --A_23 B_135 E_1734 -- endn_99999 49785_51445 NOTPDB CPL Galactose-binding domain-like--Fibronectin type III-- 51445_49899_ 51445_49899_ B_2 4_2_2 2 A_89 B_1646 E_1474 --A_22 B_208 E_1314 -- 56988_49303 49303_50974 NOTPDB CPL (Trans)glycosidases--Concanavalin A-like lectins/glucanases-- 53756_48452_ 53756_48452_ B_6 4_2_2 6 A_262 B_1575 E_1122 --A_146 B_1937 E_3442 -- endn_99999 53756_endc NOTPDB CPL UDP-Glycosyltransferase/glycogen phosphorylase--TPR-like-- 55729_56059_ 55729_56059_ B_3 3_2_1 3 A_217 B_2438 E_800 --A_192 B_1104 E_490 -- endn_99999 endc NOTPDB CPL Acyl-CoA N-acyltransferases (Nat)--Glutathione synthetase ATP-binding domain-like-- 51269_51658_ 51269_51658_ B_4 3_2_1 4 A_4 B_49 E_9 --A_102 B_575 E_65 -- 51366_51569 endc NOTPDB CPL Type III antifreeze protein--Xylose isomerase-like-- 68912_52540_ 68912_52540_ B_23 3_2_1 23 B_106 E_13 --A_2129 B_14320 E_12913 -- endn_99999 endc NOTPDB CPL Rho termination factor, N-terminal domain--P-loop containing nucleotide triphosphate hydrolases-- 51735_51161_ 51735_51161_ B_9 3_2_1 9 A_993 B_8798 E_3827 --A_81 B_714 E_168 -- endn_99999 endc NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Trimeric LpxA-like enzymes-- 50960_69304_ 50960_69304_ B_2 4_2_2 2 A_34 B_192 E_75 --A_4 B_18 E_43 -- endn_51338 51338_endc NOTPDB CPL TolB, C-terminal domain--Tricorn protease N-terminal domain-- 52540_47240_ 52540_47240_ B_3 3_1_2 3 A_2129 B_14320 E_12913 --A_126 B_660 E_337 -- endn endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Ferritin-like-- 46785_54984_ 46785_54984_ B_5 3_1_2 5 A_1241 B_7979 E_2143 --A_22 B_9 E_69 -- endn endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--eEF-1beta-like-- 46458_55874_ 46458_55874_ B_2 3_2_1 2 A_8 B_250 E_257 --A_178 B_2970 E_398 -- 55781_99999 endc NOTPDB CPL Globin-like--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 52743_56935_ 52743_56935_ B_6 4_2_2 6 A_34 B_214 E_253 --B_1350 E_155 -- endn_99999 endc_56935 NOTPDB CPL Subtilisin-like--Porins-- 50974_49503_ 50974_49503_ B_5 4_2_2 5 A_28 B_71 E_18 --A_81 B_368 E_450 -- endn_99999 endc_99999 INPDB CPL Nitrous oxide reductase, N-terminal domain--Cupredoxins-- 52172_81606_ 52172_81606_ B_3 3_1_2 3 A_85 B_3166 E_241 --A_2 B_180 E_410 -- endn 99999_55874 NOTPDB CPL CheY-like--Protein serine/threonine phosphatase 2C, catalytic domain-- 53720_56796_ 53720_56796_ B_27 3_1_2 27 A_55 B_835 E_336 --A_47 B_341 E_47 -- endn endc_99999 NOTPDB CPL ALDH-like--Dehydroquinate synthase-like-- 54631_51230_ 54631_51230_ B_2 3_2_1 2 A_209 B_782 E_239 --A_35 B_1330 E_195 -- endn_54631 endc NOTPDB CPL CBS-domain--Single hybrid motif-- 52540_52922_ 52540_52922_ B_2 3_1_2 2 A_2129 B_14320 E_12913 --A_105 B_497 E_111 -- endn 52317_endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--TK C-terminal domain-like-- 51126_56925_ 51126_56925_ B_3 4_3_1 3 A_116 B_481 E_444 --A_2 B_435 E_26 -- 51126_endn_99999 endc NOTPDB CPL Pectin lyase-like--OMPA-like-- 51338_50960_ 51338_50960_ B_2 3_1_2 2 A_82 B_584 E_154 --A_34 B_192 E_75 -- endn 82171_69304 NOTPDB CPL Composite domain of metallo-dependent hydrolases--TolB, C-terminal domain-- 54106_53187_ 54106_53187_ B_3 4_3_1 3 B_368 E_99 --A_105 B_1042 E_648 -- endn_47090_54106 endc NOTPDB CPL LysM domain--Zn-dependent exopeptidases-- 53474_54427_ 53474_54427_ B_2 3_1_2 2 A_141 B_2949 E_2909 --A_11 B_446 E_248 -- endn 47027_99999 NOTPDB CPL alpha/beta-Hydrolases--NTF2-like-- 46894_48439_ 46894_48439_ B_3 3_2_1 3 A_87 B_1032 E_48 --A_48 B_249 E_670 -- 48329_99999 endc NOTPDB CPL C-terminal effector domain of the bipartite response regulators--Protein prenylyltransferase-- 56925_56925_ 56925_56925_ B_5 4_2_2 5 A_2 B_435 E_26 --A_2 B_435 E_26 -- endn_99999 endc_99999 NOTPDB RPT OMPA-like--OMPA-like-- 47090_55166_ 47090_55166_ B_3 4_3_1 3 A_5 B_242 E_88 --A_1 B_75 E_18 -- endn_47090_99999 endc INPDB CPL PGBD-like--Hedgehog/DD-pepidase-- 48371_46626_ 48371_46626_ B_2 4_2_2 2 A_73 B_255 E_3951 --A_40 B_894 E_220 -- 50952_99999 50952_99999 NOTPDB CPL ARM repeat--Cytochrome c-- 48452_46894_ 48452_46894_ B_30 7_4_3 30 A_146 B_1937 E_3442 --A_87 B_1032 E_48 -- 81901_46626_endn_99999 endc_46785_99999 NOTPDB CPL TPR-like--C-terminal effector domain of the bipartite response regulators-- 53448_48452_ 53448_48452_ B_12 5_1_4 12 A_346 B_1868 E_1125 --A_146 B_1937 E_3442 -- endn 53756_48452_endc_99999 NOTPDB CPL Nucleotide-diphospho-sugar transferases--TPR-like-- 48452_46626_ 48452_46626_ B_2 3_2_1 2 A_146 B_1937 E_3442 --A_40 B_894 E_220 -- endn_99999 endc NOTPDB CPL TPR-like--Cytochrome c-- 49899_49384_ 49899_49384_ B_4 3_1_2 4 A_22 B_208 E_1314 --A_6 B_62 E_34 -- endn 53649_endc NOTPDB CPL Concanavalin A-like lectins/glucanases--Carbohydrate-binding domain-- 56935_51126_ 56935_51126_ B_2 3_2_1 2 B_1350 E_155 --A_116 B_481 E_444 -- endn_99999 endc NOTPDB CPL Porins--Pectin lyase-like-- 46589_46589_ 46589_46589_ B_2 3_1_2 2 A_16 B_318 E_97 --A_16 B_318 E_97 -- endn endc_99999 NOTPDB RPT tRNA-binding arm--tRNA-binding arm-- 48695_53335_ 48695_53335_ B_3 3_1_2 3 A_18 B_378 E_163 --A_733 B_3918 E_2070 -- endn endc_99999 NOTPDB CPL Multiheme cytochromes--S-adenosyl-L-methionine-dependent methyltransferases-- 48329_46689_ 48329_46689_ B_2 4_2_2 2 A_9 B_1007 E_45 --A_246 B_4125 E_4002 -- endn_99999 54427_endc NOTPDB CPL RNA polymerase sigma subunit--Homeodomain-like-- 54534_46626_ 54534_46626_ B_3 4_3_1 3 A_32 B_599 E_266 --A_40 B_894 E_220 -- 53223_99999_81827 endc NOTPDB CPL FKBP-like--Cytochrome c-- 52821_52540_ 52821_52540_ B_15 4_1_3 15 A_39 B_452 E_298 --A_2129 B_14320 E_12913 -- endn 52540_endc_52821 NOTPDB CPL Rhodanese/Cell cycle control phosphatase--P-loop containing nucleotide triphosphate hydrolases-- 53474_50969_ 53474_50969_ B_2 3_2_1 2 A_141 B_2949 E_2909 --A_24 B_218 E_336 -- endn_53474 endc NOTPDB CPL alpha/beta-Hydrolases--YVTN repeat-like/Quinoprotein amine dehydrogenase-- 51735_52402_ 51735_52402_ B_2 3_1_2 2 A_993 B_8798 E_3827 --A_350 B_1402 E_436 -- endn 53790_endc NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Adenine nucleotide alpha hydrolases-like-- 46955_46955_ 46955_46955_ B_13 4_2_2 13 A_55 B_784 E_148 --A_55 B_784 E_148 -- endn_99999 endc_46955 NOTPDB RPT Putative DNA-binding domain--Putative DNA-binding domain-- 47616_52540_ 47616_52540_ B_3 4_2_2 3 A_7 B_434 E_765 --A_2129 B_14320 E_12913 -- endn_99999 52540_endc NOTPDB CPL Glutathione S-transferase (GST), C-terminal domain--P-loop containing nucleotide triphosphate hydrolases-- 51120_53474_ 51120_53474_ B_2 3_2_1 2 B_123 E_18 --A_141 B_2949 E_2909 -- 51120_99999 endc NOTPDB CPL Serralysin-like metalloprotease, C-terminal domain--alpha/beta-Hydrolases-- 48283_46689_ 48283_46689_ B_3 3_2_1 3 B_220 E_14 --A_246 B_4125 E_4002 -- 52172_99999 endc NOTPDB CPL FIS-like--Homeodomain-like-- 55811_53335_ 55811_53335_ B_2 3_2_1 2 A_61 B_850 E_338 --A_733 B_3918 E_2070 -- 50465_99999 endc NOTPDB CPL Nudix--S-adenosyl-L-methionine-dependent methyltransferases-- 81296_48208_ 81296_48208_ B_13 6_4_2 13 A_40 B_404 E_1207 --A_67 B_360 E_274 -- endn_49785_54909_99999 63446_endc INPDB CPL E set domains--Six-hairpin glycosyltransferases-- 50203_54523_ 50203_54523_ B_2 3_1_2 2 A_24 B_163 E_47 --B_445 E_11 -- endn endc_99999 NOTPDB CPL Bacterial enterotoxins--Pilin-- 56784_51735_ 56784_51735_ B_2 3_1_2 2 A_230 B_1745 E_1267 --A_993 B_8798 E_3827 -- endn endc_99999 NOTPDB CPL HAD-like--NAD(P)-binding Rossmann-fold domains-- 51445_56988_ 51445_56988_ B_8 3_2_1 8 A_89 B_1646 E_1474 --B_20 E_4 -- endn_49303 endc NOTPDB CPL (Trans)glycosidases--Anthrax protective antigen-- 50249_52096_ 50249_52096_ B_5 4_2_2 5 A_390 B_2734 E_1438 --A_96 B_1208 E_331 -- endn_99999 endc_56796 NOTPDB CPL Nucleic acid-binding proteins--ClpP/crotonase-- 46689_53697_ 46689_53697_ B_7 3_2_1 7 A_246 B_4125 E_4002 --A_65 B_630 E_103 -- endn_99999 endc NOTPDB CPL Homeodomain-like--SIS domain-- 51445_51120_ 51445_51120_ B_2 3_2_1 2 A_89 B_1646 E_1474 --B_123 E_18 -- endn_99999 endc NOTPDB CPL (Trans)glycosidases--Serralysin-like metalloprotease, C-terminal domain-- 48576_52540_ 48576_52540_ B_3 4_2_2 3 A_32 B_270 E_227 --A_2129 B_14320 E_12913 -- 52540_99999 endc_99999 NOTPDB CPL Terpenoid synthases--P-loop containing nucleotide triphosphate hydrolases-- 55486_48452_ 55486_48452_ B_9 4_3_1 9 A_64 B_735 E_1617 --A_146 B_1937 E_3442 -- endn_49611_99999 endc NOTPDB CPL Metalloproteases ("zincins"), catalytic domain--TPR-like-- 55846_69318_ 55846_69318_ B_2 3_2_1 2 B_142 E_52 --A_6 B_79 E_181 -- 53955_99999 endc NOTPDB CPL N-acetylmuramoyl-L-alanine amidase-like--Integrin alpha N-terminal domain-- 51905_48179_ 51905_48179_ B_2 3_2_1 2 A_358 B_2910 E_1243 --A_71 B_674 E_226 -- endn_48179 endc NOTPDB CPL FAD/NAD(P)-binding domain--6-phosphogluconate dehydrogenase C-terminal domain-like-- 55785_81606_ 55785_81606_ B_3 6_3_3 3 A_168 B_1284 E_394 --A_2 B_180 E_410 -- 47380_endn_99999 55781_endc_55785 NOTPDB CPL PYP-like sensor domain (PAS domain)--Protein serine/threonine phosphatase 2C, catalytic domain-- 51735_52343_ 51735_52343_ B_2 3_1_2 2 A_993 B_8798 E_3827 --A_34 B_384 E_315 -- endn 51735_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Ferredoxin reductase-like, C-terminal NADP-linked domain-- 56954_50998_ 56954_50998_ B_7 3_2_1 7 B_451 E_40 --A_73 B_392 E_284 -- 51230_endn endc NOTPDB CPL Integral outer membrane protein TolC, efflux pump component--Quinoprotein alcohol dehydrogenase-like-- 48452_55486_ 48452_55486_ B_2 4_2_2 2 A_146 B_1937 E_3442 --A_64 B_735 E_1617 -- endn_99999 99999_55486 NOTPDB CPL TPR-like--Metalloproteases ("zincins"), catalytic domain-- 47413_46785_ 47413_46785_ B_7 3_1_2 7 A_123 B_1973 E_199 --A_1241 B_7979 E_2143 -- endn endc_99999 NOTPDB CPL lambda repressor-like DNA-binding domains--"Winged helix" DNA-binding domain-- 56349_53098_ 56349_53098_ B_2 3_2_1 2 A_59 B_801 E_85 --A_290 B_2494 E_2335 -- endn_99999 endc NOTPDB CPL DNA breaking-rejoining enzymes--Ribonuclease H-like-- 51395_48619_ 51395_48619_ B_2 4_2_2 2 A_111 B_849 E_252 --B_72 E_158 -- endn_99999 55073_99999 NOTPDB CPL FMN-linked oxidoreductases--Phospholipase A2, PLA2-- 51366_56014_ 51366_56014_ B_24 4_3_1 24 A_289 B_986 E_160 --A_25 B_194 E_20 -- endn_51604_99999 endc NOTPDB CPL Ribulose-phoshate binding barrel--Sulfite reductase hemoprotein (SiRHP), domains 2 and 4-- 49373_51126_ 49373_51126_ B_2 3_2_1 2 A_20 B_171 E_29 --A_116 B_481 E_444 -- endn_99999 endc NOTPDB CPL Invasin/intimin cell-adhesion fragments--Pectin lyase-like-- 51726_51726_ 51726_51726_ B_6 4_2_2 6 A_52 B_158 E_35 --A_52 B_158 E_35 -- endn_47473 endc_99999 NOTPDB RPT Uroporphyrinogen decarboxylase, UROD--Uroporphyrinogen decarboxylase, UROD-- 46785_52172_ 46785_52172_ B_2 3_2_1 2 A_1241 B_7979 E_2143 --A_85 B_3166 E_241 -- endn_54826 endc NOTPDB CPL "Winged helix" DNA-binding domain--CheY-like-- 54593_55729_ 54593_55729_ B_2 3_1_2 2 A_36 B_950 E_142 --A_217 B_2438 E_800 -- endn endc_55729 NOTPDB CPL Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase--Acyl-CoA N-acyltransferases (Nat)-- 49879_52172_ 49879_52172_ B_2 3_1_2 2 A_4 B_172 E_486 --A_85 B_3166 E_241 -- endn endc_99999 NOTPDB CPL SMAD/FHA domain--CheY-like-- 46785_63600_ 46785_63600_ B_2 3_1_2 2 A_1241 B_7979 E_2143 --B_3 E_13 -- endn endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Telomeric repeat binding factor (TRF) dimerisation domain-- 69304_50998_ 69304_50998_ B_2 4_2_2 2 A_4 B_18 E_43 --A_73 B_392 E_284 -- endn_49611 47384_55874 NOTPDB CPL Tricorn protease N-terminal domain--Quinoprotein alcohol dehydrogenase-like-- 52172_47413_ 52172_47413_ B_2 3_1_2 2 A_85 B_3166 E_241 --A_123 B_1973 E_199 -- endn endc_46689 NOTPDB CPL CheY-like--lambda repressor-like DNA-binding domains-- 56784_55729_ 56784_55729_ B_2 3_2_1 2 A_230 B_1745 E_1267 --A_217 B_2438 E_800 -- endn_99999 endc NOTPDB CPL HAD-like--Acyl-CoA N-acyltransferases (Nat)-- 55874_55785_ 55874_55785_ B_4 5_3_2 4 A_178 B_2970 E_398 --A_168 B_1284 E_394 -- endn_47384_99999 55781_endc NOTPDB CPL ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase--PYP-like sensor domain (PAS domain)-- 54806_50494_ 54806_50494_ B_10 5_2_3 10 A_2 B_14 E_3 --A_19 B_482 E_1600 -- 54806_99999 51055_endc_99999 NOTPDB CPL Alpha-lytic protease prodomain--Trypsin-like serine proteases-- 49611_55486_ 49611_55486_ B_4 3_1_2 4 A_18 B_143 E_192 --A_64 B_735 E_1617 -- endn 48452_endc NOTPDB CPL Viral coat and capsid proteins--Metalloproteases ("zincins"), catalytic domain-- 52540_54334_ 52540_54334_ B_2 4_2_2 2 A_2129 B_14320 E_12913 --A_3 B_50 E_36 -- endn_54334 52540_endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Superantigen toxins, C-terminal domain-- 52794_55804_ 52794_55804_ B_27 3_2_1 27 B_191 E_4 --A_2 B_304 E_123 -- 63520_99999 endc NOTPDB CPL Enzyme IIB-cellobiose--Phoshotransferase/anion transport protein-- C 976 47676_46942_ 47676_46942_ E_34 4_1_3 34 A_5 B_42 E_128 --E_79 -- endn 57783_endc_99999 NOTPDB CPL Conserved domain common to transcription factors TFIIS, elongin A, CRSP70--Elongation factor TFIIS domain 2-- 49562_56024_ 49562_56024_ E_4 4_2_2 4 B_12 E_1627 --A_32 B_314 E_180 -- endn_99999 endc_99999 NOTPDB CPL C2 domain (Calcium/lipid-binding domain, CaLB)--Phospholipase D/nuclease-- 51011_82895_ 51011_82895_ E_10 4_2_2 10 A_17 B_377 E_212 --E_618 -- 57603_99999 57802_99999 NOTPDB CPL alpha-Amylases, C-terminal beta-sheet domain--TSP-1 type 1 repeat-- 47686_57196_ 47686_57196_ E_7 5_3_2 7 E_41 --A_2 B_7 E_2358 -- 47686_endn_99999 57196_57184 NOTPDB CPL Anaphylotoxins (complement system)--EGF/Laminin-- 57667_48726_ 57667_48726_ E_28 5_3_2 28 A_23 B_24 E_4849 --A_14 B_78 E_4071 -- endn_57667_99999 57667_endc NOTPDB CPL C2H2 and C2HC zinc fingers--Immunoglobulin-- 55753_55753_ 55753_55753_ E_99 6_3_3 99 A_1 B_17 E_251 --A_1 B_17 E_251 -- endn_55753_99999 endc_99999_55753 INPDB RPT Actin depolymerizing proteins--Actin depolymerizing proteins-- 53187_56629_ 53187_56629_ E_2 4_2_2 2 A_105 B_1042 E_648 --B_2 E_12 -- 54897_99999 endc_99999 NOTPDB CPL Zn-dependent exopeptidases--ADP ribosyl cyclase-like-- 53474_53098_ 53474_53098_ E_2 4_2_2 2 A_141 B_2949 E_2909 --A_290 B_2494 E_2335 -- endn_53474 endc_99999 NOTPDB CPL alpha/beta-Hydrolases--Ribonuclease H-like-- 57850_57845_ 57850_57845_ E_216 10_6_4 216 A_19 B_52 E_3605 --E_367 -- endn_57756_48371_57850_49265_99999 46966_endc_47240_99999 NOTPDB CPL RING finger domain, C3HC4--B-box zinc-binding domain-- 53300_52540_ 53300_52540_ E_5 5_2_3 5 A_51 B_345 E_996 --A_2129 B_14320 E_12913 -- endn_99999 52540_endc_99999 NOTPDB CPL vWA-like--P-loop containing nucleotide triphosphate hydrolases-- 81383_81901_ 81383_81901_ E_14 4_2_2 14 B_8 E_2068 --B_153 E_123 -- endn_99999 endc_99999 NOTPDB CPL F-box domain--Cysteine rich protein B (HcpB)-- 48452_52833_ 48452_52833_ E_5 3_2_1 5 A_146 B_1937 E_3442 --A_220 B_2517 E_2068 -- 48452_99999 endc NOTPDB CPL TPR-like--Thioredoxin-like-- 69179_57196_ 69179_57196_ E_31 4_2_2 31 A_2 B_11 E_172 --A_2 B_7 E_2358 -- endn_53300 57196_99999 INPDB CPL Integrin domains--EGF/Laminin-- 48403_48371_ 48403_48371_ E_2 4_2_2 2 A_4 B_168 E_2348 --A_73 B_255 E_3951 -- endn_99999 48371_99999 NOTPDB CPL Ankyrin repeat--ARM repeat-- 46966_75399_ 46966_75399_ E_2 4_2_2 2 A_7 B_30 E_584 --B_2 E_52 -- 46966_endn 75399_99999 NOTPDB CPL Spectrin repeat--Plakin repeat-- 55797_57196_ 55797_57196_ E_3 3_1_2 3 A_2 B_67 E_342 --A_2 B_7 E_2358 -- endn 56436_99999 NOTPDB CPL PR-1-like--EGF/Laminin-- 49562_47473_ 49562_47473_ E_5 4_2_2 5 B_12 E_1627 --A_51 B_190 E_2808 -- endn_99999 endc_99999 NOTPDB CPL C2 domain (Calcium/lipid-binding domain, CaLB)--EF-hand-- 50965_56300_ 50965_56300_ E_2 3_2_1 2 A_4 B_35 E_898 --A_170 B_837 E_750 -- endn_99999 endc NOTPDB CPL Galactose oxidase, central domain--Metallo-dependent phosphatases-- 57184_57184_ 57184_57184_ E_79 12_6_6 79 B_4 E_859 --B_4 E_859 -- 82153_57196_endn_52058_57184_99999 57196_57184_57581_endc_56112_99999 NOTPDB RPT Growth factor receptor domain--Growth factor receptor domain-- 54928_54928_ 54928_54928_ E_1269 20_10_10 1269 A_6 B_60 E_3471 --A_6 B_60 E_3471 -- 54719_endn_48371_53098_54928_54427_48208_55120_53316_99999 52540_54928_51045_54791_54768_57756_56601_endc_63570_99999 INPDB RPT RNA-binding domain, RBD--RNA-binding domain, RBD-- 54928_54768_ 54928_54768_ E_4 4_2_2 4 A_6 B_60 E_3471 --A_18 B_198 E_397 -- 54928_endn endc_99999 NOTPDB CPL RNA-binding domain, RBD--dsRNA-binding domain-like-- 57850_48371_ 57850_48371_ E_37 4_2_2 37 A_19 B_52 E_3605 --A_73 B_255 E_3951 -- endn_99999 endc_99999 NOTPDB CPL RING finger domain, C3HC4--ARM repeat-- 49899_57196_ 49899_57196_ E_108 14_8_6 108 A_22 B_208 E_1314 --A_2 B_7 E_2358 -- endn_49899_57362_57196_49785_48726_56496_99999 57196_49899_57184_endc_56496_99999 NOTPDB CPL Concanavalin A-like lectins/glucanases--EGF/Laminin-- 47923_47923_ 47923_47923_ E_380 10_3_7 380 A_1 B_2 E_469 --A_1 B_2 E_469 -- endn_56112_99999 50978_49842_50729_47473_endc_52821_99999 INPDB RPT Ypt/Rab-GAP domain of gyp1p--Ypt/Rab-GAP domain of gyp1p-- 81338_55856_ 81338_55856_ E_5 3_1_2 5 A_5 B_113 E_245 --A_5 B_20 E_198 -- endn endc_99999 NOTPDB CPL Aquaporin-like--Cytochrome b5-- 69012_55874_ 69012_55874_ E_19 4_2_2 19 A_2 E_42 --A_178 B_2970 E_398 -- endn_99999 endc_99999 INPDB CPL alpha-ketoacid dehydrogenase kinase, N-terminal domain--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 50630_46934_ 50630_46934_ E_9 3_2_1 9 A_15 B_69 E_1046 --A_21 B_114 E_420 -- endn_54236 endc NOTPDB CPL Acid proteases--UBA-like-- 50729_48371_ 50729_48371_ E_12 5_3_2 12 A_14 B_44 E_3057 --A_73 B_255 E_3951 -- endn_55315_99999 endc_99999 NOTPDB CPL PH domain-like--ARM repeat-- 54695_54695_ 54695_54695_ E_89 12_7_5 89 B_6 E_2078 --B_6 E_2078 -- 52540_50985_endn_49599_48403_50965_99999 52540_endc_50965_47240_99999 NOTPDB RPT POZ domain--POZ domain-- 56112_48726_ 56112_48726_ E_27 5_3_2 27 A_114 B_971 E_9319 --A_14 B_78 E_4071 -- endn_99999_49265 48726_endc INPDB CPL Protein kinase-like (PK-like)--Immunoglobulin-- 48371_50978_ 48371_50978_ E_7 4_2_2 7 A_73 B_255 E_3951 --A_7 B_101 E_3576 -- endn_99999 endc_99999 NOTPDB CPL ARM repeat--WD40-repeat-- 57903_47370_ 57903_47370_ E_40 7_4_3 40 A_56 B_38 E_1435 --A_3 B_4 E_452 -- endn_57903_63763_99999 endc_99999_63748 NOTPDB CPL FYVE/PHD zinc finger--Bromodomain-- 54511_57196_ 54511_57196_ E_5 5_3_2 5 B_3 E_22 --A_2 B_7 E_2358 -- 57196_48726_99999 57059_57196 NOTPDB CPL GFP-like--EGF/Laminin-- 54695_50965_ 54695_50965_ E_69 5_3_2 69 B_6 E_2078 --A_4 B_35 E_898 -- endn_54695_99999 56276_endc NOTPDB CPL POZ domain--Galactose oxidase, central domain-- 52047_53795_ 52047_53795_ E_3 5_3_2 3 A_9 B_93 E_2576 --A_421 B_3843 E_485 -- 52047_52540_endn endc_99999 NOTPDB CPL RNI-like--PEP carboxykinase-like-- 57196_57196_ 57196_57196_ E_1157 62_32_30 1157 A_2 B_7 E_2358 --A_2 B_7 E_2358 -- 50969_57424_56436_endn_49899_57362_57095_57184_53597_53300_57630_50370_49265_57535_50630_52047_57196_82671_52799_48726_57467_57581_47686_54511_69179_49854_82895_57302_82153_50939_57501_99999 57440_50969_57610_56436_69687_49899_63825_57184_53300_69304_49265_50370_63829_57535_57196_69322_82671_48726_57467_57581_57567_56112_50494_53613_51735_57016_endc_49785_50965_99999 INPDB RPT EGF/Laminin--EGF/Laminin-- 52087_48726_ 52087_48726_ E_2 4_2_2 2 B_5 E_404 --A_14 B_78 E_4071 -- 46938_99999 endc_81301 NOTPDB CPL C-terminal domain of phosphatidylinositol transfer protein sec14p--Immunoglobulin-- 53474_81383_ 53474_81383_ E_2 3_1_2 2 A_141 B_2949 E_2909 --B_8 E_2068 -- endn endc_99999 NOTPDB CPL alpha/beta-Hydrolases--F-box domain-- 48403_47986_ 48403_47986_ E_6 3_2_1 6 A_4 B_168 E_2348 --A_8 B_32 E_410 -- endn_99999 endc NOTPDB CPL Ankyrin repeat--DEATH domain-- 49785_57535_ 49785_57535_ E_4 3_1_2 4 A_10 B_366 E_724 --B_3 E_582 -- endn 57586_99999 NOTPDB CPL Galactose-binding domain-like--Complement control module/SCR domain-- 52047_48371_ 52047_48371_ E_25 6_3_3 25 A_9 B_93 E_2576 --A_73 B_255 E_3951 -- 81383_endn_99999 48371_endc_99999 NOTPDB CPL RNI-like--ARM repeat-- 48340_52540_ 48340_52540_ E_3 3_2_1 3 A_1 B_3 E_80 --A_2129 B_14320 E_12913 -- 52540_99999 endc NOTPDB CPL Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain--P-loop containing nucleotide triphosphate hydrolases-- 46565_81514_ 46565_81514_ E_2 3_2_1 2 A_12 B_326 E_827 --E_19 -- endn_99999 endc NOTPDB CPL Chaperone J-domain--Subunit X (nonheme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)-- 51445_57180_ 51445_57180_ E_2 3_1_2 2 A_89 B_1646 E_1474 --E_22 -- endn endc_99999 NOTPDB CPL (Trans)glycosidases--Cellulose-binding domain-- 47380_57667_ 47380_57667_ E_6 4_2_2 6 A_1 B_2 E_16 --A_23 B_24 E_4849 -- 57667_99999 57667_99999 NOTPDB CPL ROP protein--C2H2 and C2HC zinc fingers-- 49854_69848_ 49854_69848_ E_16 5_2_3 16 B_1 E_636 --E_59 -- endn_99999 49785_endc_99999 NOTPDB CPL Spermadhesin, CUB domain--LCCL domain-- 57850_57783_ 57850_57783_ E_2 4_2_2 2 A_19 B_52 E_3605 --A_193 B_620 E_393 -- endn_48403 57667_57783 NOTPDB CPL RING finger domain, C3HC4--Zinc beta-ribbon-- 55550_52799_ 55550_52799_ E_24 5_2_3 24 A_4 B_15 E_910 --A_16 B_112 E_1201 -- endn_55550 55387_endc_99999 INPDB CPL SH2 domain--(Phosphotyrosine protein) phosphatases II-- 57903_54160_ 57903_54160_ E_13 5_3_2 13 A_56 B_38 E_1435 --A_7 B_11 E_374 -- endn_57903_99999 54160_99999 NOTPDB CPL FYVE/PHD zinc finger--Chromo domain-like-- 49854_53300_ 49854_53300_ E_5 5_3_2 5 B_1 E_636 --A_51 B_345 E_996 -- endn_49854_99999 endc_99999 NOTPDB CPL Spermadhesin, CUB domain--vWA-like-- 51045_51045_ 51045_51045_ E_154 10_4_6 154 B_5 E_413 --B_5 E_413 -- 52540_51045_endn_99999 51045_56204_50156_endc_51735_99999 INPDB RPT WW domain--WW domain-- 49854_49854_ 49854_49854_ E_176 23_11_12 176 B_1 E_636 --B_1 E_636 -- 56436_57424_endn_50494_49854_57535_55486_57196_82671_56487_99999 50242_57440_57424_50494_endc_49854_57535_82895_57196_49785_56487_99999 NOTPDB RPT Spermadhesin, CUB domain--Spermadhesin, CUB domain-- 52512_51735_ 52512_51735_ E_2 3_1_2 2 A_33 B_474 E_94 --A_993 B_8798 E_3827 -- endn endc_99999 NOTPDB CPL Phosphosugar isomerase--NAD(P)-binding Rossmann-fold domains-- 50249_57756_ 50249_57756_ E_23 4_1_3 23 A_390 B_2734 E_1438 --A_11 B_19 E_1238 -- endn 57756_endc_99999 NOTPDB CPL Nucleic acid-binding proteins--Retrovirus zinc finger-like domains-- 57424_57567_ 57424_57567_ E_3 4_2_2 3 E_497 --E_254 -- 57424_99999 57196_99999 NOTPDB CPL LDL receptor-like module--Serine proterase inhibitors-- 50939_57196_ 50939_57196_ E_6 4_2_2 6 A_3 B_134 E_129 --A_2 B_7 E_2358 -- endn_99999 57196_99999 NOTPDB CPL Sialidases (neuraminidases)--EGF/Laminin-- 46565_52540_ 46565_52540_ E_2 3_2_1 2 A_12 B_326 E_827 --A_2129 B_14320 E_12913 -- endn_99999 endc NOTPDB CPL Chaperone J-domain--P-loop containing nucleotide triphosphate hydrolases-- 48317_56112_ 48317_56112_ E_3 3_1_2 3 A_21 B_264 E_225 --A_114 B_971 E_9319 -- endn endc_55073 NOTPDB CPL Acid phosphatase/Vanadium-dependent haloperoxidase--Protein kinase-like (PK-like)-- 81383_50978_ 81383_50978_ E_70 6_2_4 70 B_8 E_2068 --A_7 B_101 E_3576 -- endn_99999 57059_50969_endc_99999 INPDB CPL F-box domain--WD40-repeat-- 47986_47986_ 47986_47986_ E_34 6_2_4 34 A_8 B_32 E_410 --A_8 B_32 E_410 -- endn_99999 52540_52129_endc_99999 NOTPDB RPT DEATH domain--DEATH domain-- 53300_56436_ 53300_56436_ E_37 6_3_3 37 A_51 B_345 E_996 --A_2 B_62 E_1409 -- endn_53300_99999 56436_endc_99999 NOTPDB CPL vWA-like--C-type lectin-like-- 54001_56672_ 54001_56672_ E_3 6_3_3 3 A_60 B_262 E_1838 --A_66 B_378 E_3164 -- 50630_endn_99999 endc_99999_53098 NOTPDB CPL Cysteine proteinases--DNA/RNA polymerases-- 49313_49899_ 49313_49899_ E_20 4_2_2 20 A_3 B_17 E_754 --A_22 B_208 E_1314 -- 49313_99999 49899_99999 NOTPDB CPL Cadherin--Concanavalin A-like lectins/glucanases-- 47459_47459_ 47459_47459_ E_5 5_3_2 5 A_3 B_10 E_1147 --A_3 B_10 E_1147 -- endn_48081_99999 endc_99999 NOTPDB RPT Helix-loop-helix DNA-binding domain--Helix-loop-helix DNA-binding domain-- 46689_56672_ 46689_56672_ E_2 4_2_2 2 A_246 B_4125 E_4002 --A_66 B_378 E_3164 -- 50630_endn endc_53098 NOTPDB CPL Homeodomain-like--DNA/RNA polymerases-- 56366_49879_ 56366_49879_ E_13 3_2_1 13 E_91 --A_4 B_172 E_486 -- endn_99999 endc NOTPDB CPL SMAD MH1 domain--SMAD/FHA domain-- 52922_48452_ 52922_48452_ E_2 3_2_1 2 A_105 B_497 E_111 --A_146 B_1937 E_3442 -- endn_99999 endc NOTPDB CPL TK C-terminal domain-like--TPR-like-- 57581_57196_ 57581_57196_ E_51 7_4_3 51 B_2 E_61 --A_2 B_7 E_2358 -- 57196_endn_57184_99999 57196_57581_99999 NOTPDB CPL TB module/8-cys domain--EGF/Laminin-- 52058_49764_ 52058_49764_ E_2 3_1_2 2 A_6 B_143 E_2568 --A_44 B_138 E_388 -- endn endc_99999 NOTPDB CPL L domain-like--HSP20-like chaperones-- 57667_57903_ 57667_57903_ E_15 6_3_3 15 A_23 B_24 E_4849 --A_56 B_38 E_1435 -- endn_57667_99999 57667_57903_99999 NOTPDB CPL C2H2 and C2HC zinc fingers--FYVE/PHD zinc finger-- 82708_52540_ 82708_52540_ E_7 6_2_4 7 B_37 E_68 --A_2129 B_14320 E_12913 -- endn_99999 52540_48403_endc_99999 NOTPDB CPL R3H domain--P-loop containing nucleotide triphosphate hydrolases-- 47370_63748_ 47370_63748_ E_19 5_3_2 19 A_3 B_4 E_452 --A_4 B_5 E_441 -- endn_57903_48695 endc_99999 NOTPDB CPL Bromodomain--Tudor/PWWP-- 57535_57535_ 57535_57535_ E_344 22_15_7 344 B_3 E_582 --B_3 E_582 -- 57059_57424_56436_endn_57256_57184_53300_49854_50104_82895_57535_57196_57302_48726_99999 57196_53822_50494_53300_endc_99999_57535 INPDB RPT Complement control module/SCR domain--Complement control module/SCR domain-- 51004_48452_ 51004_48452_ E_6 4_2_2 6 A_2 B_13 E_266 --A_146 B_1937 E_3442 -- endn_99999 48452_99999 NOTPDB CPL C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase--TPR-like-- 52087_46966_ 52087_46966_ E_20 3_1_2 20 B_5 E_404 --A_7 B_30 E_584 -- endn 46966_99999 NOTPDB CPL C-terminal domain of phosphatidylinositol transfer protein sec14p--Spectrin repeat-- 52058_54427_ 52058_54427_ E_8 4_2_2 8 A_6 B_143 E_2568 --A_11 B_446 E_248 -- 54928_endn 46934_endc NOTPDB CPL L domain-like--NTF2-like-- 52047_57196_ 52047_57196_ E_3 5_2_3 3 A_9 B_93 E_2576 --A_2 B_7 E_2358 -- 52047_endn 57196_endc_99999 NOTPDB CPL RNI-like--EGF/Laminin-- 50952_57196_ 50952_57196_ E_5 4_2_2 5 A_7 B_167 E_70 --A_2 B_7 E_2358 -- endn_99999 endc_63829 NOTPDB CPL Soluble quinoprotein glucose dehydrogenase--EGF/Laminin-- 52058_52075_ 52058_52075_ E_11 9_2_7 11 A_6 B_143 E_2568 --B_3 E_104 -- 52047_99999 52047_81321_52058_51735_endc_56112_99999 NOTPDB CPL L domain-like--Outer arm dynein light chain 1-- 57440_57440_ 57440_57440_ E_72 14_9_5 72 A_6 B_6 E_228 --A_6 B_6 E_228 -- 57440_endn_57603_57630_49854_82895_55486_99999_57414 57440_57603_50494_endc_99999 INPDB RPT Kringle-like--Kringle-like-- 57903_57667_ 57903_57667_ E_29 7_5_2 29 A_56 B_38 E_1435 --A_23 B_24 E_4849 -- endn_57667_57903_57850_99999 57667_99999 NOTPDB CPL FYVE/PHD zinc finger--C2H2 and C2HC zinc fingers-- 50985_54695_ 50985_54695_ E_15 5_3_2 15 B_15 E_285 --B_6 E_2078 -- 50985_endn_48403 54695_99999 NOTPDB CPL RCC1/BLIP-II--POZ domain-- 57196_49785_ 57196_49785_ E_19 7_3_4 19 A_2 B_7 E_2358 --A_10 B_366 E_724 -- 57196_endn_57535 57196_49785_endc_99999 NOTPDB CPL EGF/Laminin--Galactose-binding domain-like-- 57716_57850_ 57716_57850_ E_4 4_2_2 4 A_72 B_426 E_2067 --A_19 B_52 E_3605 -- endn_57716 57716_99999 NOTPDB CPL Glucocorticoid receptor-like (DNA-binding domain)--RING finger domain, C3HC4-- 57889_57850_ 57889_57850_ E_3 5_2_3 3 A_7 B_6 E_663 --A_19 B_52 E_3605 -- endn_99999 endc_57889_99999 NOTPDB CPL Cysteine-rich domain--RING finger domain, C3HC4-- 50630_56672_ 50630_56672_ E_203 15_8_7 203 A_15 B_69 E_1046 --A_66 B_378 E_3164 -- 46966_endn_57756_47027_57774_50630_51283_99999 81296_56219_46919_56672_endc_53098_99999 NOTPDB CPL Acid proteases--DNA/RNA polymerases-- 49854_56487_ 49854_56487_ E_7 7_4_3 7 B_1 E_636 --B_1 E_193 -- endn_56487_49854_99999 50494_56487_49854 NOTPDB CPL Spermadhesin, CUB domain--Scavenger receptor cysteine-rich (SRCR) domain-- 49265_56436_ 49265_56436_ E_3 4_2_2 3 A_23 B_135 E_1734 --A_2 B_62 E_1409 -- endn_56436 56436_48726 NOTPDB CPL Fibronectin type III--C-type lectin-like-- 57586_57586_ 57586_57586_ E_110 10_5_5 110 A_15 B_23 E_359 --A_15 B_23 E_359 -- endn_57586_49785_57184_99999 56436_57586_endc_49265_99999 INPDB RPT TNF receptor-like--TNF receptor-like-- 57889_56112_ 57889_56112_ E_6 5_3_2 6 A_7 B_6 E_663 --A_114 B_971 E_9319 -- endn_57889_99999 endc_99999 NOTPDB CPL Cysteine-rich domain--Protein kinase-like (PK-like)-- 53098_52047_ 53098_52047_ E_2 4_2_2 2 A_290 B_2494 E_2335 --A_9 B_93 E_2576 -- 56672_53098 52058_endc NOTPDB CPL Ribonuclease H-like--RNI-like-- 47769_52200_ 47769_52200_ E_13 4_2_2 13 A_6 B_20 E_633 --A_2 B_41 E_302 -- 47769_48371 endc_99999 NOTPDB CPL SAM/Pointed domain--Toll/Interleukin receptor TIR domain-- 57586_56436_ 57586_56436_ E_5 4_2_2 5 A_15 B_23 E_359 --A_2 B_62 E_1409 -- endn_57586 endc_99999 NOTPDB CPL TNF receptor-like--C-type lectin-like-- 52047_81321_ 52047_81321_ E_18 5_3_2 18 A_9 B_93 E_2576 --A_7 B_20 E_8234 -- 57424_endn_52058 endc_99999 NOTPDB CPL RNI-like--Family A G protein-coupled receptor-like-- 81383_48726_ 81383_48726_ E_2 3_1_2 2 B_8 E_2068 --A_14 B_78 E_4071 -- endn endc_99999 NOTPDB CPL F-box domain--Immunoglobulin-- 81995_81811_ 81995_81811_ E_38 4_2_2 38 A_1 B_2 E_111 --B_2 E_94 -- endn_53300 82754_endc INPDB CPL beta-sandwich domain of Sec23/24--Helical domain of Sec23/24-- 51604_55040_ 51604_55040_ E_3 3_2_1 3 A_64 B_382 E_137 --A_17 B_64 E_20 -- 53167_99999 endc NOTPDB CPL Enolase C-terminal domain-like--Molybdenum cofactor biosynthesis protein C, MoaC-- 82153_57184_ 82153_57184_ E_3 4_2_2 3 A_4 B_33 E_126 --B_4 E_859 -- endn_99999 57196_99999 NOTPDB CPL FAS1 domain--Growth factor receptor domain-- 48403_50985_ 48403_50985_ E_12 4_1_3 12 A_4 B_168 E_2348 --B_15 E_285 -- endn 50985_54695_99999 NOTPDB CPL Ankyrin repeat--RCC1/BLIP-II-- 57716_48508_ 57716_48508_ E_576 11_6_5 576 A_72 B_426 E_2067 --A_1 B_10 E_1172 -- endn_57716_49899_48508_82199_99999 81321_57716_48508_endc_99999 NOTPDB CPL Glucocorticoid receptor-like (DNA-binding domain)--Nuclear receptor ligand-binding domain-- 57667_51569_ 57667_51569_ E_2 3_1_2 2 A_23 B_24 E_4849 --A_136 B_1089 E_356 -- endn 57667_endc NOTPDB CPL C2H2 and C2HC zinc fingers--Aldolase-- 52540_50978_ 52540_50978_ E_2 3_1_2 2 A_2129 B_14320 E_12913 --A_7 B_101 E_3576 -- endn endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--WD40-repeat-- 47203_47203_ 47203_47203_ E_77 5_3_2 77 A_62 B_573 E_243 --A_62 B_573 E_243 -- 56645_endn_99999 endc_99999 INPDB RPT Acyl-CoA dehydrogenase C-terminal domain-like--Acyl-CoA dehydrogenase C-terminal domain-like-- 57184_82895_ 57184_82895_ E_16 4_2_2 16 B_4 E_859 --E_618 -- endn_99999 endc_99999 NOTPDB CPL Growth factor receptor domain--TSP-1 type 1 repeat-- 64501_48726_ 64501_48726_ E_5 4_2_2 5 A_3 B_31 E_63 --A_14 B_78 E_4071 -- endn_48726 48726_99999 NOTPDB CPL Ku heterodimer subunits--Immunoglobulin-- 63825_57196_ 63825_57196_ E_62 11_3_8 62 A_7 B_35 E_205 --A_2 B_7 E_2358 -- 57196_57440_endn 50969_57424_50978_63825_57184_endc_57196_99999 INPDB CPL Low density lipoprotein (LDL) receptor YWTD domain--EGF/Laminin-- 50729_47912_ 50729_47912_ E_7 6_3_3 7 A_14 B_44 E_3057 --E_91 -- endn_56235_99999 endc_47912_99999 NOTPDB CPL PH domain-like--Wiscott-Aldrich syndrome protein, WASP, C-terminal domain-- 56672_57667_ 56672_57667_ E_3 3_1_2 3 A_66 B_378 E_3164 --A_23 B_24 E_4849 -- endn 57667_99999 NOTPDB CPL DNA/RNA polymerases--C2H2 and C2HC zinc fingers-- 47473_57283_ 47473_57283_ E_6 5_2_3 6 A_51 B_190 E_2808 --E_147 -- endn_57467 46626_endc_99999 NOTPDB CPL EF-hand--PMP inhibitors-- 47565_47565_ 47565_47565_ E_15 5_2_3 15 A_2 E_133 --A_2 E_133 -- endn_99999 49472_endc_99999 NOTPDB RPT Insect pheromon/odorant-binding proteins--Insect pheromon/odorant-binding proteins-- 82199_81822_ 82199_81822_ E_29 5_2_3 29 A_2 B_29 E_692 --E_34 -- endn_99999 endc_82199_99999 INPDB CPL SET domain--RuBisCo LSMT C-terminal, substrate-binding domain-- 54897_53187_ 54897_53187_ E_87 5_2_3 87 A_10 B_72 E_302 --A_105 B_1042 E_648 -- endn_99999 56629_endc_99999 INPDB CPL Protease propeptides/inhibitors--Zn-dependent exopeptidases-- 57756_56672_ 57756_56672_ E_52 7_3_4 52 A_11 B_19 E_1238 --A_66 B_378 E_3164 -- endn_55315_99999 56349_endc_53098_99999 NOTPDB CPL Retrovirus zinc finger-like domains--DNA/RNA polymerases-- 47473_51695_ 47473_51695_ E_109 8_4_4 109 A_51 B_190 E_2808 --A_5 B_143 E_312 -- endn_50729_47473_99999 endc_49562_55550_99999 INPDB CPL EF-hand--Phosphatidylinositol-specific phospholipase C (PI-PLC)-- 50729_50985_ 50729_50985_ E_5 4_1_3 5 A_14 B_44 E_3057 --B_15 E_285 -- endn 57903_endc_99999 NOTPDB CPL PH domain-like--RCC1/BLIP-II-- 49879_81606_ 49879_81606_ E_3 3_2_1 3 A_4 B_172 E_486 --A_2 B_180 E_410 -- endn_99999 endc NOTPDB CPL SMAD/FHA domain--Protein serine/threonine phosphatase 2C, catalytic domain-- 57196_50494_ 57196_50494_ E_24 9_6_3 24 A_2 B_7 E_2358 --A_19 B_482 E_1600 -- 57196_57302_endn_57546_57630_99999 endc_99999_82895 NOTPDB CPL EGF/Laminin--Trypsin-like serine proteases-- 52058_50969_ 52058_50969_ E_4 3_1_2 4 A_6 B_143 E_2568 --A_24 B_218 E_336 -- endn endc_99999 NOTPDB CPL L domain-like--YVTN repeat-like/Quinoprotein amine dehydrogenase-- 50891_48452_ 50891_48452_ E_17 3_2_1 17 A_6 B_149 E_393 --A_146 B_1937 E_3442 -- endn_99999 endc INPDB CPL Cyclophilin (peptidylprolyl isomerase)--TPR-like-- 53822_56112_ 53822_56112_ E_12 4_2_2 12 A_49 B_1285 E_794 --A_114 B_971 E_9319 -- endn_99999 endc_55073 NOTPDB CPL Periplasmic binding protein-like I--Protein kinase-like (PK-like)-- 57414_57440_ 57414_57440_ E_12 4_2_2 12 B_5 E_136 --A_6 B_6 E_228 -- endn_99999 57440_endc INPDB CPL Hairpin loop containing domain-like--Kringle-like-- 48065_50729_ 48065_50729_ E_339 18_8_10 339 A_3 B_7 E_597 --A_14 B_44 E_3057 -- 47113_46966_endn_50494_47576_50729_50044_99999 48726_57903_50729_50044_49562_endc_46785_57889_48366_99999 INPDB CPL DBL homology domain (DH-domain)--PH domain-like-- 57863_48403_ 57863_48403_ E_54 6_3_3 54 B_10 E_253 --A_4 B_168 E_2348 -- endn_50729_99999 50729_endc_99999 INPDB CPL Pyk2-associated protein beta ARF-GAP domain--Ankyrin repeat-- 52374_63515_ 52374_63515_ E_10 3_1_2 10 A_247 B_1540 E_642 --A_2 B_17 E_55 -- endn endc_99999 NOTPDB CPL Nucleotidylyl transferase--Outer surface protein C (OspC)-- 52075_52200_ 52075_52200_ E_3 5_3_2 3 B_3 E_104 --A_2 B_41 E_302 -- 52047_57095_99999 endc_99999 NOTPDB CPL Outer arm dynein light chain 1--Toll/Interleukin receptor TIR domain-- 49899_57716_ 49899_57716_ E_3 3_1_2 3 A_22 B_208 E_1314 --A_72 B_426 E_2067 -- endn 48508_99999 NOTPDB CPL Concanavalin A-like lectins/glucanases--Glucocorticoid receptor-like (DNA-binding domain)-- 47862_68912_ 47862_68912_ E_3 3_2_1 3 A_2 E_136 --B_106 E_13 -- endn_99999 endc NOTPDB CPL Saposin--Rho termination factor, N-terminal domain-- 82895_57501_ 82895_57501_ E_7 3_2_1 7 E_618 --A_1 B_17 E_479 -- 82895_99999 endc NOTPDB CPL TSP-1 type 1 repeat--Cystine-knot cytokines-- 53187_49482_ 53187_49482_ E_4 3_2_1 4 A_105 B_1042 E_648 --A_2 B_98 E_31 -- endn_49464 endc NOTPDB CPL Zn-dependent exopeptidases--Aromatic compound dioxygenase-- 48552_48552_ 48552_48552_ E_22 6_3_3 22 B_5 E_36 --B_5 E_36 -- endn_99999_48552 endc_99999_48552 INPDB RPT Serum albumin-like--Serum albumin-like-- 56235_50729_ 56235_50729_ E_3 3_1_2 3 A_157 B_611 E_596 --A_14 B_44 E_3057 -- endn 47912_49879 NOTPDB CPL N-terminal nucleophile aminohydrolases (Ntn hydrolases)--PH domain-like-- 74924_52047_ 74924_52047_ E_8 4_1_3 8 B_2 E_135 --A_9 B_93 E_2576 -- endn 54236_endc_99999 NOTPDB CPL Cap-Gly domain--RNI-like-- 48726_82895_ 48726_82895_ E_33 6_3_3 33 A_14 B_78 E_4071 --E_618 -- endn_48726_99999 endc_82895_99999 NOTPDB CPL Immunoglobulin--TSP-1 type 1 repeat-- 47943_47353_ 47943_47353_ E_49 8_3_5 49 A_1 B_7 E_66 --A_3 B_6 E_153 -- endn_47836_99999 57756_endc_51283_53098_99999 INPDB CPL Retrovirus capsid protein, N-terminal core domain--Retrovirus capsid protein C-terminal domain-- 81296_63433_ 81296_63433_ E_2 3_1_2 2 A_40 B_404 E_1207 --B_9 E_18 -- endn endc_99999 NOTPDB CPL E set domains--Fumarylacetoacetate hydrolase, FAH, N-terminal domain-- 56741_56349_ 56741_56349_ E_25 4_2_2 25 E_33 --A_59 B_801 E_85 -- endn_99999 46596_99999 INPDB CPL Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment--DNA breaking-rejoining enzymes-- 50916_46785_ 50916_46785_ E_16 3_2_1 16 E_41 --A_1241 B_7979 E_2143 -- endn_99999 endc NOTPDB CPL Rap30/74 interaction domains--"Winged helix" DNA-binding domain-- 54236_50630_ 54236_50630_ E_13 3_1_2 13 A_18 B_81 E_1815 --A_15 B_69 E_1046 -- endn 46934_endc NOTPDB CPL Ubiquitin-like--Acid proteases-- 81321_81321_ 81321_81321_ E_77 6_3_3 77 A_7 B_20 E_8234 --A_7 B_20 E_8234 -- 81321_endn_99999 81321_endc_99999 NOTPDB RPT Family A G protein-coupled receptor-like--Family A G protein-coupled receptor-like-- 81383_52540_ 81383_52540_ E_2 3_1_2 2 B_8 E_2068 --A_2129 B_14320 E_12913 -- endn endc_99999 NOTPDB CPL F-box domain--P-loop containing nucleotide triphosphate hydrolases-- 53098_54928_ 53098_54928_ E_14 6_2_4 14 A_290 B_2494 E_2335 --A_6 B_60 E_3471 -- endn_99999 54928_endc_57802_99999 NOTPDB CPL Ribonuclease H-like--RNA-binding domain, RBD-- 74924_54001_ 74924_54001_ E_16 4_2_2 16 B_2 E_135 --A_60 B_262 E_1838 -- endn_99999 endc_99999 NOTPDB CPL Cap-Gly domain--Cysteine proteinases-- 55550_50044_ 55550_50044_ E_72 11_5_6 72 A_4 B_15 E_910 --A_2 B_84 E_1671 -- endn_50044_47473_55550_99999 64268_50729_50044_endc_55550_99999 NOTPDB CPL SH2 domain--SH3-domain-- 57903_82199_ 57903_82199_ E_23 6_3_3 23 A_56 B_38 E_1435 --A_2 B_29 E_692 -- endn_57903_99999 74914_endc_99999 NOTPDB CPL FYVE/PHD zinc finger--SET domain-- 53300_57196_ 53300_57196_ E_28 9_5_4 28 A_51 B_345 E_996 --A_2 B_7 E_2358 -- 57196_endn_53300_63748_49265 57196_endc_53300_99999 NOTPDB CPL vWA-like--EGF/Laminin-- 57184_48726_ 57184_48726_ E_6 5_2_3 6 B_4 E_859 --A_14 B_78 E_4071 -- endn_99999 56436_48726_49265 NOTPDB CPL Growth factor receptor domain--Immunoglobulin-- 49265_52058_ 49265_52058_ E_15 4_2_2 15 A_23 B_135 E_1734 --A_6 B_143 E_2568 -- endn_99999 57184_99999 NOTPDB CPL Fibronectin type III--L domain-like-- 57850_57889_ 57850_57889_ E_10 7_4_3 10 A_19 B_52 E_3605 --A_7 B_6 E_663 -- endn_57889_99999_53098 57845_57889_99999 NOTPDB CPL RING finger domain, C3HC4--Cysteine-rich domain-- 47473_54534_ 47473_54534_ E_16 4_2_2 16 A_51 B_190 E_2808 --A_32 B_599 E_266 -- endn_54534 54534_99999 NOTPDB CPL EF-hand--FKBP-like-- 57196_82671_ 57196_82671_ E_6 5_3_2 6 A_2 B_7 E_2358 --E_73 -- 57196_endn_99999 48726_99999 NOTPDB CPL EGF/Laminin--SEA domain-- 47616_53335_ 47616_53335_ E_5 3_2_1 5 A_7 B_434 E_765 --A_733 B_3918 E_2070 -- endn_99999 endc NOTPDB CPL Glutathione S-transferase (GST), C-terminal domain--S-adenosyl-L-methionine-dependent methyltransferases-- 64268_52047_ 64268_52047_ E_3 3_1_2 3 B_5 E_392 --A_9 B_93 E_2576 -- endn endc_99999 NOTPDB CPL PX domain--RNI-like-- 52540_50156_ 52540_50156_ E_3 3_1_2 3 A_2129 B_14320 E_12913 --A_28 B_534 E_1380 -- endn endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--PDZ domain-like-- 50729_57889_ 50729_57889_ E_27 6_2_4 27 A_14 B_44 E_3057 --A_7 B_6 E_663 -- endn_48065 50044_57889_55550_99999 NOTPDB CPL PH domain-like--Cysteine-rich domain-- 54928_82171_ 54928_82171_ E_16 4_2_2 16 A_6 B_60 E_3471 --A_11 B_35 E_129 -- endn_99999 endc_99999 NOTPDB CPL RNA-binding domain, RBD--Dipeptidyl peptidase IV/CD26, N-terminal domain-- 51092_51092_ 51092_51092_ E_2 3_2_1 2 E_29 --E_29 -- endn_99999 endc NOTPDB RPT Vitelline membrane outer protein-I (VMO-I)--Vitelline membrane outer protein-I (VMO-I)-- 46548_52540_ 46548_52540_ E_11 3_1_2 11 A_125 B_477 E_67 --A_2129 B_14320 E_12913 -- endn 52540_53795 NOTPDB CPL alpha-helical ferredoxin--P-loop containing nucleotide triphosphate hydrolases-- 57850_57716_ 57850_57716_ E_11 5_3_2 11 A_19 B_52 E_3605 --A_72 B_426 E_2067 -- endn_57716_99999 57716_57845 NOTPDB CPL RING finger domain, C3HC4--Glucocorticoid receptor-like (DNA-binding domain)-- 52540_49879_ 52540_49879_ E_35 5_3_2 35 A_2129 B_14320 E_12913 --A_4 B_172 E_486 -- endn_50729_99999 endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--SMAD/FHA domain-- 54928_52540_ 54928_52540_ E_5 4_2_2 5 A_6 B_60 E_3471 --A_2129 B_14320 E_12913 -- 54928_endn 52540_99999 NOTPDB CPL RNA-binding domain, RBD--P-loop containing nucleotide triphosphate hydrolases-- 47923_47473_ 47923_47473_ E_21 4_2_2 21 A_1 B_2 E_469 --A_51 B_190 E_2808 -- endn_47923 endc_99999 NOTPDB CPL Ypt/Rab-GAP domain of gyp1p--EF-hand-- 57424_63501_ 57424_63501_ E_5 4_2_2 5 E_497 --A_1 E_180 -- 57424_49854 57424_endc NOTPDB CPL LDL receptor-like module--Frizzled cystein-rich domain-- 50044_48403_ 50044_48403_ E_9 3_2_1 9 A_2 B_84 E_1671 --A_4 B_168 E_2348 -- endn_99999 endc NOTPDB CPL SH3-domain--Ankyrin repeat-- 50249_56059_ 50249_56059_ E_7 3_1_2 7 A_390 B_2734 E_1438 --A_192 B_1104 E_490 -- endn endc_99999 NOTPDB CPL Nucleic acid-binding proteins--Glutathione synthetase ATP-binding domain-like-- 50405_50405_ 50405_50405_ E_17 6_4_2 17 A_2 B_20 E_82 --A_2 B_20 E_82 -- endn_50405_50353_99999 50405_endc INPDB RPT Actin-crosslinking proteins--Actin-crosslinking proteins-- 57667_57783_ 57667_57783_ E_17 8_5_3 17 A_23 B_24 E_4849 --A_193 B_620 E_393 -- endn_57667_57783_57850_99999 57667_endc_99999 NOTPDB CPL C2H2 and C2HC zinc fingers--Zinc beta-ribbon-- 69304_50969_ 69304_50969_ E_2 4_2_2 2 A_4 B_18 E_43 --A_24 B_218 E_336 -- 57196_63825 50978_99999 NOTPDB CPL Tricorn protease N-terminal domain--YVTN repeat-like/Quinoprotein amine dehydrogenase-- 49265_57196_ 49265_57196_ E_8 4_2_2 8 A_23 B_135 E_1734 --A_2 B_7 E_2358 -- endn_49265 57196_99999 NOTPDB CPL Fibronectin type III--EGF/Laminin-- 47396_50784_ 47396_50784_ E_21 3_2_1 21 E_49 --A_1 E_52 -- endn_99999 endc INPDB CPL Transcription factor IIA (TFIIA), N-terminal domain--Transcription factor IIA (TFIIA), N-terminal domain-- 68906_53098_ 68906_53098_ E_4 4_2_2 4 A_1 B_8 E_121 --A_290 B_2494 E_2335 -- endn_99999 endc_99999 INPDB CPL SAP domain--Ribonuclease H-like-- 56112_48371_ 56112_48371_ E_64 4_2_2 64 A_114 B_971 E_9319 --A_73 B_255 E_3951 -- endn_99999 endc_99999 NOTPDB CPL Protein kinase-like (PK-like)--ARM repeat-- 47113_48065_ 47113_48065_ E_12 7_4_3 12 A_42 B_30 E_1066 --A_3 B_7 E_597 -- endn_50729_47661_99999 50729_endc_99999 NOTPDB CPL Histone-fold--DBL homology domain (DH-domain)-- 51395_54862_ 51395_54862_ E_6 3_2_1 6 A_111 B_849 E_252 --A_411 B_743 E_103 -- 51905_51971 endc NOTPDB CPL FMN-linked oxidoreductases--4Fe-4S ferredoxins-- 81872_50249_ 81872_50249_ E_8 6_3_3 8 E_12 --A_390 B_2734 E_1438 -- endn_81872_99999 81878_endc_99999 INPDB CPL BRCA2 helical domain--Nucleic acid-binding proteins-- 57016_57016_ 57016_57016_ E_7 5_3_2 7 B_1 E_48 --B_1 E_48 -- 57016_51445_99999 endc_57016 INPDB RPT Plant lectins/antimicrobial peptides--Plant lectins/antimicrobial peptides-- 48403_53335_ 48403_53335_ E_3 3_2_1 3 A_4 B_168 E_2348 --A_733 B_3918 E_2070 -- endn_99999 endc NOTPDB CPL Ankyrin repeat--S-adenosyl-L-methionine-dependent methyltransferases-- 54001_56112_ 54001_56112_ E_3 3_2_1 3 A_60 B_262 E_1838 --A_114 B_971 E_9319 -- endn_99999 endc NOTPDB CPL Cysteine proteinases--Protein kinase-like (PK-like)-- 48695_57667_ 48695_57667_ E_6 5_3_2 6 A_18 B_378 E_163 --A_23 B_24 E_4849 -- endn_57667_99999 endc_99999 NOTPDB CPL Multiheme cytochromes--C2H2 and C2HC zinc fingers-- 63501_50242_ 63501_50242_ E_29 4_2_2 29 A_1 E_180 --A_2 B_2 E_148 -- endn_99999 50242_endc NOTPDB CPL Frizzled cystein-rich domain--TIMP-like-- 52075_52047_ 52075_52047_ E_8 8_4_4 8 B_3 E_104 --A_9 B_93 E_2576 -- 52047_endn_52058_99999 52047_52058_endc_99999 NOTPDB CPL Outer arm dynein light chain 1--RNI-like-- 52087_49842_ 52087_49842_ E_9 3_2_1 9 B_5 E_404 --A_2 B_31 E_236 -- endn_46938 endc NOTPDB CPL C-terminal domain of phosphatidylinositol transfer protein sec14p--TNF-like-- 56112_52058_ 56112_52058_ E_19 3_2_1 19 A_114 B_971 E_9319 --A_6 B_143 E_2568 -- 49265_99999 endc NOTPDB CPL Protein kinase-like (PK-like)--L domain-like-- 48371_75217_ 48371_75217_ E_4 3_2_1 4 A_73 B_255 E_3951 --A_43 B_424 E_72 -- endn_99999 endc NOTPDB CPL ARM repeat--alpha/beta knot-- 47473_48726_ 47473_48726_ E_11 5_3_2 11 A_51 B_190 E_2808 --A_14 B_78 E_4071 -- 50969_endn_57467 48726_endc NOTPDB CPL EF-hand--Immunoglobulin-- 55021_56534_ 55021_56534_ E_29 5_2_3 29 A_109 B_662 E_147 --B_19 E_56 -- endn_99999 50985_endc_99999 INPDB CPL Regulatory domain in the aminoacid metabolism--Aromatic aminoacid monoxygenases, catalytic and oligomerization domains-- 56219_56672_ 56219_56672_ E_189 9_4_5 189 A_14 B_311 E_899 --A_66 B_378 E_3164 -- 46966_endn_56672_99999 56672_endc_51261_53098_99999 NOTPDB CPL DNase I-like--DNA/RNA polymerases-- 47923_52821_ 47923_52821_ E_19 4_2_2 19 A_1 B_2 E_469 --A_39 B_452 E_298 -- 47874_47923 endc_99999 NOTPDB CPL Ypt/Rab-GAP domain of gyp1p--Rhodanese/Cell cycle control phosphatase-- 57716_46689_ 57716_46689_ E_92 4_2_2 92 A_72 B_426 E_2067 --A_246 B_4125 E_4002 -- endn_57716 endc_99999 NOTPDB CPL Glucocorticoid receptor-like (DNA-binding domain)--Homeodomain-like-- 54695_50249_ 54695_50249_ E_2 3_1_2 2 B_6 E_2078 --A_390 B_2734 E_1438 -- endn 54695_endc NOTPDB CPL POZ domain--Nucleic acid-binding proteins-- 49854_49899_ 49854_49899_ E_3 4_2_2 3 B_1 E_636 --A_22 B_208 E_1314 -- endn_99999 endc_99999 NOTPDB CPL Spermadhesin, CUB domain--Concanavalin A-like lectins/glucanases-- 50729_53335_ 50729_53335_ E_6 4_1_3 6 A_14 B_44 E_3057 --A_733 B_3918 E_2070 -- endn 56235_endc_99999 NOTPDB CPL PH domain-like--S-adenosyl-L-methionine-dependent methyltransferases-- 57184_57581_ 57184_57581_ E_23 7_5_2 23 B_4 E_859 --B_2 E_61 -- 57196_endn_57184_57581_99999 57196_99999 NOTPDB CPL Growth factor receptor domain--TB module/8-cys domain-- 57903_51197_ 57903_51197_ E_21 4_2_2 21 A_56 B_38 E_1435 --A_15 B_244 E_617 -- endn_99999 endc_99999 NOTPDB CPL FYVE/PHD zinc finger--Clavaminate synthase-like-- 69645_69645_ 69645_69645_ E_19 4_2_2 19 A_1 B_4 E_44 --A_1 B_4 E_44 -- endn_99999 endc_99999 INPDB RPT Arp2/3 complex subunits--Arp2/3 complex subunits-- 81573_54791_ 81573_54791_ E_4 3_1_2 4 A_3 B_71 E_151 --A_38 B_130 E_562 -- endn endc_99999 NOTPDB CPL F1F0 ATP synthase subunit B, membrane domain--Eukaryotic type KH-domain (eKH-domain)-- 81321_56672_ 81321_56672_ E_2 3_1_2 2 A_7 B_20 E_8234 --A_66 B_378 E_3164 -- endn endc_99999 NOTPDB CPL Family A G protein-coupled receptor-like--DNA/RNA polymerases-- 46938_52087_ 46938_52087_ E_252 14_5_9 252 A_1 B_1 E_260 --B_5 E_404 -- 52087_52096_endn_55729_99999 49842_48452_endc_49749_49354_52799_48726_46938_99999 INPDB CPL N-terminal domain of phosphatidylinositol transfer protein sec14p--C-terminal domain of phosphatidylinositol transfer protein sec14p-- 52047_53335_ 52047_53335_ E_4 3_1_2 4 A_9 B_93 E_2576 --A_733 B_3918 E_2070 -- endn 81301_99999 NOTPDB CPL RNI-like--S-adenosyl-L-methionine-dependent methyltransferases-- 52029_54849_ 52029_54849_ E_2 4_2_2 2 A_38 B_142 E_269 --A_39 B_132 E_217 -- endn_48592 endc_99999 NOTPDB CPL GroEL apical domain-like--GroEL-intermediate domain like-- 57567_57567_ 57567_57567_ E_61 11_5_6 61 E_254 --E_254 -- 57610_endn_82895_99999_57567 57501_endc_57283_82895_99999_57567 NOTPDB RPT Serine proterase inhibitors--Serine proterase inhibitors-- 48403_56601_ 48403_56601_ E_9 5_3_2 9 A_4 B_168 E_2348 --A_15 B_1220 E_127 -- 47986_endn_56601 endc_99999 NOTPDB CPL Ankyrin repeat--beta-Lactamase/D-ala carboxypeptidase-- 50978_55729_ 50978_55729_ E_2 4_2_2 2 A_7 B_101 E_3576 --A_217 B_2438 E_800 -- 50969_99999 50969_82171 NOTPDB CPL WD40-repeat--Acyl-CoA N-acyltransferases (Nat)-- 75632_46785_ 75632_46785_ E_119 7_4_3 119 A_1 B_1 E_144 --A_1241 B_7979 E_2143 -- 74788_endn_54236_99999 52047_endc_99999 INPDB CPL Culin homology domain--"Winged helix" DNA-binding domain-- 49764_49764_ 49764_49764_ E_6 3_1_2 6 A_44 B_138 E_388 --A_44 B_138 E_388 -- endn endc_99999 NOTPDB RPT HSP20-like chaperones--HSP20-like chaperones-- 54160_54160_ 54160_54160_ E_72 7_4_3 72 A_7 B_11 E_374 --A_7 B_11 E_374 -- endn_48403_57903_99999 52540_endc_99999 NOTPDB RPT Chromo domain-like--Chromo domain-like-- 54695_81382_ 54695_81382_ E_128 7_4_3 128 B_6 E_2078 --A_2 B_12 E_159 -- 50249_endn_53756_99999 endc_48439_99999 INPDB CPL POZ domain--Skp1 dimerisation domain-like-- 55447_54665_ 55447_54665_ E_43 4_2_2 43 A_9 B_61 E_46 --A_21 B_98 E_68 -- 56176_endn 56003_endc INPDB CPL CO dehydrogenase flavoprotein C-terminal domain-like--CO dehydrogenase molybdoprotein N-domain-like-- 57256_57256_ 57256_57256_ E_16 8_4_4 16 E_63 --E_63 -- endn_57256_57362_99999 57610_57256_endc_99999 NOTPDB RPT Elafin-like--Elafin-like-- 57610_57610_ 57610_57610_ E_13 10_5_5 13 A_1 B_1 E_118 --A_1 B_1 E_118 -- 57196_endn_57610_57184_99999 50969_57610_57362_endc_47473 NOTPDB RPT Thyroglobulin type-1 domain--Thyroglobulin type-1 domain-- 57424_57535_ 57424_57535_ E_4 5_2_3 4 E_497 --B_3 E_582 -- 57424_99999 57535_99999_49265 NOTPDB CPL LDL receptor-like module--Complement control module/SCR domain-- 49785_57184_ 49785_57184_ E_30 7_3_4 30 A_10 B_366 E_724 --B_4 E_859 -- endn_57535_99999 57586_endc_99999_49265 NOTPDB CPL Galactose-binding domain-like--Growth factor receptor domain-- 47473_46966_ 47473_46966_ E_5 4_2_2 5 A_51 B_190 E_2808 --A_7 B_30 E_584 -- endn_99999 46966_99999 NOTPDB CPL EF-hand--Spectrin repeat-- 57756_57850_ 57756_57850_ E_10 5_2_3 10 A_11 B_19 E_1238 --A_19 B_52 E_3605 -- endn_99999 57845_endc_99999 NOTPDB CPL Retrovirus zinc finger-like domains--RING finger domain, C3HC4-- 52833_54919_ 52833_54919_ E_5 4_2_2 5 A_220 B_2517 E_2068 --A_22 B_92 E_118 -- endn_56112 endc_54919 NOTPDB CPL Thioredoxin-like--Nucleoside diphosphate kinases-- 49899_56112_ 49899_56112_ E_28 7_4_3 28 A_22 B_208 E_1314 --A_114 B_971 E_9319 -- 50249_endn_99999_56112 51126_endc_99999 NOTPDB CPL Concanavalin A-like lectins/glucanases--Protein kinase-like (PK-like)-- 57756_57756_ 57756_57756_ E_64 10_5_5 64 A_11 B_19 E_1238 --A_11 B_19 E_1238 -- 50249_endn_57756_57783_99999 52540_46973_57756_endc_99999 NOTPDB RPT Retrovirus zinc finger-like domains--Retrovirus zinc finger-like domains-- 49599_49599_ 49599_49599_ E_113 9_5_4 113 A_1 E_685 --A_1 E_685 -- endn_49599_82927_57850_99999 54695_49599_endc_99999 NOTPDB RPT TRAF domain-like--TRAF domain-like-- 46689_55729_ 46689_55729_ E_2 3_2_1 2 A_246 B_4125 E_4002 --A_217 B_2438 E_800 -- endn_46689 endc NOTPDB CPL Homeodomain-like--Acyl-CoA N-acyltransferases (Nat)-- 50814_81799_ 50814_81799_ E_6 4_2_2 6 A_14 B_98 E_391 --B_104 E_21 -- 49611_99999 endc_99999 NOTPDB CPL Lipocalins--Putative methyltransferase TM0872, insert domain-- 47762_47762_ 47762_47762_ E_28 6_3_3 28 B_2 E_75 --B_2 E_75 -- endn_47762_99999 47762_endc_99999 NOTPDB RPT PAH2 domain--PAH2 domain-- 57501_57667_ 57501_57667_ E_4 4_2_2 4 A_1 B_17 E_479 --A_23 B_24 E_4849 -- 57667_99999 57667_endc NOTPDB CPL Cystine-knot cytokines--C2H2 and C2HC zinc fingers-- 82895_82895_ 82895_82895_ E_353 25_15_10 353 E_618 --E_618 -- 57424_endn_50494_57362_57283_49854_55486_82895_57196_53822_48726_57492_49482_99999_57567 57424_54511_53300_endc_55486_82895_57196_57501_57567_99999 INPDB RPT TSP-1 type 1 repeat--TSP-1 type 1 repeat-- 51735_48305_ 51735_48305_ E_4 3_1_2 4 A_993 B_8798 E_3827 --B_1 E_9 -- endn 51735_99999 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--MHC class II-associated invariant chain ectoplasmic trimerization domain-- 53300_57889_ 53300_57889_ E_2 3_2_1 2 A_51 B_345 E_996 --A_7 B_6 E_663 -- endn_99999 endc NOTPDB CPL vWA-like--Cysteine-rich domain-- 50203_47095_ 50203_47095_ E_2 3_1_2 2 A_24 B_163 E_47 --A_2 B_16 E_689 -- endn 99999_47095 NOTPDB CPL Bacterial enterotoxins--HMG-box-- 54001_49758_ 54001_49758_ E_120 12_7_5 120 A_60 B_262 E_1838 --B_4 E_128 -- 54001_endn_49899_48452_47473_48695_99999 endc_49562_47473_99999_49758 INPDB CPL Cysteine proteinases--Calpain large subunit, middle domain (domain III)-- 57184_57586_ 57184_57586_ E_12 7_4_3 12 B_4 E_859 --A_15 B_23 E_359 -- endn_49785_57184_99999 57586_49265_99999 NOTPDB CPL Growth factor receptor domain--TNF receptor-like-- 47576_46966_ 47576_46966_ E_97 6_3_3 97 B_8 E_704 --A_7 B_30 E_584 -- endn_47576_99999 46966_endc_99999 NOTPDB CPL Calponin-homology domain, CH-domain--Spectrin repeat-- 52058_81606_ 52058_81606_ E_8 5_3_2 8 A_6 B_143 E_2568 --A_2 B_180 E_410 -- 52047_endn_99999 55073_99999 NOTPDB CPL L domain-like--Protein serine/threonine phosphatase 2C, catalytic domain-- 57196_56112_ 57196_56112_ E_16 8_4_4 16 A_2 B_7 E_2358 --A_114 B_971 E_9319 -- 57196_51110_49785_99999 51110_endc_49265_99999 NOTPDB CPL EGF/Laminin--Protein kinase-like (PK-like)-- 57889_50729_ 57889_50729_ E_3 4_2_2 3 A_7 B_6 E_663 --A_14 B_44 E_3057 -- endn_99999 endc_99999 NOTPDB CPL Cysteine-rich domain--PH domain-like-- 54695_52047_ 54695_52047_ E_8 3_2_1 8 B_6 E_2078 --A_9 B_93 E_2576 -- endn_99999 endc NOTPDB CPL POZ domain--RNI-like-- 81324_47473_ 81324_47473_ E_8 3_2_1 8 A_34 B_130 E_1059 --A_51 B_190 E_2808 -- 81324_99999 endc NOTPDB CPL Voltage-gated potassium channels--EF-hand-- 81383_52058_ 81383_52058_ E_39 7_4_3 39 B_8 E_2068 --A_6 B_143 E_2568 -- 47413_endn_99999_53098 48452_endc_99999 NOTPDB CPL F-box domain--L domain-like-- 55486_82895_ 55486_82895_ E_99 8_5_3 99 A_64 B_735 E_1617 --E_618 -- endn_49854_52313_53850_99999 endc_82895_99999 NOTPDB CPL Metalloproteases ("zincins"), catalytic domain--TSP-1 type 1 repeat-- 47912_47912_ 47912_47912_ E_4 3_2_1 4 E_91 --E_91 -- 50729_99999 endc NOTPDB RPT Wiscott-Aldrich syndrome protein, WASP, C-terminal domain--Wiscott-Aldrich syndrome protein, WASP, C-terminal domain-- 47473_55550_ 47473_55550_ E_21 5_2_3 21 A_51 B_190 E_2808 --A_4 B_15 E_910 -- 47668_51695 50044_99999_57850 INPDB CPL EF-hand--SH2 domain-- 48452_51004_ 48452_51004_ E_6 3_2_1 6 A_146 B_1937 E_3442 --A_2 B_13 E_266 -- endn_99999 endc NOTPDB CPL TPR-like--C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase-- 48403_57850_ 48403_57850_ E_7 4_1_3 7 A_4 B_168 E_2348 --A_19 B_52 E_3605 -- endn 57783_57850_99999 NOTPDB CPL Ankyrin repeat--RING finger domain, C3HC4-- 57196_48508_ 57196_48508_ E_7 3_1_2 7 A_2 B_7 E_2358 --A_1 B_10 E_1172 -- endn endc_99999 NOTPDB CPL EGF/Laminin--Nuclear receptor ligand-binding domain-- 81811_82754_ 81811_82754_ E_78 4_2_2 78 B_2 E_94 --A_1 E_89 -- 81995_99999 endc_99999 INPDB CPL Helical domain of Sec23/24--C-terminal, gelsolin-like domain of Sec23/24-- 50729_82185_ 50729_82185_ E_2 4_2_2 2 A_14 B_44 E_3057 --B_91 E_127 -- endn_99999 82185_99999 NOTPDB CPL PH domain-like--Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain-- 47576_52540_ 47576_52540_ E_4 5_2_3 4 B_8 E_704 --A_2129 B_14320 E_12913 -- 52540_99999 52540_47576_99999 NOTPDB CPL Calponin-homology domain, CH-domain--P-loop containing nucleotide triphosphate hydrolases-- 50044_56112_ 50044_56112_ E_19 4_2_2 19 A_2 B_84 E_1671 --A_114 B_971 E_9319 -- endn_99999 endc_99999 NOTPDB CPL SH3-domain--Protein kinase-like (PK-like)-- 48034_55931_ 48034_55931_ E_51 9_5_4 51 B_4 E_57 --A_25 B_190 E_126 -- endn_46579_48034_55931_99999 57756_endc_48034_99999 INPDB CPL Guanido kinase N-terminal domain--Glutamine synthase/guanido kinase-- 50978_54518_ 50978_54518_ E_4 4_2_2 4 A_7 B_101 E_3576 --B_3 E_73 -- endn_99999 endc_99999 NOTPDB CPL WD40-repeat--Transcriptional factor tubby, C-terminal domain-- 48403_56112_ 48403_56112_ E_21 4_2_2 21 A_4 B_168 E_2348 --A_114 B_971 E_9319 -- endn_99999 endc_99999 NOTPDB CPL Ankyrin repeat--Protein kinase-like (PK-like)-- 64153_50475_ 64153_50475_ E_2 3_2_1 2 A_17 B_65 E_30 --A_59 B_417 E_63 -- endn_99999 endc NOTPDB CPL YjeF N-terminal domain-like--FMN-binding split barrel-- 57850_57850_ 57850_57850_ E_81 15_9_6 81 A_19 B_52 E_3605 --A_19 B_52 E_3605 -- 51197_endn_48264_49265_53098_53223_48403_99999_57850 57845_57667_endc_57850_47823_99999 NOTPDB RPT RING finger domain, C3HC4--RING finger domain, C3HC4-- 57196_63825_ 57196_63825_ E_75 12_7_5 75 A_2 B_7 E_2358 --A_7 B_35 E_205 -- 57196_57424_endn_63825_57184_57567_99999 57196_75011_63825_endc_99999 INPDB CPL EGF/Laminin--Low density lipoprotein (LDL) receptor YWTD domain-- 54928_48371_ 54928_48371_ E_5 5_3_2 5 A_6 B_60 E_3471 --A_73 B_255 E_3951 -- endn_55307_99999 endc_99999 NOTPDB CPL RNA-binding domain, RBD--ARM repeat-- 55307_52490_ 55307_52490_ E_4 5_2_3 4 A_28 B_99 E_286 --A_37 B_111 E_301 -- 53850_52490 52799_55307_99999 NOTPDB CPL Tubulin, C-terminal domain--Tubulin, GTPase domain-- 51569_56672_ 51569_56672_ E_2 4_2_2 2 A_136 B_1089 E_356 --A_66 B_378 E_3164 -- 53098_99999 51569_endc NOTPDB CPL Aldolase--DNA/RNA polymerases-- 56112_50985_ 56112_50985_ E_10 4_2_2 10 A_114 B_971 E_9319 --B_15 E_285 -- endn_99999 endc_99999 NOTPDB CPL Protein kinase-like (PK-like)--RCC1/BLIP-II-- 54719_54928_ 54719_54928_ E_2 3_1_2 2 A_12 B_120 E_42 --A_6 B_60 E_3471 -- endn 54928_99999 NOTPDB CPL Fe,Mn superoxide dismutase (SOD), C-terminal domain--RNA-binding domain, RBD-- 50729_57850_ 50729_57850_ E_7 5_3_2 7 A_14 B_44 E_3057 --A_19 B_52 E_3605 -- endn_47031_99999 endc_99999 NOTPDB CPL PH domain-like--RING finger domain, C3HC4-- 57362_57362_ 57362_57362_ E_59 11_6_5 59 A_1 B_1 E_226 --A_1 B_1 E_226 -- 57196_endn_48726_57362_50814_99999 57196_50242_57362_endc_99999 INPDB RPT BPTI-like--BPTI-like-- 81383_51004_ 81383_51004_ E_4 3_1_2 4 B_8 E_2068 --A_2 B_13 E_266 -- endn endc_99999 NOTPDB CPL F-box domain--C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase-- 56436_57535_ 56436_57535_ E_27 7_4_3 27 A_2 B_62 E_1409 --B_3 E_582 -- 57196_endn_49785_99999 endc_99999_57535 NOTPDB CPL C-type lectin-like--Complement control module/SCR domain-- 54236_55874_ 54236_55874_ E_2 4_2_2 2 A_18 B_81 E_1815 --A_178 B_2970 E_398 -- endn_99999 endc_99999 NOTPDB CPL Ubiquitin-like--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 52025_57850_ 52025_57850_ E_44 6_4_2 44 A_6 B_44 E_200 --A_19 B_52 E_3605 -- 81321_endn_47648_99999 endc_99999 NOTPDB CPL Transferrin receptor ectodomain, apical domain--RING finger domain, C3HC4-- 50729_56112_ 50729_56112_ E_50 5_2_3 50 A_14 B_44 E_3057 --A_114 B_971 E_9319 -- endn_99999 50729_endc_99999 NOTPDB CPL PH domain-like--Protein kinase-like (PK-like)-- 48726_56436_ 48726_56436_ E_46 7_4_3 46 A_14 B_78 E_4071 --A_2 B_62 E_1409 -- endn_49785_57184_99999 56436_endc_99999 NOTPDB CPL Immunoglobulin--C-type lectin-like-- 47986_56112_ 47986_56112_ E_3 4_2_2 3 A_8 B_32 E_410 --A_114 B_971 E_9319 -- endn_99999 endc_99999 NOTPDB CPL DEATH domain--Protein kinase-like (PK-like)-- 48097_56112_ 48097_56112_ E_42 5_2_3 42 A_2 B_9 E_367 --A_114 B_971 E_9319 -- endn_99999 50729_endc_99999 NOTPDB CPL Regulator of G-protein signalling, RGS--Protein kinase-like (PK-like)-- 47862_56300_ 47862_56300_ E_8 5_2_3 8 A_2 E_136 --A_170 B_837 E_750 -- endn_99999 50122_endc_99999 NOTPDB CPL Saposin--Metallo-dependent phosphatases-- 82199_57667_ 82199_57667_ E_17 5_3_2 17 A_2 B_29 E_692 --A_23 B_24 E_4849 -- endn_57667_99999 57667_99999 NOTPDB CPL SET domain--C2H2 and C2HC zinc fingers-- 48726_81296_ 48726_81296_ E_6 6_3_3 6 A_14 B_78 E_4071 --A_40 B_404 E_1207 -- endn_48726_99999 48726_endc_99999 NOTPDB CPL Immunoglobulin--E set domains-- 52047_56112_ 52047_56112_ E_112 11_7_4 112 A_9 B_93 E_2576 --A_114 B_971 E_9319 -- 52047_endn_52058_54334_53041_56112_99999 52768_endc_56112_99999 NOTPDB CPL RNI-like--Protein kinase-like (PK-like)-- 57889_49562_ 57889_49562_ E_35 5_3_2 35 A_7 B_6 E_663 --B_12 E_1627 -- endn_57889_99999 99999_56112 NOTPDB CPL Cysteine-rich domain--C2 domain (Calcium/lipid-binding domain, CaLB)-- 46966_47473_ 46966_47473_ E_82 7_4_3 82 A_7 B_30 E_584 --A_51 B_190 E_2808 -- endn_46966_49723_99999 47473_endc_99999 NOTPDB CPL Spectrin repeat--EF-hand-- 55486_57546_ 55486_57546_ E_10 3_1_2 10 A_64 B_735 E_1617 --E_58 -- endn endc_99999 NOTPDB CPL Metalloproteases ("zincins"), catalytic domain--Sea anemone toxin k-- 52058_52047_ 52058_52047_ E_136 14_6_8 136 A_6 B_143 E_2568 --A_9 B_93 E_2576 -- 49452_52540_52047_endn_52058_99999 52540_81321_endc_52047_52058_52200_56112_99999 NOTPDB CPL L domain-like--RNI-like-- 82895_57802_ 82895_57802_ E_7 3_2_1 7 E_618 --A_77 B_171 E_177 -- 99999_51011 endc NOTPDB CPL TSP-1 type 1 repeat--Rubredoxin-like-- 49503_57850_ 49503_57850_ E_2 4_2_2 2 A_81 B_368 E_450 --A_19 B_52 E_3605 -- endn_99999 49599_endc NOTPDB CPL Cupredoxins--RING finger domain, C3HC4-- 52540_52058_ 52540_52058_ E_38 11_6_5 38 A_2129 B_14320 E_12913 --A_6 B_143 E_2568 -- 52540_47220_endn_46589_52200_99999 52047_52540_52058_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--L domain-like-- 47986_52129_ 47986_52129_ E_38 4_2_2 38 A_8 B_32 E_410 --A_4 B_70 E_188 -- 47986_endn endc_99999 NOTPDB CPL DEATH domain--Caspase-like-- 69179_53300_ 69179_53300_ E_21 6_3_3 21 A_2 B_11 E_172 --A_51 B_345 E_996 -- endn_69318_99999 69179_69318_endc INPDB CPL Integrin domains--vWA-like-- 49265_48403_ 49265_48403_ E_4 3_1_2 4 A_23 B_135 E_1734 --A_4 B_168 E_2348 -- endn endc_99999 NOTPDB CPL Fibronectin type III--Ankyrin repeat-- 55116_52540_ 55116_52540_ E_9 4_2_2 9 A_3 B_12 E_37 --A_2129 B_14320 E_12913 -- 48498_99999 endc_99999 NOTPDB CPL Formiminotransferase domain of formiminotransferase-cyclodeaminase.--P-loop containing nucleotide triphosphate hydrolases-- 75399_75399_ 75399_75399_ E_24 6_3_3 24 B_2 E_52 --B_2 E_52 -- 46966_endn_99999 75399_endc_99999 NOTPDB RPT Plakin repeat--Plakin repeat-- 57196_63829_ 57196_63829_ E_5 6_4_2 5 A_2 B_7 E_2358 --A_5 B_40 E_110 -- 57196_50952_57184_99999 57196_99999 NOTPDB CPL EGF/Laminin--Diisopropylfluorophosphatase (phosphotriesterase, DFP)-- 57196_48113_ 57196_48113_ E_14 4_2_2 14 A_2 B_7 E_2358 --A_2 B_55 E_453 -- endn_99999 endc_99999 INPDB CPL EGF/Laminin--Heme-dependent peroxidases-- 82671_57196_ 82671_57196_ E_3 3_1_2 3 E_73 --A_2 B_7 E_2358 -- endn 57196_99999 NOTPDB CPL SEA domain--EGF/Laminin-- 57701_57701_ 57701_57701_ E_3 4_2_2 3 A_9 B_13 E_379 --A_9 B_13 E_379 -- endn_99999 endc_99999 NOTPDB RPT Zn2/Cys6 DNA-binding domain--Zn2/Cys6 DNA-binding domain-- 56317_54197_ 56317_54197_ E_5 4_2_2 5 A_34 B_296 E_127 --A_38 B_208 E_173 -- endn_99999 endc_99999 INPDB CPL Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase--HIT-like-- 57184_52058_ 57184_52058_ E_58 9_4_5 58 B_4 E_859 --A_6 B_143 E_2568 -- endn_52058_99999_49265 57184_endc_56112_49265_99999 INPDB CPL Growth factor receptor domain--L domain-like-- 57196_69687_ 57196_69687_ E_38 4_2_2 38 A_2 B_7 E_2358 --E_40 -- 57196_99999 endc_99999 INPDB CPL EGF/Laminin--Integrin beta tail domain-- 52058_57184_ 52058_57184_ E_63 9_4_5 63 A_6 B_143 E_2568 --B_4 E_859 -- endn_57184_49265_99999 52058_57184_endc_99999_54862 INPDB CPL L domain-like--Growth factor receptor domain-- 51045_50729_ 51045_50729_ E_7 4_2_2 7 B_5 E_413 --A_14 B_44 E_3057 -- endn_99999 50729_48350 NOTPDB CPL WW domain--PH domain-like-- 81837_50978_ 81837_50978_ E_55 6_3_3 55 B_1 E_90 --A_7 B_101 E_3576 -- endn_50729_99999 57903_endc_99999 NOTPDB CPL BEACH domain--WD40-repeat-- 57196_49265_ 57196_49265_ E_16 6_3_3 16 A_2 B_7 E_2358 --A_23 B_135 E_1734 -- 57196_49854_99999 99999_49265_57535 NOTPDB CPL EGF/Laminin--Fibronectin type III-- 56672_81442_ 56672_81442_ E_2 3_2_1 2 A_66 B_378 E_3164 --A_20 B_160 E_20 -- endn_56672 endc NOTPDB CPL DNA/RNA polymerases--Cytochrome c oxidase subunit I-like-- 50630_46689_ 50630_46689_ E_2 3_1_2 2 A_15 B_69 E_1046 --A_246 B_4125 E_4002 -- endn 56672_endc NOTPDB CPL Acid proteases--Homeodomain-like-- 57196_53300_ 57196_53300_ E_37 8_4_4 37 A_2 B_7 E_2358 --A_51 B_345 E_996 -- 57196_endn_53300_99999 57196_53300_endc_99999 NOTPDB CPL EGF/Laminin--vWA-like-- 57467_48726_ 57467_48726_ E_23 7_4_3 23 A_2 B_8 E_358 --A_14 B_78 E_4071 -- endn_57256_49265_99999 57362_endc_99999 NOTPDB CPL Ovomucoid/PCI-1 like inhibitors--Immunoglobulin-- 52540_49417_ 52540_49417_ E_4 3_1_2 4 A_2129 B_14320 E_12913 --A_10 B_39 E_458 -- endn endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--p53-like transcription factors-- 57196_49854_ 57196_49854_ E_54 10_5_5 54 A_2 B_7 E_2358 --B_1 E_636 -- 57196_endn_49854_55486_99999 57196_endc_49854_99999_57535 NOTPDB CPL EGF/Laminin--Spermadhesin, CUB domain-- 55003_56112_ 55003_56112_ E_4 3_1_2 4 A_5 B_1 E_78 --A_114 B_971 E_9319 -- endn endc_55073 NOTPDB CPL Poly(A) polymerase, C-terminal domain--Protein kinase-like (PK-like)-- 54160_82199_ 54160_82199_ E_12 3_2_1 12 A_7 B_11 E_374 --A_2 B_29 E_692 -- endn_99999 endc NOTPDB CPL Chromo domain-like--SET domain-- 52317_52317_ 52317_52317_ E_11 3_2_1 11 A_204 B_1244 E_262 --A_204 B_1244 E_262 -- endn_99999 endc NOTPDB RPT Class I glutamine amidotransferase-like--Class I glutamine amidotransferase-like-- 50729_50891_ 50729_50891_ E_4 3_2_1 4 A_14 B_44 E_3057 --A_6 B_149 E_393 -- endn_99999 endc NOTPDB CPL PH domain-like--Cyclophilin (peptidylprolyl isomerase)-- 51101_51101_ 51101_51101_ E_41 8_5_3 41 B_5 E_106 --B_5 E_106 -- 52540_51101_endn_99999_56112 51101_50965_endc NOTPDB RPT Mannose-binding lectins--Mannose-binding lectins-- 57889_48350_ 57889_48350_ E_53 5_3_2 53 A_7 B_6 E_663 --B_8 E_786 -- endn_55550_99999 endc_99999 NOTPDB CPL Cysteine-rich domain--GTPase activation domain, GAP-- 63825_63825_ 63825_63825_ E_5 8_5_3 5 A_7 B_35 E_205 --A_7 B_35 E_205 -- 57196_endn_50969_57184_99999 57424_endc_99999 NOTPDB RPT Low density lipoprotein (LDL) receptor YWTD domain--Low density lipoprotein (LDL) receptor YWTD domain-- 54236_54236_ 54236_54236_ E_107 9_5_4 107 A_18 B_81 E_1815 --A_18 B_81 E_1815 -- 54211_endn_54236_49354_99999 54236_endc_47031_99999 NOTPDB RPT Ubiquitin-like--Ubiquitin-like-- 56112_51206_ 56112_51206_ E_6 4_2_2 6 A_114 B_971 E_9319 --A_2 B_447 E_467 -- endn_99999 endc_99999 NOTPDB CPL Protein kinase-like (PK-like)--cAMP-binding domain-like-- 57184_57610_ 57184_57610_ E_31 7_3_4 31 B_4 E_859 --A_1 B_1 E_118 -- endn_54511_99999 50969_57610_endc_99999 NOTPDB CPL Growth factor receptor domain--Thyroglobulin type-1 domain-- 57889_52799_ 57889_52799_ E_6 4_2_2 6 A_7 B_6 E_663 --A_16 B_112 E_1201 -- endn_99999 endc_49562 NOTPDB CPL Cysteine-rich domain--(Phosphotyrosine protein) phosphatases II-- 63501_57440_ 63501_57440_ E_16 6_3_3 16 A_1 E_180 --A_6 B_6 E_228 -- endn_48726_99999 endc_56112_99999 NOTPDB CPL Frizzled cystein-rich domain--Kringle-like-- 57302_57196_ 57302_57196_ E_5 6_2_4 5 A_3 B_7 E_578 --A_2 B_7 E_2358 -- endn_99999 57196_57302_50494_99999 NOTPDB CPL Snake toxin-like--EGF/Laminin-- 54427_46934_ 54427_46934_ E_20 5_4_1 20 A_11 B_446 E_248 --A_21 B_114 E_420 -- 52047_52058_52075_99999 endc NOTPDB CPL NTF2-like--UBA-like-- 57184_57196_ 57184_57196_ E_282 29_18_11 282 B_4 E_859 --A_2 B_7 E_2358 -- 56436_57424_endn_49899_57095_57184_53300_63829_57196_69322_48726_57581_47686_54511_49854_82895_82153_99999 82153_57196_48726_63825_49899_57184_57581_endc_63829_57535_99999 NOTPDB CPL Growth factor receptor domain--EGF/Laminin-- 53098_51569_ 53098_51569_ E_23 8_4_4 23 A_290 B_2494 E_2335 --A_136 B_1089 E_356 -- endn_56672_53098_99999 56672_endc_53098_99999 NOTPDB CPL Ribonuclease H-like--Aldolase-- 81321_56112_ 81321_56112_ E_3 3_1_2 3 A_7 B_20 E_8234 --A_114 B_971 E_9319 -- endn endc_99999 NOTPDB CPL Family A G protein-coupled receptor-like--Protein kinase-like (PK-like)-- 57850_49599_ 57850_49599_ E_108 9_3_6 108 A_19 B_52 E_3605 --A_1 E_685 -- endn_49503_99999 50978_49599_50156_endc_46988_99999 NOTPDB CPL RING finger domain, C3HC4--TRAF domain-like-- 57850_49265_ 57850_49265_ E_6 3_1_2 6 A_19 B_52 E_3605 --A_23 B_135 E_1734 -- endn 99999_57850 NOTPDB CPL RING finger domain, C3HC4--Fibronectin type III-- 52540_51101_ 52540_51101_ E_2 4_2_2 2 A_2129 B_14320 E_12913 --B_5 E_106 -- 52540_endn 51101_endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Mannose-binding lectins-- 46626_52047_ 46626_52047_ E_2 3_1_2 2 A_40 B_894 E_220 --A_9 B_93 E_2576 -- endn 52058_99999 NOTPDB CPL Cytochrome c--RNI-like-- 50156_57850_ 50156_57850_ E_3 4_2_2 3 A_28 B_534 E_1380 --A_19 B_52 E_3605 -- endn_99999 endc_99999 NOTPDB CPL PDZ domain-like--RING finger domain, C3HC4-- 56112_48403_ 56112_48403_ E_8 4_2_2 8 A_114 B_971 E_9319 --A_4 B_168 E_2348 -- endn_99999 53795_99999 NOTPDB CPL Protein kinase-like (PK-like)--Ankyrin repeat-- 48726_52058_ 48726_52058_ E_2 4_2_2 2 A_14 B_78 E_4071 --A_6 B_143 E_2568 -- endn_99999 57440_endc NOTPDB CPL Immunoglobulin--L domain-like-- 57603_57440_ 57603_57440_ E_18 7_4_3 18 B_1 E_56 --A_6 B_6 E_228 -- 57196_endn_57603_99999 57440_50494_99999 INPDB CPL Fibronectin type I module--Kringle-like-- 82199_48452_ 82199_48452_ E_19 5_4_1 19 A_2 B_29 E_692 --A_146 B_1937 E_3442 -- endn_48452_82199_99999 endc NOTPDB CPL SET domain--TPR-like-- 57924_52540_ 57924_52540_ E_11 5_3_2 11 B_1 E_142 --A_2129 B_14320 E_12913 -- 57924_endn_99999 endc_99999 NOTPDB CPL Inhibitor of apoptosis (IAP) repeat--P-loop containing nucleotide triphosphate hydrolases-- 50156_56112_ 50156_56112_ E_2 3_2_1 2 A_28 B_534 E_1380 --A_114 B_971 E_9319 -- endn_57716 endc NOTPDB CPL PDZ domain-like--Protein kinase-like (PK-like)-- 53098_81296_ 53098_81296_ E_2 3_2_1 2 A_290 B_2494 E_2335 --A_40 B_404 E_1207 -- endn_46919 endc NOTPDB CPL Ribonuclease H-like--E set domains-- 49854_57535_ 49854_57535_ E_61 9_6_3 61 B_1 E_636 --B_3 E_582 -- 50249_57196_endn_49854_99999_57535 endc_49854_57535 NOTPDB CPL Spermadhesin, CUB domain--Complement control module/SCR domain-- 46785_53167_ 46785_53167_ E_4 4_2_2 4 A_1241 B_7979 E_2143 --A_41 B_308 E_92 -- 47986_endn endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Purine and uridine phosphorylases-- 48350_52540_ 48350_52540_ E_7 4_2_2 7 B_8 E_786 --A_2129 B_14320 E_12913 -- endn_99999 endc_99999 NOTPDB CPL GTPase activation domain, GAP--P-loop containing nucleotide triphosphate hydrolases-- 57492_57492_ 57492_57492_ E_12 7_3_4 12 B_1 E_71 --B_1 E_71 -- endn_57492_99999 57196_endc_57492_99999 INPDB RPT Trefoil--Trefoil-- 46966_50044_ 46966_50044_ E_14 4_2_2 14 A_7 B_30 E_584 --A_2 B_84 E_1671 -- endn_46966 46966_99999 NOTPDB CPL Spectrin repeat--SH3-domain-- 82199_82199_ 82199_82199_ E_7 4_1_3 7 A_2 B_29 E_692 --A_2 B_29 E_692 -- endn 48452_endc_99999 NOTPDB RPT SET domain--SET domain-- 81606_81601_ 81606_81601_ E_31 4_2_2 31 A_2 B_180 E_410 --B_1 E_34 -- endn_99999 endc_99999 INPDB CPL Protein serine/threonine phosphatase 2C, catalytic domain--Protein serine/threonine phosphatase 2C, C-terminal domain-- 53300_57850_ 53300_57850_ E_8 4_2_2 8 A_51 B_345 E_996 --A_19 B_52 E_3605 -- endn_99999 endc_99999 NOTPDB CPL vWA-like--RING finger domain, C3HC4-- 47668_47473_ 47668_47473_ E_21 4_2_2 21 E_24 --A_51 B_190 E_2808 -- endn_99999 endc_55550 INPDB CPL N-terminal domain of cbl (N-cbl)--EF-hand-- 52833_47933_ 52833_47933_ E_13 4_3_1 13 A_220 B_2517 E_2068 --E_14 -- endn_52833_99999 endc NOTPDB CPL Thioredoxin-like--Endoplasmic reticulum protein ERP29, C-domain-- 54695_50978_ 54695_50978_ E_7 3_1_2 7 B_6 E_2078 --A_7 B_101 E_3576 -- endn endc_99999 NOTPDB CPL POZ domain--WD40-repeat-- 57667_51735_ 57667_51735_ E_2 4_2_2 2 A_23 B_24 E_4849 --A_993 B_8798 E_3827 -- endn_57667 endc_99999 NOTPDB CPL C2H2 and C2HC zinc fingers--NAD(P)-binding Rossmann-fold domains-- 53300_69318_ 53300_69318_ E_47 6_3_3 47 A_51 B_345 E_996 --A_6 B_79 E_181 -- endn_69179_99999 69179_endc_99999 NOTPDB CPL vWA-like--Integrin alpha N-terminal domain-- 48350_55550_ 48350_55550_ E_11 4_2_2 11 B_8 E_786 --A_4 B_15 E_910 -- endn_50044 endc_99999 NOTPDB CPL GTPase activation domain, GAP--SH2 domain-- 50978_47769_ 50978_47769_ E_6 3_1_2 6 A_7 B_101 E_3576 --A_6 B_20 E_633 -- endn 99999_57850 NOTPDB CPL WD40-repeat--SAM/Pointed domain-- 57288_57288_ 57288_57288_ E_14 3_2_1 14 B_2 E_22 --B_2 E_22 -- endn_99999 endc NOTPDB RPT Midkine--Midkine-- 81383_56672_ 81383_56672_ E_2 4_2_2 2 B_8 E_2068 --A_66 B_378 E_3164 -- endn_99999 56672_99999 NOTPDB CPL F-box domain--DNA/RNA polymerases-- 57863_50729_ 57863_50729_ E_16 3_1_2 16 B_10 E_253 --A_14 B_44 E_3057 -- endn 50729_99999 NOTPDB CPL Pyk2-associated protein beta ARF-GAP domain--PH domain-like-- 48726_57196_ 48726_57196_ E_28 8_4_4 28 A_14 B_78 E_4071 --A_2 B_7 E_2358 -- 57424_endn_49265_99999 57196_57184_endc_99999 NOTPDB CPL Immunoglobulin--EGF/Laminin-- 57603_57603_ 57603_57603_ E_13 5_3_2 13 B_1 E_56 --B_1 E_56 -- 57603_49265_99999 57603_endc INPDB RPT Fibronectin type I module--Fibronectin type I module-- 63380_53187_ 63380_53187_ E_3 4_2_2 3 A_34 B_499 E_327 --A_105 B_1042 E_648 -- endn_99999 endc_99999 NOTPDB CPL Riboflavin synthase domain-like--Zn-dependent exopeptidases-- 57850_81665_ 57850_81665_ E_2 3_2_1 2 A_19 B_52 E_3605 --A_43 B_361 E_378 -- endn_99999 endc NOTPDB CPL RING finger domain, C3HC4--Calcium ATPase, transmembrane domain M-- 46785_57903_ 46785_57903_ E_2 3_1_2 2 A_1241 B_7979 E_2143 --A_56 B_38 E_1435 -- endn 57903_99999 NOTPDB CPL "Winged helix" DNA-binding domain--FYVE/PHD zinc finger-- 47473_57610_ 47473_57610_ E_15 6_4_2 15 A_51 B_190 E_2808 --A_1 B_1 E_118 -- 57196_endn_57467_99999 endc_99999 NOTPDB CPL EF-hand--Thyroglobulin type-1 domain-- 54236_54001_ 54236_54001_ E_17 5_2_3 17 A_18 B_81 E_1815 --A_60 B_262 E_1838 -- endn_99999 57667_endc_99999 NOTPDB CPL Ubiquitin-like--Cysteine proteinases-- 48371_48403_ 48371_48403_ E_9 4_2_2 9 A_73 B_255 E_3951 --A_4 B_168 E_2348 -- endn_99999 endc_99999 NOTPDB CPL ARM repeat--Ankyrin repeat-- 51110_57196_ 51110_57196_ E_5 4_2_2 5 B_7 E_208 --A_2 B_7 E_2358 -- endn_51110 99999_56112 NOTPDB CPL alpha-D-mannose-specific plant lectins--EGF/Laminin-- 51658_56091_ 51658_56091_ E_3 3_1_2 3 A_102 B_575 E_65 --A_34 B_180 E_92 -- endn endc_99999 NOTPDB CPL Xylose isomerase-like--DNA ligase/mRNA capping enzyme, catalytic domain-- 82671_50494_ 82671_50494_ E_10 3_2_1 10 E_73 --A_19 B_482 E_1600 -- endn_99999 endc NOTPDB CPL SEA domain--Trypsin-like serine proteases-- 49265_57850_ 49265_57850_ E_7 5_2_3 7 A_23 B_135 E_1734 --A_19 B_52 E_3605 -- endn_57850 57845_57850_99999 NOTPDB CPL Fibronectin type III--RING finger domain, C3HC4-- 56059_52440_ 56059_52440_ E_18 5_3_2 18 A_192 B_1104 E_490 --A_71 B_698 E_210 -- endn_52440_99999 endc_99999 INPDB CPL Glutathione synthetase ATP-binding domain-like--PreATP-grasp domain-- 46942_57783_ 46942_57783_ E_37 4_3_1 37 E_79 --A_193 B_620 E_393 -- endn_47676_99999 endc NOTPDB CPL Elongation factor TFIIS domain 2--Zinc beta-ribbon-- 48065_48065_ 48065_48065_ E_4 5_2_3 4 A_3 B_7 E_597 --A_3 B_7 E_597 -- endn_99999 50978_endc_99999 NOTPDB RPT DBL homology domain (DH-domain)--DBL homology domain (DH-domain)-- 51658_50729_ 51658_50729_ E_3 3_1_2 3 A_102 B_575 E_65 --A_14 B_44 E_3057 -- endn 52047_52058 NOTPDB CPL Xylose isomerase-like--PH domain-like-- 49265_56112_ 49265_56112_ E_52 9_4_5 52 A_23 B_135 E_1734 --A_114 B_971 E_9319 -- endn_48726_99999_49265 47769_52058_48726_endc_99999 NOTPDB CPL Fibronectin type III--Protein kinase-like (PK-like)-- 53383_46689_ 53383_46689_ E_2 3_1_2 2 A_367 B_2974 E_1139 --A_246 B_4125 E_4002 -- endn endc_99999 NOTPDB CPL PLP-dependent transferases--Homeodomain-like-- 57667_57850_ 57667_57850_ E_4 4_2_2 4 A_23 B_24 E_4849 --A_19 B_52 E_3605 -- endn_99999 57667_99999 NOTPDB CPL C2H2 and C2HC zinc fingers--RING finger domain, C3HC4-- 57424_52047_ 57424_52047_ E_2 4_2_2 2 E_497 --A_9 B_93 E_2576 -- endn_99999 81321_endc NOTPDB CPL LDL receptor-like module--RNI-like-- 57196_57467_ 57196_57467_ E_27 9_6_3 27 A_2 B_7 E_2358 --A_2 B_8 E_358 -- 50242_57196_endn_57467_47473_99999 endc_47473_99999 INPDB CPL EGF/Laminin--Ovomucoid/PCI-1 like inhibitors-- 51445_57196_ 51445_57196_ E_7 3_1_2 7 A_89 B_1646 E_1474 --A_2 B_7 E_2358 -- endn endc_99999 NOTPDB CPL (Trans)glycosidases--EGF/Laminin-- 56672_52047_ 56672_52047_ E_4 4_2_2 4 A_66 B_378 E_3164 --A_9 B_93 E_2576 -- endn_52075 endc_99999 NOTPDB CPL DNA/RNA polymerases--RNI-like-- 57262_55486_ 57262_55486_ E_3 4_3_1 3 A_1 B_4 E_63 --A_64 B_735 E_1617 -- endn_69318_99999 endc NOTPDB CPL Leech antihemostatic proteins--Metalloproteases ("zincins"), catalytic domain-- 50729_46785_ 50729_46785_ E_15 6_2_4 15 A_14 B_44 E_3057 --A_1241 B_7979 E_2143 -- endn_48065 50729_endc_46785_99999 NOTPDB CPL PH domain-like--"Winged helix" DNA-binding domain-- 81606_81606_ 81606_81606_ E_2 3_1_2 2 A_2 B_180 E_410 --A_2 B_180 E_410 -- endn endc_99999 NOTPDB RPT Protein serine/threonine phosphatase 2C, catalytic domain--Protein serine/threonine phosphatase 2C, catalytic domain-- 81995_53300_ 81995_53300_ E_38 6_3_3 38 A_1 B_2 E_111 --A_51 B_345 E_996 -- endn_46565_99999 endc_81995_99999 INPDB CPL beta-sandwich domain of Sec23/24--vWA-like-- 52058_50978_ 52058_50978_ E_5 3_1_2 5 A_6 B_143 E_2568 --A_7 B_101 E_3576 -- endn endc_99999 NOTPDB CPL L domain-like--WD40-repeat-- 49854_50242_ 49854_50242_ E_5 3_2_1 5 B_1 E_636 --A_2 B_2 E_148 -- endn_49854 endc NOTPDB CPL Spermadhesin, CUB domain--TIMP-like-- 57196_82153_ 57196_82153_ E_4 4_2_2 4 A_2 B_7 E_2358 --A_4 B_33 E_126 -- 57196_57184 82153_99999 NOTPDB CPL EGF/Laminin--FAS1 domain-- 57016_53955_ 57016_53955_ E_15 3_1_2 15 B_1 E_48 --A_9 B_652 E_194 -- endn endc_99999 NOTPDB CPL Plant lectins/antimicrobial peptides--Lysozyme-like-- 55166_51294_ 55166_51294_ E_17 4_2_2 17 A_1 B_75 E_18 --A_61 B_50 E_53 -- endn_99999 endc_99999 NOTPDB CPL Hedgehog/DD-pepidase--Hedgehog/intein (Hint) domain-- 57863_49562_ 57863_49562_ E_9 4_2_2 9 B_10 E_253 --B_12 E_1627 -- endn_99999 endc_99999 NOTPDB CPL Pyk2-associated protein beta ARF-GAP domain--C2 domain (Calcium/lipid-binding domain, CaLB)-- 74924_74924_ 74924_74924_ E_18 5_3_2 18 B_2 E_135 --B_2 E_135 -- endn_48403_99999 endc_99999 NOTPDB RPT Cap-Gly domain--Cap-Gly domain-- 51197_51182_ 51197_51182_ E_2 3_2_1 2 A_15 B_244 E_617 --A_107 B_1063 E_385 -- endn_99999 endc NOTPDB CPL Clavaminate synthase-like--RmlC-like cupins-- 57424_57184_ 57424_57184_ E_10 6_2_4 10 E_497 --B_4 E_859 -- 57424_99999 57196_57424_63825_99999 NOTPDB CPL LDL receptor-like module--Growth factor receptor domain-- 50044_50729_ 50044_50729_ E_26 5_3_2 26 A_2 B_84 E_1671 --A_14 B_44 E_3057 -- endn_55550_99999 endc_99999 NOTPDB CPL SH3-domain--PH domain-like-- 53784_53784_ 53784_53784_ E_37 4_3_1 37 A_5 B_107 E_87 --A_5 B_107 E_87 -- endn_54593_99999 endc NOTPDB RPT Phosphofructokinase--Phosphofructokinase-- 49599_57667_ 49599_57667_ E_5 6_2_4 5 A_1 E_685 --A_23 B_24 E_4849 -- 57667_99999 57667_49599_endc_99999 NOTPDB CPL TRAF domain-like--C2H2 and C2HC zinc fingers-- 48403_50729_ 48403_50729_ E_9 5_2_3 9 A_4 B_168 E_2348 --A_14 B_44 E_3057 -- endn_57863 57863_endc_99999 NOTPDB CPL Ankyrin repeat--PH domain-like-- 82671_82671_ 82671_82671_ E_3 4_2_2 3 E_73 --E_73 -- endn_82671 82671_99999 NOTPDB RPT SEA domain--SEA domain-- 51004_50978_ 51004_50978_ E_5 4_2_2 5 A_2 B_13 E_266 --A_7 B_101 E_3576 -- endn_99999 endc_99999 NOTPDB CPL C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase--WD40-repeat-- 56112_57850_ 56112_57850_ E_3 4_2_2 3 A_114 B_971 E_9319 --A_19 B_52 E_3605 -- endn_99999 endc_99999 NOTPDB CPL Protein kinase-like (PK-like)--RING finger domain, C3HC4-- 46785_48179_ 46785_48179_ E_2 4_2_2 2 A_1241 B_7979 E_2143 --A_71 B_674 E_226 -- 51735_99999 endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--6-phosphogluconate dehydrogenase C-terminal domain-like-- 57716_50203_ 57716_50203_ E_2 4_2_2 2 A_72 B_426 E_2067 --A_24 B_163 E_47 -- endn_57716 57716_99999 NOTPDB CPL Glucocorticoid receptor-like (DNA-binding domain)--Bacterial enterotoxins-- 47912_56112_ 47912_56112_ E_11 3_2_1 11 E_91 --A_114 B_971 E_9319 -- endn_99999 endc NOTPDB CPL Wiscott-Aldrich syndrome protein, WASP, C-terminal domain--Protein kinase-like (PK-like)-- 53300_81995_ 53300_81995_ E_39 5_3_2 39 A_51 B_345 E_996 --A_1 B_2 E_111 -- endn_82919_81995 99999_81811 INPDB CPL vWA-like--beta-sandwich domain of Sec23/24-- 48425_50729_ 48425_50729_ E_54 5_3_2 54 B_10 E_152 --A_14 B_44 E_3057 -- 47226_endn_99999 endc_99999 NOTPDB CPL Sec7 domain--PH domain-like-- 52540_51045_ 52540_51045_ E_12 4_2_2 12 A_2129 B_14320 E_12913 --B_5 E_413 -- endn_50156 51045_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--WW domain-- 53300_49265_ 53300_49265_ E_24 6_3_3 24 A_51 B_345 E_996 --A_23 B_135 E_1734 -- endn_99999_49265 endc_53300_49265 NOTPDB CPL vWA-like--Fibronectin type III-- 50729_50729_ 50729_50729_ E_171 15_8_7 171 A_14 B_44 E_3057 --A_14 B_44 E_3057 -- 51045_endn_50729_50156_57863_48065_47031_99999 50729_50156_57863_47473_49562_endc_99999 INPDB RPT PH domain-like--PH domain-like-- 54334_57055_ 54334_57055_ E_15 3_2_1 15 A_3 B_50 E_36 --E_29 -- endn_99999 endc NOTPDB CPL Superantigen toxins, C-terminal domain--Agouti-related protein-- 57095_57095_ 57095_57095_ E_3 3_2_1 3 A_10 B_6 E_198 --A_10 B_6 E_198 -- endn_99999 endc NOTPDB RPT Scorpion toxin-like--Scorpion toxin-like-- 55637_55637_ 55637_55637_ E_3 4_2_2 3 B_5 E_43 --B_5 E_43 -- endn_55637 55637_99999 NOTPDB RPT Cell cycle regulatory proteins--Cell cycle regulatory proteins-- 54001_57667_ 54001_57667_ E_23 6_3_3 23 A_60 B_262 E_1838 --A_23 B_24 E_4849 -- 57667_54236_99999 57667_endc_99999 NOTPDB CPL Cysteine proteinases--C2H2 and C2HC zinc fingers-- 52058_48726_ 52058_48726_ E_98 7_3_4 98 A_6 B_143 E_2568 --A_14 B_78 E_4071 -- endn_52058_99999 48726_endc_49265_99999 NOTPDB CPL L domain-like--Immunoglobulin-- 52540_48403_ 52540_48403_ E_20 7_4_3 20 A_2129 B_14320 E_12913 --A_4 B_168 E_2348 -- endn_46458_82708_99999 52540_48403_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Ankyrin repeat-- 47587_56399_ 47587_56399_ E_39 5_3_2 39 A_2 B_4 E_40 --A_6 B_66 E_201 -- endn_48403_99999 endc_99999 INPDB CPL Domain of poly(ADP-ribose) polymerase--ADP-ribosylation-- 48081_47459_ 48081_47459_ E_2 3_1_2 2 A_19 B_5 E_5 --A_3 B_10 E_1147 -- endn endc_47459 NOTPDB CPL Methyl-coenzyme M reductase alpha and beta chain C-terminal domain--Helix-loop-helix DNA-binding domain-- 46689_51905_ 46689_51905_ E_49 3_1_2 49 A_246 B_4125 E_4002 --A_358 B_2910 E_1243 -- endn endc_99999 NOTPDB CPL Homeodomain-like--FAD/NAD(P)-binding domain-- 50978_47473_ 50978_47473_ E_2 3_2_1 2 A_7 B_101 E_3576 --A_51 B_190 E_2808 -- endn_99999 endc NOTPDB CPL WD40-repeat--EF-hand-- 48403_47769_ 48403_47769_ E_9 5_2_3 9 A_4 B_168 E_2348 --A_6 B_20 E_633 -- endn_48403 endc_56399_99999 NOTPDB CPL Ankyrin repeat--SAM/Pointed domain-- 50978_50960_ 50978_50960_ E_8 7_3_4 8 A_7 B_101 E_3576 --A_34 B_192 E_75 -- 50969_endn_99999 56024_endc_99999_48439 NOTPDB CPL WD40-repeat--TolB, C-terminal domain-- 56112_55073_ 56112_55073_ E_130 9_6_3 130 A_114 B_971 E_9319 --A_5 B_639 E_400 -- endn_53822_48317_55003_53955_99999 endc_55073_99999 NOTPDB CPL Protein kinase-like (PK-like)--Adenylyl and guanylyl cyclase catalytic domain-- 56801_56801_ 56801_56801_ E_2 4_2_2 2 A_139 B_882 E_563 --A_139 B_882 E_563 -- endn_99999 endc_99999 NOTPDB RPT Firefly luciferase-like--Firefly luciferase-like-- 56487_50494_ 56487_50494_ E_37 7_5_2 37 B_1 E_193 --A_19 B_482 E_1600 -- endn_57424_56487_49854_99999 endc_99999 NOTPDB CPL Scavenger receptor cysteine-rich (SRCR) domain--Trypsin-like serine proteases-- 55486_52058_ 55486_52058_ E_3 3_2_1 3 A_64 B_735 E_1617 --A_6 B_143 E_2568 -- endn_52058 endc NOTPDB CPL Metalloproteases ("zincins"), catalytic domain--L domain-like-- 57586_49265_ 57586_49265_ E_65 8_5_3 65 A_15 B_23 E_359 --A_23 B_135 E_1734 -- endn_57586_57184_57535_99999 endc_99999_49265 NOTPDB CPL TNF receptor-like--Fibronectin type III-- 48371_57850_ 48371_57850_ E_10 3_1_2 10 A_73 B_255 E_3951 --A_19 B_52 E_3605 -- endn 57845_endc NOTPDB CPL ARM repeat--RING finger domain, C3HC4-- 49265_53300_ 49265_53300_ E_17 11_5_6 17 A_23 B_135 E_1734 --A_51 B_345 E_996 -- endn_57184_53300_49265_99999 57196_49899_endc_99999_49265_57567 NOTPDB CPL Fibronectin type III--vWA-like-- 57440_50494_ 57440_50494_ E_49 7_6_1 49 A_6 B_6 E_228 --A_19 B_482 E_1600 -- 57196_endn_57440_57603_49899_99999 endc NOTPDB CPL Kringle-like--Trypsin-like serine proteases-- 52821_52799_ 52821_52799_ E_57 6_4_2 57 A_39 B_452 E_298 --A_16 B_112 E_1201 -- 57552_endn_52821_99999 endc_99999 NOTPDB CPL Rhodanese/Cell cycle control phosphatase--(Phosphotyrosine protein) phosphatases II-- 75569_50965_ 75569_50965_ E_4 3_2_1 4 A_6 B_1 E_32 --A_4 B_35 E_898 -- endn_99999 endc NOTPDB CPL Hypothetical protein MTH1020--Galactose oxidase, central domain-- 57667_49599_ 57667_49599_ E_7 6_3_3 7 A_23 B_24 E_4849 --A_1 E_685 -- 63393_57667_99999 57667_endc_99999 NOTPDB CPL C2H2 and C2HC zinc fingers--TRAF domain-like-- 53597_55831_ 53597_55831_ E_4 3_2_1 4 A_20 B_247 E_48 --A_8 B_75 E_32 -- endn_99999 endc NOTPDB CPL Dihydrofolate reductases--Thymidylate synthase/dCMP hydroxymethylase-- 57903_57701_ 57903_57701_ E_8 3_1_2 8 A_56 B_38 E_1435 --A_9 B_13 E_379 -- endn 57903_99999 NOTPDB CPL FYVE/PHD zinc finger--Zn2/Cys6 DNA-binding domain-- 48452_57850_ 48452_57850_ E_29 5_3_2 29 A_146 B_1937 E_3442 --A_19 B_52 E_3605 -- endn_99999_57850 endc_99999 NOTPDB CPL TPR-like--RING finger domain, C3HC4-- 52540_48340_ 52540_48340_ E_53 6_3_3 53 A_2129 B_14320 E_12913 --A_1 B_3 E_80 -- 52540_endn_99999 52540_endc_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain-- 47473_57889_ 47473_57889_ E_39 6_3_3 39 A_51 B_190 E_2808 --A_7 B_6 E_663 -- endn_48366_99999 endc_57889_99999 NOTPDB CPL EF-hand--Cysteine-rich domain-- 57196_49899_ 57196_49899_ E_119 11_5_6 119 A_2 B_7 E_2358 --A_22 B_208 E_1314 -- 57196_endn_49899_57184_99999 57196_48403_49899_endc_57535_99999 NOTPDB CPL EGF/Laminin--Concanavalin A-like lectins/glucanases-- 51735_46689_ 51735_46689_ E_2 4_2_2 2 A_993 B_8798 E_3827 --A_246 B_4125 E_4002 -- endn_99999 endc_51735 NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Homeodomain-like-- 50989_48371_ 50989_48371_ E_20 4_1_3 20 E_23 --A_73 B_255 E_3951 -- endn 48452_endc_99999 INPDB CPL Clathrin heavy-chain terminal domain--ARM repeat-- 47220_52540_ 47220_52540_ E_12 5_1_4 12 A_6 B_4 E_147 --A_2129 B_14320 E_12913 -- endn 52540_52058_endc_99999 NOTPDB CPL alpha-catenin/vinculin--P-loop containing nucleotide triphosphate hydrolases-- 50729_49562_ 50729_49562_ E_40 8_5_3 40 A_14 B_44 E_3057 --B_12 E_1627 -- endn_50729_48065_55550_99999 endc_99999_48350 NOTPDB CPL PH domain-like--C2 domain (Calcium/lipid-binding domain, CaLB)-- 82895_57196_ 82895_57196_ E_8 6_2_4 8 E_618 --A_2 B_7 E_2358 -- 82895_99999 57196_57184_99999_82895 NOTPDB CPL TSP-1 type 1 repeat--EGF/Laminin-- 48439_49594_ 48439_49594_ E_12 4_1_3 12 A_48 B_249 E_670 --B_5 E_16 -- endn 52058_endc_99999 INPDB CPL Protein prenylyltransferase--Rab geranylgeranyltransferase alpha-subunit, insert domain-- 48403_54160_ 48403_54160_ E_2 4_2_2 2 A_4 B_168 E_2348 --A_7 B_11 E_374 -- 54160_endn 54160_99999 NOTPDB CPL Ankyrin repeat--Chromo domain-like-- 50978_48452_ 50978_48452_ E_29 6_3_3 29 A_7 B_101 E_3576 --A_146 B_1937 E_3442 -- endn_50978_99999 48452_endc_99999 NOTPDB CPL WD40-repeat--TPR-like-- 53686_53686_ 53686_53686_ E_5 3_1_2 5 A_91 B_529 E_203 --A_91 B_529 E_203 -- endn endc_99999 NOTPDB RPT Tryptophan synthase beta subunit-like PLP-dependent enzymes--Tryptophan synthase beta subunit-like PLP-dependent enzymes-- 50911_57440_ 50911_57440_ E_6 4_2_2 6 E_86 --A_6 B_6 E_228 -- 99999_50911 99999_50911 NOTPDB CPL Mannose 6-phosphate receptor domain--Kringle-like-- 52833_54001_ 52833_54001_ E_3 3_1_2 3 A_220 B_2517 E_2068 --A_60 B_262 E_1838 -- endn endc_99999 NOTPDB CPL Thioredoxin-like--Cysteine proteinases-- 54768_54768_ 54768_54768_ E_90 11_5_6 90 A_18 B_198 E_397 --A_18 B_198 E_397 -- endn_54768_69065_56112_99999 52540_47113_54768_endc_56112_99999 INPDB RPT dsRNA-binding domain-like--dsRNA-binding domain-like-- 52374_53335_ 52374_53335_ E_2 3_1_2 2 A_247 B_1540 E_642 --A_733 B_3918 E_2070 -- endn endc_99999 NOTPDB CPL Nucleotidylyl transferase--S-adenosyl-L-methionine-dependent methyltransferases-- 55008_49329_ 55008_49329_ E_11 4_2_2 11 A_44 B_256 E_222 --A_4 B_72 E_102 -- endn_99999 endc_99999 INPDB CPL Metal-binding domain--Cu,Zn superoxide dismutase-like-- 55486_57196_ 55486_57196_ E_26 4_2_2 26 A_64 B_735 E_1617 --A_2 B_7 E_2358 -- endn_99999 49854_99999 NOTPDB CPL Metalloproteases ("zincins"), catalytic domain--EGF/Laminin-- 51658_51905_ 51658_51905_ E_2 3_1_2 2 A_102 B_575 E_65 --A_358 B_2910 E_1243 -- endn endc_99999 NOTPDB CPL Xylose isomerase-like--FAD/NAD(P)-binding domain-- 49599_54695_ 49599_54695_ E_248 13_8_5 248 A_1 E_685 --B_6 E_2078 -- endn_55797_47473_47162_56219_54695_49599_99999 49599_54695_endc_47781_99999 NOTPDB CPL TRAF domain-like--POZ domain-- 50814_57667_ 50814_57667_ E_3 4_2_2 3 A_14 B_98 E_391 --A_23 B_24 E_4849 -- endn_57667 57667_99999 NOTPDB CPL Lipocalins--C2H2 and C2HC zinc fingers-- 48695_54001_ 48695_54001_ E_2 4_2_2 2 A_18 B_378 E_163 --A_60 B_262 E_1838 -- endn_99999 49758_99999 NOTPDB CPL Multiheme cytochromes--Cysteine proteinases-- 48431_56968_ 48431_56968_ E_31 6_3_3 31 A_5 B_28 E_87 --A_1 B_2 E_55 -- 56968_endn_99999 56968_endc_99999 INPDB CPL Lipovitellin-phosvitin complex, superhelical domain--Lipovitellin-phosvitin complex; beta-sheet shell regions-- 48239_49410_ 48239_49410_ E_28 4_2_2 28 A_29 B_94 E_322 --A_1 B_2 E_109 -- endn_99999 50242_endc NOTPDB CPL Terpenoid cylases/Protein prenyltransferases--Alpha-macroglobulin receptor domain-- 50044_48350_ 50044_48350_ E_15 6_4_2 15 A_2 B_84 E_1671 --B_8 E_786 -- 64268_endn_99999_50886 55550_99999 NOTPDB CPL SH3-domain--GTPase activation domain, GAP-- 63451_63451_ 63451_63451_ E_2 3_1_2 2 A_1 B_8 E_56 --A_1 B_8 E_56 -- endn endc_99999 NOTPDB RPT LEM domain--LEM domain-- 63748_82199_ 63748_82199_ E_22 4_2_2 22 A_4 B_5 E_441 --A_2 B_29 E_692 -- 57903_99999 57903_99999 NOTPDB CPL Tudor/PWWP--SET domain-- 48695_57184_ 48695_57184_ E_9 4_2_2 9 A_18 B_378 E_163 --B_4 E_859 -- 52058_57184 56112_99999 NOTPDB CPL Multiheme cytochromes--Growth factor receptor domain-- 57424_82895_ 57424_82895_ E_5 5_2_3 5 E_497 --E_618 -- 57424_99999 57567_82895_99999 NOTPDB CPL LDL receptor-like module--TSP-1 type 1 repeat-- 47576_57716_ 47576_57716_ E_7 5_2_3 7 B_8 E_704 --A_72 B_426 E_2067 -- endn_99999 57716_endc_99999 NOTPDB CPL Calponin-homology domain, CH-domain--Glucocorticoid receptor-like (DNA-binding domain)-- 56112_49265_ 56112_49265_ E_2 4_2_2 2 A_114 B_971 E_9319 --A_23 B_135 E_1734 -- 57196_99999 47769_endc NOTPDB CPL Protein kinase-like (PK-like)--Fibronectin type III-- 57414_50494_ 57414_50494_ E_7 3_2_1 7 B_5 E_136 --A_19 B_482 E_1600 -- 57414_99999 endc NOTPDB CPL Hairpin loop containing domain-like--Trypsin-like serine proteases-- 57095_57196_ 57095_57196_ E_16 5_2_3 16 A_10 B_6 E_198 --A_2 B_7 E_2358 -- endn_99999 57196_57184_endc NOTPDB CPL Scorpion toxin-like--EGF/Laminin-- 50156_50729_ 50156_50729_ E_16 6_2_4 16 A_28 B_534 E_1380 --A_14 B_44 E_3057 -- endn_99999 53901_50729_endc_99999 NOTPDB CPL PDZ domain-like--PH domain-like-- 57467_57610_ 57467_57610_ E_13 6_3_3 13 A_2 B_8 E_358 --A_1 B_1 E_118 -- endn_47473_99999 47473_endc_99999 NOTPDB CPL Ovomucoid/PCI-1 like inhibitors--Thyroglobulin type-1 domain-- 55486_51101_ 55486_51101_ E_2 3_2_1 2 A_64 B_735 E_1617 --B_5 E_106 -- 99999_55486 endc NOTPDB CPL Metalloproteases ("zincins"), catalytic domain--Mannose-binding lectins-- 69848_49785_ 69848_49785_ E_11 4_2_2 11 E_59 --A_10 B_366 E_724 -- endn_49854 endc_99999 NOTPDB CPL LCCL domain--Galactose-binding domain-like-- 54928_57850_ 54928_57850_ E_9 4_2_2 9 A_6 B_60 E_3471 --A_19 B_52 E_3605 -- endn_99999 57863_99999 NOTPDB CPL RNA-binding domain, RBD--RING finger domain, C3HC4-- 57467_57196_ 57467_57196_ E_18 8_4_4 18 A_2 B_8 E_358 --A_2 B_7 E_2358 -- endn_57467_49265_99999 57196_48726_57467_99999 NOTPDB CPL Ovomucoid/PCI-1 like inhibitors--EGF/Laminin-- 54928_57756_ 54928_57756_ E_56 5_3_2 56 A_6 B_60 E_3471 --A_11 B_19 E_1238 -- 54928_endn_99999 endc_99999 NOTPDB CPL RNA-binding domain, RBD--Retrovirus zinc finger-like domains-- 81383_63825_ 81383_63825_ E_3 3_1_2 3 B_8 E_2068 --A_7 B_35 E_205 -- endn endc_99999 NOTPDB CPL F-box domain--Low density lipoprotein (LDL) receptor YWTD domain-- 50729_48350_ 50729_48350_ E_68 7_4_3 68 A_14 B_44 E_3057 --B_8 E_786 -- 51045_endn_50729_99999 57863_endc_99999 NOTPDB CPL PH domain-like--GTPase activation domain, GAP-- 57567_53098_ 57567_53098_ E_4 3_2_1 4 E_254 --A_290 B_2494 E_2335 -- endn_99999 endc NOTPDB CPL Serine proterase inhibitors--Ribonuclease H-like-- 51206_48366_ 51206_48366_ E_7 4_3_1 7 A_2 B_447 E_467 --E_271 -- endn_46785_99999 endc NOTPDB CPL cAMP-binding domain-like--Ras GEF-- 49464_48726_ 49464_48726_ E_4 5_3_2 4 A_30 B_195 E_96 --A_14 B_78 E_4071 -- 57262_82895_99999 57392_99999 NOTPDB CPL Carboxypeptidase D, a regulatory domain--Immunoglobulin-- 82671_57424_ 82671_57424_ E_5 3_1_2 5 E_73 --E_497 -- endn 48726_49854 NOTPDB CPL SEA domain--LDL receptor-like module-- 52540_57850_ 52540_57850_ E_4 5_2_3 4 A_2129 B_14320 E_12913 --A_19 B_52 E_3605 -- endn_99999 52540_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--RING finger domain, C3HC4-- 48097_48097_ 48097_48097_ E_16 5_2_3 16 A_2 B_9 E_367 --A_2 B_9 E_367 -- endn_99999 endc_48097_99999 NOTPDB RPT Regulator of G-protein signalling, RGS--Regulator of G-protein signalling, RGS-- 56112_51445_ 56112_51445_ E_3 3_2_1 3 A_114 B_971 E_9319 --A_89 B_1646 E_1474 -- 51445_99999 endc NOTPDB CPL Protein kinase-like (PK-like)--(Trans)glycosidases-- 54236_49879_ 54236_49879_ E_9 4_2_2 9 A_18 B_81 E_1815 --A_4 B_172 E_486 -- endn_99999 endc_99999 NOTPDB CPL Ubiquitin-like--SMAD/FHA domain-- 52833_57938_ 52833_57938_ E_13 5_4_1 13 A_220 B_2517 E_2068 --A_19 B_61 E_147 -- 46626_endn_50156_99999 endc NOTPDB CPL Thioredoxin-like--Cysteine-rich domain of the chaperone protein DnaJ.-- 50203_57716_ 50203_57716_ E_2 3_2_1 2 A_24 B_163 E_47 --A_72 B_426 E_2067 -- endn_57716 endc NOTPDB CPL Bacterial enterotoxins--Glucocorticoid receptor-like (DNA-binding domain)-- 49854_57184_ 49854_57184_ E_6 3_1_2 6 B_1 E_636 --B_4 E_859 -- endn 57196_99999 NOTPDB CPL Spermadhesin, CUB domain--Growth factor receptor domain-- 49265_57467_ 49265_57467_ E_7 3_1_2 7 A_23 B_135 E_1734 --A_2 B_8 E_358 -- endn 57196_48726 NOTPDB CPL Fibronectin type III--Ovomucoid/PCI-1 like inhibitors-- 49854_55486_ 49854_55486_ E_2 3_1_2 2 B_1 E_636 --A_64 B_735 E_1617 -- endn 49854_82895 NOTPDB CPL Spermadhesin, CUB domain--Metalloproteases ("zincins"), catalytic domain-- 57256_57362_ 57256_57362_ E_8 5_2_3 8 E_63 --A_1 B_1 E_226 -- endn_99999 57256_endc_99999 NOTPDB CPL Elafin-like--BPTI-like-- 51621_52540_ 51621_52540_ E_2 3_1_2 2 A_75 B_609 E_182 --A_2129 B_14320 E_12913 -- endn endc_99999 NOTPDB CPL Phosphoenolpyruvate/pyruvate domain--P-loop containing nucleotide triphosphate hydrolases-- 50729_56024_ 50729_56024_ E_18 4_2_2 18 A_14 B_44 E_3057 --A_32 B_314 E_180 -- 64268_99999 56024_99999 NOTPDB CPL PH domain-like--Phospholipase D/nuclease-- 48371_53474_ 48371_53474_ E_3 3_2_1 3 A_73 B_255 E_3951 --A_141 B_2949 E_2909 -- endn_99999 endc NOTPDB CPL ARM repeat--alpha/beta-Hydrolases-- 48670_48097_ 48670_48097_ E_33 5_3_2 33 A_1 B_3 E_122 --A_2 B_9 E_367 -- endn_46785_99999 endc_99999 NOTPDB CPL Transducin (heterotrimeric G protein), gamma chain--Regulator of G-protein signalling, RGS-- 57424_48726_ 57424_48726_ E_20 6_3_3 20 E_497 --A_14 B_78 E_4071 -- 82671_endn_57424 57196_57424_99999 NOTPDB CPL LDL receptor-like module--Immunoglobulin-- 50156_49562_ 50156_49562_ E_20 4_2_2 20 A_28 B_534 E_1380 --B_12 E_1627 -- endn_99999 endc_99999 NOTPDB CPL PDZ domain-like--C2 domain (Calcium/lipid-binding domain, CaLB)-- 49785_57196_ 49785_57196_ E_2 4_2_2 2 A_10 B_366 E_724 --A_2 B_7 E_2358 -- 57196_endn 56112_57535 NOTPDB CPL Galactose-binding domain-like--EGF/Laminin-- 57302_56112_ 57302_56112_ E_4 3_1_2 4 A_3 B_7 E_578 --A_114 B_971 E_9319 -- endn endc_99999 NOTPDB CPL Snake toxin-like--Protein kinase-like (PK-like)-- 82927_49599_ 82927_49599_ E_2 4_2_2 2 E_76 --A_1 E_685 -- endn_57850 49599_99999 NOTPDB CPL Cysteine-rich DNA binding domain, (DM domain)--TRAF domain-like-- 57567_57501_ 57567_57501_ E_2 4_2_2 2 E_254 --A_1 B_17 E_479 -- 57283_57567 endc_99999 NOTPDB CPL Serine proterase inhibitors--Cystine-knot cytokines-- 57184_56112_ 57184_56112_ E_18 7_5_2 18 B_4 E_859 --A_114 B_971 E_9319 -- 57196_endn_52058_57184_48695 endc_99999 NOTPDB CPL Growth factor receptor domain--Protein kinase-like (PK-like)-- 49348_55711_ 49348_55711_ E_41 4_2_2 41 A_3 B_8 E_116 --E_55 -- endn_99999 endc_99999 INPDB CPL Clathrin adaptor appendage domain--Clathrin adaptor appendage domain-- 50249_53098_ 50249_53098_ E_2 4_2_2 2 A_390 B_2734 E_1438 --A_290 B_2494 E_2335 -- endn_99999 endc_99999 NOTPDB CPL Nucleic acid-binding proteins--Ribonuclease H-like-- 49329_49329_ 49329_49329_ E_6 5_3_2 6 A_4 B_72 E_102 --A_4 B_72 E_102 -- endn_49329_99999 endc_49329 NOTPDB RPT Cu,Zn superoxide dismutase-like--Cu,Zn superoxide dismutase-like-- 55486_57552_ 55486_57552_ E_140 6_4_2 140 A_64 B_735 E_1617 --B_1 E_150 -- 50249_endn_55486_99999 endc_99999 NOTPDB CPL Metalloproteases ("zincins"), catalytic domain--Blood coagulation inhibitor (disintegrin)-- 50729_47473_ 50729_47473_ E_92 8_4_4 92 A_14 B_44 E_3057 --A_51 B_190 E_2808 -- endn_50729_48371_99999 endc_47473_51695_99999 NOTPDB CPL PH domain-like--EF-hand-- 50965_54695_ 50965_54695_ E_8 5_2_3 8 A_4 B_35 E_898 --B_6 E_2078 -- endn_99999 54695_endc_99999 NOTPDB CPL Galactose oxidase, central domain--POZ domain-- 57256_49265_ 57256_49265_ E_7 5_2_3 7 E_63 --A_23 B_135 E_1734 -- endn_99999 endc_99999_49265 NOTPDB CPL Elafin-like--Fibronectin type III-- 57756_50630_ 57756_50630_ E_114 7_2_5 114 A_11 B_19 E_1238 --A_15 B_69 E_1046 -- endn_99999 50630_56672_endc_53098_99999 NOTPDB CPL Retrovirus zinc finger-like domains--Acid proteases-- 55550_55550_ 55550_55550_ E_57 12_6_6 57 A_4 B_15 E_910 --A_4 B_15 E_910 -- endn_50729_48403_55387_51695_99999 52799_50729_50044_endc_56112_99999 INPDB RPT SH2 domain--SH2 domain-- 54236_52540_ 54236_52540_ E_5 6_3_3 5 A_18 B_81 E_1815 --A_2129 B_14320 E_12913 -- endn_47576_99999 52540_endc_99999 NOTPDB CPL Ubiquitin-like--P-loop containing nucleotide triphosphate hydrolases-- 57184_63825_ 57184_63825_ E_9 6_3_3 9 B_4 E_859 --A_7 B_35 E_205 -- 57196_57424_99999 63825_63829_99999 NOTPDB CPL Growth factor receptor domain--Low density lipoprotein (LDL) receptor YWTD domain-- 48508_81321_ 48508_81321_ E_3 3_2_1 3 A_1 B_10 E_1172 --A_7 B_20 E_8234 -- 57716_99999 endc NOTPDB CPL Nuclear receptor ligand-binding domain--Family A G protein-coupled receptor-like-- 55486_50494_ 55486_50494_ E_2 3_1_2 2 A_64 B_735 E_1617 --A_19 B_482 E_1600 -- endn 50156_endc NOTPDB CPL Metalloproteases ("zincins"), catalytic domain--Trypsin-like serine proteases-- 47220_47220_ 47220_47220_ E_39 6_3_3 39 A_6 B_4 E_147 --A_6 B_4 E_147 -- 47220_endn_99999 47220_endc_99999 INPDB RPT alpha-catenin/vinculin--alpha-catenin/vinculin-- 52047_47473_ 52047_47473_ E_2 4_2_2 2 A_9 B_93 E_2576 --A_51 B_190 E_2808 -- 52047_endn endc_99999 NOTPDB CPL RNI-like--EF-hand-- 49562_52151_ 49562_52151_ E_6 4_2_2 6 B_12 E_1627 --B_266 E_103 -- endn_99999 endc_99999 INPDB CPL C2 domain (Calcium/lipid-binding domain, CaLB)--FabD/lysophospholipase-like-- 57535_57196_ 57535_57196_ E_25 11_5_6 25 B_3 E_582 --A_2 B_7 E_2358 -- 57196_endn_48113_57535_99999 57196_49785_48726_endc_57535_99999 NOTPDB CPL Complement control module/SCR domain--EGF/Laminin-- 49562_48371_ 49562_48371_ E_62 5_3_2 62 B_12 E_1627 --A_73 B_255 E_3951 -- endn_54236_99999 endc_56112 INPDB CPL C2 domain (Calcium/lipid-binding domain, CaLB)--ARM repeat-- 57196_50965_ 57196_50965_ E_24 6_3_3 24 A_2 B_7 E_2358 --A_4 B_35 E_898 -- 57196_49854_99999 56436_endc_99999 NOTPDB CPL EGF/Laminin--Galactose oxidase, central domain-- 48403_82199_ 48403_82199_ E_21 4_2_2 21 A_4 B_168 E_2348 --A_2 B_29 E_692 -- endn_99999 endc_99999 NOTPDB CPL Ankyrin repeat--SET domain-- 48726_56112_ 48726_56112_ E_30 5_3_2 30 A_14 B_78 E_4071 --A_114 B_971 E_9319 -- endn_48726_99999 endc_99999 NOTPDB CPL Immunoglobulin--Protein kinase-like (PK-like)-- 53774_48403_ 53774_48403_ E_11 4_2_2 11 A_21 B_82 E_29 --A_4 B_168 E_2348 -- endn_99999 endc_99999 NOTPDB CPL Glutaminase/Asparaginase--Ankyrin repeat-- 81383_54518_ 81383_54518_ E_23 4_2_2 23 B_8 E_2068 --B_3 E_73 -- endn_99999 endc_99999 NOTPDB CPL F-box domain--Transcriptional factor tubby, C-terminal domain-- 48452_46689_ 48452_46689_ E_2 3_1_2 2 A_146 B_1937 E_3442 --A_246 B_4125 E_4002 -- endn endc_99999 NOTPDB CPL TPR-like--Homeodomain-like-- 53633_55194_ 53633_55194_ E_2 4_2_2 2 A_84 B_449 E_69 --A_2 B_102 E_30 -- endn_54713 64005_endc NOTPDB CPL Carbamate kinase-like--Ribosome recycling factor, RRF-- 54928_53474_ 54928_53474_ E_2 3_1_2 2 A_6 B_60 E_3471 --A_141 B_2949 E_2909 -- endn endc_99999 NOTPDB CPL RNA-binding domain, RBD--alpha/beta-Hydrolases-- 57467_50494_ 57467_50494_ E_15 5_3_2 15 A_2 B_8 E_358 --A_19 B_482 E_1600 -- endn_57184_99999 50156_endc NOTPDB CPL Ovomucoid/PCI-1 like inhibitors--Trypsin-like serine proteases-- 56112_50729_ 56112_50729_ E_3 4_3_1 3 A_114 B_971 E_9319 --A_14 B_44 E_3057 -- endn_50729_48097 endc NOTPDB CPL Protein kinase-like (PK-like)--PH domain-like-- 82671_49854_ 82671_49854_ E_9 4_2_2 9 E_73 --B_1 E_636 -- endn_99999 endc_49854 NOTPDB CPL SEA domain--Spermadhesin, CUB domain-- 48403_54695_ 48403_54695_ E_13 4_2_2 13 A_4 B_168 E_2348 --B_6 E_2078 -- endn_99999 54695_99999 NOTPDB CPL Ankyrin repeat--POZ domain-- 54403_54001_ 54403_54001_ E_8 4_3_1 8 A_5 B_15 E_194 --A_60 B_262 E_1838 -- 54403_endn_99999 endc NOTPDB CPL Cystatin/monellin--Cysteine proteinases-- 81321_57667_ 81321_57667_ E_2 3_1_2 2 A_7 B_20 E_8234 --A_23 B_24 E_4849 -- endn 57667_99999 NOTPDB CPL Family A G protein-coupled receptor-like--C2H2 and C2HC zinc fingers-- 56436_48726_ 56436_48726_ E_3 4_2_2 3 A_2 B_62 E_1409 --A_14 B_78 E_4071 -- 99999_49265 48726_endc NOTPDB CPL C-type lectin-like--Immunoglobulin-- 52058_48371_ 52058_48371_ E_6 4_2_2 6 A_6 B_143 E_2568 --A_73 B_255 E_3951 -- endn_99999 endc_99999 NOTPDB CPL L domain-like--ARM repeat-- 47473_56112_ 47473_56112_ E_3 4_2_2 3 A_51 B_190 E_2808 --A_114 B_971 E_9319 -- 57095_99999 endc_99999 NOTPDB CPL EF-hand--Protein kinase-like (PK-like)-- 57903_57903_ 57903_57903_ E_131 24_11_13 131 A_56 B_38 E_1435 --A_56 B_38 E_1435 -- endn_57667_50729_63763_82199_63748_57903_57889_46785_99999_57850 52540_54160_53335_57667_56204_endc_82199_55729_57716_57903_57889_47370_99999 NOTPDB RPT FYVE/PHD zinc finger--FYVE/PHD zinc finger-- 54236_63491_ 54236_63491_ E_17 4_2_2 17 A_18 B_81 E_1815 --A_3 B_8 E_60 -- endn_99999 endc_99999 NOTPDB CPL Ubiquitin-like--BAG domain-- 57535_81321_ 57535_81321_ E_9 3_2_1 9 B_3 E_582 --A_7 B_20 E_8234 -- endn_99999 endc NOTPDB CPL Complement control module/SCR domain--Family A G protein-coupled receptor-like-- 50370_53448_ 50370_53448_ E_3 4_2_2 3 B_67 E_219 --A_346 B_1868 E_1125 -- endn_99999 50370_99999 NOTPDB CPL Ricin B-like lectins--Nucleotide-diphospho-sugar transferases-- 46934_46934_ 46934_46934_ E_24 7_4_3 24 A_21 B_114 E_420 --A_21 B_114 E_420 -- endn_54001_48452_99999 46934_endc_99999 NOTPDB RPT UBA-like--UBA-like-- 48726_52129_ 48726_52129_ E_10 6_4_2 10 A_14 B_78 E_4071 --A_4 B_70 E_188 -- 47986_endn_48726_99999 endc_99999 NOTPDB CPL Immunoglobulin--Caspase-like-- 50729_57863_ 50729_57863_ E_84 10_6_4 84 A_14 B_44 E_3057 --B_10 E_253 -- endn_47762_48403_50729_47240_99999 52540_48403_endc_99999 NOTPDB CPL PH domain-like--Pyk2-associated protein beta ARF-GAP domain-- 47090_55486_ 47090_55486_ E_69 6_3_3 69 A_5 B_242 E_88 --A_64 B_735 E_1617 -- 56436_endn_99999 57440_50923_endc INPDB CPL PGBD-like--Metalloproteases ("zincins"), catalytic domain-- 46955_63763_ 46955_63763_ E_18 4_2_2 18 A_55 B_784 E_148 --E_86 -- endn_99999 endc_99999 NOTPDB CPL Putative DNA-binding domain--SAND domain-like-- 47113_48371_ 47113_48371_ E_5 3_1_2 5 A_42 B_30 E_1066 --A_73 B_255 E_3951 -- endn endc_99999 NOTPDB CPL Histone-fold--ARM repeat-- 69318_69179_ 69318_69179_ E_106 8_4_4 106 A_6 B_79 E_181 --A_2 B_11 E_172 -- endn_69179_53300_99999 69179_endc_53300_99999 INPDB CPL Integrin alpha N-terminal domain--Integrin domains-- 81296_54001_ 81296_54001_ E_50 4_2_2 50 A_40 B_404 E_1207 --A_60 B_262 E_1838 -- endn_99999 49309_endc INPDB CPL E set domains--Cysteine proteinases-- 48403_50044_ 48403_50044_ E_13 4_2_2 13 A_4 B_168 E_2348 --A_2 B_84 E_1671 -- endn_99999 endc_99999 NOTPDB CPL Ankyrin repeat--SH3-domain-- 46785_51206_ 46785_51206_ E_18 5_3_2 18 A_1241 B_7979 E_2143 --A_2 B_447 E_467 -- 51206_endn_99999 48366_99999 INPDB CPL "Winged helix" DNA-binding domain--cAMP-binding domain-like-- 56487_57424_ 56487_57424_ E_14 6_3_3 14 B_1 E_193 --E_497 -- endn_57424_57467 57424_50494_56487 NOTPDB CPL Scavenger receptor cysteine-rich (SRCR) domain--LDL receptor-like module-- 49265_49899_ 49265_49899_ E_7 4_2_2 7 A_23 B_135 E_1734 --A_22 B_208 E_1314 -- endn_49265 55486_99999 NOTPDB CPL Fibronectin type III--Concanavalin A-like lectins/glucanases-- 57196_50969_ 57196_50969_ E_13 8_4_4 13 A_2 B_7 E_2358 --A_24 B_218 E_336 -- 57196_57586_63825_99999 57196_63825_endc_99999 NOTPDB CPL EGF/Laminin--YVTN repeat-like/Quinoprotein amine dehydrogenase-- 81383_46785_ 81383_46785_ E_2 3_1_2 2 B_8 E_2068 --A_1241 B_7979 E_2143 -- endn 50985_99999 NOTPDB CPL F-box domain--"Winged helix" DNA-binding domain-- 52029_48592_ 52029_48592_ E_10 3_1_2 10 A_38 B_142 E_269 --A_38 B_136 E_258 -- endn endc_99999 NOTPDB CPL GroEL apical domain-like--GroEL equatorial domain-like chaperone equatorial domain-- 52113_52540_ 52113_52540_ E_12 5_2_3 12 A_1 B_117 E_366 --A_2129 B_14320 E_12913 -- endn_99999 52540_endc_99999 NOTPDB CPL BRCT domain--P-loop containing nucleotide triphosphate hydrolases-- 52047_54427_ 52047_54427_ E_6 5_2_3 6 A_9 B_93 E_2576 --A_11 B_446 E_248 -- 54928_99999 46934_endc_99999 NOTPDB CPL RNI-like--NTF2-like-- 57184_49265_ 57184_49265_ E_24 6_2_4 24 B_4 E_859 --A_23 B_135 E_1734 -- endn_49785 endc_53300_99999_49265 NOTPDB CPL Growth factor receptor domain--Fibronectin type III-- 46458_46458_ 46458_46458_ E_2 4_2_2 2 A_8 B_250 E_257 --A_8 B_250 E_257 -- endn_46458 46458_endc INPDB RPT Globin-like--Globin-like-- 48065_50978_ 48065_50978_ E_2 3_2_1 2 A_3 B_7 E_597 --A_7 B_101 E_3576 -- endn_48065 endc NOTPDB CPL DBL homology domain (DH-domain)--WD40-repeat-- 50729_50044_ 50729_50044_ E_38 6_3_3 38 A_14 B_44 E_3057 --A_2 B_84 E_1671 -- endn_48065_99999 endc_55550_99999 NOTPDB CPL PH domain-like--SH3-domain-- 49854_82895_ 49854_82895_ E_4 4_2_2 4 B_1 E_636 --E_618 -- 49854_55486 99999_82895 NOTPDB CPL Spermadhesin, CUB domain--TSP-1 type 1 repeat-- 57567_57283_ 57567_57283_ E_47 8_4_4 47 E_254 --E_147 -- endn_82895_57567_99999 endc_82895_57567_99999 NOTPDB CPL Serine proterase inhibitors--PMP inhibitors-- 50985_56204_ 50985_56204_ E_2 3_2_1 2 B_15 E_285 --A_2 E_276 -- endn_99999 endc NOTPDB CPL RCC1/BLIP-II--Ubiquitin-protein ligase E3a, Hect catalytic domain (E6ap)-- 52047_52075_ 52047_52075_ E_13 8_3_5 13 A_9 B_93 E_2576 --B_3 E_104 -- 52540_81383_99999 52047_endc_52200_99999_56112 NOTPDB CPL RNI-like--Outer arm dynein light chain 1-- 56112_47769_ 56112_47769_ E_21 5_3_2 21 A_114 B_971 E_9319 --A_6 B_20 E_633 -- endn_49265_99999 endc_99999 NOTPDB CPL Protein kinase-like (PK-like)--SAM/Pointed domain-- 57196_57535_ 57196_57535_ E_33 12_9_3 33 A_2 B_7 E_2358 --B_3 E_582 -- 56436_endn_57184_49854_57535_57196_49785_57492_99999 57196_99999_57535 NOTPDB CPL EGF/Laminin--Complement control module/SCR domain-- 48371_50729_ 48371_50729_ E_5 5_2_3 5 A_73 B_255 E_3951 --A_14 B_44 E_3057 -- endn_54236 47473_endc_99999 NOTPDB CPL ARM repeat--PH domain-like-- 57535_49785_ 57535_49785_ E_9 6_3_3 9 B_3 E_582 --A_10 B_366 E_724 -- endn_99999_57535 56436_57184_99999 NOTPDB CPL Complement control module/SCR domain--Galactose-binding domain-like-- 53748_53335_ 53748_53335_ E_2 3_2_1 2 A_18 B_98 E_37 --A_733 B_3918 E_2070 -- endn_99999 endc NOTPDB CPL Phosphoglycerate kinase--S-adenosyl-L-methionine-dependent methyltransferases-- 48371_55008_ 48371_55008_ E_3 3_1_2 3 A_73 B_255 E_3951 --A_44 B_256 E_222 -- endn endc_99999 NOTPDB CPL ARM repeat--Metal-binding domain-- 56601_48403_ 56601_48403_ E_20 6_3_3 20 A_15 B_1220 E_127 --A_4 B_168 E_2348 -- endn_47473_99999 56601_endc_99999 NOTPDB CPL beta-Lactamase/D-ala carboxypeptidase--Ankyrin repeat-- 53098_57850_ 53098_57850_ E_17 6_2_4 17 A_290 B_2494 E_2335 --A_19 B_52 E_3605 -- endn_99999 57889_53098_57850_99999 NOTPDB CPL Ribonuclease H-like--RING finger domain, C3HC4-- 57667_57825_ 57667_57825_ E_7 5_2_3 7 A_23 B_24 E_4849 --A_16 B_21 E_30 -- 57667_99999 57667_endc_99999 NOTPDB CPL C2H2 and C2HC zinc fingers--Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain-- 57716_48695_ 57716_48695_ E_25 6_3_3 25 A_72 B_426 E_2067 --A_18 B_378 E_163 -- endn_57716_99999 57716_50156_endc NOTPDB CPL Glucocorticoid receptor-like (DNA-binding domain)--Multiheme cytochromes-- 57256_57467_ 57256_57467_ E_4 3_1_2 4 E_63 --A_2 B_8 E_358 -- endn 48726_99999 NOTPDB CPL Elafin-like--Ovomucoid/PCI-1 like inhibitors-- 54236_74924_ 54236_74924_ E_7 3_2_1 7 A_18 B_81 E_1815 --B_2 E_135 -- endn_99999 endc NOTPDB CPL Ubiquitin-like--Cap-Gly domain-- 81296_49503_ 81296_49503_ E_3 3_2_1 3 A_40 B_404 E_1207 --A_81 B_368 E_450 -- 81296_99999 endc NOTPDB CPL E set domains--Cupredoxins-- 52058_81321_ 52058_81321_ E_9 5_3_2 9 A_6 B_143 E_2568 --A_7 B_20 E_8234 -- endn_52058_99999 endc_99999 NOTPDB CPL L domain-like--Family A G protein-coupled receptor-like-- 56512_52218_ 56512_52218_ E_27 4_2_2 27 B_12 E_33 --A_110 B_706 E_157 -- endn_99999 63380_99999 NOTPDB CPL Nitric oxide (NO) synthase oxygenase domain--Flavoproteins-- 57535_53822_ 57535_53822_ E_12 4_2_2 12 B_3 E_582 --A_49 B_1285 E_794 -- endn_57535 endc_99999 NOTPDB CPL Complement control module/SCR domain--Periplasmic binding protein-like I-- 48726_49265_ 48726_49265_ E_482 14_8_6 482 A_14 B_78 E_4071 --A_23 B_135 E_1734 -- 57196_52047_endn_52058_48726_57184_49265_99999 53383_48726_endc_49265_56112_99999 INPDB CPL Immunoglobulin--Fibronectin type III-- 54495_52833_ 54495_52833_ E_2 3_2_1 2 A_1 B_25 E_676 --A_220 B_2517 E_2068 -- endn_99999 endc NOTPDB CPL UBC-like--Thioredoxin-like-- 57362_50242_ 57362_50242_ E_9 3_2_1 9 A_1 B_1 E_226 --A_2 B_2 E_148 -- 57362_99999 endc NOTPDB CPL BPTI-like--TIMP-like-- 48508_57716_ 48508_57716_ E_16 7_4_3 16 A_1 B_10 E_1172 --A_72 B_426 E_2067 -- endn_57716_48508_99999 48508_endc_99999 NOTPDB CPL Nuclear receptor ligand-binding domain--Glucocorticoid receptor-like (DNA-binding domain)-- 57196_56496_ 57196_56496_ E_22 6_3_3 22 A_2 B_7 E_2358 --A_2 B_3 E_372 -- endn_49899_99999 49899_endc_99999 NOTPDB CPL EGF/Laminin--Fibrinogen C-terminal domain-like-- 57667_57667_ 57667_57667_ E_3550 49_35_14 3550 A_23 B_24 E_4849 --A_23 B_24 E_4849 -- 47380_54001_63763_50249_51351_56672_57903_48726_57850_54984_57586_57783_52467_50939_99999_endn_82199_54862_54211_55103_47862_57825_50814_81321_57667_57774_53098_53383_81271_56235_49599_56091_53920_57501_56327 51126_54001_53254_57667_48508_57774_57783_endc_53098_49599_57903_48726_50939_99999 INPDB RPT C2H2 and C2HC zinc fingers--C2H2 and C2HC zinc fingers-- 57535_50494_ 57535_50494_ E_33 5_3_2 33 B_3 E_582 --A_19 B_482 E_1600 -- endn_99999_57535 endc_99999 INPDB CPL Complement control module/SCR domain--Trypsin-like serine proteases-- 81383_50998_ 81383_50998_ E_6 4_2_2 6 B_8 E_2068 --A_73 B_392 E_284 -- endn_50965 endc_99999 NOTPDB CPL F-box domain--Quinoprotein alcohol dehydrogenase-like-- 57424_57414_ 57424_57414_ E_3 4_2_2 3 E_497 --B_5 E_136 -- 57440_57424 57424_99999 NOTPDB CPL LDL receptor-like module--Hairpin loop containing domain-like-- 57567_82895_ 57567_82895_ E_7 7_3_4 7 E_254 --E_618 -- 57567_99999_82895 57603_57567_99999_82895 NOTPDB CPL Serine proterase inhibitors--TSP-1 type 1 repeat-- 48371_47769_ 48371_47769_ E_11 6_3_3 11 A_73 B_255 E_3951 --A_6 B_20 E_633 -- endn_99999_82693 47769_endc_52200 NOTPDB CPL ARM repeat--SAM/Pointed domain-- 54236_48371_ 54236_48371_ E_14 5_2_3 14 A_18 B_81 E_1815 --A_73 B_255 E_3951 -- endn_99999 50729_endc_99999 NOTPDB CPL Ubiquitin-like--ARM repeat-- 69959_57467_ 69959_57467_ E_3 4_2_2 3 B_3 E_3 --A_2 B_8 E_358 -- 69959_endn 69959_endc NOTPDB CPL Serine proteinase inhibitor lekti, domain one--Ovomucoid/PCI-1 like inhibitors-- 81321_54695_ 81321_54695_ E_2 3_1_2 2 A_7 B_20 E_8234 --B_6 E_2078 -- endn endc_99999 NOTPDB CPL Family A G protein-coupled receptor-like--POZ domain-- 81415_56399_ 81415_56399_ E_7 3_2_1 7 B_4 E_28 --A_6 B_66 E_201 -- endn_99999 endc NOTPDB CPL Mitochondrial cytochrome c oxidase subunit VIc--ADP-ribosylation-- 50974_50969_ 50974_50969_ E_2 4_2_2 2 A_28 B_71 E_18 --A_24 B_218 E_336 -- endn_50978 endc_99999 NOTPDB CPL Nitrous oxide reductase, N-terminal domain--YVTN repeat-like/Quinoprotein amine dehydrogenase-- 48371_49562_ 48371_49562_ E_2 3_2_1 2 A_73 B_255 E_3951 --B_12 E_1627 -- endn_48371 endc NOTPDB CPL ARM repeat--C2 domain (Calcium/lipid-binding domain, CaLB)-- 51197_47473_ 51197_47473_ E_8 4_1_3 8 A_15 B_244 E_617 --A_51 B_190 E_2808 -- endn 51197_endc_99999 NOTPDB CPL Clavaminate synthase-like--EF-hand-- 56487_49854_ 56487_49854_ E_6 8_4_4 6 B_1 E_193 --B_1 E_636 -- endn_56487_49854_99999 56487_endc_49854_99999 NOTPDB CPL Scavenger receptor cysteine-rich (SRCR) domain--Spermadhesin, CUB domain-- 52087_48350_ 52087_48350_ E_15 4_2_2 15 B_5 E_404 --B_8 E_786 -- endn_99999 endc_99999 NOTPDB CPL C-terminal domain of phosphatidylinositol transfer protein sec14p--GTPase activation domain, GAP-- 56112_52799_ 56112_52799_ E_9 5_2_3 9 A_114 B_971 E_9319 --A_16 B_112 E_1201 -- endn_99999 endc_49562_99999 NOTPDB CPL Protein kinase-like (PK-like)--(Phosphotyrosine protein) phosphatases II-- 48239_48576_ 48239_48576_ E_71 7_3_4 71 A_29 B_94 E_322 --A_32 B_270 E_227 -- 48239_endn_99999 48239_endc_48576_99999 INPDB CPL Terpenoid cylases/Protein prenyltransferases--Terpenoid synthases-- 47353_57756_ 47353_57756_ E_27 5_3_2 27 A_3 B_6 E_153 --A_11 B_19 E_1238 -- endn_47943_99999 endc_99999 NOTPDB CPL Retrovirus capsid protein C-terminal domain--Retrovirus zinc finger-like domains-- 46585_52540_ 46585_52540_ E_12 3_2_1 12 B_6 E_126 --A_2129 B_14320 E_12913 -- endn_99999 endc NOTPDB CPL Effector domain of the protein kinase pkn/prk1--P-loop containing nucleotide triphosphate hydrolases-- 53041_57756_ 53041_57756_ E_6 3_1_2 6 A_60 B_294 E_160 --A_11 B_19 E_1238 -- endn 53041_99999 NOTPDB CPL Resolvase-like--Retrovirus zinc finger-like domains-- 47862_47862_ 47862_47862_ E_30 7_4_3 30 A_2 E_136 --A_2 E_136 -- 57059_endn_47862_99999 endc_47862_99999 NOTPDB RPT Saposin--Saposin-- 57196_50242_ 57196_50242_ E_16 3_2_1 16 A_2 B_7 E_2358 --A_2 B_2 E_148 -- 57196_99999 endc NOTPDB CPL EGF/Laminin--TIMP-like-- 55856_51395_ 55856_51395_ E_3 3_2_1 3 A_5 B_20 E_198 --A_111 B_849 E_252 -- endn_99999 endc INPDB CPL Cytochrome b5--FMN-linked oxidoreductases-- 50044_48065_ 50044_48065_ E_49 7_4_3 49 A_2 B_84 E_1671 --A_3 B_7 E_597 -- endn_47576_50044_99999 50729_endc_99999 NOTPDB CPL SH3-domain--DBL homology domain (DH-domain)-- 49742_49742_ 49742_49742_ E_53 9_5_4 53 B_5 E_66 --B_5 E_66 -- endn_49344_53244_74731_99999 50969_endc_49265_99999 INPDB RPT PHM/PNGase F--PHM/PNGase F-- 57196_57302_ 57196_57302_ E_2 4_2_2 2 A_2 B_7 E_2358 --A_3 B_7 E_578 -- 57302_99999 57302_99999 NOTPDB CPL EGF/Laminin--Snake toxin-like-- 55753_82754_ 55753_82754_ E_5 4_2_2 5 A_1 B_17 E_251 --A_1 E_89 -- 99999_55753 endc_99999 NOTPDB CPL Actin depolymerizing proteins--C-terminal, gelsolin-like domain of Sec23/24-- 50156_50044_ 50156_50044_ E_99 6_3_3 99 A_28 B_534 E_1380 --A_2 B_84 E_1671 -- endn_50156_99999 52540_endc_99999 NOTPDB CPL PDZ domain-like--SH3-domain-- 54197_57667_ 54197_57667_ E_6 4_2_2 6 A_38 B_208 E_173 --A_23 B_24 E_4849 -- 57667_49879 endc_54197 NOTPDB CPL HIT-like--C2H2 and C2HC zinc fingers-- 56300_47473_ 56300_47473_ E_28 4_2_2 28 A_170 B_837 E_750 --A_51 B_190 E_2808 -- endn_99999 endc_99999 NOTPDB CPL Metallo-dependent phosphatases--EF-hand-- 50729_81837_ 50729_81837_ E_55 6_3_3 55 A_14 B_44 E_3057 --B_1 E_90 -- 46626_endn_99999 50978_endc_99999 INPDB CPL PH domain-like--BEACH domain-- 48056_81296_ 48056_81296_ E_25 6_4_2 25 A_3 B_19 E_96 --A_40 B_404 E_1207 -- 48056_48050_99999_55486 endc_99999 INPDB CPL Di-copper centre-containing domain--E set domains-- 47220_56672_ 47220_56672_ E_16 6_2_4 16 A_6 B_4 E_147 --A_66 B_378 E_3164 -- 50630_endn 51569_56672_endc_53098 NOTPDB CPL alpha-catenin/vinculin--DNA/RNA polymerases-- 47769_57850_ 47769_57850_ E_5 3_2_1 5 A_6 B_20 E_633 --A_19 B_52 E_3605 -- endn_50978 endc NOTPDB CPL SAM/Pointed domain--RING finger domain, C3HC4-- 50242_57467_ 50242_57467_ E_3 3_1_2 3 A_2 B_2 E_148 --A_2 B_8 E_358 -- endn 57467_endc NOTPDB CPL TIMP-like--Ovomucoid/PCI-1 like inhibitors-- 50729_48065_ 50729_48065_ E_4 5_3_2 4 A_14 B_44 E_3057 --A_3 B_7 E_597 -- endn_54236_47031 50729_99999 NOTPDB CPL PH domain-like--DBL homology domain (DH-domain)-- 49879_57850_ 49879_57850_ E_4 4_2_2 4 A_4 B_172 E_486 --A_19 B_52 E_3605 -- endn_99999 endc_99999 NOTPDB CPL SMAD/FHA domain--RING finger domain, C3HC4-- 47655_74853_ 47655_74853_ E_23 4_2_2 23 A_3 B_5 E_84 --A_1 B_10 E_76 -- endn_99999 74853_endc NOTPDB CPL STAT--Lamin A/C globular tail domain-- 64268_56112_ 64268_56112_ E_16 3_1_2 16 B_5 E_392 --A_114 B_971 E_9319 -- endn endc_99999 NOTPDB CPL PX domain--Protein kinase-like (PK-like)-- 47769_56112_ 47769_56112_ E_14 4_1_3 14 A_6 B_20 E_633 --A_114 B_971 E_9319 -- endn 50044_endc_99999 NOTPDB CPL SAM/Pointed domain--Protein kinase-like (PK-like)-- 47954_52540_ 47954_52540_ E_4 4_2_2 4 A_52 B_42 E_726 --A_2129 B_14320 E_12913 -- 47954_99999 52540_endc NOTPDB CPL Cyclin-like--P-loop containing nucleotide triphosphate hydrolases-- 47895_52540_ 47895_52540_ E_212 4_3_1 212 A_1 B_5 E_218 --A_2129 B_14320 E_12913 -- endn_47895_99999 endc INPDB CPL Transducin (alpha subunit), insertion domain--P-loop containing nucleotide triphosphate hydrolases-- 56672_52058_ 56672_52058_ E_2 4_2_2 2 A_66 B_378 E_3164 --A_6 B_143 E_2568 -- endn_99999 endc_99999 NOTPDB CPL DNA/RNA polymerases--L domain-like-- 54695_48403_ 54695_48403_ E_16 5_3_2 16 B_6 E_2078 --A_4 B_168 E_2348 -- endn_46579_99999 endc_99999 NOTPDB CPL POZ domain--Ankyrin repeat-- 49562_57889_ 49562_57889_ E_25 4_2_2 25 B_12 E_1627 --A_7 B_6 E_663 -- endn_99999 57889_99999 NOTPDB CPL C2 domain (Calcium/lipid-binding domain, CaLB)--Cysteine-rich domain-- 57850_57302_ 57850_57302_ E_3 4_2_2 3 A_19 B_52 E_3605 --A_3 B_7 E_578 -- endn_99999 57850_99999 NOTPDB CPL RING finger domain, C3HC4--Snake toxin-like-- 56487_56487_ 56487_56487_ E_100 11_6_5 100 B_1 E_193 --B_1 E_193 -- 57440_endn_69848_56487_49854_99999 69848_56487_endc_49854_99999 NOTPDB RPT Scavenger receptor cysteine-rich (SRCR) domain--Scavenger receptor cysteine-rich (SRCR) domain-- 47616_52374_ 47616_52374_ E_13 6_3_3 13 A_7 B_434 E_765 --A_247 B_1540 E_642 -- endn_52833_99999 47323_endc_50715 NOTPDB CPL Glutathione S-transferase (GST), C-terminal domain--Nucleotidylyl transferase-- 49344_49742_ 49344_49742_ E_21 4_2_2 21 B_5 E_57 --B_5 E_66 -- endn_99999 endc_49742 NOTPDB CPL CBD9-like--PHM/PNGase F-- 56112_47473_ 56112_47473_ E_76 4_2_2 76 A_114 B_971 E_9319 --A_51 B_190 E_2808 -- endn_99999 endc_99999 NOTPDB CPL Protein kinase-like (PK-like)--EF-hand-- 57095_56112_ 57095_56112_ E_3 4_2_2 3 A_10 B_6 E_198 --A_114 B_971 E_9319 -- endn_99999 endc_56112 NOTPDB CPL Scorpion toxin-like--Protein kinase-like (PK-like)-- 50630_53098_ 50630_53098_ E_12 6_3_3 12 A_15 B_69 E_1046 --A_290 B_2494 E_2335 -- endn_57756_99999 56672_endc_99999 NOTPDB CPL Acid proteases--Ribonuclease H-like-- 51069_49265_ 51069_49265_ E_9 4_2_2 9 B_21 E_187 --A_23 B_135 E_1734 -- endn_99999 endc_99999 NOTPDB CPL Carbonic anhydrase--Fibronectin type III-- 47162_52540_ 47162_52540_ E_2 3_1_2 2 A_1 B_13 E_38 --A_2129 B_14320 E_12913 -- endn 52047_99999 NOTPDB CPL Apolipoprotein--P-loop containing nucleotide triphosphate hydrolases-- 56176_56176_ 56176_56176_ E_3 5_2_3 3 A_43 B_454 E_248 --A_43 B_454 E_248 -- endn_99999 56194_endc_99999 NOTPDB RPT FAD-binding domain--FAD-binding domain-- 53649_54060_ 53649_54060_ E_23 5_3_2 23 A_60 B_683 E_430 --A_4 B_140 E_121 -- endn_57283_99999 endc_99999 NOTPDB CPL Alkaline phosphatase-like--His-Me finger endonucleases-- 50044_53254_ 50044_53254_ E_12 3_2_1 12 A_2 B_84 E_1671 --A_18 B_402 E_440 -- 53254_99999 endc NOTPDB CPL SH3-domain--Phosphoglycerate mutase-like-- 46626_54447_ 46626_54447_ E_5 4_2_2 5 A_40 B_894 E_220 --B_2 E_36 -- endn_99999 endc_99999 NOTPDB CPL Cytochrome c--ssDNA-binding transcriptional regulator domain-- 54236_46934_ 54236_46934_ E_11 4_2_2 11 A_18 B_81 E_1815 --A_21 B_114 E_420 -- endn_99999 51366_99999 NOTPDB CPL Ubiquitin-like--UBA-like-- 49599_54001_ 49599_54001_ E_21 4_2_2 21 A_1 E_685 --A_60 B_262 E_1838 -- endn_99999 endc_99999 NOTPDB CPL TRAF domain-like--Cysteine proteinases-- 50494_82895_ 50494_82895_ E_6 4_2_2 6 A_19 B_482 E_1600 --E_618 -- 57196_99999 endc_82895 NOTPDB CPL Trypsin-like serine proteases--TSP-1 type 1 repeat-- 57610_47473_ 57610_47473_ E_11 5_4_1 11 A_1 B_1 E_118 --A_51 B_190 E_2808 -- endn_57610_57467_99999 endc NOTPDB CPL Thyroglobulin type-1 domain--EF-hand-- 52799_49265_ 52799_49265_ E_4 3_2_1 4 A_16 B_112 E_1201 --A_23 B_135 E_1734 -- 52799_99999 endc NOTPDB CPL (Phosphotyrosine protein) phosphatases II--Fibronectin type III-- 82919_53300_ 82919_53300_ E_43 6_3_3 43 A_2 B_5 E_56 --A_51 B_345 E_996 -- endn_81995_99999 endc_81995_99999 INPDB CPL Zn-finger domain of Sec23/24--vWA-like-- 57440_57625_ 57440_57625_ E_2 3_1_2 2 A_6 B_6 E_228 --B_2 E_246 -- endn 57625_99999 NOTPDB CPL Kringle-like--Tachycitin-- 50044_64268_ 50044_64268_ E_2 4_2_2 2 A_2 B_84 E_1671 --B_5 E_392 -- endn_55550 50044_99999 NOTPDB CPL SH3-domain--PX domain-- 57424_57196_ 57424_57196_ E_80 8_3_5 80 E_497 --A_2 B_7 E_2358 -- endn_57424_99999 57196_57424_63825_endc_99999 INPDB CPL LDL receptor-like module--EGF/Laminin-- 49723_48484_ 49723_48484_ E_20 4_2_2 20 A_1 B_8 E_179 --A_1 B_6 E_69 -- endn_99999 endc_99999 INPDB CPL Lipase/lipooxygenase domain (PLAT/LH2 domain)--Lipoxigenase-- 56112_53448_ 56112_53448_ E_2 3_1_2 2 A_114 B_971 E_9319 --A_346 B_1868 E_1125 -- endn endc_99999 NOTPDB CPL Protein kinase-like (PK-like)--Nucleotide-diphospho-sugar transferases-- 52075_56112_ 52075_56112_ E_5 4_3_1 5 B_3 E_104 --A_114 B_971 E_9319 -- 52047_52058_99999 endc NOTPDB CPL Outer arm dynein light chain 1--Protein kinase-like (PK-like)-- 53300_57535_ 53300_57535_ E_5 4_2_2 5 A_51 B_345 E_996 --B_3 E_582 -- endn_57535 endc_57535 NOTPDB CPL vWA-like--Complement control module/SCR domain-- 51445_57625_ 51445_57625_ E_10 4_2_2 10 A_89 B_1646 E_1474 --B_2 E_246 -- endn_51445 57625_endc NOTPDB CPL (Trans)glycosidases--Tachycitin-- 57756_53098_ 57756_53098_ E_11 5_2_3 11 A_11 B_19 E_1238 --A_290 B_2494 E_2335 -- endn_99999 56672_endc_99999 NOTPDB CPL Retrovirus zinc finger-like domains--Ribonuclease H-like-- 52540_47370_ 52540_47370_ E_12 4_2_2 12 A_2129 B_14320 E_12913 --A_3 B_4 E_452 -- 52540_endn endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Bromodomain-- 46966_46966_ 46966_46966_ E_269 13_7_6 269 A_7 B_30 E_584 --A_7 B_30 E_584 -- 52087_endn_46966_50729_47576_47473_99999 51045_46966_56487_47473_endc_99999 INPDB RPT Spectrin repeat--Spectrin repeat-- 47473_57467_ 47473_57467_ E_14 3_1_2 14 A_51 B_190 E_2808 --A_2 B_8 E_358 -- endn 57610_99999 NOTPDB CPL EF-hand--Ovomucoid/PCI-1 like inhibitors-- 69848_69848_ 69848_69848_ E_15 6_4_2 15 E_59 --E_59 -- endn_69848_49899_99999 69848_endc NOTPDB RPT LCCL domain--LCCL domain-- 69848_53300_ 69848_53300_ E_3 4_2_2 3 E_59 --A_51 B_345 E_996 -- endn_99999 endc_53300 NOTPDB CPL LCCL domain--vWA-like-- 55753_47050_ 55753_47050_ E_22 3_2_1 22 A_1 B_17 E_251 --B_2 E_83 -- 99999_55753 endc NOTPDB CPL Actin depolymerizing proteins--Thermostable subdomain from chicken villin headpiece-- 50249_48726_ 50249_48726_ E_3 3_2_1 3 A_390 B_2734 E_1438 --A_14 B_78 E_4071 -- endn_99999 endc NOTPDB CPL Nucleic acid-binding proteins--Immunoglobulin-- 57424_81321_ 57424_81321_ E_18 5_3_2 18 E_497 --A_7 B_20 E_8234 -- endn_57424_99999 endc_99999 NOTPDB CPL LDL receptor-like module--Family A G protein-coupled receptor-like-- 47473_50729_ 47473_50729_ E_8 4_2_2 8 A_51 B_190 E_2808 --A_14 B_44 E_3057 -- endn_51703 endc_99999 NOTPDB CPL EF-hand--PH domain-like-- 54160_52540_ 54160_52540_ E_62 6_3_3 62 A_7 B_11 E_374 --A_2129 B_14320 E_12913 -- 54160_endn_99999 52540_endc_99999 NOTPDB CPL Chromo domain-like--P-loop containing nucleotide triphosphate hydrolases-- 52540_75625_ 52540_75625_ E_2 4_2_2 2 A_2129 B_14320 E_12913 --B_121 E_26 -- endn_99999 endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--YebC-like-- 57850_52374_ 57850_52374_ E_2 3_2_1 2 A_19 B_52 E_3605 --A_247 B_1540 E_642 -- 53067_99999 endc NOTPDB CPL RING finger domain, C3HC4--Nucleotidylyl transferase-- 54919_54919_ 54919_54919_ E_14 6_3_3 14 A_22 B_92 E_118 --A_22 B_92 E_118 -- endn_52833_99999 endc_99999_54919 NOTPDB RPT Nucleoside diphosphate kinases--Nucleoside diphosphate kinases-- 51045_54928_ 51045_54928_ E_4 4_2_2 4 B_5 E_413 --A_6 B_60 E_3471 -- 54928_99999 endc_99999 NOTPDB CPL WW domain--RNA-binding domain, RBD-- 56968_48431_ 56968_48431_ E_35 5_2_3 35 A_1 B_2 E_55 --A_5 B_28 E_87 -- endn_99999 56968_endc_99999 INPDB CPL Lipovitellin-phosvitin complex; beta-sheet shell regions--Lipovitellin-phosvitin complex, superhelical domain-- 46689_55486_ 46689_55486_ E_8 3_1_2 8 A_246 B_4125 E_4002 --A_64 B_735 E_1617 -- endn endc_99999 NOTPDB CPL Homeodomain-like--Metalloproteases ("zincins"), catalytic domain-- 52096_57667_ 52096_57667_ E_2 3_1_2 2 A_96 B_1208 E_331 --A_23 B_24 E_4849 -- endn endc_99999 NOTPDB CPL ClpP/crotonase--C2H2 and C2HC zinc fingers-- 47031_50729_ 47031_50729_ E_281 10_4_6 281 B_13 E_440 --A_14 B_44 E_3057 -- endn_50729_54236_99999 50729_50156_48065_endc_57850_99999 INPDB CPL Second domain of FERM--PH domain-like-- 56112_54427_ 56112_54427_ E_20 3_2_1 20 A_114 B_971 E_9319 --A_11 B_446 E_248 -- endn_99999 endc NOTPDB CPL Protein kinase-like (PK-like)--NTF2-like-- 55781_48547_ 55781_48547_ E_38 5_3_2 38 A_54 B_1030 E_131 --A_2 B_17 E_233 -- endn_55781_99999 endc_99999 NOTPDB CPL GAF domain-like--Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b-- 56112_50965_ 56112_50965_ E_2 3_2_1 2 A_114 B_971 E_9319 --A_4 B_35 E_898 -- endn_99999 endc NOTPDB CPL Protein kinase-like (PK-like)--Galactose oxidase, central domain-- 47986_52200_ 47986_52200_ E_4 3_1_2 4 A_8 B_32 E_410 --A_2 B_41 E_302 -- endn endc_99999 NOTPDB CPL DEATH domain--Toll/Interleukin receptor TIR domain-- 56112_82615_ 56112_82615_ E_8 4_2_2 8 A_114 B_971 E_9319 --A_1 B_2 E_41 -- endn_99999 82615_99999 NOTPDB CPL Protein kinase-like (PK-like)--Polo domain-- 46785_56801_ 46785_56801_ E_2 3_1_2 2 A_1241 B_7979 E_2143 --A_139 B_882 E_563 -- endn endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Firefly luciferase-like-- 47353_51283_ 47353_51283_ E_4 4_2_2 4 A_3 B_6 E_153 --A_25 B_160 E_82 -- endn_47943 50630_endc NOTPDB CPL Retrovirus capsid protein C-terminal domain--Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase)-- 57016_51445_ 57016_51445_ E_3 5_3_2 3 B_1 E_48 --A_89 B_1646 E_1474 -- endn_54106_99999 54556_99999 NOTPDB CPL Plant lectins/antimicrobial peptides--(Trans)glycosidases-- 48050_48056_ 48050_48056_ E_22 4_2_2 22 B_3 E_31 --A_3 B_19 E_96 -- endn_99999 81296_99999 INPDB CPL Hemocyanin, N-terminal domain--Di-copper centre-containing domain-- 49854_56436_ 49854_56436_ E_3 5_3_2 3 B_1 E_636 --A_2 B_62 E_1409 -- 56436_endn_99999 56436_99999 NOTPDB CPL Spermadhesin, CUB domain--C-type lectin-like-- 55486_49599_ 55486_49599_ E_13 4_1_3 13 A_64 B_735 E_1617 --A_1 E_685 -- endn 57196_endc_99999 NOTPDB CPL Metalloproteases ("zincins"), catalytic domain--TRAF domain-like-- 57701_48508_ 57701_48508_ E_4 4_2_2 4 A_9 B_13 E_379 --A_1 B_10 E_1172 -- endn_99999 endc_99999 NOTPDB CPL Zn2/Cys6 DNA-binding domain--Nuclear receptor ligand-binding domain-- 63748_63748_ 63748_63748_ E_27 7_2_5 27 A_4 B_5 E_441 --A_4 B_5 E_441 -- endn_99999 46774_endc_63748_99999_46689 NOTPDB RPT Tudor/PWWP--Tudor/PWWP-- 48508_48508_ 48508_48508_ E_6 5_3_2 6 A_1 B_10 E_1172 --A_1 B_10 E_1172 -- endn_57716_99999 57716_endc NOTPDB RPT Nuclear receptor ligand-binding domain--Nuclear receptor ligand-binding domain-- 50969_55846_ 50969_55846_ E_2 3_1_2 2 A_24 B_218 E_336 --B_142 E_52 -- endn endc_99999 NOTPDB CPL YVTN repeat-like/Quinoprotein amine dehydrogenase--N-acetylmuramoyl-L-alanine amidase-like-- 55486_53300_ 55486_53300_ E_4 4_1_3 4 A_64 B_735 E_1617 --A_51 B_345 E_996 -- endn 51735_endc_99999 NOTPDB CPL Metalloproteases ("zincins"), catalytic domain--vWA-like-- 57184_49899_ 57184_49899_ E_9 7_4_3 9 B_4 E_859 --A_22 B_208 E_1314 -- 57196_endn_57630_99999 49899_endc_99999 NOTPDB CPL Growth factor receptor domain--Concanavalin A-like lectins/glucanases-- 55486_49854_ 55486_49854_ E_32 8_4_4 32 A_64 B_735 E_1617 --B_1 E_636 -- endn_49854_49410_99999 endc_49854_82895_99999 NOTPDB CPL Metalloproteases ("zincins"), catalytic domain--Spermadhesin, CUB domain-- 46919_53098_ 46919_53098_ E_4 5_3_2 4 E_4 --A_290 B_2494 E_2335 -- endn_56672_53098 81296_endc INPDB CPL N-terminal Zn binding domain of HIV integrase--Ribonuclease H-like-- 47370_47370_ 47370_47370_ E_45 7_3_4 45 A_3 B_4 E_452 --A_3 B_4 E_452 -- endn_47370_99999 48695_endc_47370_99999 INPDB RPT Bromodomain--Bromodomain-- 48403_54236_ 48403_54236_ E_3 3_1_2 3 A_4 B_168 E_2348 --A_18 B_81 E_1815 -- endn endc_99999 NOTPDB CPL Ankyrin repeat--Ubiquitin-like-- 53633_53720_ 53633_53720_ E_14 3_2_1 14 A_84 B_449 E_69 --A_55 B_835 E_336 -- endn_99999 endc NOTPDB CPL Carbamate kinase-like--ALDH-like-- 54534_47473_ 54534_47473_ E_16 6_3_3 16 A_32 B_599 E_266 --A_51 B_190 E_2808 -- endn_54534_99999 54534_endc_99999 NOTPDB CPL FKBP-like--EF-hand-- 81383_50960_ 81383_50960_ E_3 3_1_2 3 B_8 E_2068 --A_34 B_192 E_75 -- endn endc_99999 NOTPDB CPL F-box domain--TolB, C-terminal domain-- 56436_57196_ 56436_57196_ E_26 9_4_5 26 A_2 B_62 E_1409 --A_2 B_7 E_2358 -- 57196_56436_endn_99999 57196_56436_endc_57535_99999 INPDB CPL C-type lectin-like--EGF/Laminin-- 57196_57501_ 57196_57501_ E_4 3_2_1 4 A_2 B_7 E_2358 --A_1 B_17 E_479 -- 57196_endn endc NOTPDB CPL EGF/Laminin--Cystine-knot cytokines-- 57850_54236_ 57850_54236_ E_9 4_2_2 9 A_19 B_52 E_3605 --A_18 B_81 E_1815 -- endn_99999 endc_99999 NOTPDB CPL RING finger domain, C3HC4--Ubiquitin-like-- 52047_81606_ 52047_81606_ E_2 4_2_2 2 A_9 B_93 E_2576 --A_2 B_180 E_410 -- 52047_endn 55073_99999 NOTPDB CPL RNI-like--Protein serine/threonine phosphatase 2C, catalytic domain-- 49879_54197_ 49879_54197_ E_6 3_1_2 6 A_4 B_172 E_486 --A_38 B_208 E_173 -- endn 57667_endc NOTPDB CPL SMAD/FHA domain--HIT-like-- 52968_52968_ 52968_52968_ E_9 4_2_2 9 B_16 E_26 --B_16 E_26 -- endn_99999 endc_99999 NOTPDB RPT B12-dependend dehydatases associated subunit--B12-dependend dehydatases associated subunit-- 48452_82199_ 48452_82199_ E_16 5_2_3 16 A_146 B_1937 E_3442 --A_2 B_29 E_692 -- endn_99999 48452_endc_99999 NOTPDB CPL TPR-like--SET domain-- 49899_57184_ 49899_57184_ E_3 4_2_2 3 A_22 B_208 E_1314 --B_4 E_859 -- endn_99999 57196_99999 NOTPDB CPL Concanavalin A-like lectins/glucanases--Growth factor receptor domain-- 82199_57903_ 82199_57903_ E_22 6_3_3 22 A_2 B_29 E_692 --A_56 B_38 E_1435 -- endn_63748_99999 57903_endc_99999 NOTPDB CPL SET domain--FYVE/PHD zinc finger-- 52047_51161_ 52047_51161_ E_2 4_2_2 2 A_9 B_93 E_2576 --A_81 B_714 E_168 -- endn_99999 endc_99999 NOTPDB CPL RNI-like--Trimeric LpxA-like enzymes-- 48452_49764_ 48452_49764_ E_8 3_1_2 8 A_146 B_1937 E_3442 --A_44 B_138 E_388 -- endn endc_99999 NOTPDB CPL TPR-like--HSP20-like chaperones-- 49899_55486_ 49899_55486_ E_9 5_3_2 9 A_22 B_208 E_1314 --A_64 B_735 E_1617 -- endn_49265_99999 55486_99999 NOTPDB CPL Concanavalin A-like lectins/glucanases--Metalloproteases ("zincins"), catalytic domain-- 53300_57302_ 53300_57302_ E_2 3_1_2 2 A_51 B_345 E_996 --A_3 B_7 E_578 -- endn 47473_57535 NOTPDB CPL vWA-like--Snake toxin-like-- 57825_57667_ 57825_57667_ E_11 5_2_3 11 A_16 B_21 E_30 --A_23 B_24 E_4849 -- 57667_99999 57667_endc_99999 NOTPDB CPL Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain--C2H2 and C2HC zinc fingers-- 54534_53448_ 54534_53448_ E_2 3_1_2 2 A_32 B_599 E_266 --A_346 B_1868 E_1125 -- endn endc_50370 NOTPDB CPL FKBP-like--Nucleotide-diphospho-sugar transferases-- 52047_54236_ 52047_54236_ E_6 3_2_1 6 A_9 B_93 E_2576 --A_18 B_81 E_1815 -- endn_74924 endc NOTPDB CPL RNI-like--Ubiquitin-like-- 57903_57889_ 57903_57889_ E_34 8_4_4 34 A_56 B_38 E_1435 --A_7 B_6 E_663 -- endn_57903_57889_99999 57903_57889_55729_99999 NOTPDB CPL FYVE/PHD zinc finger--Cysteine-rich domain-- 52799_56091_ 52799_56091_ E_19 4_2_2 19 A_16 B_112 E_1201 --A_34 B_180 E_92 -- endn_99999 50249_endc NOTPDB CPL (Phosphotyrosine protein) phosphatases II--DNA ligase/mRNA capping enzyme, catalytic domain-- 48403_52047_ 48403_52047_ E_2 4_2_2 2 A_4 B_168 E_2348 --A_9 B_93 E_2576 -- endn_99999 endc_99999 NOTPDB CPL Ankyrin repeat--RNI-like-- 51045_54534_ 51045_54534_ E_16 4_2_2 16 B_5 E_413 --A_32 B_599 E_266 -- endn_99999 endc_99999 INPDB CPL WW domain--FKBP-like-- 54511_57184_ 54511_57184_ E_12 7_4_3 12 B_3 E_22 --B_4 E_859 -- 57196_57184_82895_99999 57196_57610_99999 NOTPDB CPL GFP-like--Growth factor receptor domain-- 49723_49723_ 49723_49723_ E_29 7_3_4 29 A_1 B_8 E_179 --A_1 B_8 E_179 -- endn_49723_99999 69848_49723_endc_99999 NOTPDB RPT Lipase/lipooxygenase domain (PLAT/LH2 domain)--Lipase/lipooxygenase domain (PLAT/LH2 domain)-- 57424_50494_ 57424_50494_ E_21 4_3_1 21 E_497 --A_19 B_482 E_1600 -- 57424_endn_56487 endc NOTPDB CPL LDL receptor-like module--Trypsin-like serine proteases-- 57610_50969_ 57610_50969_ E_10 4_2_2 10 A_1 B_1 E_118 --A_24 B_218 E_336 -- 57610_57184 57196_endc NOTPDB CPL Thyroglobulin type-1 domain--YVTN repeat-like/Quinoprotein amine dehydrogenase-- 57196_57184_ 57196_57184_ E_205 22_11_11 205 A_2 B_7 E_2358 --B_4 E_859 -- 47686_endn_63825_49899_57095_57184_82895_57196_48726_57581_99999 50969_49899_63825_57184_endc_57283_63829_57196_57581_99999_56112 NOTPDB CPL EGF/Laminin--Growth factor receptor domain-- 57850_48695_ 57850_48695_ E_4 4_2_2 4 A_19 B_52 E_3605 --A_18 B_378 E_163 -- endn_99999 57845_99999 NOTPDB CPL RING finger domain, C3HC4--Multiheme cytochromes-- 57903_57716_ 57903_57716_ E_11 8_4_4 11 A_56 B_38 E_1435 --A_72 B_426 E_2067 -- endn_57716_57903_99999 57586_57716_57903_99999 NOTPDB CPL FYVE/PHD zinc finger--Glucocorticoid receptor-like (DNA-binding domain)-- 55658_55658_ 55658_55658_ E_5 3_1_2 5 B_108 E_48 --B_108 E_48 -- endn 53098_99999 NOTPDB RPT L9 N-domain-like--L9 N-domain-like-- 54403_54403_ 54403_54403_ E_23 7_3_4 23 A_5 B_15 E_194 --A_5 B_15 E_194 -- 54403_endn_99999 54403_54001_endc_99999 NOTPDB RPT Cystatin/monellin--Cystatin/monellin-- 82895_48056_ 82895_48056_ E_2 4_2_2 2 E_618 --A_3 B_19 E_96 -- endn_99999 endc_99999 NOTPDB CPL TSP-1 type 1 repeat--Di-copper centre-containing domain-- 47060_55681_ 47060_55681_ E_35 6_3_3 35 A_18 B_103 E_93 --A_205 B_1250 E_450 -- endn_47060_99999 52954_endc_99999 NOTPDB CPL S15/NS1 RNA-binding domain--Class II aaRS and biotin synthetases-- 48452_47240_ 48452_47240_ E_5 6_3_3 5 A_146 B_1937 E_3442 --A_126 B_660 E_337 -- endn_48452_99999 52540_endc_99999 NOTPDB CPL TPR-like--Ferritin-like-- 50729_52047_ 50729_52047_ E_3 5_2_3 3 A_14 B_44 E_3057 --A_9 B_93 E_2576 -- 51658_endn 52058_endc_99999 NOTPDB CPL PH domain-like--RNI-like-- 48439_51197_ 48439_51197_ E_4 3_2_1 4 A_48 B_249 E_670 --A_15 B_244 E_617 -- endn_99999 endc NOTPDB CPL Protein prenylyltransferase--Clavaminate synthase-like-- 81383_50965_ 81383_50965_ E_57 6_3_3 57 B_8 E_2068 --A_4 B_35 E_898 -- endn_52343_99999 endc_50998_99999 NOTPDB CPL F-box domain--Galactose oxidase, central domain-- 57196_57440_ 57196_57440_ E_5 4_2_2 5 A_2 B_7 E_2358 --A_6 B_6 E_228 -- 57196_endn 50494_99999 NOTPDB CPL EGF/Laminin--Kringle-like-- 49562_56112_ 49562_56112_ E_9 5_3_2 9 B_12 E_1627 --A_114 B_971 E_9319 -- endn_57889_99999 endc_99999 NOTPDB CPL C2 domain (Calcium/lipid-binding domain, CaLB)--Protein kinase-like (PK-like)-- 47769_46785_ 47769_46785_ E_13 4_2_2 13 A_6 B_20 E_633 --A_1241 B_7979 E_2143 -- endn_99999 endc_99999 NOTPDB CPL SAM/Pointed domain--"Winged helix" DNA-binding domain-- 50978_50978_ 50978_50978_ E_11 5_2_3 11 A_7 B_101 E_3576 --A_7 B_101 E_3576 -- endn_99999 48452_endc_99999 NOTPDB RPT WD40-repeat--WD40-repeat-- 49879_46785_ 49879_46785_ E_3 4_2_2 3 A_4 B_172 E_486 --A_1241 B_7979 E_2143 -- endn_99999 endc_99999 NOTPDB CPL SMAD/FHA domain--"Winged helix" DNA-binding domain-- 81631_55003_ 81631_55003_ E_33 4_2_2 33 B_2 E_37 --A_5 B_1 E_78 -- endn_81301 endc_99999 INPDB CPL Poly(A) polymerase, middle domain--Poly(A) polymerase, C-terminal domain-- 48726_57667_ 48726_57667_ E_47 7_4_3 47 A_14 B_78 E_4071 --A_23 B_24 E_4849 -- endn_57667_54171_99999 57667_endc_99999 NOTPDB CPL Immunoglobulin--C2H2 and C2HC zinc fingers-- 57424_50911_ 57424_50911_ E_2 4_2_2 2 E_497 --E_86 -- 57424_99999 endc_99999 NOTPDB CPL LDL receptor-like module--Mannose 6-phosphate receptor domain-- 49758_47473_ 49758_47473_ E_46 5_3_2 46 B_4 E_128 --A_51 B_190 E_2808 -- endn_54001_99999 endc_99999 INPDB CPL Calpain large subunit, middle domain (domain III)--EF-hand-- 47095_47095_ 47095_47095_ E_201 9_6_3 201 A_2 B_16 E_689 --A_2 B_16 E_689 -- 50203_endn_55418_63763_99999_46689 endc_47095_99999 NOTPDB RPT HMG-box--HMG-box-- 69179_69179_ 69179_69179_ E_106 7_4_3 106 A_2 B_11 E_172 --A_2 B_11 E_172 -- endn_69179_69318_99999 69179_endc_99999 INPDB RPT Integrin domains--Integrin domains-- 52540_75569_ 52540_75569_ E_13 4_2_2 13 A_2129 B_14320 E_12913 --A_6 B_1 E_32 -- endn_56112 endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Hypothetical protein MTH1020-- 57581_57184_ 57581_57184_ E_19 6_3_3 19 B_2 E_61 --B_4 E_859 -- 57196_endn_99999 57196_57581_99999 NOTPDB CPL TB module/8-cys domain--Growth factor receptor domain-- 56968_56968_ 56968_56968_ E_3 4_2_2 3 A_1 B_2 E_55 --A_1 B_2 E_55 -- endn_48431 endc_99999 NOTPDB RPT Lipovitellin-phosvitin complex; beta-sheet shell regions--Lipovitellin-phosvitin complex; beta-sheet shell regions-- 54826_46689_ 54826_46689_ E_3 3_1_2 3 A_47 B_318 E_109 --A_246 B_4125 E_4002 -- endn endc_99999 NOTPDB CPL Enolase N-terminal domain-like--Homeodomain-like-- 63829_50978_ 63829_50978_ E_2 4_2_2 2 A_5 B_40 E_110 --A_7 B_101 E_3576 -- endn_47473 endc_99999 NOTPDB CPL Diisopropylfluorophosphatase (phosphotriesterase, DFP)--WD40-repeat-- 54928_52075_ 54928_52075_ E_5 4_2_2 5 A_6 B_60 E_3471 --B_3 E_104 -- endn_99999 54427_endc NOTPDB CPL RNA-binding domain, RBD--Outer arm dynein light chain 1-- 48452_51197_ 48452_51197_ E_7 3_2_1 7 A_146 B_1937 E_3442 --A_15 B_244 E_617 -- endn_99999 endc NOTPDB CPL TPR-like--Clavaminate synthase-like-- 50249_56436_ 50249_56436_ E_3 3_2_1 3 A_390 B_2734 E_1438 --A_2 B_62 E_1409 -- 52218_99999 endc NOTPDB CPL Nucleic acid-binding proteins--C-type lectin-like-- 51695_51445_ 51695_51445_ E_2 3_2_1 2 A_5 B_143 E_312 --A_89 B_1646 E_1474 -- endn_99999 endc NOTPDB CPL Phosphatidylinositol-specific phospholipase C (PI-PLC)--(Trans)glycosidases-- 57630_57196_ 57630_57196_ E_26 5_2_3 26 E_52 --A_2 B_7 E_2358 -- endn_99999 57196_50494_endc INPDB CPL GLA-domain--EGF/Laminin-- 47473_51905_ 47473_51905_ E_3 5_2_3 3 A_51 B_190 E_2808 --A_358 B_2910 E_1243 -- endn_99999 53706_54373_99999 NOTPDB CPL EF-hand--FAD/NAD(P)-binding domain-- 50985_56112_ 50985_56112_ E_4 4_2_2 4 B_15 E_285 --A_114 B_971 E_9319 -- endn_99999 endc_99999 NOTPDB CPL RCC1/BLIP-II--Protein kinase-like (PK-like)-- 81995_82919_ 81995_82919_ E_43 6_3_3 43 A_1 B_2 E_111 --A_2 B_5 E_56 -- 52540_endn_99999 endc_53300_99999 INPDB CPL beta-sandwich domain of Sec23/24--Zn-finger domain of Sec23/24-- 57716_57903_ 57716_57903_ E_8 6_3_3 8 A_72 B_426 E_2067 --A_56 B_38 E_1435 -- endn_57903_54862 57716_endc_99999 NOTPDB CPL Glucocorticoid receptor-like (DNA-binding domain)--FYVE/PHD zinc finger-- 57889_57903_ 57889_57903_ E_22 9_4_5 22 A_7 B_6 E_663 --A_56 B_38 E_1435 -- endn_57903_57889_99999 47769_57903_endc_57889_99999 NOTPDB CPL Cysteine-rich domain--FYVE/PHD zinc finger-- 51101_50965_ 51101_50965_ E_4 3_2_1 4 B_5 E_106 --A_4 B_35 E_898 -- 51101_endn endc NOTPDB CPL Mannose-binding lectins--Galactose oxidase, central domain-- 49417_55550_ 49417_55550_ E_37 6_3_3 37 A_10 B_39 E_458 --A_4 B_15 E_910 -- endn_47655_99999 49417_endc_99999 INPDB CPL p53-like transcription factors--SH2 domain-- 53098_54160_ 53098_54160_ E_16 4_2_2 16 A_290 B_2494 E_2335 --A_7 B_11 E_374 -- endn_99999 endc_99999 NOTPDB CPL Ribonuclease H-like--Chromo domain-like-- 49854_57196_ 49854_57196_ E_81 12_5_7 81 B_1 E_636 --A_2 B_7 E_2358 -- 57196_endn_57716_49854_99999 57196_endc_50965_49854_57535_49265_99999 NOTPDB CPL Spermadhesin, CUB domain--EGF/Laminin-- 47661_47473_ 47661_47473_ E_4 4_2_2 4 A_6 B_43 E_303 --A_51 B_190 E_2808 -- 47769_99999 47473_endc NOTPDB CPL t-snare proteins--EF-hand-- 52799_49562_ 52799_49562_ E_67 6_4_2 67 A_16 B_112 E_1201 --B_12 E_1627 -- endn_57889_56112_99999 endc_99999 INPDB CPL (Phosphotyrosine protein) phosphatases II--C2 domain (Calcium/lipid-binding domain, CaLB)-- 48350_50729_ 48350_50729_ E_23 6_4_2 23 B_8 E_786 --A_14 B_44 E_3057 -- endn_49562_48350_99999 endc_99999 NOTPDB CPL GTPase activation domain, GAP--PH domain-like-- 47616_52833_ 47616_52833_ E_5 5_3_2 5 A_7 B_434 E_765 --A_220 B_2517 E_2068 -- endn_52833_99999 47616_endc NOTPDB CPL Glutathione S-transferase (GST), C-terminal domain--Thioredoxin-like-- 54236_47031_ 54236_47031_ E_255 8_4_4 255 A_18 B_81 E_1815 --B_13 E_440 -- endn_54236_50156_99999 50729_50156_endc_99999 INPDB CPL Ubiquitin-like--Second domain of FERM-- 81383_50969_ 81383_50969_ E_8 5_2_3 8 B_8 E_2068 --A_24 B_218 E_336 -- endn_99999 50405_endc_99999 NOTPDB CPL F-box domain--YVTN repeat-like/Quinoprotein amine dehydrogenase-- 47769_50729_ 47769_50729_ E_3 4_2_2 3 A_6 B_20 E_633 --A_14 B_44 E_3057 -- 47769_99999 endc_99999 NOTPDB CPL SAM/Pointed domain--PH domain-like-- 57535_53300_ 57535_53300_ E_41 9_4_5 41 B_3 E_582 --A_51 B_345 E_996 -- 57302_endn_82895_57535 50494_53300_endc_99999_57535 NOTPDB CPL Complement control module/SCR domain--vWA-like-- 52540_54695_ 52540_54695_ E_7 5_2_3 7 A_2129 B_14320 E_12913 --B_6 E_2078 -- endn_99999 54695_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--POZ domain-- 81383_51197_ 81383_51197_ E_4 4_2_2 4 B_8 E_2068 --A_15 B_244 E_617 -- endn_99999 endc_99999 NOTPDB CPL F-box domain--Clavaminate synthase-like-- 57535_49854_ 57535_49854_ E_40 7_3_4 40 B_3 E_582 --B_1 E_636 -- endn_49854_99999 endc_49854_99999_57535 NOTPDB CPL Complement control module/SCR domain--Spermadhesin, CUB domain-- 54695_49599_ 54695_49599_ E_8 6_3_3 8 B_6 E_2078 --A_1 E_685 -- endn_49599_99999 54695_endc_99999 NOTPDB CPL POZ domain--TRAF domain-like-- 50729_48366_ 50729_48366_ E_13 5_3_2 13 A_14 B_44 E_3057 --E_271 -- endn_48065_99999 endc_99999 NOTPDB CPL PH domain-like--Ras GEF-- 51735_53098_ 51735_53098_ E_2 3_2_1 2 A_993 B_8798 E_3827 --A_290 B_2494 E_2335 -- endn_51735 endc NOTPDB CPL NAD(P)-binding Rossmann-fold domains--Ribonuclease H-like-- 57362_82895_ 57362_82895_ E_9 5_3_2 9 A_1 B_1 E_226 --E_618 -- endn_82895_99999 endc_82895 NOTPDB CPL BPTI-like--TSP-1 type 1 repeat-- 51045_50156_ 51045_50156_ E_18 6_3_3 18 B_5 E_413 --A_28 B_534 E_1380 -- 51045_endn_99999 54236_50156_99999 NOTPDB CPL WW domain--PDZ domain-like-- 57850_54928_ 57850_54928_ E_15 3_1_2 15 A_19 B_52 E_3605 --A_6 B_60 E_3471 -- endn endc_99999 NOTPDB CPL RING finger domain, C3HC4--RNA-binding domain, RBD-- 50370_57440_ 50370_57440_ E_20 4_2_2 20 B_67 E_219 --A_6 B_6 E_228 -- endn_99999 56436_endc NOTPDB CPL Ricin B-like lectins--Kringle-like-- 53850_48452_ 53850_48452_ E_6 3_1_2 6 A_257 B_5627 E_740 --A_146 B_1937 E_3442 -- endn endc_99999 NOTPDB CPL Periplasmic binding protein-like II--TPR-like-- 54171_82199_ 54171_82199_ E_12 4_2_2 12 A_2 B_19 E_401 --A_2 B_29 E_692 -- endn_99999 endc_99999 NOTPDB CPL DNA-binding domain--SET domain-- 57903_47954_ 57903_47954_ E_2 3_1_2 2 A_56 B_38 E_1435 --A_52 B_42 E_726 -- endn 47954_endc NOTPDB CPL FYVE/PHD zinc finger--Cyclin-like-- 57625_57424_ 57625_57424_ E_13 5_3_2 13 B_2 E_246 --E_497 -- 57625_endn_99999 57424_99999 NOTPDB CPL Tachycitin--LDL receptor-like module-- 46689_47095_ 46689_47095_ E_7 3_1_2 7 A_246 B_4125 E_4002 --A_2 B_16 E_689 -- endn 99999_47095 NOTPDB CPL Homeodomain-like--HMG-box-- 47162_47162_ 47162_47162_ E_9 5_2_3 9 A_1 B_13 E_38 --A_1 B_13 E_38 -- 47162_endn 47162_endc_99999 NOTPDB RPT Apolipoprotein--Apolipoprotein-- 48350_55961_ 48350_55961_ E_19 3_2_1 19 B_8 E_786 --A_9 B_245 E_370 -- endn_99999 endc NOTPDB CPL GTPase activation domain, GAP--Bet v1-like-- 50911_50911_ 50911_50911_ E_12 4_2_2 12 E_86 --E_86 -- 50911_99999 50911_99999 NOTPDB RPT Mannose 6-phosphate receptor domain--Mannose 6-phosphate receptor domain-- 48029_48547_ 48029_48547_ E_8 3_1_2 8 A_4 B_170 E_39 --A_2 B_17 E_233 -- endn endc_99999 NOTPDB CPL FliG--Catalytic domain of cyclic nucleotide phosphodiesterase 4b2b-- 82895_57567_ 82895_57567_ E_15 11_6_5 15 E_618 --E_254 -- 57424_endn_57283_57567_82895_99999 endc_57283_57567_82895_99999 NOTPDB CPL TSP-1 type 1 repeat--Serine proterase inhibitors-- 50331_53098_ 50331_53098_ E_2 3_2_1 2 A_61 B_521 E_45 --A_290 B_2494 E_2335 -- 99999_46689 endc NOTPDB CPL MOP-like--Ribonuclease H-like-- 56496_49899_ 56496_49899_ E_22 7_3_4 22 A_2 B_3 E_372 --A_22 B_208 E_1314 -- 57196_endn_49899 57196_49899_endc_99999 NOTPDB CPL Fibrinogen C-terminal domain-like--Concanavalin A-like lectins/glucanases-- 51905_56235_ 51905_56235_ E_7 4_2_2 7 A_358 B_2910 E_1243 --A_157 B_611 E_596 -- endn_51905 51735_99999 NOTPDB CPL FAD/NAD(P)-binding domain--N-terminal nucleophile aminohydrolases (Ntn hydrolases)-- 55550_57850_ 55550_57850_ E_20 4_2_2 20 A_4 B_15 E_910 --A_19 B_52 E_3605 -- endn_47473 endc_99999 INPDB CPL SH2 domain--RING finger domain, C3HC4-- 52777_53187_ 52777_53187_ E_2 3_1_2 2 A_10 B_418 E_328 --A_105 B_1042 E_648 -- endn endc_99999 NOTPDB CPL CoA-dependent acyltransferases--Zn-dependent exopeptidases-- 81324_81324_ 81324_81324_ E_207 12_7_5 207 A_34 B_130 E_1059 --A_34 B_130 E_1059 -- 63411_75445_endn_63600_55008_46689_99999 51206_endc_47473_49265_99999 NOTPDB RPT Voltage-gated potassium channels--Voltage-gated potassium channels-- 57196_82895_ 57196_82895_ E_16 6_2_4 16 A_2 B_7 E_2358 --E_618 -- 99999_82895 57196_endc_99999_57535 NOTPDB CPL EGF/Laminin--TSP-1 type 1 repeat-- 57567_57196_ 57567_57196_ E_9 6_3_3 9 E_254 --A_2 B_7 E_2358 -- 57196_57424_99999 57196_63825_99999 NOTPDB CPL Serine proterase inhibitors--EGF/Laminin-- 52540_47576_ 52540_47576_ E_13 6_4_2 13 A_2129 B_14320 E_12913 --B_8 E_704 -- 52540_endn_47576_99999 52540_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Calponin-homology domain, CH-domain-- 48726_63501_ 48726_63501_ E_15 5_3_2 15 A_14 B_78 E_4071 --A_1 E_180 -- endn_48726_99999 57440_99999 NOTPDB CPL Immunoglobulin--Frizzled cystein-rich domain-- 55550_56112_ 55550_56112_ E_294 7_4_3 294 A_4 B_15 E_910 --A_114 B_971 E_9319 -- endn_50044_55550_99999 endc_99999_56112 INPDB CPL SH2 domain--Protein kinase-like (PK-like)-- 47769_47769_ 47769_47769_ E_91 9_4_5 91 A_6 B_20 E_633 --A_6 B_20 E_633 -- endn_47769_48371_99999 47769_50729_endc_52200_99999 NOTPDB RPT SAM/Pointed domain--SAM/Pointed domain-- 46774_52540_ 46774_52540_ E_19 6_3_3 19 B_3 E_174 --A_2129 B_14320 E_12913 -- endn_47473_99999 endc_47473_99999 NOTPDB CPL ARID-like--P-loop containing nucleotide triphosphate hydrolases-- 49417_81296_ 49417_81296_ E_74 6_2_4 74 A_10 B_39 E_458 --A_40 B_404 E_1207 -- endn_99999 81296_48403_endc_99999 INPDB CPL p53-like transcription factors--E set domains-- 52799_52799_ 52799_52799_ E_126 5_2_3 126 A_16 B_112 E_1201 --A_16 B_112 E_1201 -- endn_99999 endc_49265_99999 INPDB RPT (Phosphotyrosine protein) phosphatases II--(Phosphotyrosine protein) phosphatases II-- 56112_64268_ 56112_64268_ E_4 4_2_2 4 A_114 B_971 E_9319 --B_5 E_392 -- 48371_99999 49562_99999 NOTPDB CPL Protein kinase-like (PK-like)--PX domain-- 49562_53300_ 49562_53300_ E_52 5_3_2 52 B_12 E_1627 --A_51 B_345 E_996 -- endn_49562_99999 endc_99999 NOTPDB CPL C2 domain (Calcium/lipid-binding domain, CaLB)--vWA-like-- 54862_57716_ 54862_57716_ E_9 3_1_2 9 A_411 B_743 E_103 --A_72 B_426 E_2067 -- endn 57716_57903 NOTPDB CPL 4Fe-4S ferredoxins--Glucocorticoid receptor-like (DNA-binding domain)-- 50129_57903_ 50129_57903_ E_2 3_1_2 2 A_67 B_883 E_442 --A_56 B_38 E_1435 -- endn 52047_99999 NOTPDB CPL GroES-like--FYVE/PHD zinc finger-- 64268_49562_ 64268_49562_ E_4 3_2_1 4 B_5 E_392 --B_12 E_1627 -- endn_56112 endc NOTPDB CPL PX domain--C2 domain (Calcium/lipid-binding domain, CaLB)-- 50923_50923_ 50923_50923_ E_5 3_2_1 5 A_1 B_15 E_170 --A_1 B_15 E_170 -- endn_99999 endc INPDB RPT Hemopexin-like domain--Hemopexin-like domain-- 81321_55486_ 81321_55486_ E_2 3_1_2 2 A_7 B_20 E_8234 --A_64 B_735 E_1617 -- endn endc_99999 NOTPDB CPL Family A G protein-coupled receptor-like--Metalloproteases ("zincins"), catalytic domain-- 49854_49785_ 49854_49785_ E_24 4_2_2 24 B_1 E_636 --A_10 B_366 E_724 -- endn_49854 49785_endc NOTPDB CPL Spermadhesin, CUB domain--Galactose-binding domain-like-- 57196_75011_ 57196_75011_ E_4 4_2_2 4 A_2 B_7 E_2358 --B_15 E_17 -- 63825_99999 57196_99999 NOTPDB CPL EGF/Laminin--3-carboxy-cis,cis-mucoante lactonizing enzyme-- 55486_50923_ 55486_50923_ E_102 6_4_2 102 A_64 B_735 E_1617 --A_1 B_15 E_170 -- 57440_endn_47090_99999 endc_99999 INPDB CPL Metalloproteases ("zincins"), catalytic domain--Hemopexin-like domain-- 57603_51011_ 57603_51011_ E_10 4_2_2 10 B_1 E_56 --A_17 B_377 E_212 -- endn_99999 endc_82895 NOTPDB CPL Fibronectin type I module--alpha-Amylases, C-terminal beta-sheet domain-- 47040_47040_ 47040_47040_ E_4 4_3_1 4 A_1 B_1 E_50 --A_1 B_1 E_50 -- 57933_endn_99999 endc NOTPDB RPT Kix domain of CBP (creb binding protein)--Kix domain of CBP (creb binding protein)-- 53448_50370_ 53448_50370_ E_74 9_7_2 74 A_346 B_1868 E_1125 --B_67 E_219 -- 52540_endn_54534_53167_46955_50370_99999 endc_99999 NOTPDB CPL Nucleotide-diphospho-sugar transferases--Ricin B-like lectins-- 52058_49265_ 52058_49265_ E_11 4_2_2 11 A_6 B_143 E_2568 --A_23 B_135 E_1734 -- endn_57184 49265_99999 NOTPDB CPL L domain-like--Fibronectin type III-- 53335_54928_ 53335_54928_ E_4 3_1_2 4 A_733 B_3918 E_2070 --A_6 B_60 E_3471 -- endn endc_99999 NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--RNA-binding domain, RBD-- 51735_52047_ 51735_52047_ E_2 3_2_1 2 A_993 B_8798 E_3827 --A_9 B_93 E_2576 -- 50129_endn endc NOTPDB CPL NAD(P)-binding Rossmann-fold domains--RNI-like-- 50405_51445_ 50405_51445_ E_3 5_3_2 3 A_2 B_20 E_82 --A_89 B_1646 E_1474 -- endn_51445_99999 50405_endc NOTPDB CPL Actin-crosslinking proteins--(Trans)glycosidases-- 51283_50630_ 51283_50630_ E_50 5_3_2 50 A_25 B_160 E_82 --A_15 B_69 E_1046 -- endn_47353_99999 56672_endc NOTPDB CPL Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase)--Acid proteases-- 50978_52540_ 50978_52540_ E_2 4_2_2 2 A_7 B_101 E_3576 --A_2129 B_14320 E_12913 -- endn_56112 52540_81767 NOTPDB CPL WD40-repeat--P-loop containing nucleotide triphosphate hydrolases-- 57184_50969_ 57184_50969_ E_2 4_2_2 2 B_4 E_859 --A_24 B_218 E_336 -- 57196_99999 57196_endc NOTPDB CPL Growth factor receptor domain--YVTN repeat-like/Quinoprotein amine dehydrogenase-- 57302_48619_ 57302_48619_ E_5 3_2_1 5 A_3 B_7 E_578 --B_72 E_158 -- endn_99999 endc NOTPDB CPL Snake toxin-like--Phospholipase A2, PLA2-- 50249_48439_ 50249_48439_ E_2 3_2_1 2 A_390 B_2734 E_1438 --A_48 B_249 E_670 -- 50249_endn endc NOTPDB CPL Nucleic acid-binding proteins--Protein prenylyltransferase-- 48695_57716_ 48695_57716_ E_29 6_4_2 29 A_18 B_378 E_163 --A_72 B_426 E_2067 -- endn_57716_50156_99999 57716_99999 NOTPDB CPL Multiheme cytochromes--Glucocorticoid receptor-like (DNA-binding domain)-- 57903_57850_ 57903_57850_ E_12 5_2_3 12 A_56 B_38 E_1435 --A_19 B_52 E_3605 -- endn_99999 57903_57283_99999 NOTPDB CPL FYVE/PHD zinc finger--RING finger domain, C3HC4-- 56672_56349_ 56672_56349_ E_2 3_2_1 2 A_66 B_378 E_3164 --A_59 B_801 E_85 -- 57756_55315 endc NOTPDB CPL DNA/RNA polymerases--DNA breaking-rejoining enzymes-- 81698_81698_ 81698_81698_ E_40 6_3_3 40 B_1 E_63 --B_1 E_63 -- 81698_endn_99999 81698_endc_99999 NOTPDB RPT FF domain--FF domain-- 81324_81327_ 81324_81327_ E_44 5_2_3 44 A_34 B_130 E_1059 --E_49 -- endn_99999 47266_endc_99999 NOTPDB CPL Voltage-gated potassium channels--Small-conductance potassium channel-- 54211_52540_ 54211_52540_ E_2 3_1_2 2 A_200 B_1096 E_669 --A_2129 B_14320 E_12913 -- endn 55060_50447 NOTPDB CPL Ribosomal protein S5 domain 2-like--P-loop containing nucleotide triphosphate hydrolases-- 52518_52374_ 52518_52374_ E_2 3_1_2 2 A_239 B_1128 E_328 --A_247 B_1540 E_642 -- endn endc_50715 NOTPDB CPL Thiamin diphosphate-binding fold (THDP-binding)--Nucleotidylyl transferase-- 57302_57535_ 57302_57535_ E_6 7_3_4 6 A_3 B_7 E_578 --B_3 E_582 -- endn_53300_99999 endc_53300_57535_99999 NOTPDB CPL Snake toxin-like--Complement control module/SCR domain-- 53300_57184_ 53300_57184_ E_11 6_2_4 11 A_51 B_345 E_996 --B_4 E_859 -- endn_99999 57196_endc_99999_57535 NOTPDB CPL vWA-like--Growth factor receptor domain-- 47686_47686_ 47686_47686_ E_5 3_1_2 5 E_41 --E_41 -- endn 57196_57184 NOTPDB RPT Anaphylotoxins (complement system)--Anaphylotoxins (complement system)-- 57850_50978_ 57850_50978_ E_6 3_2_1 6 A_19 B_52 E_3605 --A_7 B_101 E_3576 -- endn_99999 endc NOTPDB CPL RING finger domain, C3HC4--WD40-repeat-- 55729_47370_ 55729_47370_ E_21 4_2_2 21 A_217 B_2438 E_800 --A_3 B_4 E_452 -- endn_99999 52540_endc NOTPDB CPL Acyl-CoA N-acyltransferases (Nat)--Bromodomain-- 54001_52540_ 54001_52540_ E_3 4_2_2 3 A_60 B_262 E_1838 --A_2129 B_14320 E_12913 -- 54001_endn endc_99999 NOTPDB CPL Cysteine proteinases--P-loop containing nucleotide triphosphate hydrolases-- 50978_57903_ 50978_57903_ E_14 4_2_2 14 A_7 B_101 E_3576 --A_56 B_38 E_1435 -- 81837_endn endc_99999 NOTPDB CPL WD40-repeat--FYVE/PHD zinc finger-- 49854_50494_ 49854_50494_ E_9 5_3_2 9 B_1 E_636 --A_19 B_482 E_1600 -- endn_49854_99999 endc_99999 NOTPDB CPL Spermadhesin, CUB domain--Trypsin-like serine proteases-- 55394_55394_ 55394_55394_ E_51 4_2_2 51 A_2 B_5 E_106 --A_2 B_5 E_106 -- endn_99999 endc_99999 INPDB RPT Bactericidal permeability-increasing protein, BPI--Bactericidal permeability-increasing protein, BPI-- 63393_57783_ 63393_57783_ E_8 3_2_1 8 A_121 B_137 E_69 --A_193 B_620 E_393 -- endn_99999 endc NOTPDB CPL RBP12 subunit of RNA polymerase II--Zinc beta-ribbon-- 47473_47240_ 47473_47240_ E_2 4_2_2 2 A_51 B_190 E_2808 --A_126 B_660 E_337 -- endn_99999 endc_99999 NOTPDB CPL EF-hand--Ferritin-like-- 48350_48350_ 48350_48350_ E_2 3_1_2 2 B_8 E_786 --B_8 E_786 -- endn 50729_endc NOTPDB RPT GTPase activation domain, GAP--GTPase activation domain, GAP-- 54975_48726_ 54975_48726_ E_4 3_1_2 4 A_27 B_115 E_43 --A_14 B_78 E_4071 -- endn 48726_endc NOTPDB CPL Acylphosphatase-like--Immunoglobulin-- 54452_48726_ 54452_48726_ E_120 4_2_2 120 A_4 B_29 E_375 --A_14 B_78 E_4071 -- endn_99999 endc_99999 INPDB CPL MHC antigen-recognition domain--Immunoglobulin-- 63748_57903_ 63748_57903_ E_14 5_2_3 14 A_4 B_5 E_441 --A_56 B_38 E_1435 -- endn_99999 57903_endc_99999 NOTPDB CPL Tudor/PWWP--FYVE/PHD zinc finger-- 48403_56235_ 48403_56235_ E_2 4_2_2 2 A_4 B_168 E_2348 --A_157 B_611 E_596 -- endn_99999 55811_99999 NOTPDB CPL Ankyrin repeat--N-terminal nucleophile aminohydrolases (Ntn hydrolases)-- 57196_48726_ 57196_48726_ E_19 10_6_4 19 A_2 B_7 E_2358 --A_14 B_78 E_4071 -- 57196_endn_57467_57184_57535_99999 48726_endc_49265_99999 NOTPDB CPL EGF/Laminin--Immunoglobulin-- 81383_51126_ 81383_51126_ E_4 4_2_2 4 B_8 E_2068 --A_116 B_481 E_444 -- endn_99999 51126_endc NOTPDB CPL F-box domain--Pectin lyase-like-- 46785_48350_ 46785_48350_ E_13 5_2_3 13 A_1241 B_7979 E_2143 --B_8 E_786 -- endn_99999 endc_81923_99999 NOTPDB CPL "Winged helix" DNA-binding domain--GTPase activation domain, GAP-- 51695_49562_ 51695_49562_ E_98 7_4_3 98 A_5 B_143 E_312 --B_12 E_1627 -- 52540_endn_47473_99999 endc_51695_99999 INPDB CPL Phosphatidylinositol-specific phospholipase C (PI-PLC)--C2 domain (Calcium/lipid-binding domain, CaLB)-- 56672_56112_ 56672_56112_ E_4 4_3_1 4 A_66 B_378 E_3164 --A_114 B_971 E_9319 -- endn_99999_56112 endc NOTPDB CPL DNA/RNA polymerases--Protein kinase-like (PK-like)-- 57667_48695_ 57667_48695_ E_3 4_2_2 3 A_23 B_24 E_4849 --A_18 B_378 E_163 -- 57667_99999 57667_99999 NOTPDB CPL C2H2 and C2HC zinc fingers--Multiheme cytochromes-- 49879_56784_ 49879_56784_ E_7 3_1_2 7 A_4 B_172 E_486 --A_230 B_1745 E_1267 -- endn 52540_99999 NOTPDB CPL SMAD/FHA domain--HAD-like-- 49695_50370_ 49695_50370_ E_9 3_2_1 9 A_3 B_27 E_141 --B_67 E_219 -- endn_99999 endc NOTPDB CPL gamma-Crystallin-like--Ricin B-like lectins-- 47473_47576_ 47473_47576_ E_30 4_2_2 30 A_51 B_190 E_2808 --B_8 E_704 -- endn_99999 47576_endc NOTPDB CPL EF-hand--Calponin-homology domain, CH-domain-- 81585_81301_ 81585_81301_ E_27 3_2_1 27 A_3 B_9 E_30 --A_169 B_325 E_254 -- endn_47802 endc INPDB CPL DNA polymerase beta-like, second domain--Nucleotidyltransferase-- 52540_56752_ 52540_56752_ E_3 3_2_1 3 A_2129 B_14320 E_12913 --A_13 B_204 E_67 -- endn_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--D-aminoacid aminotransferase-like PLP-dependent enzymes-- 48726_57535_ 48726_57535_ E_3 4_2_2 3 A_14 B_78 E_4071 --B_3 E_582 -- endn_99999 48726_57535 NOTPDB CPL Immunoglobulin--Complement control module/SCR domain-- 52058_56219_ 52058_56219_ E_8 4_2_2 8 A_6 B_143 E_2568 --A_14 B_311 E_899 -- endn_99999 endc_99999 NOTPDB CPL L domain-like--DNase I-like-- 57424_57424_ 57424_57424_ E_295 33_18_15 295 E_497 --E_497 -- 57424_endn_63825_57184_47473_57283_63829_57625_57196_48726_56487_50911_57567_63501_57667_49854_57501_99999 56436_81321_57424_50494_57184_47473_endc_49854_57535_82895_57196_56487_99999_57414_50911 INPDB RPT LDL receptor-like module--LDL receptor-like module-- 57667_54001_ 57667_54001_ E_3 4_2_2 3 A_23 B_24 E_4849 --A_60 B_262 E_1838 -- endn_57667 57667_endc NOTPDB CPL C2H2 and C2HC zinc fingers--Cysteine proteinases-- 64501_68906_ 64501_68906_ E_11 3_2_1 11 A_3 B_31 E_63 --A_1 B_8 E_121 -- endn_68906 endc INPDB CPL Ku heterodimer subunits--SAP domain-- 47473_51197_ 47473_51197_ E_6 4_2_2 6 A_51 B_190 E_2808 --A_15 B_244 E_617 -- 51197_endn endc_99999 NOTPDB CPL EF-hand--Clavaminate synthase-like-- 57667_50939_ 57667_50939_ E_7 5_3_2 7 A_23 B_24 E_4849 --A_3 B_134 E_129 -- endn_57667_99999 57667_endc NOTPDB CPL C2H2 and C2HC zinc fingers--Sialidases (neuraminidases)-- 57903_55729_ 57903_55729_ E_11 5_3_2 11 A_56 B_38 E_1435 --A_217 B_2438 E_800 -- endn_57903_99999 endc_99999 NOTPDB CPL FYVE/PHD zinc finger--Acyl-CoA N-acyltransferases (Nat)-- 51905_69572_ 51905_69572_ E_4 4_2_2 4 A_358 B_2910 E_1243 --A_24 B_156 E_175 -- endn_99999 endc_99999 NOTPDB CPL FAD/NAD(P)-binding domain--Molybdenum cofactor biosynthesis protein MoeB-- 57924_57924_ 57924_57924_ E_37 6_3_3 37 B_1 E_142 --B_1 E_142 -- 57924_endn_99999 57924_endc_99999 NOTPDB RPT Inhibitor of apoptosis (IAP) repeat--Inhibitor of apoptosis (IAP) repeat-- 47576_47576_ 47576_47576_ E_204 10_5_5 204 B_8 E_704 --B_8 E_704 -- endn_47576_50729_47473_99999 46966_81296_47576_endc_99999 INPDB RPT Calponin-homology domain, CH-domain--Calponin-homology domain, CH-domain-- 50199_50199_ 50199_50199_ E_3 3_1_2 3 A_8 B_65 E_35 --A_8 B_65 E_35 -- endn endc_99999 NOTPDB RPT Staphylococcal nuclease--Staphylococcal nuclease-- 69065_69065_ 69065_69065_ E_17 5_2_3 17 B_129 E_71 --B_129 E_71 -- endn_99999 54768_endc_99999 NOTPDB RPT RNase III endonuclease catalytic domain--RNase III endonuclease catalytic domain-- 49899_63887_ 49899_63887_ E_51 5_3_2 51 A_22 B_208 E_1314 --E_52 -- endn_55753_99999 endc_99999 INPDB CPL Concanavalin A-like lectins/glucanases--P-domain of calnexin/calreticulin-- 53300_69179_ 53300_69179_ E_35 5_3_2 35 A_51 B_345 E_996 --A_2 B_11 E_172 -- endn_69179_99999 57196_99999 INPDB CPL vWA-like--Integrin domains-- 56112_56954_ 56112_56954_ E_3 3_2_1 3 A_114 B_971 E_9319 --B_451 E_40 -- endn_99999 endc NOTPDB CPL Protein kinase-like (PK-like)--Integral outer membrane protein TolC, efflux pump component-- 50044_50156_ 50044_50156_ E_14 4_2_2 14 A_2 B_84 E_1671 --A_28 B_534 E_1380 -- endn_99999 endc_99999 NOTPDB CPL SH3-domain--PDZ domain-like-- 47986_48726_ 47986_48726_ E_8 4_2_2 8 A_8 B_32 E_410 --A_14 B_78 E_4071 -- endn_99999 52129_48726 NOTPDB CPL DEATH domain--Immunoglobulin-- 48726_54957_ 48726_54957_ E_4 3_2_1 4 A_14 B_78 E_4071 --B_3 E_9 -- endn_99999 endc NOTPDB CPL Immunoglobulin--Viral DNA-binding domain-- 47027_50965_ 47027_50965_ E_3 3_1_2 3 A_1 B_21 E_118 --A_4 B_35 E_898 -- endn endc_99999 NOTPDB CPL Acyl-CoA binding protein--Galactose oxidase, central domain-- 49417_47719_ 49417_47719_ E_20 4_2_2 20 A_10 B_39 E_458 --E_22 -- endn_99999 endc_99999 NOTPDB CPL p53-like transcription factors--p53 tetramerization domain-- 52047_48726_ 52047_48726_ E_39 6_2_4 39 A_9 B_93 E_2576 --A_14 B_78 E_4071 -- endn_99999 48726_endc_49265_99999 NOTPDB CPL RNI-like--Immunoglobulin-- 57440_56988_ 57440_56988_ E_2 3_1_2 2 A_6 B_6 E_228 --B_20 E_4 -- endn 69848_endc NOTPDB CPL Kringle-like--Anthrax protective antigen-- 53795_52047_ 53795_52047_ E_3 3_2_1 3 A_421 B_3843 E_485 --A_9 B_93 E_2576 -- 52540_53187 endc NOTPDB CPL PEP carboxykinase-like--RNI-like-- 64356_49447_ 64356_49447_ E_79 5_2_3 79 A_9 B_8 E_400 --E_140 -- endn_99999 endc_99999_53187 INPDB CPL SNARE-like--Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor-- 50969_57196_ 50969_57196_ E_11 7_4_3 11 A_24 B_218 E_336 --A_2 B_7 E_2358 -- 57196_57610_57184_99999 57196_endc_99999 NOTPDB CPL YVTN repeat-like/Quinoprotein amine dehydrogenase--EGF/Laminin-- 57302_57302_ 57302_57302_ E_44 7_4_3 44 A_3 B_7 E_578 --A_3 B_7 E_578 -- 57302_57196_endn_99999 57302_endc_99999 NOTPDB RPT Snake toxin-like--Snake toxin-like-- 53335_56235_ 53335_56235_ E_3 4_2_2 3 A_733 B_3918 E_2070 --A_157 B_611 E_596 -- endn_50729 56235_endc NOTPDB CPL S-adenosyl-L-methionine-dependent methyltransferases--N-terminal nucleophile aminohydrolases (Ntn hydrolases)-- 50729_50156_ 50729_50156_ E_16 6_4_2 16 A_14 B_44 E_3057 --A_28 B_534 E_1380 -- endn_50729_47031_99999 50156_99999 NOTPDB CPL PH domain-like--PDZ domain-like-- 57196_57581_ 57196_57581_ E_50 7_4_3 50 A_2 B_7 E_2358 --B_2 E_61 -- 57196_57184_57581_99999 57196_57184_99999 NOTPDB CPL EGF/Laminin--TB module/8-cys domain-- 49265_57603_ 49265_57603_ E_4 4_2_2 4 A_23 B_135 E_1734 --B_1 E_56 -- 99999_49265 57603_endc NOTPDB CPL Fibronectin type III--Fibronectin type I module-- 57196_49482_ 57196_49482_ E_2 3_2_1 2 A_2 B_7 E_2358 --A_2 B_98 E_31 -- endn_99999 endc NOTPDB CPL EGF/Laminin--Aromatic compound dioxygenase-- 57625_57625_ 57625_57625_ E_122 10_5_5 122 B_2 E_246 --B_2 E_246 -- 57625_57440_endn_51445_99999 57625_57424_endc_51445_99999 NOTPDB RPT Tachycitin--Tachycitin-- 48439_48695_ 48439_48695_ E_3 3_2_1 3 A_48 B_249 E_670 --A_18 B_378 E_163 -- endn_99999 endc NOTPDB CPL Protein prenylyltransferase--Multiheme cytochromes-- 46774_48371_ 46774_48371_ E_4 3_1_2 4 B_3 E_174 --A_73 B_255 E_3951 -- endn 46785_99999 NOTPDB CPL ARID-like--ARM repeat-- 57933_47040_ 57933_47040_ E_4 4_2_2 4 E_51 --A_1 B_1 E_50 -- endn_99999 endc_47040 NOTPDB CPL TAZ domain--Kix domain of CBP (creb binding protein)-- 49785_53187_ 49785_53187_ E_16 5_2_3 16 A_10 B_366 E_724 --A_105 B_1042 E_648 -- endn_99999 49464_endc_99999 NOTPDB CPL Galactose-binding domain-like--Zn-dependent exopeptidases-- 57467_47473_ 57467_47473_ E_28 8_4_4 28 A_2 B_8 E_358 --A_51 B_190 E_2808 -- 57196_endn_48726_99999 57610_48726_endc_57283 INPDB CPL Ovomucoid/PCI-1 like inhibitors--EF-hand-- 50044_52540_ 50044_52540_ E_103 6_4_2 103 A_2 B_84 E_1671 --A_2129 B_14320 E_12913 -- 81343_endn_50156_99999 endc_99999 INPDB CPL SH3-domain--P-loop containing nucleotide triphosphate hydrolases-- 56436_57424_ 56436_57424_ E_7 4_2_2 7 A_2 B_62 E_1409 --E_497 -- endn_99999 49854_99999 NOTPDB CPL C-type lectin-like--LDL receptor-like module-- 48403_52540_ 48403_52540_ E_27 8_5_3 27 A_4 B_168 E_2348 --A_2129 B_14320 E_12913 -- 52047_52540_endn_48403_99999 52540_endc_99999 NOTPDB CPL Ankyrin repeat--P-loop containing nucleotide triphosphate hydrolases-- 52768_52768_ 52768_52768_ E_4 4_2_2 4 A_48 B_175 E_239 --A_48 B_175 E_239 -- endn_99999 endc_99999 NOTPDB RPT Arginase/deacetylase--Arginase/deacetylase-- 57196_69304_ 57196_69304_ E_5 6_3_3 5 A_2 B_7 E_2358 --A_4 B_18 E_43 -- 57196_57424_99999 57196_50969_99999 NOTPDB CPL EGF/Laminin--Tricorn protease N-terminal domain-- 64268_48452_ 64268_48452_ E_4 3_2_1 4 B_5 E_392 --A_146 B_1937 E_3442 -- endn_99999 endc NOTPDB CPL PX domain--TPR-like-- 54791_51569_ 54791_51569_ E_5 3_2_1 5 A_38 B_130 E_562 --A_136 B_1089 E_356 -- endn_99999 endc NOTPDB CPL Eukaryotic type KH-domain (eKH-domain)--Aldolase-- 48452_57501_ 48452_57501_ E_2 3_2_1 2 A_146 B_1937 E_3442 --A_1 B_17 E_479 -- 48452_99999 endc NOTPDB CPL TPR-like--Cystine-knot cytokines-- 50911_57424_ 50911_57424_ E_4 4_2_2 4 E_86 --E_497 -- endn_47473 57424_99999 NOTPDB CPL Mannose 6-phosphate receptor domain--LDL receptor-like module-- 47655_49417_ 47655_49417_ E_35 5_3_2 35 A_3 B_5 E_84 --A_10 B_39 E_458 -- 48092_endn_99999 endc_55550 INPDB CPL STAT--p53-like transcription factors-- 50978_48371_ 50978_48371_ E_12 5_2_3 12 A_7 B_101 E_3576 --A_73 B_255 E_3951 -- endn_99999 endc_99999_63829 NOTPDB CPL WD40-repeat--ARM repeat-- 50044_55550_ 50044_55550_ E_226 11_6_5 226 A_2 B_84 E_1671 --A_4 B_15 E_910 -- endn_50729_50044_57889_55550_99999 50729_50044_endc_99999_56112 INPDB CPL SH3-domain--SH2 domain-- 48403_52113_ 48403_52113_ E_11 5_2_3 11 A_4 B_168 E_2348 --A_1 B_117 E_366 -- endn_99999 52113_51246_99999 NOTPDB CPL Ankyrin repeat--BRCT domain-- 51045_56204_ 51045_56204_ E_66 4_3_1 66 B_5 E_413 --A_2 E_276 -- endn_51045_99999 endc NOTPDB CPL WW domain--Ubiquitin-protein ligase E3a, Hect catalytic domain (E6ap)-- 54236_46689_ 54236_46689_ E_2 4_2_2 2 A_18 B_81 E_1815 --A_246 B_4125 E_4002 -- endn_99999 endc_99999 NOTPDB CPL Ubiquitin-like--Homeodomain-like-- 57424_49854_ 57424_49854_ E_22 8_5_3 22 E_497 --B_1 E_636 -- 56436_57424_82671_endn_49854 57424_49854_99999 NOTPDB CPL LDL receptor-like module--Spermadhesin, CUB domain-- 50729_52540_ 50729_52540_ E_25 5_2_3 25 A_14 B_44 E_3057 --A_2129 B_14320 E_12913 -- endn_99999 endc_49879_99999 NOTPDB CPL PH domain-like--P-loop containing nucleotide triphosphate hydrolases-- 81383_81383_ 81383_81383_ E_5 3_1_2 5 B_8 E_2068 --B_8 E_2068 -- endn 52047_99999 NOTPDB RPT F-box domain--F-box domain-- 47661_51126_ 47661_51126_ E_2 3_2_1 2 A_6 B_43 E_303 --A_116 B_481 E_444 -- endn_99999 endc NOTPDB CPL t-snare proteins--Pectin lyase-like-- 51206_56112_ 51206_56112_ E_30 4_3_1 30 A_2 B_447 E_467 --A_114 B_971 E_9319 -- 51206_endn_99999 endc NOTPDB CPL cAMP-binding domain-like--Protein kinase-like (PK-like)-- 48403_57903_ 48403_57903_ E_13 4_2_2 13 A_4 B_168 E_2348 --A_56 B_38 E_1435 -- endn_48403 endc_99999 NOTPDB CPL Ankyrin repeat--FYVE/PHD zinc finger-- 50965_56436_ 50965_56436_ E_5 4_2_2 5 A_4 B_35 E_898 --A_2 B_62 E_1409 -- 57196_endn 57184_99999 NOTPDB CPL Galactose oxidase, central domain--C-type lectin-like-- 47986_52540_ 47986_52540_ E_28 8_3_5 28 A_8 B_32 E_410 --A_2129 B_14320 E_12913 -- 47986_endn_99999 52540_52047_53795_endc_99999 NOTPDB CPL DEATH domain--P-loop containing nucleotide triphosphate hydrolases-- 49410_50242_ 49410_50242_ E_18 3_2_1 18 A_1 B_2 E_109 --A_2 B_2 E_148 -- 48239_99999 endc NOTPDB CPL Alpha-macroglobulin receptor domain--TIMP-like-- 47459_55021_ 47459_55021_ E_8 4_3_1 8 A_3 B_10 E_1147 --A_109 B_662 E_147 -- endn_54373_99999 endc NOTPDB CPL Helix-loop-helix DNA-binding domain--Regulatory domain in the aminoacid metabolism-- 49562_49562_ 49562_49562_ E_380 8_3_5 380 B_12 E_1627 --B_12 E_1627 -- endn_49562_99999 49562_53300_endc_48350_99999 INPDB RPT C2 domain (Calcium/lipid-binding domain, CaLB)--C2 domain (Calcium/lipid-binding domain, CaLB)-- 48371_50939_ 48371_50939_ E_2 3_2_1 2 A_73 B_255 E_3951 --A_3 B_134 E_129 -- endn_99999 endc NOTPDB CPL ARM repeat--Sialidases (neuraminidases)-- 56112_54928_ 56112_54928_ E_6 4_2_2 6 A_114 B_971 E_9319 --A_6 B_60 E_3471 -- endn_99999 endc_99999 NOTPDB CPL Protein kinase-like (PK-like)--RNA-binding domain, RBD-- 57850_57903_ 57850_57903_ E_30 8_3_5 30 A_19 B_52 E_3605 --A_56 B_38 E_1435 -- endn_57903_99999 57667_57903_endc_63748_99999 NOTPDB CPL RING finger domain, C3HC4--FYVE/PHD zinc finger-- 50729_55550_ 50729_55550_ E_11 6_3_3 11 A_14 B_44 E_3057 --A_4 B_15 E_910 -- endn_51695_99999 endc_55550_99999 NOTPDB CPL PH domain-like--SH2 domain-- 74788_75632_ 74788_75632_ E_109 5_2_3 109 B_2 E_132 --A_1 B_1 E_144 -- endn_99999 endc_46785_99999 INPDB CPL Culin repeat--Culin homology domain-- 46565_52833_ 46565_52833_ E_24 5_2_3 24 A_12 B_326 E_827 --A_220 B_2517 E_2068 -- endn_99999 52833_endc_99999 NOTPDB CPL Chaperone J-domain--Thioredoxin-like-- 47060_47060_ 47060_47060_ E_8 5_3_2 8 A_18 B_103 E_93 --A_18 B_103 E_93 -- 47060_50715_99999 47060_endc NOTPDB RPT S15/NS1 RNA-binding domain--S15/NS1 RNA-binding domain-- 50729_57903_ 50729_57903_ E_43 7_3_4 43 A_14 B_44 E_3057 --A_56 B_38 E_1435 -- endn_48065_99999 57903_50729_endc_99999 NOTPDB CPL PH domain-like--FYVE/PHD zinc finger-- 47459_55785_ 47459_55785_ E_99 6_2_4 99 A_3 B_10 E_1147 --A_168 B_1284 E_394 -- endn_99999 63380_endc_55785_99999 NOTPDB CPL Helix-loop-helix DNA-binding domain--PYP-like sensor domain (PAS domain)-- 57196_56436_ 57196_56436_ E_29 9_5_4 29 A_2 B_7 E_2358 --A_2 B_62 E_1409 -- 57196_56436_endn_55797_99999 57196_endc_99999_57535 NOTPDB CPL EGF/Laminin--C-type lectin-like-- 50978_51004_ 50978_51004_ E_10 5_3_2 10 A_7 B_101 E_3576 --A_2 B_13 E_266 -- endn_50969_99999 endc_99999 NOTPDB CPL WD40-repeat--C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase-- 52374_52374_ 52374_52374_ E_19 3_2_1 19 A_247 B_1540 E_642 --A_247 B_1540 E_642 -- endn_99999 endc NOTPDB RPT Nucleotidylyl transferase--Nucleotidylyl transferase-- 46585_46585_ 46585_46585_ E_35 6_3_3 35 B_6 E_126 --B_6 E_126 -- 46585_endn_99999 46585_49562_99999 NOTPDB RPT Effector domain of the protein kinase pkn/prk1--Effector domain of the protein kinase pkn/prk1-- 82615_82615_ 82615_82615_ E_7 4_2_2 7 A_1 B_2 E_41 --A_1 B_2 E_41 -- 56112_99999 endc_99999 NOTPDB RPT Polo domain--Polo domain-- 48350_50044_ 48350_50044_ E_22 4_2_2 22 B_8 E_786 --A_2 B_84 E_1671 -- endn_99999 endc_99999 NOTPDB CPL GTPase activation domain, GAP--SH3-domain-- 52540_46565_ 52540_46565_ E_7 3_1_2 7 A_2129 B_14320 E_12913 --A_12 B_326 E_827 -- endn endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Chaperone J-domain-- 64268_50044_ 64268_50044_ E_24 7_3_4 24 B_5 E_392 --A_2 B_84 E_1671 -- endn_50044_99999 50044_endc_99999_48350 NOTPDB CPL PX domain--SH3-domain-- 54452_81296_ 54452_81296_ E_134 5_2_3 134 A_4 B_29 E_375 --A_40 B_404 E_1207 -- endn_99999 54452_endc_99999 INPDB CPL MHC antigen-recognition domain--E set domains-- 81296_48403_ 81296_48403_ E_4 5_3_2 4 A_40 B_404 E_1207 --A_4 B_168 E_2348 -- 52540_49417_99999 endc_99999 NOTPDB CPL E set domains--Ankyrin repeat-- 57501_57593_ 57501_57593_ E_10 3_2_1 10 A_1 B_17 E_479 --E_13 -- endn_99999 endc NOTPDB CPL Cystine-knot cytokines--Heparin-binding domain from vascular endothelial growth factor-- 50630_47220_ 50630_47220_ E_6 3_1_2 6 A_15 B_69 E_1046 --A_6 B_4 E_147 -- endn 56672_endc NOTPDB CPL Acid proteases--alpha-catenin/vinculin-- 53448_63380_ 53448_63380_ E_3 3_1_2 3 A_346 B_1868 E_1125 --A_34 B_499 E_327 -- endn 52343_99999 NOTPDB CPL Nucleotide-diphospho-sugar transferases--Riboflavin synthase domain-like-- 55550_50729_ 55550_50729_ E_37 7_4_3 37 A_4 B_15 E_910 --A_14 B_44 E_3057 -- endn_50044_55550_99999 49562_endc_99999 NOTPDB CPL SH2 domain--PH domain-like-- 52374_50677_ 52374_50677_ E_4 3_2_1 4 A_247 B_1540 E_642 --A_53 B_299 E_143 -- endn_99999 endc NOTPDB CPL Nucleotidylyl transferase--ValRS/IleRS/LeuRS editing domain-- 52540_48264_ 52540_48264_ E_2 3_2_1 2 A_2129 B_14320 E_12913 --A_9 B_219 E_1721 -- endn_99999 endc NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Cytochrome P450-- 56112_55681_ 56112_55681_ E_14 4_2_2 14 A_114 B_971 E_9319 --A_205 B_1250 E_450 -- 56112_99999 52954_99999 NOTPDB CPL Protein kinase-like (PK-like)--Class II aaRS and biotin synthetases-- 52374_50249_ 52374_50249_ E_7 3_2_1 7 A_247 B_1540 E_642 --A_390 B_2734 E_1438 -- endn_99999 endc NOTPDB CPL Nucleotidylyl transferase--Nucleic acid-binding proteins-- 57802_57903_ 57802_57903_ E_2 4_2_2 2 A_77 B_171 E_177 --A_56 B_38 E_1435 -- endn_99999 endc_57802 NOTPDB CPL Rubredoxin-like--FYVE/PHD zinc finger-- 57424_56487_ 57424_56487_ E_26 7_4_3 26 E_497 --B_1 E_193 -- 57424_49854_57414_99999 57424_50494_endc NOTPDB CPL LDL receptor-like module--Scavenger receptor cysteine-rich (SRCR) domain-- 54928_52047_ 54928_52047_ E_8 5_2_3 8 A_6 B_60 E_3471 --A_9 B_93 E_2576 -- endn_99999 54427_endc_99999 NOTPDB CPL RNA-binding domain, RBD--RNI-like-- 63877_81321_ 63877_81321_ E_21 4_2_2 21 A_1 E_30 --A_7 B_20 E_8234 -- endn_99999 endc_99999 NOTPDB CPL Methuselah ectodomain--Family A G protein-coupled receptor-like-- 57535_50370_ 57535_50370_ E_2 4_2_2 2 B_3 E_582 --B_67 E_219 -- 57535_99999 endc_99999 NOTPDB CPL Complement control module/SCR domain--Ricin B-like lectins-- 48726_52200_ 48726_52200_ E_2 3_1_2 2 A_14 B_78 E_4071 --A_2 B_41 E_302 -- endn 48726_endc NOTPDB CPL Immunoglobulin--Toll/Interleukin receptor TIR domain-- 56672_56219_ 56672_56219_ E_6 5_3_2 6 A_66 B_378 E_3164 --A_14 B_311 E_899 -- 50630_endn_99999 56672_99999 NOTPDB CPL DNA/RNA polymerases--DNase I-like-- 49562_48350_ 49562_48350_ E_59 7_4_3 59 B_12 E_1627 --B_8 E_786 -- endn_50729_49562_99999 50729_endc_99999 NOTPDB CPL C2 domain (Calcium/lipid-binding domain, CaLB)--GTPase activation domain, GAP-- 82895_57535_ 82895_57535_ E_9 6_3_3 9 E_618 --B_3 E_582 -- 57196_endn_82895 53300_57535_99999 NOTPDB CPL TSP-1 type 1 repeat--Complement control module/SCR domain-- 46934_47473_ 46934_47473_ E_7 4_1_3 7 A_21 B_114 E_420 --A_51 B_190 E_2808 -- endn 54452_endc_99999 NOTPDB CPL UBA-like--EF-hand-- 56436_49854_ 56436_49854_ E_61 7_3_4 61 A_2 B_62 E_1409 --B_1 E_636 -- 56436_endn_99999 56436_endc_49854_99999 NOTPDB CPL C-type lectin-like--Spermadhesin, CUB domain-- 52075_54427_ 52075_54427_ E_7 5_3_2 7 B_3 E_104 --A_11 B_446 E_248 -- 54928_endn_99999 46934_endc NOTPDB CPL Outer arm dynein light chain 1--NTF2-like-- 48092_47655_ 48092_47655_ E_31 4_2_2 31 A_1 B_1 E_33 --A_3 B_5 E_84 -- 48092_endn endc_49417 NOTPDB CPL Transcription factor STAT-4 N-domain--STAT-- 57889_57889_ 57889_57889_ E_217 16_10_6 217 A_7 B_6 E_663 --A_7 B_6 E_663 -- endn_81296_50729_49899_47473_57903_49562_57889_99999_57850 57903_49562_endc_57889_56112_99999 NOTPDB RPT Cysteine-rich domain--Cysteine-rich domain-- 51604_53474_ 51604_53474_ E_3 5_3_2 3 A_64 B_382 E_137 --A_141 B_2949 E_2909 -- endn_54826_99999 endc_99999 NOTPDB CPL Enolase C-terminal domain-like--alpha/beta-Hydrolases-- 47459_52540_ 47459_52540_ E_2 4_2_2 2 A_3 B_10 E_1147 --A_2129 B_14320 E_12913 -- endn_99999 endc_99999 NOTPDB CPL Helix-loop-helix DNA-binding domain--P-loop containing nucleotide triphosphate hydrolases-- 55856_48371_ 55856_48371_ E_11 3_2_1 11 A_5 B_20 E_198 --A_73 B_255 E_3951 -- endn_99999 endc NOTPDB CPL Cytochrome b5--ARM repeat-- 81301_81631_ 81301_81631_ E_34 4_2_2 34 A_169 B_325 E_254 --B_2 E_37 -- endn_99999 endc_55003 INPDB CPL Nucleotidyltransferase--Poly(A) polymerase, middle domain-- 57716_57716_ 57716_57716_ E_565 23_11_12 565 A_72 B_426 E_2067 --A_72 B_426 E_2067 -- endn_57586_50156_48695_54862_57196_57716_47576_57903_99999_57850 57586_48508_50156_48695_endc_55003_55753_50203_57716_99999_46689_57850 INPDB RPT Glucocorticoid receptor-like (DNA-binding domain)--Glucocorticoid receptor-like (DNA-binding domain)-- 52113_46689_ 52113_46689_ E_7 4_1_3 7 A_1 B_117 E_366 --A_246 B_4125 E_4002 -- endn endc_46689_99999 NOTPDB CPL BRCT domain--Homeodomain-like-- 54495_51735_ 54495_51735_ E_3 3_1_2 3 A_1 B_25 E_676 --A_993 B_8798 E_3827 -- endn endc_56327 NOTPDB CPL UBC-like--NAD(P)-binding Rossmann-fold domains-- 54171_54171_ 54171_54171_ E_35 7_4_3 35 A_2 B_19 E_401 --A_2 B_19 E_401 -- endn_53901_54171_99999 54171_endc_99999 NOTPDB RPT DNA-binding domain--DNA-binding domain-- 52540_52047_ 52540_52047_ E_89 16_9_7 89 A_2129 B_14320 E_12913 --A_9 B_93 E_2576 -- 47226_52047_52540_47162_47986_endn_52200_53098_99999 52047_52540_53795_52058_52075_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--RNI-like-- 57903_50729_ 57903_50729_ E_25 4_2_2 25 A_56 B_38 E_1435 --A_14 B_44 E_3057 -- endn_50729 endc_99999 NOTPDB CPL FYVE/PHD zinc finger--PH domain-like-- 49854_57424_ 49854_57424_ E_44 9_4_5 44 B_1 E_636 --E_497 -- endn_57424_49854_99999 57424_56487_endc_49854_99999 NOTPDB CPL Spermadhesin, CUB domain--LDL receptor-like module-- 49265_48726_ 49265_48726_ E_157 9_4_5 157 A_23 B_135 E_1734 --A_14 B_78 E_4071 -- endn_48726_99999_49265 57196_48726_endc_99999_49265 NOTPDB CPL Fibronectin type III--Immunoglobulin-- 47769_56399_ 47769_56399_ E_6 3_2_1 6 A_6 B_20 E_633 --A_6 B_66 E_201 -- 48403_99999 endc NOTPDB CPL SAM/Pointed domain--ADP-ribosylation-- 48403_74924_ 48403_74924_ E_7 4_2_2 7 A_4 B_168 E_2348 --B_2 E_135 -- endn_99999 74924_99999 NOTPDB CPL Ankyrin repeat--Cap-Gly domain-- 50447_52540_ 50447_52540_ E_9 4_2_2 9 A_102 B_772 E_432 --A_2129 B_14320 E_12913 -- 52540_endn 54980_endc NOTPDB CPL Translation proteins--P-loop containing nucleotide triphosphate hydrolases-- 53067_81383_ 53067_81383_ E_3 3_1_2 3 A_176 B_1667 E_1029 --B_8 E_2068 -- endn endc_99999 NOTPDB CPL Actin-like ATPase domain--F-box domain-- 46934_48452_ 46934_48452_ E_4 3_2_1 4 A_21 B_114 E_420 --A_146 B_1937 E_3442 -- 46934_99999 endc NOTPDB CPL UBA-like--TPR-like-- 57492_82895_ 57492_82895_ E_3 5_2_3 3 B_1 E_71 --E_618 -- endn_57492 endc_99999_82895 NOTPDB CPL Trefoil--TSP-1 type 1 repeat--