52540_52540_ A_484 B_3183 E_2403 158_102_56 6070 A_2129 B_14320 E_12913 --A_2129 B_14320 E_12913 -- 51045_56349_75181_46548_49417_81923_55729_50353_63748_56563_54928_50249_57903_52172_51445_56024_53335_56784_48695_51735_52821_47240_46988_53448_49785_48403_56425_47353_48334_63393_52210_endn_50978_54826_48371_47571_57802_54862_52799_54791_51998_50615_47576_52540_82051_50692_53383_47610_53850_52113_47364_47616_57701_52980_48452_54909_47473_54585_82708_50084_54111_54768_47836_52440_46785_56112_57850_81698_47220_57783_47986_53822_55248_49879_47370_99999_55608_54736_52777_56731_56553_50998_46934_53795_51182_57716_49373_52058_46689_54160_56300_47954_51294_57756_50923_54236_55073_57938_47413_56091_55186_52200 54637_50331_53659_81296_52980_48452_50084_54585_82708_52402_48439_82653_52047_48295_56672_52440_47781_46785_54984_46894_57783_endc_46600_52467_51101_47175_47370_99999_63393_48173_54913_56712_48371_53300_49265_53955_53795_47681_52058_47576_75553_48557_48576_52540_56849_53271_81886_50729_57774_48019_53383_81271_47090_53474_48340_54814 INPDB RPT P-loop containing nucleotide triphosphate hydrolases--P-loop containing nucleotide triphosphate hydrolases-- 57667_57667_ E_3550 49_35_14 3550 A_23 B_24 E_4849 --A_23 B_24 E_4849 -- 47380_54001_63763_50249_51351_56672_57903_48726_57850_54984_57586_57783_52467_50939_99999_endn_82199_54862_54211_55103_47862_57825_50814_81321_57667_57774_53098_53383_81271_56235_49599_56091_53920_57501_56327 51126_54001_53254_57667_48508_57774_57783_endc_53098_49599_57903_48726_50939_99999 INPDB RPT C2H2 and C2HC zinc fingers--C2H2 and C2HC zinc fingers-- 46785_53850_ A_10 B_1888 E_74 10_5_5 1972 A_1241 B_7979 E_2143 --A_257 B_5627 E_740 -- 53649_endn_51735_46785_99999 53383_endc_47240_53955_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Periplasmic binding protein-like II-- 48726_48726_ A_1 B_1 E_1834 36_25_11 1836 A_14 B_78 E_4071 --A_14 B_78 E_4071 -- 56436_57610_endn_57095_57184_47473_57535_49265_57196_52047_82671_54211_48726_52058_56112_54975_53067_53254_47769_50729_51905_64501_47986_99999_48350 50969_56784_endc_64501_82895_49265_57625_52129_48726_99999_56112 INPDB RPT Immunoglobulin--Immunoglobulin-- 47384_55874_ A_44 B_1699 E_52 38_29_9 1795 A_45 B_1750 E_74 --A_178 B_2970 E_398 -- 53681_56176_50405_endn_48613_48452_54909_50998_81648_54211_54695_55781_52172_50447_56837_55785_51197_55052_53271_53167_81340_47323_47226_53383_54631_56059_56601_99999_53850 52540_53271_50341_52172_endc_55874_53850_55785_99999 INPDB CPL Homodimeric domain of signal transducing histidine kinase--ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-- 53067_53067_ A_41 B_772 E_722 22_14_8 1535 A_176 B_1667 E_1029 --A_176 B_1667 E_1029 -- 53067_47113_81383_53335_endn_50978_53756_82317_52058_54285_46785_56112_46689_99999 53067_51658_56778_47473_endc_48439_64356_99999 INPDB RPT Actin-like ATPase domain--Actin-like ATPase domain-- 51735_55347_ A_106 B_791 E_493 13_5_8 1390 A_993 B_8798 E_3827 --A_119 B_836 E_588 -- 53633_50129_51690_endn_99999 55136_51735_endc_53633_55021_69055_54211_99999 INPDB CPL NAD(P)-binding Rossmann-fold domains--Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain-- 46689_46689_ A_1 B_749 E_543 40_21_19 1293 A_246 B_4125 E_4002 --A_246 B_4125 E_4002 -- 52113_51215_endn_52768_50353_51182_56003_52317_52172_46785_55785_46689_52540_51197_47769_51905_47226_54427_57884_53822_99999 48283_47473_56529_55729_51182_55945_46785_46689_53155_56024_46894_57667_55136_47060_endc_53098_49785_53807_99999 INPDB RPT Homeodomain-like--Homeodomain-like-- 54928_54928_ E_1269 20_10_10 1269 A_6 B_60 E_3471 --A_6 B_60 E_3471 -- 54719_endn_48371_53098_54928_54427_48208_55120_53316_99999 52540_54928_51045_54791_54768_57756_56601_endc_63570_99999 INPDB RPT RNA-binding domain, RBD--RNA-binding domain, RBD-- 57196_57196_ E_1157 62_32_30 1157 A_2 B_7 E_2358 --A_2 B_7 E_2358 -- 50969_57424_56436_endn_49899_57362_57095_57184_53597_53300_57630_50370_49265_57535_50630_52047_57196_82671_52799_48726_57467_57581_47686_54511_69179_49854_82895_57302_82153_50939_57501_99999 57440_50969_57610_56436_69687_49899_63825_57184_53300_69304_49265_50370_63829_57535_57196_69322_82671_48726_57467_57581_57567_56112_50494_53613_51735_57016_endc_49785_50965_99999 INPDB RPT EGF/Laminin--EGF/Laminin-- 53901_53901_ A_79 B_777 E_251 17_8_9 1107 A_95 B_891 E_374 --A_95 B_891 E_374 -- 53901_50129_endn_53474_52777_47336_52151_99999 54637_48613_55718_endc_52151_47895_53901_99999_53850 INPDB RPT Thiolase-like--Thiolase-like-- 50129_51735_ A_60 B_725 E_320 21_10_11 1105 A_67 B_883 E_442 --A_993 B_8798 E_3827 -- 54637_53335_endn_51735_49265_50249_53633_53474_53218_99999 50129_54334_51735_endc_52733_52047_51351_53474_55347_47336_99999 INPDB CPL GroES-like--NAD(P)-binding Rossmann-fold domains-- 52540_50447_ A_66 B_626 E_327 20_12_8 1019 A_2129 B_14320 E_12913 --A_102 B_772 E_432 -- 51126_endn_48695_57783_46988_55826_57802_54211_81271_51182_99999_55608 52540_50447_52156_54980_endc_50465_56014_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--Translation proteins-- 52833_47616_ B_388 E_590 14_6_8 978 A_220 B_2517 E_2068 --A_7 B_434 E_765 -- endn_52833_47616_55961_51713_99999 53254_47616_52374_51735_endc_47226_52833_99999 INPDB CPL Thioredoxin-like--Glutathione S-transferase (GST), C-terminal domain-- 49265_49265_ A_3 B_16 E_944 34_20_14 963 A_23 B_135 E_1734 --A_23 B_135 E_1734 -- 57610_endn_81296_57603_49899_57256_57184_53300_49265_57196_51621_52058_48726_49384_57586_81324_57016_53383_50965_99999 49299_57603_51055_53300_endc_49265_57196_48726_69318_56496_51445_48317_99999_56112 INPDB RPT Fibronectin type III--Fibronectin type III-- 51735_48179_ A_65 B_639 E_175 18_8_10 879 A_993 B_8798 E_3827 --A_71 B_674 E_226 -- 53335_52096_endn_53756_51735_51905_48179_99999 54637_50969_51294_51905_51735_endc_48179_52413_51971_99999 INPDB CPL NAD(P)-binding Rossmann-fold domains--6-phosphogluconate dehydrogenase C-terminal domain-like-- 54631_54631_ A_193 B_543 E_127 39_20_19 863 A_209 B_782 E_239 --A_209 B_782 E_239 -- 75138_51206_50129_endn_48371_53686_55486_54862_53697_53795_56672_46785_52540_81340_51735_47413_54631_64182_53474_99999 46626_51230_54637_54001_51412_52402_54211_54791_55021_81301_46785_55874_55785_51735_endc_57783_53448_54631_99999 INPDB RPT CBS-domain--CBS-domain-- 52440_56059_ A_63 B_630 E_149 17_9_8 842 A_71 B_698 E_210 --A_192 B_1104 E_490 -- 51230_endn_48108_53732_52317_48670_52440_99999_53244 51230_51735_endc_48108_51246_52440_52335_99999 INPDB CPL PreATP-grasp domain--Glutathione synthetase ATP-binding domain-like-- 56645_47203_ A_58 B_556 E_216 25_14_11 830 A_70 B_599 E_245 --A_62 B_573 E_243 -- 47203_endn_56801_51735_74778_47413_54292_53822_55856_46955_82919_53850_99999_56112 63411_56645_52467_48239_53795_47203_endc_48317_51679_56854_99999 INPDB CPL Acyl-CoA dehydrogenase NM domain-like--Acyl-CoA dehydrogenase C-terminal domain-like-- 46689_53098_ A_72 B_509 E_164 9_5_4 745 A_246 B_4125 E_4002 --A_290 B_2494 E_2335 -- 52540_endn_46785_46689_99999 50610_endc_56112_99999 NOTPDB CPL Homeodomain-like--Ribonuclease H-like-- 49313_49313_ B_6 E_648 12_6_6 654 A_3 B_17 E_754 --A_3 B_17 E_754 -- endn_57184_51735_49313_49265_99999 51120_49899_endc_49313_49354_99999 INPDB RPT Cadherin--Cadherin-- 52518_52922_ A_93 B_461 E_88 12_7_5 642 A_239 B_1128 E_328 --A_105 B_497 E_111 -- 51230_endn_52518_63380_53323_47240_54862 52518_53323_endc_53850_99999 INPDB CPL Thiamin diphosphate-binding fold (THDP-binding)--TK C-terminal domain-like-- 52374_47323_ A_75 B_399 E_143 14_7_7 617 A_247 B_1540 E_642 --A_100 B_688 E_246 -- 57770_50677_53383_endn_47616_55190_99999 47323_50249_69065_46589_endc_47240_99999 INPDB CPL Nucleotidylyl transferase--Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases-- 53223_51735_ A_56 B_439 E_106 13_9_4 601 A_61 B_487 E_172 --A_993 B_8798 E_3827 -- 51569_55021_endn_47446_74653_47175_48600_57802_99999 52540_55136_endc_99999 INPDB CPL Aminoacid dehydrogenase-like, N-terminal domain--NAD(P)-binding Rossmann-fold domains-- 52283_51735_ A_52 B_368 E_160 14_7_7 580 A_53 B_465 E_206 --A_993 B_8798 E_3827 -- 53383_endn_52283_52768_51735_56214_99999 51206_55021_52283_51905_51735_endc_99999 INPDB CPL Formate/glycerate dehydrogenase catalytic domain-like--NAD(P)-binding Rossmann-fold domains-- 53187_55031_ A_37 B_456 E_86 11_8_3 579 A_105 B_1042 E_648 --A_39 B_462 E_92 -- endn_50978_56784_49447_53822_50729_51338_99999 51126_endc_99999 INPDB CPL Zn-dependent exopeptidases--Bacterial exopeptidase dimerisation domain-- 57716_48508_ E_576 11_6_5 576 A_72 B_426 E_2067 --A_1 B_10 E_1172 -- endn_57716_49899_48508_82199_99999 81321_57716_48508_endc_99999 NOTPDB CPL Glucocorticoid receptor-like (DNA-binding domain)--Nuclear receptor ligand-binding domain-- 57716_57716_ E_565 23_11_12 565 A_72 B_426 E_2067 --A_72 B_426 E_2067 -- endn_57586_50156_48695_54862_57196_57716_47576_57903_99999_57850 57586_48508_50156_48695_endc_55003_55753_50203_57716_99999_46689_57850 INPDB RPT Glucocorticoid receptor-like (DNA-binding domain)--Glucocorticoid receptor-like (DNA-binding domain)-- 51905_55424_ A_52 B_376 E_121 11_7_4 549 A_358 B_2910 E_1243 --A_55 B_393 E_136 -- 52467_endn_52833_51905_50022_51971_99999 52540_endc_52821_99999 INPDB CPL FAD/NAD(P)-binding domain--FAD/NAD-linked reductases, dimerisation (C-terminal) domain-- 63380_52343_ A_28 B_342 E_175 19_11_8 545 A_34 B_499 E_327 --A_34 B_384 E_315 -- 50475_54580_53448_52218_endn_46458_54292_55856_49764_50692_99999 48726_46548_54292_55920_53041_51905_endc_99999 INPDB CPL Riboflavin synthase domain-like--Ferredoxin reductase-like, C-terminal NADP-linked domain-- 51338_51556_ A_64 B_407 E_61 13_7_6 532 A_82 B_584 E_154 --A_183 B_1070 E_385 -- 52499_51278_endn_51338_54593_69304_99999 51556_48557_51338_47869_endc_99999 INPDB CPL Composite domain of metallo-dependent hydrolases--Metallo-dependent hydrolases-- 47413_53822_ B_522 E_8 5_2_3 530 A_123 B_1973 E_199 --A_49 B_1285 E_794 -- endn_99999 51604_53613_endc INPDB CPL lambda repressor-like DNA-binding domains--Periplasmic binding protein-like I-- 81653_81665_ A_32 B_298 E_196 8_3_5 526 A_48 B_376 E_513 --A_43 B_361 E_378 -- endn_52172_99999 81660_56784_endc_99999_50814 INPDB CPL Calcium ATPase, transduction domain A--Calcium ATPase, transmembrane domain M-- 53623_53244_ A_10 B_492 E_17 15_8_7 519 A_21 B_536 E_49 --A_16 B_527 E_43 -- 63418_51569_endn_52440_56059_51984_51735_99999 51569_51419_52440_endc_51735_53623_99999 INPDB CPL MurD-like peptide ligases, catalytic domain--MurD-like peptide ligases, peptide-binding domain-- 47823_56349_ A_24 B_481 E_4 16_11_5 509 A_29 B_507 E_8 --A_59 B_801 E_85 -- 54556_52540_endn_56235_46458_48345_49899_54171_46785_47823_99999 74942_56349_69754_endc_99999 INPDB CPL lambda integrase-like, N-terminal domain--DNA breaking-rejoining enzymes-- 50447_54980_ A_17 B_357 E_129 9_4_5 503 A_102 B_772 E_432 --A_28 B_403 E_157 -- 52540_endn_51011_99999 52540_54211_54980_endc_99999 INPDB CPL Translation proteins--EF-G/eEF-2 domains III and V-- 55785_55785_ A_92 B_336 E_70 32_18_14 498 A_168 B_1284 E_394 --A_168 B_1284 E_394 -- endn_47473_47459_55594_46579_55781_52172_55785_46966_53335_52374_51735_64501_54631_81606_49879_53850_99999 52540_48452_48283_endc_47384_55073_49758_47661_49785_55781_56507_55785_99999_55874 NOTPDB RPT PYP-like sensor domain (PAS domain)--PYP-like sensor domain (PAS domain)-- 53795_50331_ A_46 B_444 E_5 6_2_4 495 A_421 B_3843 E_485 --A_61 B_521 E_45 -- endn_99999 52540_50331_endc_99999 INPDB CPL PEP carboxykinase-like--MOP-like-- 48452_48452_ A_15 B_86 E_385 26_15_11 486 A_146 B_1937 E_3442 --A_146 B_1937 E_3442 -- 52540_81901_47220_endn_50978_46565_48113_48452_48439_51004_53383_53448_82657_55008_99999 52540_47954_53756_46565_48452_endc_47240_48439_51658_52833_99999 NOTPDB RPT TPR-like--TPR-like-- 55785_47384_ A_26 B_440 E_17 14_11_3 483 A_168 B_1284 E_394 --A_45 B_1750 E_74 -- 46966_endn_56849_46579_55781_53474_52172_48317_99999_53850_55785 endc_99999_55874 NOTPDB CPL PYP-like sensor domain (PAS domain)--Homodimeric domain of signal transducing histidine kinase-- 48726_49265_ E_482 14_8_6 482 A_14 B_78 E_4071 --A_23 B_135 E_1734 -- 57196_52047_endn_52058_48726_57184_49265_99999 53383_48726_endc_49265_56112_99999 INPDB CPL Immunoglobulin--Fibronectin type III-- 51905_54373_ A_8 B_235 E_235 18_10_8 478 A_358 B_2910 E_1243 --A_16 B_381 E_311 -- 53335_endn_51735_47473_51905_53474_56425_51971_53850_99999 53335_51905_51735_endc_51430_52833_99999_51971 INPDB CPL FAD/NAD(P)-binding domain--FAD-linked reductases, C-terminal domain-- 56059_51246_ A_31 B_348 E_93 13_3_10 472 A_192 B_1104 E_490 --A_31 B_372 E_107 -- 51230_endn_52440 51230_50729_51332_51735_endc_55154_51261_55326_52255_99999 INPDB CPL Glutathione synthetase ATP-binding domain-like--Rudiment single hybrid motif-- 50677_52374_ A_53 B_296 E_121 6_2_4 470 A_53 B_299 E_143 --A_247 B_1540 E_642 -- endn_99999 47323_48557_endc_99999 INPDB CPL ValRS/IleRS/LeuRS editing domain--Nucleotidylyl transferase-- 81660_56784_ A_10 B_67 E_388 8_5_3 465 A_16 B_89 E_466 --A_230 B_1745 E_1267 -- endn_81660_81653_99999_81665 endc_81665_99999 INPDB CPL Calcium ATPase, ATP-binding domain N--HAD-like-- 55120_55120_ A_29 B_318 E_116 14_7_7 463 A_48 B_598 E_185 --A_48 B_598 E_185 -- endn_46579_55174_53474_56672_81624_99999 54928_51366_52799_53927_50044_endc_99999 INPDB RPT Pseudouridine synthase--Pseudouridine synthase-- 52518_52518_ A_2 B_366 E_93 7_3_4 461 A_239 B_1128 E_328 --A_239 B_1128 E_328 -- 52467_endn_99999 52922_52777_endc_99999 INPDB RPT Thiamin diphosphate-binding fold (THDP-binding)--Thiamin diphosphate-binding fold (THDP-binding)-- 50156_50156_ A_4 B_122 E_300 14_9_5 426 A_28 B_534 E_1380 --A_28 B_534 E_1380 -- 51045_endn_52833_47769_50729_50494_50156_46785_99999 52096_50044_50156_endc_99999 INPDB RPT PDZ domain-like--PDZ domain-like-- 51445_51011_ A_8 B_286 E_130 12_4_8 424 A_89 B_1646 E_1474 --A_17 B_377 E_212 -- 54556_endn_81296_99999 49452_56655_49785_81296_endc_50370_56112_99999 INPDB CPL (Trans)glycosidases--alpha-Amylases, C-terminal beta-sheet domain-- 55874_52172_ A_3 B_391 E_20 19_8_11 414 A_178 B_2970 E_398 --A_85 B_3166 E_241 -- endn_55781_52172_56601_47384_50998_55785_99999 63411_46894_48283_47384_endc_55073_47226_52172_46689_55874_99999 NOTPDB CPL ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase--CheY-like-- 54826_51604_ A_44 B_282 E_84 6_3_3 410 A_47 B_318 E_109 --A_64 B_382 E_137 -- 51569_endn_99999 53474_endc_99999 INPDB CPL Enolase N-terminal domain-like--Enolase C-terminal domain-like-- 53098_56672_ A_22 B_104 E_281 19_13_6 407 A_290 B_2494 E_2335 --A_66 B_378 E_3164 -- 54160_endn_57756_48452_49611_50022_53098_47807_50630_56672_53807_47781_99999 56672_48403_69131_endc_53098_99999 INPDB CPL Ribonuclease H-like--DNA/RNA polymerases-- 55681_52954_ A_51 B_254 E_101 12_8_4 406 A_205 B_1250 E_450 --A_75 B_353 E_158 -- 81271_endn_48557_47060_55186_55826_56112_99999 52833_64586_endc_99999 INPDB CPL Class II aaRS and biotin synthetases--Anticodon-binding domain of Class II aaRS-- 52518_52467_ A_43 B_293 E_58 10_5_5 394 A_239 B_1128 E_328 --A_132 B_640 E_265 -- 52047_endn_99999_53850_57802 52518_endc_51679_99999_53850 INPDB CPL Thiamin diphosphate-binding fold (THDP-binding)--DHS-like NAD/FAD-binding domain-- 52467_52518_ A_40 B_288 E_61 8_3_5 389 A_132 B_640 E_265 --A_239 B_1128 E_328 -- endn_52518_99999 63393_52518_51735_endc_99999 INPDB CPL DHS-like NAD/FAD-binding domain--Thiamin diphosphate-binding fold (THDP-binding)-- 49562_49562_ E_380 8_3_5 380 B_12 E_1627 --B_12 E_1627 -- endn_49562_99999 49562_53300_endc_48350_99999 INPDB RPT C2 domain (Calcium/lipid-binding domain, CaLB)--C2 domain (Calcium/lipid-binding domain, CaLB)-- 47923_47923_ E_380 10_3_7 380 A_1 B_2 E_469 --A_1 B_2 E_469 -- endn_56112_99999 50978_49842_50729_47473_endc_52821_99999 INPDB RPT Ypt/Rab-GAP domain of gyp1p--Ypt/Rab-GAP domain of gyp1p-- 46785_54909_ A_73 B_298 E_9 6_3_3 380 A_1241 B_7979 E_2143 --A_113 B_586 E_39 -- endn_54909_99999 endc_46785_99999 INPDB CPL "Winged helix" DNA-binding domain--Dimeric alpha+beta barrel-- 50615_52540_ A_20 B_289 E_69 8_3_5 378 A_38 B_324 E_95 --A_2129 B_14320 E_12913 -- endn_47917_99999 52540_53795_47917_endc_99999 INPDB CPL N-terminal domain of alpha and beta subunits of F1 ATP synthase--P-loop containing nucleotide triphosphate hydrolases-- 54849_52029_ A_37 B_129 E_210 6_3_3 376 A_39 B_132 E_217 --A_38 B_142 E_269 -- endn_99999_48592 endc_52029_99999 INPDB CPL GroEL-intermediate domain like--GroEL apical domain-like-- 52490_55307_ A_23 B_94 E_258 8_5_3 375 A_37 B_111 E_301 --A_28 B_99 E_286 -- 81321_endn_55307_52490_99999 endc_52490_99999 INPDB CPL Tubulin, GTPase domain--Tubulin, C-terminal domain-- 47954_47954_ A_32 E_343 11_7_4 375 A_52 B_42 E_726 --A_52 B_42 E_726 -- 81383_endn_57903_56672_57783_56112_99999 52540_51735_endc_99999 INPDB RPT Cyclin-like--Cyclin-like-- 50249_50249_ A_34 B_155 E_184 16_11_5 373 A_390 B_2734 E_1438 --A_390 B_2734 E_1438 -- 52540_50249_endn_81878_57903_57938_46785_54814_57802_47661_99999 50249_64182_endc_46785_99999 INPDB RPT Nucleic acid-binding proteins--Nucleic acid-binding proteins-- 50447_50465_ A_31 B_186 E_153 7_3_4 370 A_102 B_772 E_432 --A_47 B_206 E_195 -- 52540_endn_99999 52540_53383_endc_99999 INPDB CPL Translation proteins--EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain-- 50249_55681_ A_28 B_250 E_91 6_3_3 369 A_390 B_2734 E_1438 --A_205 B_1250 E_450 -- 50249_endn_99999 55261_endc_99999 INPDB CPL Nucleic acid-binding proteins--Class II aaRS and biotin synthetases-- 55174_55120_ B_336 E_31 8_4_4 367 A_41 B_733 E_129 --A_48 B_598 E_185 -- 52540_endn_50729_99999 51658_55120_endc_99999 INPDB CPL Alpha-L RNA-binding motif--Pseudouridine synthase-- 81383_52047_ B_2 E_362 20_7_13 364 B_8 E_2068 --A_9 B_93 E_2576 -- 81383_endn_52058_56672_52317_48452_99999 57095_48371_endc_55681_52047_51569_55200_75471_52058_52075_63965_99999_46609 INPDB CPL F-box domain--RNI-like-- 54211_55060_ A_79 B_217 E_64 8_4_4 360 A_200 B_1096 E_669 --A_83 B_250 E_130 -- endn_54631_55347_99999 55811_51161_endc_99999 INPDB CPL Ribosomal protein S5 domain 2-like--GHMP Kinase-- 55326_56042_ A_90 B_226 E_42 9_5_4 358 A_92 B_231 E_44 --A_93 B_263 E_63 -- 51246_endn_56042_47060_99999 55326_53328_endc_99999 INPDB CPL Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain--Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain-- 52540_47917_ A_36 B_227 E_95 11_7_4 358 A_2129 B_14320 E_12913 --A_49 B_235 E_120 -- 51230_51294_endn_50615_55608_51261_99999 51230_50615_endc_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--C-terminal domain of alpha and beta subunits of F1 ATP synthase-- 53738_53738_ A_35 B_249 E_73 9_6_3 357 A_38 B_288 E_93 --A_38 B_288 E_93 -- 54637_53738_endn_81799_51161_99999 53738_endc_99999 INPDB RPT Phosphoglucomutase, first 3 domains--Phosphoglucomutase, first 3 domains-- 82895_82895_ E_353 25_15_10 353 E_618 --E_618 -- 57424_endn_50494_57362_57283_49854_55486_82895_57196_53822_48726_57492_49482_99999_57567 57424_54511_53300_endc_55486_82895_57196_57501_57567_99999 INPDB RPT TSP-1 type 1 repeat--TSP-1 type 1 repeat-- 57535_57535_ E_344 22_15_7 344 B_3 E_582 --B_3 E_582 -- 57059_57424_56436_endn_57256_57184_53300_49854_50104_82895_57535_57196_57302_48726_99999 57196_53822_50494_53300_endc_99999_57535 INPDB RPT Complement control module/SCR domain--Complement control module/SCR domain-- 53067_56778_ A_9 B_142 E_193 8_4_4 344 A_176 B_1667 E_1029 --A_14 B_148 E_238 -- 53067_53383_endn_99999 51126_53300_endc_99999 NOTPDB CPL Actin-like ATPase domain--Heat shock protein 70kD (HSP70), C-terminal substrate-binding fragment-- 53738_55957_ A_32 B_244 E_67 7_5_2 343 A_38 B_288 E_93 --A_32 B_251 E_80 -- 52242_53738_endn_99999_55931 endc_99999 INPDB CPL Phosphoglucomutase, first 3 domains--Phosphoglucomutase, C-terminal domain-- 48065_50729_ E_339 18_8_10 339 A_3 B_7 E_597 --A_14 B_44 E_3057 -- 47113_46966_endn_50494_47576_50729_50044_99999 48726_57903_50729_50044_49562_endc_46785_57889_48366_99999 INPDB CPL DBL homology domain (DH-domain)--PH domain-like-- 56176_55103_ A_28 B_229 E_80 8_3_5 337 A_43 B_454 E_248 --A_31 B_249 E_105 -- endn_52343_99999 52540_46548_endc_99999_54862 INPDB CPL FAD-binding domain--FAD-linked oxidases, C-terminal domain-- 82714_82866_ B_318 E_9 9_5_4 327 B_354 E_19 --A_45 B_639 E_196 -- endn_47648_82714_82693_99999 56954_47852_endc_99999 INPDB CPL Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains--Multidrug efflux transporter AcrB transmembrane domain-- 55874_54211_ A_9 B_241 E_75 11_3_8 325 A_178 B_2970 E_398 --A_200 B_1096 E_669 -- endn_82199_99999 55205_51294_53383_56719_endc_51679_53850_99999 INPDB CPL ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase--Ribosomal protein S5 domain 2-like-- 81665_56784_ A_25 B_245 E_51 8_3_5 321 A_43 B_361 E_378 --A_230 B_1745 E_1267 -- endn_81653_99999 53383_55008_endc_81665_99999 NOTPDB CPL Calcium ATPase, transmembrane domain M--HAD-like-- 51419_50621_ A_11 B_253 E_56 9_6_3 320 A_13 B_426 E_106 --A_14 B_268 E_63 -- 50249_endn_51735_53244_50621_99999 endc_50621_99999 INPDB CPL PLP-binding barrel--Alanine racemase-like, C-terminal domain-- 51735_51735_ A_21 B_222 E_69 26_15_11 312 A_993 B_8798 E_3827 --A_993 B_8798 E_3827 -- 69765_50129_endn_53328_52283_81324_51905_51735_48179_53623_52440_47336_48600_99999_52507 52283_51735_endc_48179_56796_53098_53474_47336_56327_51971_99999 NOTPDB RPT NAD(P)-binding Rossmann-fold domains--NAD(P)-binding Rossmann-fold domains-- 56672_53098_ A_2 B_1 E_303 25_15_10 306 A_66 B_378 E_3164 --A_290 B_2494 E_2335 -- 54001_47220_endn_57756_54236_47027_53098_50630_56219_56672_47353_46785_81730_46689_99999 54654_47473_endc_57938_53098_52047_51569_46919_56672_99999 INPDB CPL DNA/RNA polymerases--Ribonuclease H-like-- 63411_63411_ A_2 B_183 E_116 9_5_4 301 A_9 B_281 E_224 --A_9 B_281 E_224 -- 63411_endn_49749_53098_99999 63411_50729_endc_99999 INPDB RPT LuxS/MPP-like metallohydrolase--LuxS/MPP-like metallohydrolase-- 52540_48019_ A_21 B_207 E_73 10_7_3 301 A_2129 B_14320 E_12913 --A_24 B_335 E_97 -- 50685_52540_47413_51294_endn_55608_99999 52540_endc_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--DNA polymerase III clamp loader subunits, C-terminal domain-- 57424_57424_ E_295 33_18_15 295 E_497 --E_497 -- 57424_endn_63825_57184_47473_57283_63829_57625_57196_48726_56487_50911_57567_63501_57667_49854_57501_99999 56436_81321_57424_50494_57184_47473_endc_49854_57535_82895_57196_56487_99999_57414_50911 INPDB RPT LDL receptor-like module--LDL receptor-like module-- 55550_56112_ E_294 7_4_3 294 A_4 B_15 E_910 --A_114 B_971 E_9319 -- endn_50044_55550_99999 endc_99999_56112 INPDB CPL SH2 domain--Protein kinase-like (PK-like)-- 52833_52833_ A_11 B_44 E_237 12_4_8 292 A_220 B_2517 E_2068 --A_220 B_2517 E_2068 -- endn_52833_46565_99999 47616_52833_48371_47933_51905_endc_57889_99999 INPDB RPT Thioredoxin-like--Thioredoxin-like-- 51735_56327_ A_14 B_164 E_110 7_5_2 288 A_993 B_8798 E_3827 --A_21 B_204 E_156 -- endn_54495_51735_57802_99999 endc_99999 INPDB CPL NAD(P)-binding Rossmann-fold domains--Lactate & malate dehydrogenases, C-terminal domain-- 51905_56425_ A_20 B_217 E_48 8_5_3 285 A_358 B_2910 E_1243 --A_22 B_246 E_72 -- 52218_52266_endn_48695_99999 46977_51735_99999 INPDB CPL FAD/NAD(P)-binding domain--Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain-- 46785_55781_ B_277 E_8 9_3_6 285 A_1241 B_7979 E_2143 --A_54 B_1030 E_131 -- endn_55781_99999 55781_53822_endc_46785_99999_69118 INPDB CPL "Winged helix" DNA-binding domain--GAF domain-like-- 57184_57196_ E_282 29_18_11 282 B_4 E_859 --A_2 B_7 E_2358 -- 56436_57424_endn_49899_57095_57184_53300_63829_57196_69322_48726_57581_47686_54511_49854_82895_82153_99999 82153_57196_48726_63825_49899_57184_57581_endc_63829_57535_99999 NOTPDB CPL Growth factor receptor domain--EGF/Laminin-- 81296_81296_ B_48 E_233 15_10_5 281 A_40 B_404 E_1207 --A_40 B_404 E_1207 -- endn_81296_57701_49417_49265_47576_49384_50974_99999_56935 81296_49384_endc_51445_99999 INPDB RPT E set domains--E set domains-- 63737_55486_ A_11 B_82 E_188 13_4_9 281 A_11 B_85 E_209 --A_64 B_735 E_1617 -- 53335_endn_52425_99999 49590_48371_49611_endc_56322_54616_53474_55961_99999 INPDB CPL Leukotriene A4 hydrolase N-terminal domain--Metalloproteases ("zincins"), catalytic domain-- 47031_50729_ E_281 10_4_6 281 B_13 E_440 --A_14 B_44 E_3057 -- endn_50729_54236_99999 50729_50156_48065_endc_57850_99999 INPDB CPL Second domain of FERM--PH domain-like-- 51206_46785_ B_267 E_9 8_4_4 276 A_2 B_447 E_467 --A_1241 B_7979 E_2143 -- endn_48452_55785_99999 51206_53448_endc_99999 INPDB CPL cAMP-binding domain-like--"Winged helix" DNA-binding domain-- 46966_46966_ E_269 13_7_6 269 A_7 B_30 E_584 --A_7 B_30 E_584 -- 52087_endn_46966_50729_47576_47473_99999 51045_46966_56487_47473_endc_99999 INPDB RPT Spectrin repeat--Spectrin repeat-- 47364_52540_ A_32 B_193 E_42 8_4_4 267 A_35 B_206 E_59 --A_2129 B_14320 E_12913 -- endn_48452_47473_99999 52540_47446_endc_99999 INPDB CPL Domain of the SRP/SRP receptor G-proteins--P-loop containing nucleotide triphosphate hydrolases-- 49899_49899_ B_9 E_257 20_13_7 266 A_22 B_208 E_1314 --A_22 B_208 E_1314 -- 52540_55957_endn_49899_53613_57184_57196_53383_49785_53822_56496_49313_99999 57196_49899_63446_52440_56496_endc_99999 INPDB RPT Concanavalin A-like lectins/glucanases--Concanavalin A-like lectins/glucanases-- 54791_54791_ A_3 E_262 12_7_5 265 A_38 B_130 E_562 --A_38 B_130 E_562 -- 54928_54791_endn_52833_48508_54814_99999 56281_54791_endc_54814_99999 INPDB RPT Eukaryotic type KH-domain (eKH-domain)--Eukaryotic type KH-domain (eKH-domain)-- 53335_53335_ A_21 B_107 E_136 13_7_6 264 A_733 B_3918 E_2070 --A_733 B_3918 E_2070 -- 48013_53335_endn_57467_75604_46785_99999 50249_53335_52777_51905_endc_99999 NOTPDB RPT S-adenosyl-L-methionine-dependent methyltransferases--S-adenosyl-L-methionine-dependent methyltransferases-- 50494_50156_ A_6 B_206 E_51 14_9_5 263 A_19 B_482 E_1600 --A_28 B_534 E_1380 -- endn_52518_50494_47240_55486_57467_52440_55961_99999 50494_56988_50156_endc_99999 INPDB CPL Trypsin-like serine proteases--PDZ domain-like-- 53706_50692_ A_31 B_228 E_2 9_5_4 261 A_63 B_328 E_38 --A_113 B_397 E_88 -- endn_46548_54292_54862_99999 63380_endc_54862_99999 INPDB CPL Formate dehydrogenase/DMSO reductase, domains 1-3--ADC-like-- 54980_54211_ A_17 B_145 E_98 6_3_3 260 A_28 B_403 E_157 --A_200 B_1096 E_669 -- 52540_endn_50447 54980_endc_99999 INPDB CPL EF-G/eEF-2 domains III and V--Ribosomal protein S5 domain 2-like-- 54768_54211_ A_17 B_96 E_144 5_2_3 257 A_18 B_198 E_397 --A_200 B_1096 E_669 -- endn_99999 49785_endc_99999 INPDB CPL dsRNA-binding domain-like--Ribosomal protein S5 domain 2-like-- 54236_47031_ E_255 8_4_4 255 A_18 B_81 E_1815 --B_13 E_440 -- endn_54236_50156_99999 50729_50156_endc_99999 INPDB CPL Ubiquitin-like--Second domain of FERM-- 52777_52777_ B_139 E_113 13_7_6 252 A_10 B_418 E_328 --A_10 B_418 E_328 -- 53335_endn_56801_52777_47005_47336_99999 56801_52777_47336_endc_55729_99999 INPDB RPT CoA-dependent acyltransferases--CoA-dependent acyltransferases-- 46938_52087_ E_252 14_5_9 252 A_1 B_1 E_260 --B_5 E_404 -- 52087_52096_endn_55729_99999 49842_48452_endc_49749_49354_52799_48726_46938_99999 INPDB CPL N-terminal domain of phosphatidylinositol transfer protein sec14p--C-terminal domain of phosphatidylinositol transfer protein sec14p-- 46785_52512_ B_249 E_3 7_4_3 252 A_1241 B_7979 E_2143 --A_33 B_474 E_94 -- 51569_endn_46689_51261 53738_endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Phosphosugar isomerase-- 49599_54695_ E_248 13_8_5 248 A_1 E_685 --B_6 E_2078 -- endn_55797_47473_47162_56219_54695_49599_99999 49599_54695_endc_47781_99999 NOTPDB CPL TRAF domain-like--POZ domain-- 56436_56436_ B_1 E_244 14_9_5 245 A_2 B_62 E_1409 --A_2 B_62 E_1409 -- 57440_endn_56436_53300_49854_49265_48726_51695_99999 57196_56436_endc_49854_99999 INPDB RPT C-type lectin-like--C-type lectin-like-- 52540_52317_ A_42 B_169 E_34 6_3_3 245 A_2129 B_14320 E_12913 --A_204 B_1244 E_262 -- 53383_endn_99999 52540_endc_99999 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Class I glutamine amidotransferase-like-- 50331_50331_ A_22 B_218 E_5 8_5_3 245 A_61 B_521 E_45 --A_61 B_521 E_45 -- 52540_endn_53795_46785_99999 endc_51695_99999 INPDB RPT MOP-like--MOP-like-- 46589_55681_ A_13 B_193 E_39 4_2_2 245 A_16 B_318 E_97 --A_205 B_1250 E_450 -- endn_99999 endc_99999 INPDB CPL tRNA-binding arm--Class II aaRS and biotin synthetases-- 53671_53671_ A_32 B_185 E_27 9_5_4 244 A_36 B_212 E_71 --A_36 B_212 E_71 -- 47413_53383_endn_52335_99999 51556_endc_54893_99999 INPDB RPT Aspartate/ornithine carbamoyltransferase--Aspartate/ornithine carbamoyltransferase-- 54211_54980_ A_15 B_145 E_83 5_3_2 243 A_200 B_1096 E_669 --A_28 B_403 E_157 -- endn_54980_99999 endc_99999 INPDB CPL Ribosomal protein S5 domain 2-like--EF-G/eEF-2 domains III and V-- 52540_46785_ A_80 B_130 E_29 14_6_8 239 A_2129 B_14320 E_12913 --A_1241 B_7979 E_2143 -- 52540_53901_endn_52172_99999_55785 51366_52540_48452_52980_endc_48439_47781_99999 INPDB CPL P-loop containing nucleotide triphosphate hydrolases--"Winged helix" DNA-binding domain-- 50044_50044_ B_19 E_216 12_7_5 235 A_2 B_84 E_1671 --A_2 B_84 E_1671 -- 64268_endn_49464_50044_55550_57850_99999 50044_endc_55550_49265_99999 NOTPDB RPT SH3-domain--SH3-domain-- 54211_55666_ A_29 B_152 E_53 11_5_6 234 A_200 B_1096 E_669 --A_29 B_159 E_70 -- 54791_55666_endn_46915_99999 50249_54211_52972_endc_46915_99999 INPDB CPL Ribosomal protein S5 domain 2-like--Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domains 2 and 5-- 54368_55931_ A_24 B_156 E_52 7_3_4 232 A_24 B_160 E_53 --A_25 B_190 E_126 -- endn_51556_99999 53738_53756_endc_99999 INPDB CPL Glutamine synthetase, N-terminal domain--Glutamine synthase/guanido kinase-- 47005_52777_ A_5 B_180 E_44 6_4_2 229 A_6 B_185 E_52 --A_10 B_418 E_328 -- 51230_endn_47005_99999 52777_endc NOTPDB CPL Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex--CoA-dependent acyltransferases-- 81923_52540_ B_206 E_22 6_2_4 228 A_1 B_223 E_50 --A_2129 B_14320 E_12913 -- endn_99999 52540_56954_endc_99999 INPDB CPL Double Clp-N motif--P-loop containing nucleotide triphosphate hydrolases-- 50182_82689_ A_32 B_191 E_4 7_3_4 227 A_84 B_323 E_404 --A_35 B_209 E_8 -- endn_82861_99999 51206_53474_endc_99999 INPDB CPL Sm-like ribonucleoproteins--Mechanosensitive channel protein MscS (YggB), C-terminal domain-- 50044_55550_ E_226 11_6_5 226 A_2 B_84 E_1671 --A_4 B_15 E_910 -- endn_50729_50044_57889_55550_99999 50729_50044_endc_99999_56112 INPDB CPL SH3-domain--SH2 domain-- 49493_49493_ A_3 B_74 E_146 6_4_2 223 A_8 B_140 E_172 --A_8 B_140 E_172 -- endn_46565_57938_99999 endc_99999 INPDB RPT HSP40/DnaJ peptide-binding domain--HSP40/DnaJ peptide-binding domain-- 82861_50182_ A_37 B_178 E_7 9_5_4 222 A_40 B_181 E_12 --A_84 B_323 E_404 -- 47986_endn_47473_48019_99999 82689_55307_endc_99999 INPDB CPL Mechanosensitive channel protein MscS (YggB), transmembrane region--Sm-like ribonucleoproteins-- 52172_52540_ B_218 E_3 11_4_7 221 A_85 B_3166 E_241 --A_2129 B_14320 E_12913 -- 46934_endn_46689_99999 52540_46894_endc_48283_46785_99999_46689 NOTPDB CPL CheY-like--P-loop containing nucleotide triphosphate hydrolases-- 49503_49503_ A_6 B_74 E_141 10_3_7 221 A_81 B_368 E_450 --A_81 B_368 E_450 -- endn_49503_99999 46626_49785_49503_69179_endc_50998_99999 INPDB RPT Cupredoxins--Cupredoxins-- 48334_52540_ A_7 B_129 E_84 7_3_4 220 A_8 B_135 E_96 --A_2129 B_14320 E_12913 -- endn_53150_99999 52540_endc_50104_99999 INPDB CPL DNA repair protein MutS, domain III--P-loop containing nucleotide triphosphate hydrolases-- 52058_52058_ B_1 E_216 16_9_7 217 A_6 B_143 E_2568 --A_6 B_143 E_2568 -- 52047_52540_51110_endn_52058_48056_52075_53098_99999 52047_81321_48726_52058_endc_56112_99999 NOTPDB RPT L domain-like--L domain-like-- 57850_57845_ E_216 10_6_4 216 A_19 B_52 E_3605 --E_367 -- endn_57756_48371_57850_49265_99999 46966_endc_47240_99999 NOTPDB CPL RING finger domain, C3HC4--B-box zinc-binding domain-- 51984_53623_ A_8 B_203 E_3 7_2_5 214 A_9 B_210 E_6 --A_21 B_536 E_49 -- endn_99999 56553_51735_endc_99999_53244 INPDB CPL MurCD N-terminal domain--MurD-like peptide ligases, catalytic domain-- 51735_52210_ A_44 B_132 E_38 9_5_4 214 A_993 B_8798 E_3827 --A_60 B_218 E_78 -- 52210_endn_56059_99999_55729 52210_48256_endc_99999 INPDB CPL NAD(P)-binding Rossmann-fold domains--Succinyl-CoA synthetase domains-- 47895_52540_ E_212 4_3_1 212 A_1 B_5 E_218 --A_2129 B_14320 E_12913 -- endn_47895_99999 endc INPDB CPL Transducin (alpha subunit), insertion domain--P-loop containing nucleotide triphosphate hydrolases-- 56091_50249_ A_20 B_140 E_50 8_5_3 210 A_34 B_180 E_92 --A_390 B_2734 E_1438 -- 52799_endn_56091_99999_55729 endc_47781_99999 INPDB CPL DNA ligase/mRNA capping enzyme, catalytic domain--Nucleic acid-binding proteins-- 52151_55048_ B_178 E_32 5_4_1 210 B_266 E_103 --B_179 E_32 -- 53901_endn_99999_53850 99999 INPDB CPL FabD/lysophospholipase-like--Probable ACP-binding domain of malonyl-CoA ACP transacylase-- 51215_46689_ B_205 E_5 6_4_2 210 A_1 B_240 E_12 --A_246 B_4125 E_4002 -- endn_48329_49785_99999 endc_46689 NOTPDB CPL Regulatory protein AraC--Homeodomain-like-- 81324_51206_ B_3 E_205 9_5_4 208 A_34 B_130 E_1059 --A_2 B_447 E_467 -- endn_48256_81324_55347_99999 48403_49367_endc_99999 NOTPDB CPL Voltage-gated potassium channels--cAMP-binding domain-like-- 81324_81324_ E_207 12_7_5 207 A_34 B_130 E_1059 --A_34 B_130 E_1059 -- 63411_75445_endn_63600_55008_46689_99999 51206_endc_47473_49265_99999 NOTPDB RPT Voltage-gated potassium channels--Voltage-gated potassium channels-- 57196_57184_ E_205 22_11_11 205 A_2 B_7 E_2358 --B_4 E_859 -- 47686_endn_63825_49899_57095_57184_82895_57196_48726_57581_99999 50969_49899_63825_57184_endc_57283_63829_57196_57581_99999_56112 NOTPDB CPL EGF/Laminin--Growth factor receptor domain-- 51905_51735_ A_20 B_135 E_50 13_6_7 205 A_358 B_2910 E_1243 --A_993 B_8798 E_3827 -- 51230_endn_51395_51735_52507_99999 52283_47576_51419_51735_endc_48179_99999 NOTPDB CPL FAD/NAD(P)-binding domain--NAD(P)-binding Rossmann-fold domains-- 47576_47576_ E_204 10_5_5 204 B_8 E_704 --B_8 E_704 -- endn_47576_50729_47473_99999 46966_81296_47576_endc_99999 INPDB RPT Calponin-homology domain, CH-domain--Calponin-homology domain, CH-domain-- 50630_56672_ E_203 15_8_7 203 A_15 B_69 E_1046 --A_66 B_378 E_3164 -- 46966_endn_57756_47027_57774_50630_51283_99999 81296_56219_46919_56672_endc_53098_99999 NOTPDB CPL Acid proteases--DNA/RNA polymerases-- 52540_46689_ A_2 B_196 E_4 15_8_7 202 A_2129 B_14320 E_12913 --A_246 B_4125 E_4002 -- 51366_51391_endn_51735_55781_52172_55785_99999 52540_46894_endc_55785_99999_46689_53098 NOTPDB CPL P-loop containing nucleotide triphosphate hydrolases--Homeodomain-like-- 53092_55920_ A_19 B_140 E_42 7_5_2 201 A_22 B_159 E_79 --A_50 B_337 E_200 -- endn_53092_54826_51430_99999 endc_99999 INPDB CPL Creatinase/prolidase N-terminal domain--Creatinase/aminopeptidase-- 47095_47095_ E_201 9_6_3 201 A_2 B_16 E_689 --A_2 B_16 E_689 -- 50203_endn_55418_63763_99999_46689 endc_47095_99999 NOTPDB RPT HMG-box--HMG-box-- 55315_75217_ B_182 E_18 4_2_2 200 A_69 B_239 E_475 --A_43 B_424 E_72 -- endn_99999 endc_99999 INPDB CPL L30e-like--alpha/beta knot-- 53041_47807_ A_17 B_123 E_60 9_4_5 200 A_60 B_294 E_160 --A_34 B_131 E_87 -- 54427_endn_52343_99999 54160_56672_endc_53098_99999 INPDB CPL Resolvase-like--5' to 3' exonuclease, C-terminal subdomain-- 48329_46894_ B_196 E_3 11_4_7 199 A_9 B_1007 E_45 --A_87 B_1032 E_48 -- endn_48329_55486_56935 54427_48452_54593_endc_51261_48439_99999 NOTPDB CPL RNA polymerase sigma subunit--C-terminal effector domain of the bipartite response regulators-- 46626_46626_ B_188 E_11 14_7_7 199 A_40 B_894 E_220 --A_40 B_894 E_220 -- 46626_endn_49503_56003_46785_47741_99999 81496_46626_52799_48695_endc_75420_99999 INPDB RPT Cytochrome c--Cytochrome c-- 54980_54980_ B_182 E_16 6_3_3 198 A_28 B_403 E_157 --A_28 B_403 E_157 -- 52540_endn_50447 52540_endc_99999 NOTPDB RPT EF-G/eEF-2 domains III and V--EF-G/eEF-2 domains III and V-- 52009_51621_ A_23 B_171 E_4 6_4_2 198 A_27 B_221 E_13 --A_75 B_609 E_182 -- endn_56059_47831_99999 55804_endc INPDB CPL Phosphohistidine domain--Phosphoenolpyruvate/pyruvate domain-- 51556_51338_ A_18 B_111 E_66 8_5_3 195 A_183 B_1070 E_385 --A_82 B_584 E_154 -- endn_52096_51338_53671_99999 endc_53187_99999 INPDB CPL Metallo-dependent hydrolases--Composite domain of metallo-dependent hydrolases-- 50249_47781_ B_194 E_1 8_2_6 195 A_390 B_2734 E_1438 --A_49 B_595 E_68 -- endn_56091 52113_46934_46929_endc_47781_99999 INPDB CPL Nucleic acid-binding proteins--RuvA domain 2-like-- 47473_47473_ B_8 E_186 12_7_5 194 A_51 B_190 E_2808 --A_51 B_190 E_2808 -- 46966_51045_endn_50729_47473_47661_99999 48695_47473_endc_51695_99999 INPDB RPT EF-hand--EF-hand-- 50800_51621_ A_13 B_116 E_63 5_3_2 192 A_21 B_142 E_93 --A_75 B_609 E_182 -- endn_53187_99999 endc_52935 INPDB CPL PK beta-barrel domain-like--Phosphoenolpyruvate/pyruvate domain-- 56219_56672_ E_189 9_4_5 189 A_14 B_311 E_899 --A_66 B_378 E_3164 -- 46966_endn_56672_99999 56672_endc_51261_53098_99999 NOTPDB CPL DNase I-like--DNA/RNA polymerases-- 54747_46906_ A_16 B_101 E_70 4_2_2 187 A_16 B_102 E_73 --A_18 B_103 E_73 -- endn_99999 endc_99999 INPDB CPL Ribosomal protein L11, N-terminal domain--Ribosomal protein L11, C-terminal domain-- 56784_81665_ A_10 B_45 E_131 6_4_2 186 A_230 B_1745 E_1267 --A_43 B_361 E_378 -- endn_81660_99999_81665 endc_99999 INPDB CPL HAD-like--Calcium ATPase, transmembrane domain M-- 51230_47005_ A_6 B_142 E_35 8_3_5 183 A_35 B_1330 E_195 --A_6 B_185 E_52 -- 51230_endn_99999 53474_52777_47005_endc_99999 NOTPDB CPL Single hybrid motif--Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex-- 51621_52935_ A_13 B_108 E_61 5_2_3 182 A_75 B_609 E_182 --A_19 B_116 E_66 -- 50800_endn 52009_endc_99999 INPDB CPL Phosphoenolpyruvate/pyruvate domain--Pyruvate kinase, C-terminal domain-- 56053_56053_ A_17 B_98 E_65 4_2_2 180 A_18 B_101 E_77 --A_18 B_101 E_77 -- endn_99999 53137_endc INPDB RPT Ribosomal protein L6--Ribosomal protein L6-- 56024_56024_ A_1 B_119 E_60 8_6_2 180 A_32 B_314 E_180 --A_32 B_314 E_180 -- endn_50729_49611_57850_99999_49879 endc_99999 INPDB RPT Phospholipase D/nuclease--Phospholipase D/nuclease-- 56519_56601_ B_175 E_4 6_3_3 179 B_229 E_7 --A_15 B_1220 E_127 -- 54427_endn_99999 54184_endc_99999 INPDB CPL Penicillin binding protein dimerisation domain--beta-Lactamase/D-ala carboxypeptidase-- 81665_81660_ A_4 B_46 E_127 7_3_4 177 A_43 B_361 E_378 --A_16 B_89 E_466 -- endn_81653_99999 56784_endc_47240_99999 INPDB CPL Calcium ATPase, transmembrane domain M--Calcium ATPase, ATP-binding domain N-- 54593_54593_ A_7 B_127 E_42 10_7_3 176 A_36 B_950 E_142 --A_36 B_950 E_142 -- 51658_endn_56534_54236_52374_54593_99999 54593_endc_99999 INPDB RPT Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase--Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase-- 51971_54373_ A_7 B_127 E_42 9_5_4 176 A_47 B_404 E_155 --A_16 B_381 E_311 -- 53335_51197_endn_54373_99999 51735_51905_endc_99999 INPDB CPL Nucleotide-binding domain--FAD-linked reductases, C-terminal domain-- 49854_49854_ E_176 23_11_12 176 B_1 E_636 --B_1 E_636 -- 56436_57424_endn_50494_49854_57535_55486_57196_82671_56487_99999 50242_57440_57424_50494_endc_49854_57535_82895_57196_49785_56487_99999 NOTPDB RPT Spermadhesin, CUB domain--Spermadhesin, CUB domain-- 48179_52413_ A_21 B_131 E_24 5_2_3 176 A_71 B_674 E_226 --A_23 B_134 E_35 -- endn_51735 51735_endc_99999 INPDB CPL 6-phosphogluconate dehydrogenase C-terminal domain-like--UDP-glucose dehydrogenase (UDPGDH), C-terminal (UDP-binding) domain-- 47648_52418_ A_24 B_139 E_11 7_4_3 174 A_24 B_152 E_15 --A_27 B_155 E_18 -- endn_52317_50692_99999 54680_endc_99999 INPDB CPL Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain--Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain-- 50729_50729_ E_171 15_8_7 171 A_14 B_44 E_3057 --A_14 B_44 E_3057 -- 51045_endn_50729_50156_57863_48065_47031_99999 50729_50156_57863_47473_49562_endc_99999 INPDB RPT PH domain-like--PH domain-like-- 50104_50249_ A_17 B_109 E_43 7_4_3 169 A_89 B_444 E_354 --A_390 B_2734 E_1438 -- endn_50978_63380_99999 56784_endc_99999 INPDB CPL Translation proteins SH3-like domain--Nucleic acid-binding proteins-- 50249_52540_ A_1 B_141 E_24 14_7_7 166 A_390 B_2734 E_1438 --A_2129 B_14320 E_12913 -- 50249_endn_69008_52833_48024_68912_99999 54160_52540_51294_54189_endc_53850_99999 INPDB CPL Nucleic acid-binding proteins--P-loop containing nucleotide triphosphate hydrolases-- 46609_54719_ A_12 B_119 E_35 6_3_3 166 A_12 B_131 E_41 --A_12 B_120 E_42 -- endn_46609_99999 endc_52821_99999 INPDB CPL Fe,Mn superoxide dismutase (SOD), N-terminal domain--Fe,Mn superoxide dismutase (SOD), C-terminal domain-- 54665_56003_ A_21 B_87 E_56 11_6_5 164 A_21 B_98 E_68 --A_22 B_115 E_81 -- 56176_55447_53901_endn_47741_99999 46626_56176_54292_endc_99999 INPDB CPL CO dehydrogenase molybdoprotein N-domain-like--Molybdemum cofactor-binding domain-- 81301_81891_ B_135 E_26 5_3_2 161 A_169 B_325 E_254 --A_3 B_185 E_32 -- endn_54631_99999 endc_99999 INPDB CPL Nucleotidyltransferase--tRNA CCA-adding enzyme, C-terminal domains-- 55979_55979_ A_21 B_103 E_37 8_4_4 161 A_31 B_141 E_99 --A_31 B_141 E_99 -- endn_46955_99999_55979 endc_51445_99999_55979 INPDB RPT DNA clamp--DNA clamp-- 56553_55257_ A_16 B_99 E_45 5_2_3 160 A_17 B_105 E_51 --A_36 B_108 E_92 -- endn_99999 endc_47789_99999 INPDB CPL Insert subdomain of RNA polymerase alpha subunit--RBP11-like subunits of RNA polymerase-- 81296_51445_ A_6 B_133 E_20 7_4_3 159 A_40 B_404 E_1207 --A_89 B_1646 E_1474 -- 51690_endn_81296_99999 endc_51011_99999 INPDB CPL E set domains--(Trans)glycosidases-- 54292_47741_ A_8 B_95 E_56 11_4_7 159 A_44 B_565 E_187 --A_8 B_97 E_63 -- 55447_endn_56003_99999 46626_56176_54665_55961_53218_endc_99999 INPDB CPL 2Fe-2S ferredoxin-like--CO dehydrogenase ISP C-domain like-- 63418_53623_ B_155 E_2 8_5_3 157 B_167 E_6 --A_21 B_536 E_49 -- endn_56784_56601_69125_99999 endc_99999_53244 INPDB CPL MurE/MurF N-terminal domain--MurD-like peptide ligases, catalytic domain-- 49265_48726_ E_157 9_4_5 157 A_23 B_135 E_1734 --A_14 B_78 E_4071 -- endn_48726_99999_49265 57196_48726_endc_99999_49265 NOTPDB CPL Fibronectin type III--Immunoglobulin-- 55729_55729_ A_8 B_98 E_49 11_7_4 155 A_217 B_2438 E_800 --A_217 B_2438 E_800 -- 53383_endn_46966_52317_54593_55729_99999 53474_endc_55729_99999 INPDB RPT Acyl-CoA N-acyltransferases (Nat)--Acyl-CoA N-acyltransferases (Nat)-- 50249_50104_ A_17 B_97 E_41 5_3_2 155 A_390 B_2734 E_1438 --A_89 B_444 E_354 -- 63451_endn_99999 endc_99999 INPDB CPL Nucleic acid-binding proteins--Translation proteins SH3-like domain-- 81324_53850_ B_3 E_151 5_2_3 154 A_34 B_130 E_1059 --A_257 B_5627 E_740 -- endn_99999 endc_53850_99999 NOTPDB CPL Voltage-gated potassium channels--Periplasmic binding protein-like II-- 53448_51161_ A_18 B_99 E_37 7_4_3 154 A_346 B_1868 E_1125 --A_81 B_714 E_168 -- endn_51735_46785_99999 53738_endc_99999 INPDB CPL Nucleotide-diphospho-sugar transferases--Trimeric LpxA-like enzymes-- 51045_51045_ E_154 10_4_6 154 B_5 E_413 --B_5 E_413 -- 52540_51045_endn_99999 51045_56204_50156_endc_51735_99999 INPDB RPT WW domain--WW domain-- 54211_56719_ A_6 B_121 E_26 4_2_2 153 A_200 B_1096 E_669 --A_12 B_354 E_44 -- 99999_55874 endc_99999 NOTPDB CPL Ribosomal protein S5 domain 2-like--Type II DNA topoisomerase-- 52374_48163_ A_14 B_124 E_15 4_2_2 153 A_247 B_1540 E_642 --A_20 B_133 E_29 -- endn_99999 endc_99999 INPDB CPL Nucleotidylyl transferase--An anticodon-binding domain of class I aminoacyl-tRNA synthetases-- 46785_46785_ A_30 B_83 E_40 15_7_8 153 A_1241 B_7979 E_2143 --A_1241 B_7979 E_2143 -- 46626_endn_50729_47943_46785_55469_99999 52540_55681_50156_63520_endc_46785_53850_99999 INPDB RPT "Winged helix" DNA-binding domain--"Winged helix" DNA-binding domain-- 63882_53218_ A_35 B_91 E_25 9_4_5 151 A_38 B_93 E_30 --A_63 B_253 E_54 -- 52540_endn_53218_99999 52540_endc_63867_53850_99999 INPDB CPL Molybdenum cofactor biosynthesis protein MoeA, N-terminal and linker domains--Molybdenum cofactor biosynthesis proteins-- 55973_55973_ B_93 E_58 5_3_2 151 A_2 B_100 E_69 --A_2 B_100 E_69 -- endn_55973_99999 55973_endc INPDB RPT S-adenosylmethionine synthetase--S-adenosylmethionine synthetase-- 56300_55816_ A_5 B_118 E_27 11_3_8 150 A_170 B_837 E_750 --A_5 B_129 E_30 -- endn_55816_99999 50969_51126_56300_55816_endc_50998_51120_99999 INPDB CPL Metallo-dependent phosphatases--5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain-- 53681_53681_ A_10 B_132 E_5 7_3_4 147 A_14 B_167 E_17 --A_14 B_167 E_17 -- 63992_endn_99999 53067_82771_endc_99999 INPDB RPT Aspartate/glutamate racemase--Aspartate/glutamate racemase-- 53328_50486_ B_120 E_27 9_3_6 147 A_12 B_276 E_59 --A_2 B_165 E_46 -- 56420_endn_99999 52096_51735_47336_endc_53720_99999 INPDB CPL Formyltransferase--FMT C-terminal domain-like-- 52821_52821_ A_19 B_95 E_32 9_4_5 146 A_39 B_452 E_298 --A_39 B_452 E_298 -- 56281_endn_52821_99999 52799_endc_52821_55729_99999 INPDB RPT Rhodanese/Cell cycle control phosphatase--Rhodanese/Cell cycle control phosphatase-- 46785_53098_ A_1 B_137 E_8 6_4_2 146 A_1241 B_7979 E_2143 --A_290 B_2494 E_2335 -- endn_48726_46689_99999 endc_99999 NOTPDB CPL "Winged helix" DNA-binding domain--Ribonuclease H-like-- 56235_52402_ A_17 B_88 E_40 3_1_2 145 A_157 B_611 E_596 --A_350 B_1402 E_436 -- endn endc_99999 INPDB CPL N-terminal nucleophile aminohydrolases (Ntn hydrolases)--Adenine nucleotide alpha hydrolases-like-- 52172_46894_ B_142 E_3 8_5_3 145 A_85 B_3166 E_241 --A_87 B_1032 E_48 -- endn_52172_52821_55874_99999 48452_endc_99999 NOTPDB CPL CheY-like--C-terminal effector domain of the bipartite response regulators-- 52096_52096_ A_8 B_115 E_22 11_6_5 145 A_96 B_1208 E_331 --A_96 B_1208 E_331 -- 52210_52096_endn_54665_51679_99999 52096_51604_endc_55729_99999 NOTPDB RPT ClpP/crotonase--ClpP/crotonase--