BLASTP 2.2.16 [Mar-25-2007] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference: Schäffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. RID: 43S3B52K014 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 4,902,867 sequences; 1,692,710,850 total letters Results of PSI-Blast iteration 5 Query= hypothetical protein CPR_1533 [Clostridium perfringens SM101] Length=153 E-value BETTER than threshold Score E Sequences producing significant alignments: (Bits) Value gi|83589752|ref|YP_429761.1| hypothetical protein Moth_0901 [... 132 8e-30 gi|114567907|ref|YP_755061.1| signal transduction histidine k... 125 7e-28 gi|110802949|ref|YP_698850.1| hypothetical protein CPR_1533 [... 113 3e-24 gi|83590459|ref|YP_430468.1| hypothetical protein Moth_1623 [... 111 9e-24 gi|18310544|ref|NP_562478.1| hypothetical protein CPE1562 [Cl... 110 3e-23 gi|110801047|ref|YP_696248.1| hypothetical protein CPF_1814 [... 104 2e-21 gi|89897160|ref|YP_520647.1| hypothetical protein DSY4414 [De... 100 3e-20 gi|98662187|dbj|GAA00738.1| unnamed protein product [Pelotomacul 98.5 9e-20 gi|109648798|ref|ZP_01372697.1| hypothetical protein Dhaf_089... 98.1 1e-19 gi|98662193|dbj|GAA00744.1| unnamed protein product [Pelotoma... 97.0 3e-19 gi|76797388|ref|ZP_00779711.1| conserved hypothetical protein... 94.3 2e-18 gi|106893075|ref|ZP_01360201.1| hypothetical protein ClosDRAF... 92.7 5e-18 gi|20807061|ref|NP_622232.1| hypothetical protein TTE0560 [Th... 92.3 7e-18 gi|146274208|dbj|BAF59957.1| hypothetical membrane protein [P... 91.2 2e-17 gi|77686801|ref|ZP_00802123.1| hypothetical protein AmetDRAFT... 91.2 2e-17 gi|77685841|ref|ZP_00801223.1| hypothetical protein AmetDRAFT... 86.6 3e-16 gi|109645618|ref|ZP_01369538.1| hypothetical protein Dhaf_344... 81.9 1e-14 gi|89895276|ref|YP_518763.1| hypothetical protein DSY2530 [De... 77.7 2e-13 gi|82748713|ref|ZP_00911192.1| conserved hypothetical protein... 75.8 7e-13 Sequences with E-value WORSE than threshold gi|70949494|ref|XP_744152.1| hypothetical protein PC000266.02... 38.8 0.10 gi|89210534|ref|ZP_01188922.1| hypothetical protein HoreDRAFT... 36.5 0.43 gi|118726218|ref|ZP_01574847.1| signal transduction histidine... 36.5 0.44 gi|125974879|ref|YP_001038789.1| hypothetical protein Cthe_23... 35.7 0.66 gi|83282476|ref|XP_729787.1| hypothetical protein PY01947 [Pl... 34.9 1.2 gi|82746042|ref|ZP_00908551.1| similar to sensor histidine ki... 34.2 2.3 gi|51473241|ref|YP_066998.1| VirB6-like protein of the type I... 33.8 3.0 gi|91206076|ref|YP_538431.1| VirB6 [Rickettsia bellii RML369-... 33.0 4.2 gi|126651694|ref|ZP_01723897.1| hypothetical protein BB14905_... 33.0 4.9 gi|124898817|gb|EAY70660.1| Cation transport ATPase [Burkholderi 33.0 5.4 gi|6782407|emb|CAB70618.1| membrane protein [Streptococcus th... 32.6 6.0 gi|47567134|ref|ZP_00237850.1| accessory gene regulator prote... 32.6 6.0 gi|84359643|ref|ZP_00984376.1| COG0474: Cation transport ATPase 32.2 7.7 gi|58585050|ref|YP_198623.1| Type IV secretory pathway, VirB6... 32.2 8.8 gi|124511686|ref|XP_001348976.1| hypothetical protein PF07_00... 32.2 9.1 ALIGNMENTS Query 1 MLKVTFLELLVRGIPEAFLMVLAA------YCFAN----KKVNR--KNY--VLSSLIIAL 46 83589752 1 MDFMPWTALVFQSIPEEIIQVALG------LGLIG----RYPRM--RFI--TAIGIGGGV 46 114567907 1 MYSVPWYAIVLIAVPQTILIIKIG------FGLFN----LQVHA--RQC--LLATLIVSV 46 110802949 1 MLKVTFLELLVRGIPEAFLMVLAA------YCFAN----KKVNR--KNY--VLSSLIIAL 46 83590459 1 MDKMPLINLVLQSFPESVLLLLFG------TSLFK----CQPDR--FRL--LAGAAISAL 46 18310544 17 MLKVTLFETLVRGIPEALTMMLAM------YAFAN----KKLEK--KEY--LISSLILVL 62 110801047 1 MLKVTLFETLVRGIPEALTMMLAM------YAFAN----KKLEK--KEY--LISSLILVL 46 89897160 3 VIDMPILALLLQGIPEEIGVITLA------YAIAR----IPFRW--KEI--IPMGIIFAL 48 98662187 35 FLLQGIPEMMGILAFS------LAFAG----VPLRW--GVI--AAVGTVLAV 72 109648798 1 MLFQGIPEEIGIVTLA------YAIAG----IPFRW--KEL--IPMGTLLAL 38 98662193 1 MIEKELLSLLLQDFPESITFTIAA------FALLS----LKYDY--KKI--LFISLLQ-T 45 76797388 1 MDRLTIWEVFLFSVPEAAVIISIA------FGLAG----VKFQP--KKI--LYMSVLTGI 46 106893075 1 MEQMPINVVIFGSIPEAALIISLG------LILVG----IRPPF--IKV--ALIAIIQGV 46 20807061 1 MDRLTLWEVFIFSVPEALVIISIA------LGLAG----VKFDT--VKG--TAMSLSLGL 46 146274208 7 FLLQGIPEMMGILAFS------LAFAG----VPLRW--GVI--AAVGTVLAV 44 77686801 1 METMPLNAILLGLIPEALLLIYLG------LILIG----VRPDM--KKL--IFAAIVQGI 46 77685841 1 MLKLPIISLFLRTIPEGIILVLVG------YMILN----KPLEK--QKI--CITGVILGI 46 109645618 4 MEIMPLLIVLFASIPEEFLITVLG------LKLFG----VKIRPLIGKI--VVIAILQAA 51 89895276 6 IEIMPLLIVLFASIPEEFLITVLG------LKLFG----VKIRPLIGKI--VVIAILQAA 53 82748713 1 MFRFTCVDFFFRLIPESFILIWGI------HIFSR----KTIDM--FKY--ILSSLILAI 46 70949494 14 FS----KKKNW--ARINFTFLVFVLGI 34 89210534 12 SITENYILSIFI------LSILD----KKISF--KRL--TLMSIGVSI 45 118726218 8 LLLLTVIEGFIFIMAF------YFLSGQRKFIKNNY--IRI--ACFVSIYTI 49 125974879 1 MENMSLLQFILVSFSEQVIFIFLGTLSIGKYHYFK----IHSNY--YRI--LSTASLVTV 52 126651694 65 FIFGLIPSSVVFTLFL------LDSFS----LNKHY--ILL--CTIAII--- 99 6782407 271 FIFTR----VFYVI--FKI--V-EAFVLAV 291 47567134 2 EMLAIGLSI------HILHE----NRLNI--KFT--LSMVLVTQI 32 124511686 24 LFN----KQRDW--PRI--TFTFLVFVL 43 Query 47 -------------------VVYLVRFLPISYG--VHTILNV-------FVLIF--LIFNI 76 83589752 47 -------------------FSFFFRRLPYDFG--VHTLAQL-------IVLIL--LLHFI 76 114567907 47 -------------------VTYFLRKLPLMFG--IHTIILV-------ILLTI--LLVIL 76 110802949 47 -------------------VVYLVRFLPISYG--VHTILNV-------FVLIF--LIFNI 76 83590459 47 -------------------CSDLIRRLPFPYG--IHALVGV-------IVLTL--IFKFL 76 18310544 63 -------------------VVYLIRLLPINYG--IHTILNI-------FVLIF--LAFNV 92 110801047 47 -------------------VVYLIRLLPINYG--IHTILNI-------FVLIF--LAFNV 76 89897160 49 -------------------IVSFIRAQNLPFG--THTIVLI-------FALFI--FITLK 78 98662187 73 -------------------IIYIIRSLPLAFG--LHTAAAL-------LLVTI--IIAKT 102 109648798 39 -------------------TAYFLRLCNLPFG--THTIVLV-------VLVFL--FLTLR 68 98662193 46 -------------------FTNLIRLLPIAFG--MHTIILL-------ITLTV--YIRIF 75 76797388 47 -------------------ILYFIRPLVSSYI--VNVILYI-------GVLMI--LFLVF 76 106893075 47 -------------------ASYYIRK-HVGFG--LHVILQA-------ATMSL--LVWRI 75 20807061 47 -------------------ILYFIRPLVTSYI--VNVIIYV-------ILLVT--LFLLF 76 146274208 45 -------------------IIYIIRSLPLAFG--LHTAAAL-------LLVTI--IIAKT 74 77686801 47 -------------------LVYYIRR-HTMFG--IHLLLQY-------VTLIL--LIWAV 75 77685841 47 -------------------STYFVRMLPINFG--IHMILIL-------FVYMF--LLHKI 76 109645618 52 -------------------ISFSVRLLPLPFG--IHTILQI-------PLFAL--PLYLL 81 89895276 54 -------------------ISFSVRLLPLPFG--IHTILQI-------PLFAL--PLYLL 83 82748713 47 -------------------SCLIIRCLPIYYG--VNTDICI-------MLTII--IVMFI 76 70949494 35 -------------------KTLFCILLFLYYQ--L--------------VLFF--IFFIS 57 89210534 46 -------------------FVLSIRTLPVTPV--MNIFVAM-------SAQIL--LVRYL 75 118726218 50 -------------------YTYWITKF-LPSG--LHSILIA-------SLTCF--ILNYI 78 125974879 53 -------------------ISYILREKLGLVS--EAPLLVL-------FADII--LMIFI 82 83282476 27 FLVFVLG--IKTLFCILLFLYHQIVLFF--IFFIS 57 82746042 57 LF-------FITMM--ILLFL 68 51473241 397 IYIILYL-------IALYF--IFFLI 413 91206076 393 PLGF---IYIILYL-------IALYF--IFLLI 413 126651694 100 -------------------ALYFKKELIVFFG--ILTNIS-----------FI--ILYLV 125 124898817 857 TLVV--HLLRT 865 6782407 292 -------------------PIILIQLLN------VVAQILV-------LTMIL--LFPVV 317 47567134 33 -------------------IGYFIYS---KMG--ILGVFFI-------ILFIL--ISLVI 59 84359643 810 TLVV--HLLRT 818 58585050 452 ILMV-------PAIFIGIVLYFL 467 124511686 44 GIKTVLCILLYMYNNILLFVVFLILCVVSFYGLIVNTIKSL-------VLYIL--ILSLV 94 Query 77 NKIDL-------IASIRASILILMILFICEGLN-IWI----------V-QYVLH-EN--- 113 83589752 77 VRVDY-------FEATMAAFLGVLAVGIVEGIS-IPT----------V-SYLTG-IS--- 113 114567907 77 QRIDF-------WRSLVAVLLGVMILGVIENSY-LPL----------L-LQFTS-RN--- 113 110802949 77 NKIDL-------IASIRASILILMILFICEGLN-IWI----------V-QYVLH-EN--- 113 83590459 77 LAMSF-------YQGFVASLTTLATLGAIEILL-LPL----------E-TSILGLER--- 114 18310544 93 NKIDL-------IVSIKASILILMILFLCEGLN-LLF----------I-EKFFN-EN--- 129 110801047 77 NKIDL-------IVSIKASILILMILFLCEGLN-LLF----------I-EKFFN-EN--- 113 89897160 79 GKKDV-------SIALVASILSFLAIIVFEVIC-ISL----------L-TSIFK-TP--- 115 98662187 103 TCVPP-------SKSFISVFASFSILVTLELII-HEF----------F-FFLTK-QD--- 139 109648798 69 SKKDV-------SVSLFASLVSYMFLIVFEFIS-INL----------F-IVVLN-IP--- 105 98662193 76 TKAKL-------SKILTSTVLLFVIMAAMQAIY-AKP----------L-LNLTN-LS--- 112 76797388 77 KVMDF-------FKGMMSVILAVSIYLIIEYLN-VTA----------I-QFLFD-ID--- 113 106893075 76 MGVSI-------KLSTLSIIIGVVISSLIETPL-IAI----------I-PRLMG-IS--- 112 20807061 77 KMMDL-------FRSIMSVTLAVSIYLIIEYLN-VNA----------M-QFLFD-LD--- 113 146274208 75 TCVPP-------SKSFISVFASFSILVTLELII-HEF----------F-FFLTK-QD--- 111 77686801 76 LKVHI-------LGAVLSASIGGGINILIRGPM-LLL----------I-QSITG-LS--- 112 77685841 77 NIMNF-------YKAVTAGIVSFIFIAISEWIM-LVF----------Y-IGVLG-MS--- 113 109645618 82 LGLPY-------LYSLVVILISATLYTILDASI-IPF----------L-LYWTG-IP--- 118 89895276 84 LGLPY-------LYSLVVILISATLYTILDASI-IPL----------L-LYWTG-IP--- 120 82748713 77 IDIPL-------IKNVIGTFLLYFMLSLSETIN-MLL----------L-SGL-N-ID--- 112 70949494 58 TAISL-------YALVVNTFTSLLLYIVVLFSI-LSS----------IGLSFFG-IADID 98 89210534 76 YGIPI-------LLGGIAAGLTDTIYMTLETIL-IPL----------L-GFIFN-VE--- 112 118726218 79 LNGTL-------LKSFVKVLIIFLGIAIIESLI-GLA----------C-TTIIG-KP--- 115 125974879 83 MRFNF-------YEAITSSVLGFSLIMLVEIPF-SVI----------I-TLLLG-IN--- 119 83282476 58 TTISL-------YALVINTFTSLILYIVVLFSI-LSSIGLSSLGIVHI-DYIFN-IF--- 104 82746042 69 QNKKI-------IQNFISIMLSIIIFIVSDTIQ-GAI----------F-IELFN-QD--- 105 51473241 414 FKATI-------IYLTALITIGMMI------IM-GPI----------F-ICFML-FN--- 444 91206076 414 FKATI-------IY-LTALITIGMIIT-----M-API----------F-ICFML-FN--- 444 126651694 126 NSSSL-------LGPFDDIIVFVTLLAIMNGVI-IAF----------Y-L 156 124898817 866 QKIPF-------LQSTASLPVLLSTVAAIAIGCWLPF----------S-PFADA-LG--- 903 6782407 318 LLMSFVPRMQELVFGVLKVMFGGLIFPAITTLL-TLL----------I-FYIEK-M---- 360 47567134 60 KTRSI-------FLSIIIPVISFILLVISEYVA-QLI----------N-FYFLK-KT--- 96 84359643 819 QKIPF-------LQSTASLPVLLSTVAAIAIGCWLPF----------S-PFADA-LG--- 856 58585050 468 LCLYA-------YIIFLSGFVGIAFLIA---IM-PLF----------L-ISILF-SP--- 501 124511686 95 ---------------LTSISLSFYNIIYIEYIS-KVF----------------------- 115 Query 114 -LNDLFKNSLDK--VIFG--IPSTII-FATIV----------ILYY--LIASKKGKLR 153 83589752 114 -FETALHDPWLR--VLFP--IPDEII-LGAAA----------YL 141 114567907 114 -VMDLAEQPWFN--IAAF--LPGFLI-GLL-------------LYA--FIRHRK 146 110802949 114 -LNDLFKNSLDK--VIFG--IPSTII-FATIV----------ILYY--LIASKKGKLR 153 83590459 115 -FSEAWPRPSLR--IFMA--VPELAI-LALIT----------YRIY 144 18310544 130 -IDYLFENVFTK--TILG--IPSTIM-FMVIV----------TYYY--LIASKKGKLR 169 110801047 114 -IDYLFENVFTK--TILG--IPSTIM-FMVIV----------TYYY--LIASKKGKLR 153 89897160 116 -NEEIFMDPVKR--VLFT--EPQVI----LLF----------LTAF--IIRRKR 148 98662187 140 -PQAVISNYLLW--KLIG--LPQAFL-MIILA----------LLIA 169 109648798 106 -VEAMFDDSIGR--ILFT--EPQVI----LLF----------ITAF--LIRRKR 138 98662193 113 -YEDVASSPVLR--GLFC--LPYELV-FLGIA----------IFLN--IHKKK 147 76797388 114 -PVILLKDYVLR--FVCF--LPQLLT-AILIS----------FAI 142 106893075 113 -LMEIMTRDWIR--VLIF--LPQLLI-MATLI----------Y 139 20807061 114 -PTVLLQNYALR--FACF--LPQLAV-AILFS----------ILI 142 146274208 112 -PQAVISNYLLW--KLIG--LPQAFL-MIILA----------LLIA 141 77686801 113 -LGDILYRPWLR--IFSF--YPRFII-LSIII----------YL 140 77685841 114 -TEKVLDQSLSS--I 125 109645618 119 -LEAVLTNTTLR--LLFF--IPQFMI-MLLLV----------IIVS--LKRIK 153 89895276 121 -LETVLTNTTLR--LLFF--IPQFTV-MLLLV----------IIVS--LKKIK 155 82748713 113 -TDISVLQPITR--FIYG 127 70949494 99 YVSNIFYDGFIS--SLFCSLLPLFVLELFSSI----------IYIC--IKKRKKG 139 89210534 113 -LNMAMNTPLIR--IKF 126 118726218 116 -MSVLIHNNEVL--LVLG--IIAKLI-QSTIV----------FILY 145 125974879 120 -GAEELYQNAVN--FAIF--VLSTRL-LQIVL----------AFLF 149 83282476 105 -YDDF----IFS--LFYS--LVPLFV-LELFS----------SIIYTCIKKRKKG 139 82746042 106 -VNKLLDNNIIV--ILMH--ISLFFI-ALIFS----------SFVA--YILKK 140 51473241 445 -ITRSLFENWLRQLISYA--LQPIIL-FAGIA----------FISM--IIR 479 91206076 445 -ITRSLFENWLRQLISYA--IQPIIL-FVGIA----------FIGM--IIK 479 124898817 904 -FMHLPGSYWLW--LVAT--MVGYIA-LAQIV----------KTIY--VRRYKR 939 6782407 361 -IENIVTNGFDG--VLKT--LPSLLL-FGLVFKLLVSVVSKGVIYF--LIWRFKGQL 409 47567134 97 -VVMMKSNSMDL--ILLG--LEIFVI-LLLLT----------VAV 125 84359643 857 -FMHLPGSYWLW--LVAT--MVGYIA-LAQIV----------KTIY--VRRYKR 892 58585050 502 -LKSLFEG-WIKFCISFC--LQSIII-FTLLS----------LLAA--II 534 124511686 116 --EHAFLSTVLY--STFP--L---LV-MELFV----------SIAY 141 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: May 8, 2007 6:00 PM Number of letters in database: 1,692,710,850 Number of sequences in database: 4,902,867 Lambda K H 0.335 0.150 0.431 Gapped Lambda K H 0.267 0.0576 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 4902867 Number of Hits to DB: 35645428 Number of extensions: 2034243 Number of successful extensions: 19850 Number of sequences better than 10: 607 Number of HSP's better than 10 without gapping: 0 Number of HSP's gapped: 19472 Number of HSP's successfully gapped: 653 Length of query: 153 Length of database: 1692710850 Length adjustment: 116 Effective length of query: 37 Effective length of database: 1123978278 Effective search space: 41587196286 Effective search space used: 41587196286 T: 11 A: 40 X1: 15 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 39 (19.1 bits) S2: 73 (32.2 bits)