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Her refereed papers are:


Smith, B.O., Ito, Y.,Raine, A., Teichmann, S., Ben-Tovim, L., Nietlispach, D., Broadhurst, W., Terada, T., Kelly, M., Oschkinat, H., Shibata, T., Yokoyama, S. and Laue, E.D. (1996) An approach to global fold determination using limited NMR data from larger proteins selectively protonated at specific residue types. J.Biomol. NMR, 8, 360-368.


Park, J., Teichmann, S.A., Hubbard, T. and Chothia, C. (1997) Intermediate Sequences Increase the Detection of Homology between Sequences. J. Mol. Biol., 273, 349-354. PDFPS


Park, J. and Teichmann, S.A. (1998) DIVCLUS: an automatic method in the GEANFAMMER package that finds homologous domains in single- and multi-domain proteins. Bioinformatics,14,144-150. PDFPS
Suppl Info

Bateman, A., Murzin, A. and Teichmann, S.A. (1998) Structure and Distribution of Pentapeptide Repeats in Bacteria. Protein Science, 7, 1477-1480.

Teichmann, S.A., Park, J. and Chothia, C. (1998) Structural assignments to the Mycoplasma genitalium proteins show extensive gene duplications and domain rearrangements. Proc. Natl. Acad. Sci. USA, 95, 14658-14663. PSPDF


Teichmann, S.A. and Mitchison, G. (1999) Is there a phylogenetic signal in prokaryote proteins? J. Mol. Evol., 49, 98-107. PDFPS
Suppl Info


Teichmann, S.A., Chothia, C., Church, G.M. and Park, J. (2000) Fast Assignment of Protein Structures to Sequences using the Intermediate Sequence Library PDB-ISL. Bioinformatics, 16, 117-124. PDFPS
Suppl Info

Teichmann, S.A. and Chothia, C. (2000) Immunoglobulin Superfamily Proteins in Caenorhabditis elegans. J. Mol. Biol., 296, 1371-1387. PDFPS Suppl Info


Park, J., Lappe, M. and Teichmann, S.A. (2001) Mapping Protein Family Interactions: Intramolecular and Intermolecular Protein Family Interaction Repertoires in the PDB and Yeast. J. Mol. Biol., 307, 929-939. PDFPS
Suppl Info

Qian, J., Stenger, B., Wilson, C.A., Lin, J., Jansen, R., Teichmann, S.A., Park, J., Krebs, W., Yu, H., Alexandrov, B., Echols, N. & Gerstein, M. (2001)  PartsList: a web-based system for dynamically ranking protein folds based on disparate attributes, including whole-genome expression and interaction information. Nucleic Acids Res., 29, 1750-1764. PDF Suppl Info

Apic, G., Gough, J. & Teichmann, S.A. (2001) An Insight into Domain Combinations. Bioinformatics, 17, S83-89. PDF

Apic, G., Gough, J.  & Teichmann S.A. (2001) Domain Combinations in Archaeal, Eubacterial and Eukaryotic Proteomes. J. Mol. Biol., 310, 311-325. PDF Suppl Info

Teichmann, S.A., Rison, S.C.G., Thornton, J.M., Riley, M., Gough, J. & Chothia, C. (2001) The Evolution and Structural Anatomy of the Small Molecule Metabolic Pathways in Escherichia coli. J. Mol. Biol., 311, 693-708. PDF Suppl Info

Teichmann, S.A., Rison, S.C.G., Thornton, J.M., Riley, M., Gough, J. & Chothia, C. (2001) Small Molecule Metabolism: An Enzyme Mosaic. Trends Biotechnol., 19, 482-486. PDF


Rison, S.C.G., Teichmann, S.A. & Thornton, J.M. (2002) Homology, Pathway distance and Chromosomal localisation of the Small Molecule Metabolism enzymes in Escherichia coli. J. Mol. Biol., 318, 911-932. PDFSuppl Info Journal cover illustration

Jardine, O., Gough, J., Chothia, C. & Teichmann, S.A. (2002) Comparison of the Small Molecule Metabolism Enzymes of Escherichia coli and Saccharomyces cerevisiae. Genome Res., 12, 916-929. PDFSuppl Info

Teichmann, S.A. (2002) The Constraints Protein-Protein Interactions Place on Sequence Divergence. J. Mol. Biol., 324, 399-407. PDFSuppl Info


Babu, M.M. & Teichmann, S.A. (2003) Functional Determinants of Transcription Factors in Escherichia coli: Protein Families and Binding Sites. Trends Genetics, 19, 75-79. PDFSuppl Info

Babu, M.M. & Teichmann, S.A. (2003) Evolution of Transcription Factors and the Gene Regulatory Network in Escherichia coli. Nucleic Acids Res., 31, 1234-1244. PDFSuppl Info

Apic, G., Huber, W. & Teichmann, S.A. (2003) Multi-domain Protein Families and Domain Pairs: Comparison with known Structures and a Random Model of Domain Recombination. J. Struc. Func. Genomics, 4, 67-78. PDF

Bankier, A.T., Spriggs, H.F., Fartmann, B., Konfortov, B.A., Madera, M., Vogel, C., Teichmann, S.A., Ivens, A. & Dear, P.H. (2003) Integrated Mapping, Chromosomal Sequencing and Sequence Analysis of Cryptosporidium parvum. Genome Res., 13, 1787-1799. PDF

Vogel, C., Teichmann, S.A. & Chothia, C. (2003) The Immunoglobulin superfamily in Drosophila melanogaster and Caenorhabditis elegans and the Evolution of Complexity. Development, 130, 6317-6328. PDFSuppl Info


Vogel, C., Berzuini, C., Bashton, M., Gough, J. & Teichmann, S.A. (2004) Supra-domains - evolutionary units larger than single protein domains. J. Mol. Biol., 336, 809-823. Suppl Info  PDF

Teichmann, S.A. & Babu, M.M. (2004) Gene regulatory network growth by duplication. Nature Genet., 36, 492-496. PDFSuppl info

Teichmann, S.A. & Veitia, R.A. (2004) Genes encoding subunits of stable complexes are clustered on the yeast chromosomes. Genetics,167, 2121-2125. PDF

Luscombe, N.M., Babu, M.M., Yu, H., Snyder, M., Teichmann, S.A., Gerstein, M. (2004) Genomic analysis of regulatory
network dynamics reveals large topological change. Nature, 431, 308-312. PDFSuppl info


Kummerfeld, S.K. & Teichmann, S.A. (2005) Relative rates of gene fusion and fission in multi-domain proteins. Trends Genet., 21, 25-30. PDF Suppl Info

Nye, T.M.W., Berzuini, C., Gilks, W., Babu, M.M. & Teichmann, S.A. (2005) Statistical analysis of domains in interacting protein pairs. Bioinformatics, 21, 993-1001. PDF Suppl info

Vogel, C., Teichmann, S.A. & Pereira-Leal, J. (2005) The relationship between domain duplication and recombination. J. Mol. Biol., 346, 355-365. PDF

Pereira-Leal, J. & Teichmann, S.A. (2005) Novel specificities emerge by step-wise duplication of functional modules. Genome Res., 15, 552-559. PDF Suppl mat

Kunin, V., Teichmann, S.A., Huynen, M. & Ouzounis, C.A. (2005) The properties of sequence space depend on experimental design.  Bioinformatics, 21, 2618-22. PDF

Carninci, P....Teichmann, S.A., al. (2005) The transcriptional landscape of the mammalian genomes. Science, 309, 1559-1563. PDF

Wright, C.F., Teichmann, S.A., Clarke, J. & Dobson, C.M. (2005) Aggregation and evolution of multi-domain proteins:
the importance of sequence conservation. Nature, 438, 878-881. PDF


Kummerfeld, S.K. & Teichmann, S.A. (2006) DBD: a transcription factor prediction database. Nucleic Acids Res., 34, D74-81. PDF

Nye, T.M.W., Berzuini, C., Gilks, W.R., Babu, M.M. & Teichmann, S.A. (2006) Predicting the strongest domain-domain contact in interacting
protein pairs. Stat. Appl. Genet. Mol. Biol., 5 (1), 5. PDF

Babu, M.M., Teichmann, S.A. & Aravind, L. (2006) Evolutionary dynamics of prokaryotic transcriptional regulators. J. Mol. Biol., 358, 614-633. PDF Research Higlight in Nature Rev Microbiol

Han, J.-H., Kerrison, N.D., Chothia, C. & Teichmann, S.A. (2006) Divergence of inter-domain geometry in two-domain proteins. Structure, 14, 935-945. PDF

Adryan, B. & Teichmann, S.A. (2006) A systematic review of site-specific transcription factors in the fruit fly Drosophila melanogaster. Bioinformatics, 22, 1532-3. PDF

Levy, E., Pereira-Leal, J., Chothia, C & Teichmann, S.A. (2006) 3DComplex: a structural classification of protein complexes. PLoS Comp Biol., 2, e155. *Faculty of 1000 Must Read*


Talavera, D., Vogel, C., Orozco, M., Teichmann, S.A. & de la Cruz, X. (2007) The (in)dependence of alternative splicing and gene duplication. PLoS Comp Biol., 3, e33.

Han, J.-H., Batey, S., Nickson, A.D., Teichmann, S.A. & Clarke, J. (2007) The folding and evolution of multidomain proteins. Nature Rev Mol Cell Biol, 8, 319-330.

Pereira-Leal, J., Levy, E.D., Kamp, C. & Teichmann, S.A. (2007) Evolution of protein complexes by duplication of homomeric interactions. Genome Biol, 8, R51.

Invited papers:


Teichmann, S.A. (1997) Protein families in bacterial genomes. B.I.F. Futura, 12, 117-118.


Teichmann, S.A. and Mitchison, G. (1999) Making family trees from gene families. Nature Genetics, 21, 66-67. PDFPS

O'Reilly, M., Teichmann, S.A. and Rhodes, D. (1999) Telomerases. Curr. Op. Struc. Biol., 9, 56-65. PDF

Teichmann, S.A., Chothia, C. and Gerstein, M. (1999) Advances in Structural Genomics. Curr. Op. Struc. Biol., 9, 390-399. PDF Suppl Info


Teichmann, S.A. and Mitchison, G. (2000) Computing protein function. Nature Biotechnology, 18, 27. PDFPS

Teichmann, S.A. (2000) Genome evolution: analysing proteomes with new methods. B.I.F Futura, 15, 57-59.


Teichmann, S.A. & Babu, M.M. (2002) Conservation of gene co-regulation in prokaryotes and eukaryotes. Trends Biotech., 20, 407-410. PDF


Chothia, C., Gough, J., Vogel, C. & Teichmann, S.A. (2003) Evolution of the Protein Repertoire. Science, 300, 1701-1703. PDF


Schwabe, J.W. & Teichmann, S.A. (2004) Nuclear Receptors: the Evolution of Diversity. Sci. STKE, 2004, pe4. PDF

Vogel, C., Bashton, M., Kerrison, N., D., Chothia, C. & Teichmann, S.A. (2004) Structure, function and evolution of multi-domain proteins. Curr. Op. Struc. Biol., 14, 208-216. PDF

Babu, M.M., Luscombe, N.M., Aravind, L., Gerstein, M. & Teichmann, S.A. (2004) Structure and evolution of transcriptional regulatory networks. Curr. Op. Struc. Biol., 14, 283-291. PDFJournal cover


Bornberg-Bauer, E., Beausart, F., Kummerfeld, S.K., Teichmann, S.A. & Weiner, J. (2005) The evolution of domain arrangements in proteins and interaction networks. Cell. Mol. Life Sci, 62, 435-445. PDF

Teichmann, S.A., Bornberg-Bauer, E. & Luscombe, N.M. (2005) Meeting report: Transcriptional networking. Genome Biol.,
6, 344. PDF


Pereira-Leal, J.B., Levy, E.D. & Teichmann, S.A. (2006) The origins and evolution of functional modules: lessons from protein complexes. Phil. Trans. B, 361, 507-517. PDF
Teichmann, S.A.  & Grishin, N.V. (2006) Sequences and Topology: from methods to meaning. Curr. Op. Struc. Biol., 16, 359-261. PDF

Book Chapters:

In "Bioinformatics: Genes, Proteins and Computers" (J. Thornton, C. Orengo and D. Jones, eds.):
From Structure-Based Genome Annotation to Understanding Genes and Proteins. (Chapter 11)
Global Approaches for Studying Protein-Protein Interactions. (Chapter 12)