1.10.1 Protozoan pheromone proteins
1.100.1 Cytochrome P450
1.1.1 Globin-like
1.101.1 FIS-like
1.102.1 Trp repressor
1.103.1 MHC class II-associated invariant chain ectoplasmic trimerization domain
1.104.1 Aldehyde ferredoxin oxidoreductase, C-terminal domains
1.105.1 Vanadium-dependent haloperoxidase
1.106.1 sigma70 subunit fragment from RNA polymerase
1.107.1 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain
1.108.1 Bluetongue virus coat protein vp7 (BTV-10 vp7), alpha-helical domain
1.109.1 GTPase activation domain, GAP
1.11.1 Acyl-CoA binding protein
1.11.2 Second domain of FERM
1.110.1 Ras GEF
1.111.6 Protein prenylyltransferase
1.111.8 Tetratricopeptide repeat (TPR)
1.111.7 14-3-3 protein
1.111.3 Sec7 domain
1.111.5 Bacterial muramidases
1.111.4 Lipovitellin-phosvitin complex, superhelical domain
1.111.10 Clathrin heavy-chain linker domain
1.111.11 Cytochrome c oxidase subunit E
1.111.1 ARM repeat
1.111.2 Ankyrin repeat
1.111.9 ENTH/VHS domain
1.112.1 Lipoxigenase
1.113.1 gene 59 helicase assembly protein
1.114.1 delta prime subunit of DNA polymerase III, C-terminal domain
1.115.1 Tetracyclin repressor (Tet-repressor, TetR), C-terminal domain
1.116.1 Nuclear receptor ligand-binding domain
1.117.1 Phospholipase C/P1 nuclease
1.118.1 Serum albumin
1.119.1 L-aspartase-like
1.120.1 Terpenoid synthases
1.12.1 Kix domain of CBP (creb binding protein)
1.121.1 GroEL-like chaperones, ATPase domain
1.122.1 Chorismate mutase II
1.123.1 Peridinin-chlorophyll protein
1.124.1 Heme oxygenase-1 (HO-1)
1.125.1 Phospholipase A2, PLA2
1.126.1 Fungal elicitin, plant patogen
1.127.1 Methanol dehydrogenase, light chain
1.127.5 Nuclear receptor coactivator Src-1
1.127.4 Moesin tail domain
1.127.6 Proteinase A inhibitor IA3
1.127.2 Transducin (heterotrimeric G protein), gamma chain
1.127.3 Fe-only hydrogenase smaller subunit
1.128.1 Multiheme cytochromes
1.13.1 alpha-2-Macroglobulin receptor associated protein (RAP) domain 1
1.14.1 Thermostable subdomain from chicken villin headpiece
1.15.1 TAF(II)230 TBP-binding fragment
1.16.1 S15/NS1 RNA-binding domain
1.17.1 p8-MTCP1
1.18.1 T4 endonuclease V
1.19.1 Lysin
1.2.8 Fe,Mn superoxide dismutase (SOD), N-terminal domain
1.2.5 A class II aminoacyl-tRNA synthetase N-domain
1.2.3 Theta subunit of DNA polymerase III
1.2.4 Effector domain of the protein kinase pkn/prk1
1.20.1 ATP syntase (F1-ATPase), gamma subunit
1.2.2 Chaperone J-domain
1.2.7 Epsilon subunit of F1F0-ATP synthase C-terminal domain
1.2.1 GreA transcript cleavage protein, N-terminal domain
1.2.6 Eukaryotic DNA topoisomerase I, dispensable insert domain
1.21.1 Zn2+ DD-carboxypeptidase, N-terminal domain
1.22.1 HMG-box
1.23.1 Histone-fold
1.24.3 Mitochondrial import receptor subunit Tom20
1.24.1 Diol dehydratase, gamma subunit
1.24.2 Methane monooxygenase hydrolase, gamma subunit
1.25.9 Histidine-containing phosphotransfer domain, HPT domain
1.25.8 Proteasome activator reg(alpha)
1.25.6 Acyl-CoA dehydrogenase (flavoprotein), C-terminal domain
1.25.7 FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP)
1.25.2 Aspartate receptor, ligand-binding domain
1.25.1 Apolipoprotein
1.25.5 TMV-like viral coat proteins
1.25.4 Hemerythrin
1.25.3 Cytochromes
1.26.1 Ferritin-like
1.27.1 4-helical cytokines
1.28.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
1.29.3 Retrovirus capsid protein C-terminal domain
1.29.1 ACP-like
1.29.2 Colicin E immunity proteins
1.30.1 Domain of the SRP/SRP receptor G-proteins
1.3.1 Cytochrome c
1.30.2 Bromodomain
1.31.2 Homodimeric domain of signal transducing histidine kinase
1.31.1 ROP protein
1.32.1 Dimerization-anchoring domain of cAMP-dependent type II PK regulatory subunit
1.33.1 Transcription factor IIA (TFIIA), N-terminal domain
1.34.1 Ectatomin, A & B chains
1.35.1 SinR repressor (dimerisation domain)-SinI anti-repressor complex
1.36.1 lambda repressor-like DNA-binding domains
1.37.1 TetR/NARL DNA-binding domain
1.38.1 Signal peptide-binding domain
1.39.1 Binding domain of Skn-1
1.4.2 Methylated DNA-protein cysteine methyltransferase, C-terminal domain
1.4.3 DNA-binding domain from the dead ringer protein
1.4.7 N-terminal Zn binding domain of HIV integrase
1.40.1 Helix-loop-helix DNA-binding domain
1.4.6 Ribosomal protein L11, C-terminal domain
1.4.4 TnsA endonuclease, C-terminal domain
1.4.8 RNA polymerase subunit RPB10
1.4.1 Homeodomain-like
1.4.5 "Winged helix" DNA-binding domain
1.41.1 EF-hand
1.41.3 Cloroperoxidase
1.41.2 Insect pheromon/odorant-binding proteins
1.42.1 Calponin-homology domain, CH-domain
1.43.1 Domain of poly(ADP-ribose) polymerase
1.44.1 MDM2
1.45.1 Met repressor-like
1.46.1 Disulphide-bond formation facilitator (DSBA), insertion domain
1.47.1 Glutathione S-transferases, C-terminal domain
1.48.1 Methionine synthase domain
1.48.2 Pyrimidine nucleoside phosphorylase N-terminal domain
1.49.2 Syntaxin 1A N-terminal domain
1.49.1 STAT
1.5.3 N-terminal domain of phosphatidylinositol transfer protein sec14p
1.5.2 UBA domain
1.5.4 Elongation factor TFIIS domain 2
1.5.1 DNA helicase RuvA subunit, C-terminal domain
1.50.3 Conserved domain common to transcription factors TFIIS, elongin A, CRSP70
1.50.2 Transferrin receptor ectodomain, C-terminal domain
1.50.1 N-terminal domain of cbl (N-cbl)
1.51.1 Anaphylotoxins (complement system)
1.52.1 Cytochrome c oxidase subunit h
1.53.1 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin
1.54.1 p53 tetramerization domain
1.55.1 Domain of early E2A DNA-binding protein, ADDBP
1.56.1 Prokaryotic DNA-bending protein
1.57.1 CO dehydrogenase ISP C-domain like
1.58.1 Protein HNS-dependent expression A; HdeA
1.59.1 Chemotaxis receptor methyltransferase CheR, N-terminal domain
1.60.6 DNA polymerase beta, N-terminal (8 kD)-domain
1.60.8 MRF-2 DNA-binding domain
1.60.1 SAM/Pointed domain
1.60.7 5' to 3' exonuclease, C-terminal subdomain
1.60.9 HRDC domain from RecQ helicase
1.60.2 DNA helicase RuvA subunit, middle domain
1.60.11 Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain
1.60.4 DNA repair protein Rad51, N-terminal domain
1.60.10 lambda integrase-like, N-terminal domain
1.60.3 C-terminal domain of RNA polymerase alpha subunit
1.60.5 Barrier-to-autointegration factor, BAF
1.6.1 Putative DNA-binding domain
1.61.1 Retroviral matrix proteins
1.62.1 Hepatitis B viral capsid (hbcag)
1.63.1 Apolipophorin-III
1.64.1 Saposin
1.65.1 Annexin
1.66.1 Transducin (alpha subunit), insertion domain
1.67.1 Thermolysin-like metalloproteases, C-terminal domain
1.68.1 Wiscott-Aldrich syndrome protein, WASP, C-terminal domain
1.69.1 C-terminal domain of alpha and beta subunits of F1 ATP synthase
1.7.4 beta-Tubulin binding post-chaperonin cofactor Rbl2p
1.7.3 Succinate dehydrogenase/fumarate reductase C-terminal domain
1.7.1 Spectrin repeat
1.70.1 N-terminal domain of the delta subunit of the F1F0-ATP synthase
1.7.2 Enzyme IIa from lactose specific PTS, IIa-lac
1.71.1 Functional domain of the splicing factor Prp18
1.72.1 Retrovirus capsid protein, N-terminal core domain
1.73.1 Cyclin-like
1.74.1 Ribosomal protein S7
1.75.1 Iron-dependent represor protein, dimerization domain
1.76.1 DEATH domain
1.77.1 Antitermination factor NusB
1.78.1 N-terminal domain of DnaB helicase
1.79.1 FliG C-terminal domain
1.8.1 Bacterial immunoglobulin/albumin-binding domains
1.80.1 Guanido kinases
1.81.1 Scaffolding protein gpD of bacteriophage procapsid
1.82.1 Hemocyanin, N-terminal domain
1.83.1 Di-copper centre-containing domain
1.84.1 DBL homology domain
1.85.1 LigA subunit of an aromatic-ring-opening dioxygenase LigAB
1.86.1 Methyl-coenzyme M reductase alpha and beta chain C-terminal domain
1.87.1 Transcription factor STAT-4 N-domain
1.88.1 Regulator of G-protein signalling, RGS
1.89.1 Carbamoyl phosphate synthetase, large subunit connection domain
1.90.1 Heme-dependent peroxidases
1.9.1 Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex
1.91.1 Influenza virus matrix protein M1
1.92.1 DNA-glycosylase
1.93.1 Anticodon-binding (C-terminal) domain of glutamyl-tRNA synthetase (GluRS)
1.94.1 R1 subunit of ribonucleotide reductase, N-terminal domain
1.95.1 FAD-binding (C-terminal) domain of DNA photolyase
1.96.1 6-phosphogluconate dehydrogenase C-terminal domain-like
1.97.1 Uteroglobin-like
1.98.4 Terpenoid cylases/Protein prenyltransferases
1.98.1 Six-hairpin glycosyltransferases
1.98.2 Seven-hairpin glycosyltransferases
1.98.3 Chondroitin AC/alginate lyase
1.99.1 Citrate synthase
2.1.6 Cadherin
2.1.13 Invasin/intimin cell-adhesion fragments
2.1.8 Cu,Zn superoxide dismutase-like
2.1.9 Clathrin adaptor appendage domain
2.10.1 Crystallins/protein S/yeast killer toxin
2.1.4 beta-Galactosidase/glucuronidase domain
2.1.10 PapD-like
2.1.1 Immunoglobulin
2.1.11 Purple acid phosphatase, N-terminal domain
2.1.2 Fibronectin type III
2.1.3 PKD domain
2.1.5 Transglutaminase
2.1.12 Superoxide reductase-like
2.1.7 Actinoxanthin-like
2.11.1 Lipase/lipooxygenase domain
2.12.2 Viral proteins
2.12.1 PHM/PNGase F
2.13.1 Calpain large subunit, middle domain (domain III)
2.14.1 HSP20-like chaperones
2.15.1 Ecotin, trypsin inhibitor
2.16.1 Phosphatidylethanolamine binding protein
2.17.1 Galactose-binding domain-like
2.18.1 Segmented RNA-genome viruses' proteins
2.19.1 F-MuLV receptor-binding domain
2.2.7 Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor
2.2.6 Cytochrome f, large domain
2.2.3 Bacterial adhesins
2.20.1 Adenovirus fiber protein head domain (knob domain)
2.2.4 Receptor domain from alpha-2-macroglobulin
2.2.5 p53-like transcription factors
2.2.1 Diphtheria toxin, C-terminal domain
2.2.2 Carbohydrate-binding domain
2.21.1 TNF-like
2.22.1 Spermadhesin, CUB domain
2.23.1 Chondroitinase AC, C-terminal domain
2.24.1 Osmotin, thaumatin-like protein
2.25.1 SMAD/FHA domain
2.26.1 Soluble secreted chemokine inhibitor, VCCI
2.27.1 Paculovirus p35
2.28.1 ConA-like lectins/glucanases
2.29.3 Chondroitinase AC, central domain
2.29.1 beta-Galactosidase, domain 5
2.29.2 Copper amine oxidase, domain 3 (catalytic)
2.3.3 Transthyretin (synonym: prealbumin)
2.30.1 gp9
2.3.4 Aromatic compound dioxygenase
2.3.2 VHL
2.3.1 Starch-binding domain
2.31.1 ISP domain
2.32.3 Myosin S1 fragment, N-terminal domain
2.32.4 Electron transport accessory proteins
2.32.5 Translation proteins SH3-like domain
2.32.6 CcdB
2.32.7 DNA-binding domain of retroviral integrase
2.32.2 SH3-domain
2.32.1 C-terminal domain of biotin and diphtheria toxin repressors
2.33.2 SacY-like RNA-binding domain
2.33.1 GroES-like
2.34.1 PDZ domain-like
2.35.1 N-terminal domains of the minor coat protein g3p
2.36.1 Sm motif of small nuclear ribonucleoproteins,  SNRNP
2.37.1 Ribosomal protein L14
2.38.6 C-terminal domain of molybdate-dependent transcriptional regulator ModE
2.38.7 Histidine kinase CheA, C-terminal domain
2.38.1 Staphylococcal nuclease
2.38.2 Bacterial enterotoxins
2.38.3 Tissue inhibitor of metalloproteinases, TIMP
2.38.4 Nucleic acid-binding proteins
2.38.5 Inorganic pyrophosphatase
2.39.1 Photosynthetic reaction centre, H-chain, cytoplasmic domain
2.40.4 STI-like
2.40.3 Agglutinin
2.40.2 Ricin B-like lectins
2.4.1 alpha-Amylase inhibitor tendamistat
2.40.1 Cytokine
2.40.5 Histidine-rich actin-binding protein (hisactophilin)
2.41.2 L-fucose isomerase, C-terminal domain
2.41.3 Translation factors
2.41.1 Ferredoxin reductase-like, FAD-linked (N-terminal) domain
2.42.1 Elongation factor Tu (EF-Tu), C-terminal domain
2.43.1 FMT C-terminal domain-like
2.44.1 Trypsin-like serine proteases
2.45.1 mu transposase, C-terminal domain
2.46.2 Alanine racemase-like, C-terminal domain
2.46.1 N-terminal domain of alpha and beta subunits of F1 ATP synthase
2.47.1 Acid proteases
2.48.1 Isoleucyl-tRNA synthetase (IleRS) editing domain
2.49.1 Barwin-like endoglucanases
2.49.2 ADC-like
2.5.1 Cupredoxins
2.50.1 Ribosomal protein L25-like
2.51.1 Core binding factor beta
2.52.1 PH domain-like
2.53.1 Transcription factor IIA (TFIIA), N-terminal domain
2.54.1 Herpes virus serine proteinase, assemblin
2.55.1 Pyruvate kinase beta-barrel domain
2.56.1 Lipocalins
2.57.2 Metalloprotease inhibitor
2.57.1 Avidin/streptavidin
2.58.1 Cyclophilin (peptidylprolyl isomerase)
2.59.1 Oncogene products
2.6.1 C2 domain (Calcium/lipid-binding domain, CaLB)
2.60.1 Extracytoplasmic domain of cation-dependent mannose 6-phosphate receptor
2.6.3 Pollen allergen PHL P 2
2.6.2 Periplasmic chaperone C-domain
2.6.4 Rab geranylgeranyltransferase alpha-subunit, insert domain
2.61.1 Hemopexin-like domain
2.62.1 Tachylectin-2
2.63.3 Thermostable phytase (3-phytase)
2.63.1 Sialidases (neuraminidases)
2.63.2 Soluble quinoprotein glucose dehydrogenase
2.64.1 Galactose oxidase, central domain
2.64.2 Methylamine dehydrogenase, H-chain
2.64.5 Clathrin heavy-chain terminal domain
2.64.4 Regulator of chromosome condensation RCC1
2.64.6 Prolyl oligopeptidase, N-terminal domain
2.64.3 Trp-Asp repeat (WD-repeat)
2.65.2 C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase
2.65.1 Quinoprotein alcohol dehydrogenase
2.66.1 alpha-Amylases, C-terminal beta-sheet domain
2.67.2 Carbohydrate binding domain
2.67.1 WW domain
2.68.1 Head domain of nucleotide exchange factor GrpE
2.69.1 Carbonic anhydrase
2.7.1 TRAF domain
2.70.1 Bacteriochlorophyl A protein
2.71.1 Outer surface protein A
2.72.2 delta-Endotoxin (insectocide), middle domain
2.72.1 Vitelline membrane outer protein-I (VMO-I)
2.72.3 Mannose-binding lectins
2.73.1 alpha-D-mannose-specific plant lectins
2.74.1 Metalloprotease, C-terminal domain
2.75.1 Pectin lyase-like
2.76.1 Trimeric LpxA-like enzymes
2.77.4 cAMP-binding domain
2.77.6 Trp RNA-binding attenuation protein (TRAP)
2.77.5 Regulatory protein AraC
2.77.2 Phosphomannose isomerase
2.77.1 RmlC-like
2.77.3 Penicillin syntase
2.78.1 Adenovirus fibre shaft
2.79.2 Rudiment single hybrid motif
2.79.1 Single hybrid motif
2.79.3 Duplicated hybrid motif
2.80.3 Urease, beta-subunit
2.80.5 ACMNPV telokin-like protein
2.80.4 Deoxyuridine 5'-triphosphate nucleotidohydrolase (dUTPase)
2.8.1 Neurophysin II
2.80.2 Head decoration protein D (gpD, major capsid protein D)
2.80.1 Antifreeze protein type III
2.81.1 Hedgehog/intein (Hint) domain
2.82.1 LexA/Signal peptidase
2.83.1 Cyanovirin-N
2.84.1 Head-binding domain of phage p22 tailspike protein
2.85.1 E2 regulatory, transactivation domain
2.86.1 alpha-Subunit of urease, composite domain
2.87.1 Epsilon subunit of F1F0-ATP synthase N-terminal domain
2.9.1 Viral coat and capsid proteins
3.1.8 Glycosyltransferases
3.1.9 Metallo-dependent hydrolases
3.1.6 PLP-binding barrel
3.1.1 Triosephosphate isomerase (TIM)
3.1.3 Thiamin phosphate synthase
3.1.4 FMN-linked oxidoreductases
3.1.5 Inosine monophosphate dehydrogenase (IMPDH)
3.1.2 Ribulose-phoshate binding barrel
3.1.7 NAD(P)-linked oxidoreductase
3.1.10 Aldolase
3.1.15 Xylose isomerase-like
3.1.24 PEP mutase/Isocitrate lyase
3.1.21 Dihydropteroate synthetase
3.1.14 RuBisCo, C-terminal domain
3.1.16 Bacterial luciferase-like
3.1.19 Cobalamin (vitamin B12)-dependent enzymes
3.10.1 C-terminal domain of phosphatidylinositol transfer protein sec14p
3.10.2 SpoIIaa
3.1.20 tRNA-guanine transglycosylase
3.1.17 Quinolinic acid phosphoribosyltransferase, C-terminal domain
3.1.18 Phosphatidylinositol-specific phospholipase C (PI-PLC)
3.1.23 Methylenetetrahydrofolate reductase
3.1.12 Phospho<i>enol</i>pyruvate/pyruvate domain
3.1.22 Uroporphyrinogen decarboxylase, UROD
3.1.13 Malate synthase G
3.1.11 Enolase C-terminal domain-like
3.11.1 ClpP/crotonase
3.12.1 BRCT domain from DNA-repair protein XRCC1
3.13.1 beta-subunit of the lumazine synthase/riboflavin synthase complex
3.14.1 Caspase-like
3.15.1 DNA glycosylase
3.16.1 Catalytic domain of malonyl-CoA ACP transacylase
3.17.7 N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) mutase PurE
3.17.2 CheY-like
3.17.11 Formate/glycerate dehydrogenase catalytic domain-like
3.17.8 Cutinase-like
3.17.9 Esterase/acetylhydrolase
3.17.12 Type II 3-dehydroquinate dehydratase
3.17.10 Beta-D-glucan exohydrolase, C-terminal domain
3.17.6 Ornithine decarboxylase N-terminal "wing" domain
3.17.5 Cobalamin (vitamin B12)-binding domain
3.17.3 Succinyl-CoA synthetase domains
3.17.1 Catalase, C-terminal domain
3.17.4 Flavoproteins
3.18.1 Methylglyoxal synthase-like
3.19.1 Ferredoxin reductase-like, C-terminal NADP-linked domain
3.20.3 UDP-glucose dehydrogenase (UDPGDH), C-terminal (UDP-binding) domain
3.20.1 Nucleotidylyl transferase
3.2.1 NAD(P)-binding Rossmann-fold domains
3.20.2 Adenine nucleotide alpha hydrolases
3.21.1 Pyrimidine nucleoside phosphorylase central domain
3.22.1 N-terminal domain of DNA photolyase
3.23.1 N-terminal domain of MurD (UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase)
3.24.1 ETFP adenine nucleotide-binding domain-like
3.25.1 Epoxide hydrolase, N-terminal domain
3.26.1 Biotin carboxylase N-terminal domain-like
3.27.1 DHS-like NAD/FAD-binding domain
3.28.1 Tubulin, GTPase domain
3.29.1 Cysteine hydrolase
3.3.1 FAD/NAD(P)-binding domain
3.30.1 Glucosamine 6-phosphate deaminase
3.31.1 Thiamin diphosphate-binding fold (THDP-binding)
3.32.1 P-loop containing nucleotide triphosphate hydrolases
3.33.1 Fructose permease, subunit IIb
3.34.1 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)
3.35.1 Methylesterase CheB, C-terminal domain
3.36.1 Subtilases
3.37.1 Arginase/deacetylase
3.38.1 CoA-dependent acyltransferases
3.39.2 Enzyme IIB-cellobiose
3.39.1 Phosphotyrosine protein phosphatases I
3.4.1 Nucleotide-binding domain
3.40.1 (Phosphotyrosine protein) phosphatases II
3.41.1 Rhodanese/Cell cycle control phosphatase
3.42.1 Thioredoxin-like
3.43.1 Transketolase C-terminal domain-like
3.44.1 Pyruvate kinase, C-terminal domain
3.45.1 Leucine aminopeptidase, N-terminal domain
3.46.3 Maf/Ham1
3.46.2 Diol dehydratase, beta subunit
3.46.1 Anticodon-binding domain of Class II aaRS
3.47.1 Restriction endonuclease-like
3.47.3 Eukaryotic RPB5 N-terminal domain
3.47.2 tRNA splicing endonuclease, C-terminal domain
3.48.2 beta-carbonic anhydrase
3.48.1 Resolvase-like
3.49.1 IIA domain of mannose transporter, IIA-Man
3.50.4 Middle domain of eukaryotic peptide chain release factor subunit 1, ERF1
3.50.3 Ribonuclease H-like
3.5.1 Cellulases
3.50.1 Actin-like ATPase domain
3.50.2 Creatinase, N-terminal domain
3.50.5 Methylated DNA-protein cysteine methyltransferase domain
3.51.1 Hydrogenase maturating endopeptidase HybD
3.51.4 Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase)
3.51.6 LigB subunit of an aromatic-ring-opening dioxygenase LigAB
3.51.5 Zn-dependent exopeptidases
3.51.3 Peptidyl-tRNA hydrolase
3.51.2 Purine and uridine phosphorylases
3.52.1 Molybdenumm cofactor biosynthesis protein MogA
3.53.1 Aminoacid dehydrogenase-like, N-terminal domain
3.54.1 Glutamate ligase domain
3.55.1 Phosphoglycerate mutase-like
3.56.1 PRTase-like
3.57.1 Integrin A (or I) domain
3.58.1 Glutaconate-CoA transferase subunits
3.59.1 Pyruvate-ferredoxin oxidoreductase, PFOR, domain III
3.60.1 Formyltransferase
3.6.1 PFL-like glycyl radical enzymes
3.61.1 S-adenosyl-L-methionine-dependent methyltransferases
3.62.1 PLP-dependent transferases
3.63.1 Class I glutamine amidotransferases (GAT)
3.64.1 Nucleotide-diphospho-sugar transferases
3.65.1 alpha/beta-Hydrolases
3.66.1 Nucleoside hydrolase
3.67.1 Dihydrofolate reductases
3.68.1 Ribokinase-like
3.68.2 MurD-like peptide ligases, catalytic domain
3.69.1 Carbamate kinase
3.7.3 Carbamoyl phosphate synthetase, small subunit N-terminal domain
3.7.4 Transferrin receptor ectodomain, apical domain
3.7.5 GroEL-like chaperone, apical domain
3.7.2 Aconitase, C-terminal domain
3.7.1 Phosphohistidine domain
3.70.1 Class II aldolase
3.71.1 Cytosolic phospholipase A2 catalytic domain
3.72.1 Phosphatase/sulphatase
3.73.1 Isocitrate & isopropylmalate dehydrogenases
3.74.2 Glutamate racemase
3.74.1 Aspartate/ornithine carbamoyltransferase
3.75.1 Tryptophan synthase beta subunit-like PLP-dependent enzymes
3.76.1 SIS domain
3.77.1 Formate dehydrogenase/DMSO reductase, domains 1-3
3.78.1 Aldehyde reductase (dehydrogenase), ALDH
3.79.1 Aconitase, first 3 domains
3.8.1 Barstar (barnase inhibitor)
3.80.1 Phosphoglucomutase, first 3 domains
3.81.1 L-fucose isomerase, N-terminal and second domains
3.82.1 Phosphoglycerate kinase
3.83.1 beta-Glucosyltransferase & glycogen phosphorylase
3.84.1 Glutaminase/Asparaginase
3.85.1 Phosphofructokinase
3.86.1 Cobalt precorrin-4 methyltransferase CbiF
3.87.1 Phosphoenolpyruvate carboxykinase (ATP-oxaloacetate carboxy-liase)
3.88.1 Chelatase
3.88.2 "Helical backbone" metal receptor
3.89.1 Periplasmic binding protein-like I
3.9.2 L domain-like
3.90.1 Periplasmic binding protein-like II
3.9.1 RNI-like
3.91.1 Thiolase-like
3.92.1 Fe-only hydrogenase
3.93.1 Cytidine deaminase
4.10.1 DNA-binding domain
4.100.1 Nucleoside triphosphate pyrophosphorylase (MutT)
4.1.1 Microbial ribonucleases
4.101.1 5'-nucleotidase (syn. UDP-sugar hydrolase), C-terminal domain
4.102.1 Hypothetica protein HI1434 (YbaK homologue)
4.103.1 Thymidylate synthase/dCMP hydroxymethylase
4.104.1 Bacteriophage T7 lysozyme (Zn amidase)
4.105.1 Streptomyces lysozyme
4.106.1 Cytochrome b5
4.107.1 DNA topoisomerase I domain
4.108.1 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
4.109.1 Sporulation responce regulatory protein Spo0B
4.110.1 Ribonuclease Rh-like
4.11.1 Penicillin-binding protein 2x (pbp-2x), c-terminal domain
4.111.1 Ornithine decarboxylase C-terminal domain
4.112.1 Amidinotransferase
4.113.1 Creatinase/aminopeptidase
4.114.1 Glutamine synthase/guanidino kinase catalytic domain
4.115.2 Phosphoglucomutase, C-terminal domain
4.115.1 TATA-box binding protein-like
4.115.3 Bet v1-like
4.116.1 S-adenosylmethionine synthetase. MAT
4.117.1 DNA clamp
4.118.1 Mitochondrial processing peptidase, MPP
4.119.1 Molybdemum cofactor-binding domain
4.12.1 HIT-like
4.120.1 Sulfite reductase hemoprotein (SiRHP), domains 2 and 4
4.121.1 The spindle assembly checkpoint protein mad2
4.122.1 Phospholipase D/nuclease
4.123.1 Monooxygenase (hydroxylase) regulatory protein
4.124.1 B3/B4 domain of PheRS, PheT
4.125.1 Aminoimidazole ribonucleotide synthetase (PurM) C-terminal domain
4.126.1 Ribosomal protein S8
4.127.1 Ribosomal protein L6
4.128.1 Glutathione synthetase ATP-binding domain-like
4.128.2 DNA ligase/mRNA capping enzyme, catalytic domain
4.129.1 SAICAR synthase-like
4.13.1 Ribosomal protein S5 domain 2-like
4.130.1 Protein kinase-like (PK-like)
4.131.1 FAD-binding domain
4.132.1 Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain
4.133.1 Methenyltetrahydromethanopterin cyclohydrolase
4.134.1 Ubiquitin-protein ligase E3a, Hect catalytic domain (E6ap)
4.135.1 Nitrile hydratase alpha chain
4.136.1 4'-Phosphopantetheinyl transferase SFP
4.137.1 DNase I-like
4.138.1 Aldehyde ferredoxin oxidoreductase, N-terminal domain
4.139.1 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
4.14.3 First domain of FERM
4.14.9 Translation initiation factor IF3, N-terminal domain
4.140.1 L-aminopeptidase D-Ala-esterase/amidase
4.14.2 Ubiquitin-related
4.14.1 Immunoglobulin-binding domains
4.14.5 CAD domain
4.14.6 Staphylokinase/streptokinase
4.14.7 2Fe-2S ferredoxin-related
4.14.4 Ras-binding domain, RBD
4.14.8 Superantigen toxins, C-terminal domain
4.14.10 Glutamine synthetase, N-terminal domain
4.141.1 Histidine decarboxylase
4.142.1 S-adenosylmethionine decarboxylase
4.143.1 Metallo-hydrolase
4.144.1 Protein serine/threonine phosphatase 2C
4.145.1 Metallo-dependent phosphatases
4.146.1 Anthranilate synthase aminodeoxyisochorismate synthase/lyase subunit TrpE
4.147.1 Lactate & malate dehydrogenases, C-terminal domain
4.148.1 DNA breaking-rejoining enzymes
4.149.1 SMAD MH1 domain
4.150.1 Ribosome inactivating proteins (RIP)
4.15.1 FAD-linked reductases, C-terminal domain
4.151.1 ADP-ribosylation
4.152.1 Peptide deformylase
4.153.1 Succinate dehydrogenase/fumarate reductase catalytic domain
4.154.1 C-type lectin-like
4.155.1 Scavenger receptor cysteine-rich (SRCR) domain
4.155.2 A heparin-binding domain
4.156.1 Fibrinogen C-terminal domains
4.157.1 gp120 core
4.158.1 Methionine synthase (activation domain)
4.159.1 Nitric oxide (NO) synthase oxygenase domain
4.16.2 Copper amine oxidase, domains 1 and 2
4.16.4 Uracil-DNA glycosylase inhibitor protein
4.16.1 Cystatin/monellin
4.160.1 Penicillin-binding protein 2x (pbp-2x), N-terminal domain
4.16.3 NTF2-like
4.161.1 Sulfite oxidase, middle catalytic domain
4.162.1 Fumarylacetoacetate hydrolase, FAH
4.163.1 Aromatic aminoacid monoxygenases, catalytic and oligomerization domains
4.164.1 Substrate-binding domain of HMG-CoA reductase
4.165.1 Conserved core of transcriptional regulatory protein vp16
4.166.1 Insert subdomain of RNA polymerase alpha subunit N-terminal domain
4.167.1 Baseplate structural protein gp11
4.168.1 Phycoerythrin 545 alpha-subunits
4.17.1 Transcriptional coactivator PC4 C-terminal domain
4.18.1 MHC antigen-recognition domain
4.19.1 Ubiquitin conjugating enzyme
4.20.1 Diaminopimelate epimerase
4.2.1 Lysozyme-like
4.21.1 Green fluorescent protein, GFP
4.22.1 Transcriptional factor tubby, C-terminal domain
4.23.1 Pilin
4.24.1 Acidic mitochondrial matrix protein p32
4.25.3 Chitinase A, insertion domain
4.25.2 Colicin E3 immunity protein
4.25.1 FKBP-like
4.26.1 Ribosomal protein S19
4.27.1 Allophycocyanin linker chain (domain)
4.28.1 Cdc48 domain 2-like
4.29.1 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase
4.3.1 Cysteine proteinases
4.30.1 DNA-binding domain of Mlu1-box binding protein MBP1
4.31.1 Heme-binding protein A (HasA)
4.32.1 CBS-domain
4.33.1 Thioesterase/thiol ester dehydrase-isomerase
4.34.1 PIN, a protein inhibitor of neuronal nitric oxide synthase
4.35.1 CI-2 family of serine protease inhibitors
4.36.2 Quinolinic acid phosphoribosyltransferase, N-terminal domain
4.36.3 Pyrimidine nucleoside phosphorylase C-terminal domain
4.36.1 CO dehydrogenase molybdoprotein N-domain-like
4.37.1 POZ domain
4.38.1 Elongation factor Ts (EF-Ts), dimerisation domain
4.39.1 Fe,Mn superoxide dismutase (SOD), C-terminal domain
4.4.1 His-Me finger endonucleases
4.40.1 Ribosomal protein L7/12, C-terminal fragment
4.41.1 Ribosomal protein L11, N-terminal domain
4.42.2 Anti-lipopolysaccharide factor
4.42.1 RecA protein, C-terminal domain
4.43.1 Signal recognition particle alu RNA binding heterodimer, SRP9/14
4.44.1 dsRNA-binding domain-like
4.44.2 Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain
4.45.1 KH-domain
4.46.2 GMP synthetase, C-terminal, dimerisation domain
4.46.3 GTPase Era C-terminal domain
4.46.1 Alpha-lytic protease prodomain
4.47.1 Enolase N-terminal domain-like
4.48.1 Ribosomal protein L22
4.49.1 GroEL-like chaperone, intermediate domain
4.5.1 RNase A-like
4.50.1 DNA damage-inducible protein DinI
4.51.24 Adenylyl and guanylyl cyclase catalytic domain
4.51.29 Formiminotransferase domain of formiminotransferase-cyclodeaminase.
4.51.26 Methyl-coenzyme M reductase subunits
4.51.25 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase, HPPK
4.51.28 Formylmethanofuran:tetrahydromethanopterin formyltransferase
4.51.23 Translational regulator protein regA
4.51.22 Killer toxin KP6 alpha-subunit
4.51.27 FAD-linked oxidases, C-terminal domain
4.51.18 Carboxypeptidase G2, dimerisation domain
4.51.19 NAD-binding domain of HMG-CoA reductase
4.51.11 Elongation factor G (EF-G), domain V
4.51.31 Sulfite reductase, domains 1 and 3
4.51.30 Pseudouridine synthase I
4.51.17 Regulatory domain in the aminoacid metabolism
4.51.12 Guanine nucleotide exchange factor domain from elongation factor-1 beta
4.51.13 Anticodon-binding domain of PheRS
4.51.14 Ribosomal protein S6
4.51.15 Ribosomal protein L30
4.51.16 Metal-binding domain
4.51.20 Probable ACP-binding domain of malonyl-CoA ACP transacylase
4.51.10 Acylphosphatase
4.51.6 Nucleoside diphosphate kinases
4.51.7 RNA-binding domain
4.51.8 Viral DNA-binding domain
4.51.9 RuBisCO, large subunit, small (N-terminal) domain
4.51.5 Prokaryotic signal transducing protein
4.51.1 4Fe-4S ferredoxins
4.51.3 Protease propeptides
4.51.2 Aspartate carbamoyltransferase, Regulatory-chain, N-terminal domain
4.51.21 CheY-binding domain of CheA
4.51.4 Muconalactone isomerase
4.52.1 Probable bacterial effector-binding domain
4.53.1 mRNA triphosphatase CET1
4.54.1 eIF1-like
4.55.1 Hedgehog/DD-peptidase
4.56.1 Alpha-L RNA-binding motif
4.57.2 Arginyl-tRNA synthetase (ArgRS), N-terminal 'additional' domain
4.57.3 Ribosome recycling factor, RRF
4.57.1 Threonyl-tRNA synthetase (ThrRS), second 'additional' domain
4.58.1 Translation initiation factor IF3
4.58.2 EPT/RTPC-like
4.59.1 C-terminal domain of TolA
4.6.1 Prion protein domain
4.60.1 Yest killer toxins
4.61.1 Cyanase C-terminal domain
4.62.1 RuBisCO, small subunit
4.63.4 Rrokaryotic AspRS, insert domain
4.63.1 Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH)
4.63.3 Dimerization subdomain of RNA polymerase alpha subunit N-terminal domain
4.63.2 C-terminal domain of arginine repressor
4.64.1 tRNA splicing endonuclease, N-terminal domain
4.65.1 GYF domain
4.66.1 RPB5-like RNA polymerase subunit
4.67.1 HRPABC14.4, essential subunit of RNA polymerases I, II and III (RPB6)
4.68.4 Aminoimidazole ribonucleotide synthetase (PurM) N-terminal domain
4.68.1 YjgF-like
4.68.3 eL30-like
4.68.2 Tubulin, C-terminal domain
4.69.1 Tautomerase/MIF
4.7.1 LysM domain
4.70.1 Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain
4.71.2 C-terminal domain of frataxin
4.71.1 Copper amine oxidase, domain N
4.72.1 Bactericidal permeability-increasing protein, BPI
4.73.1 Subtilisin inhibitor
4.74.1 RNA bacteriophage capsid protein
4.75.1 Translation initiation factor eIF4e
4.76.1 FAD/NAD-linked reductases, dimerisation (C-terminal) domain
4.76.2 Carbon monoxide (CO) dehydrogenase flavoprotein C-domain
4.77.1 SRF-like
4.78.1 The origin DNA-binding domain of SV40 T-antigen
4.79.1 NADH oxidase/flavin reductase
4.80.1 N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1
4.8.1 Urease, gamma-subunit
4.81.1 Metalloproteases ("zincins"), catalytic domain
4.81.2 Bacterial chitobiase, Domain 2
4.82.1 SH2 domain
4.83.1 Histidine-containing phosphocarrier proteins (HPr)
4.84.2 Homing endonucleases
4.84.1 Glucose permease domain IIB
4.85.1 Tetrahydrobiopterin biosynthesis enzymes-like
4.86.1 Cell cycle regulatory proteins
4.87.1 beta-lactamase-inhibitor protein, BLIP
4.88.1 Ribosomal protein L9 C-domain
4.89.1 L9 N-domain-like
4.9.2 Chromo domain-like
4.9.1 Interleukin 8-like chemokines
4.90.1 Regulatory factor Nef
4.91.1 Mosquitocidal delta-endotoxin CytB
4.92.1 Class II aaRS and biotin synthetases
4.93.1 Clathrin adaptor appendage domain
4.94.1 Ran-binding protein mog1p
4.95.1 Acyl-CoA N-acyltransferases (Nat)
4.96.1 Actin depolymerizing proteins
4.97.1 Profilin (actin-binding protein)
4.97.2 PYP-like sensor domain
4.98.1 Pathogenesis-related PR-1 proteins
4.99.1 IIA domain of mannitol-specific and ntr phosphotransherase EII
5.1.1 Serpins
5.10.1 Prokaryotic type I DNA topoisomerase
5.11.1 Type II DNA topoisomerase
5.12.1 DNA topoisomerase IV, alpha subunit
5.13.1 DnaG catalytic core
5.14.1 Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragment
5.15.1 Branched-chain and D-amino acid aminotransferases
5.16.1 Nickel-iron hydrogenase, large subunit
5.17.1 Nickel-iron hydrogenase, small subunit
5.18.1 Heat shock protein 70kD (HSP70), C-terminal, substrate-binding fragment
5.19.1 L-2-Haloacid dehalogenase
5.20.1 Dehydroquinate synthase, DHQS
5.2.1 Replication terminator protein (Tus)
5.21.1 Firefly luciferase-like
5.22.1 Ribosomal protein L1
5.23.1 Neuronal Sec1, NSec1
5.24.1 Hybrid cluster protein (prismane protein)
5.25.1 BTV inner layer core protein vp3
5.3.1 beta-Lactamase/D-ala carboxypeptidase
5.4.1 ADP ribosyl cyclase
5.5.1 Heme-linked catalases
5.6.1 Acyl-CoA dehydrogenase (flavoprotein), N-terminal and middle domains
5.7.1 Sugar phosphatases
5.8.1 DNA/RNA polymerases
5.9.1 Nucleotidyltransferases
6.1.1 Colicin
6.1.2 Diphtheria toxin, middle domain
6.1.3 delta-Endotoxin (insectocide), N-terminal domain
6.1.5 Exotoxin A, middle domain
6.1.4 Bcl-2 inhibitors of programmed cell death
6.10.1 Envelope glycoprotein, central and dimerisation domains
6.11.1 Anthrax protective antigen
6.2.1 Membrane all-alpha
6.3.1 Light-harvesting complex subunits
6.4.3 Porins
6.4.2 Outer membrane phospholipase A (OMPLA)
6.4.1 Outer membrane protein
6.5.1 Integral outer membrane protein TolC, efflux pump component
6.6.1 Leukocidin (pore-forming toxin)
6.7.1 Lipovitellin-phosvitin complex
6.8.1 (Pro)aerolysin, pore-forming lobe
6.9.1 Perfringolysin
7.10.1 Hairpin loop containing domain of hepatocyte growth factor
7.1.1 Insulin-like
7.11.1 Neurotoxin III (ATX III)
7.12.1 Ligand-binding domain of low-density lipoprotein receptor
7.13.1 Crambin-like
7.14.1 Kringle-like
7.15.1 Ovomucoid/PCI-1 like inhibitors
7.16.1 Trefoil
7.17.1 Cystine-knot cytokines
7.18.1 Complement control module/SCR domain
7.19.1 Sea anemone toxin k
7.2.2 Neurotoxin B-IV
7.2.1 Heat-stable enterotoxin B
7.20.1 Blood coagulation inhibitor (disintegrin)
7.21.1 Methylamine dehydrogenase, L chain
7.22.1 Serine proterase inhibitors
7.23.1 TB module/8-cys domain
7.24.1 TNF receptor-like
7.25.1 Heparin-binding domain from vascular endothelial growth factor
7.26.1 Antifungal protein (AGAFP)
7.27.1 Fibronectin type I module
7.28.1 Thyroglobulin type-1 domain
7.29.1 Type X cellulose binding domain, CBDX
7.3.10 EGF/Laminin
7.30.1 Agouti related protein (MARP)
7.3.8 IGF binding domain
7.3.7 Cellulose-binding domain
7.3.5 omega toxin-like
7.3.3 Cyclotides
7.3.1 Plant lectins/antimicrobial peptides
7.3.4 Gurmarin, a sweet taste-suppressing polypeptide
7.3.6 Scorpion toxin-like
7.3.13 Elafin-like
7.3.14 Leech antihemostatic proteins
7.3.12 Bowman-Birk inhibitor, BBI
7.3.15 N-terminal domain of granulin-1
7.3.11 Bromelain inhibitor VI (cysteine protease inhibitor)
7.3.2 Plant inhibitors of proteinases and amylases
7.3.9 Colipase-like
7.31.1 GLA-domain
7.32.1 Cholecystokinin A receptor, N-domain
7.33.1 HIV-1 VPU cytoplasmic domain
7.34.1 Ribosomal protein S18
7.35.1 HIPIP (high potential iron protein)
7.36.1 Ferredoxin thioredoxin reductase (FTR), catalytic beta chain
7.37.1 Classic zinc finger, C2H2
7.38.1 Zn2/Cys6 DNA-binding domain
7.39.1 Glucocorticoid receptor-like (DNA-binding domain)
7.4.1 Proteinase inhibitor PMP-C
7.40.1 Retrovirus zinc finger-like domains
7.41.2 Microbial and mitochondrial ADK, insert "zinc finger" domain
7.41.1 Methionyl-tRNA synthetase (MetRS), Zn-domain
7.41.4 Casein kinase II beta subunit
7.41.6 Aspartate carbamoyltransferase, Regulatory-chain, C-terminal domain
7.41.3 Zinc beta-ribbon
7.41.5 Rubredoxin-like
7.42.1 Ribosomal protein L36
7.43.1 B-box zinc-binding domain
7.44.1 RING finger domain, C3HC4
7.45.1 Pyk2-associated protein beta ARF-GAP domain
7.46.1 Metallothionein
7.47.1 Zinc domain conserved in yeast copper-regulated transcription factors
7.48.1 Ada DNA repair protein, N-terminal domain (N-Ada 10)
7.49.1 Protein kinase cystein-rich domain (cys2, phorbol-binding domain)
7.50.1 Phosphatidylinositol-3-phosphate binding domain
7.5.1 Midkine
7.51.1 Zn-binding domains of ADDBP
7.52.1 Inhibitor of apoptosis (IAP) repeat
7.6.1 <i>Amb</i> V allergen
7.7.1 Snake toxin-like
7.8.1 BPTI-like
7.9.1 Defensin-like
8.1.15 Fibritin
8.1.14 Outer membrane lipoprotein
8.1.8 Fibrinogen coiled-coil region
8.1.9 Coiled-coil domain of nucleotide exchange factor GrpE
8.1.12 Oligomerization domain of hepatitis delta antigen
8.1.7 Assembly domain of cartilage oligomeric matrix protein
8.1.5 Tropomyosin
8.1.10 Coiled-coil dimerization domain from cortexillin I
8.1.1 Triple coiled coil domain of C-type lectins
8.1.4 Inovirus (filamentous phage) major coat protein
8.1.6 Chicken cartilage matrix protein
8.1.3 Leucine zipper domain
8.1.13 Neuronal synaptic fusion complex
8.1.11 Delta-sleep-iducing peptide immunoreactive peptide
8.1.2 Trimerization domain of TRAF2
8.2.1 Tetramerization domain of the Mnt repressor
8.3.2 Virus ectodomain
8.3.3 MMLV envelope protein, transmembrane subunit fragment
8.3.1 Influenza hemagglutinin (stalk)
8.4.1 Variant surface glycoprotein (N-terminal domain)
8.4.4 Hemolysin E (HlyE, ClyA, SheA)
8.4.3 Colicin Ia, N-terminal domain
8.4.2 Clostridium neurotoxins, "coiled-coil" domain
8.5.1 Apolipoprotein A-i
9.1.1 Ribosome and ribosomal fragments
9.10.1 Proteins of incorrect, partial and unknown sequence
9.2.1 Helicase
9.3.1 ATP synthase
9.4.1 Electron transport chains
9.5.1 Photosynthetic reaction center and core antenna system (trimeric)
9.6.1 Virus-receptor complexes
9.7.1 RNA polymerase
9.8.1 Blood clotting
9.9.1 Model structures from non-NOE based NMR structure calculation
10.10.1 VPR protein fragments
10.1.1 Membrane ion channel-forming peptide antibiotics containing D-aminoacids
10.11.1 Inactivation gate of potassium and sodium channels
10.12.1 Coagulation factor VIII, membrane-binding peptide
10.13.1 Phosphocholine cytidylyltransferase membrane-binding peptides
10.14.1 Parathyroid hormone fragments (residues between 1 and 39)
10.15.1 Corticotropin releasing factor
10.16.1 Liposaccharide-binding protein CAP18 (residues 106-137)
10.17.1 Polymorphic antigen SPAM-H1 (residues 90-127)
10.18.1 Mellitin
10.19.1 Tertiapin
10.2.1 Lantibiotic peptides
10.20.1 Antifreeze polypeptide HPLC-6
10.21.1 Troponin I fragments
10.22.1 Pilin fragments
10.23.1 RP71935
10.24.1 Atrial natriuretic peptide
10.25.1 Compstatin
10.26.1 Tritrpticin
10.27.1 Endothelin-like
10.28.1 Heat-stable enterotoxin (HSE)
10.29.1 Conotoxins
10.30.1 Conantokin
10.3.1 Antimicrobial beta-hairpin
10.31.1 Contryphan-R
10.32.1 Immunodominant region of protein G of BRSV
10.33.1 Bradykinin antagonist B-9340
10.34.1 Transmembrane helical fragments
10.35.2 Vacuolar targeting peptide from NA-PROPI (residues 29-54)
10.35.3 Microcin leader peptide
10.35.1 Ferredoxin chloroplastic transit peptide
10.36.1 Phospholamban, cytoplasmic domain residues 1-25
10.37.1 Fragment of bowman-birk inhibitor
10.38.1 Fragments of apolipoproteins
10.39.1 Transactivation protein TAT (TAT EIAVY)
10.40.1 Proline pipe
10.4.1 Antimicrobial helix
10.41.1 Amyloid peptides
10.42.1 Gelsolin fragment (residues 150-169)
10.43.1 Acetylcholine receptor fragment (residues alpha 67-76)
10.44.1 Thrombomodulin EGF domain fragment (residues 409-426)
10.45.1 MoMLV p15 fragment (residues 409-426)
10.46.1 MoMLV capsid protein major homology region peptide analog
10.47.1 CD4 receptor peptide, res. 403-419
10.48.1 Heparin binding site of non collagenous domain I (nc1) of collagen facit xiv
10.49.1 GroES, fragment of mobile loop
10.5.1 Alamecitin
10.50.1 N-terminal splice region of cAMP phosphodiesterase
10.51.1 HIV-1 Nef protein fragments
10.52.1 HIV-1 envelope gp120 protein concensus V3 loop peptide
10.53.1 Hepatitis C virus N-terminal capsid protein fragment 2-45
10.54.1 P27(KIP1) fragment 22-106
10.55.1 Transducin alpha-1 subunit rhodopsin binding domain (res. 340-350)
10.56.1 alpha-lactalbumin peptide model
10.57.1 Coat protein-binding domain of bacteriophage p22 scaffolding protein
10.58.1 Immunoreceptor tyrosine kinase activation motif, ITAM
10.59.1 Cytoplasmic domain of the integrin alpha-iib subunit
10.60.1 Dimerization domain (1-33) of hnf1-alpha
10.6.1 Peptide hormones
10.61.1 Human glutathione reductase (HGR) inhibitor
10.62.1 Small subunit C-terminal inhibitory peptide of ribonucleotide reductase
10.63.1 Histone H3 C-terminal fragment 130-135
10.64.1 Smad-binding domain of Sara
10.65.1 Peptide derived from p-21 activated kinase
10.7.1 delta-Toxin
10.8.1 PSP1-like
10.9.2 TAT pepdides
10.9.1 HIV-1 REV fragments
10.9.3 Box B RNA-binding N peptide
10.9.4 HTLV-1 peptide
11.1.1 Hybrid and chimeric proteins
11.10.1 Retro-GCN4 leucine zipper
11.11.1 Zinc finger design
11.12.1 Protein A Ig(Fc)-binding domain mimics
11.13.1 Zinc finger based beta-beta-alpha motif
11.14.1 Alpha-t-alpha, a <i>de novo</i> designed peptide
11.15.1 alpha2d
11.16.1 RH4 designed right-handed coiled coil tetramer
11.17.1 Erythropoietin (EPO) mimetic peptide 1
11.18.1 Octreotide (Sandostatine), a somatostatine analogue
11.19.1 Prototype WW domain
11.2.1 Amphiphilic (amphipathic) alpha helix
11.3.1 Collagen-like peptides
11.4.1 Alpha helical bundle
11.5.1 Alpha helical bundle
11.6.1 Thermostable heterotrimeric coiled coil
11.7.1 Designed four helix bundle protein
11.8.1 <i>De novo</i> designed single chain three-helix bundle (a3d)
11.9.1 Peptide f (amphiphilic octadecapeptide)