pre-SCOP - Class: Peptides [58231] (58231)

Membrane ion channel-forming peptide antibiotics containing D-aminoacids (58232)

Ribosomal protein S21p (998790)

non-globular, mainly alpha-helical

Lantibiotic peptides (58243)

peptide antibiotic

Leucocin-like bacteriocin (100898)

consists of a conserved, disulfide-containing N-terminal region (forming a beta-sheet) and a C-terminal helix

Antimicrobial beta-hairpin (58251)

contains beta-hairpin crosslinked by disulfide bridge(s)

Antimicrobial helix (58268)

antibiotic peptide

Macrocyclic bacteriocins (58278)

macrocyclic antimicrobial peptide; bacteriocin

Peptide hormones (58283)

contains one alpha-helix

Angiotensin (90269)

delta toxin-like (58307)

single alpha helix

PSP1-like (58312)

Arg-rich RNA binding peptides (58321)

DNA-binding domains of HMG-I(Y) (58348)

VPR protein fragments (58353)

Inactivation gate of potassium and sodium channels (58358)

Coagulation factor VIII, membrane-binding peptide (58368)

Phosphocholine cytidylyltransferase membrane-binding peptides (58373)

Parathyroid hormone fragments (residues between 1 and 39) (58378)

Corticotropin releasing hormone (58384)

Liposaccharide-binding protein CAP18 (residues 106-137) (58389)

Polymorphic antigen SPAM-H1 (residues 90-127) (58394)

Insect toxins (58399)

Tertiapin (58404)

small disulfide-rich peptide

Antifreeze polypeptide HPLC-6 (58409)

Troponin I fragments (58414)

Pilin fragments (58420)

RP71935 (58427)

Atrial natriuretic peptide (58432)

Compstatin (58437)

Membrane-bound antimicrobial peptides (58442)

Endothelin-like (58449)

small disulfide-rich

Heat-stable enterotoxin (HSE) (58457)

Conotoxins (58464)

disulfide-rich fold

Conantokin (58494)

Contryphan-R (58502)

Kappa-hefutoxin-like (58507)

hairpin of two short helices crosslinked with two disulfides

Penaeidin-3a (103726)

Bradykinin (58512)

Transmembrane helical fragments (58517)

Topogenic peptides (58555)

Phospholamban fragments (58568)

Influenza hemagglutinin fragments (64631)

Fragments of bowman-birk inhibitor (58574)

Fragments of apolipoproteins (58579)

Transactivation protein TAT (58593)

Proline pipe (58599)

Amyloid peptides (58604)

Gelsolin fragment (residues 150-169) (58609)

Acetylcholine receptor fragment (residues alpha 67-76) (58614)

Thrombomodulin EGF domain fragment (residues 409-426) (58619)

C-terminal fragment of thermolysin (63387)

Capsid protein major homology region peptide analog (58629)

CD4 and CD8 receptor regions (58635)

Proto-oncogene tyrosine-protein kinase lck CD4/CD8 interacting region (103748)

Heparin binding site of non collagenous domain I (nc1) of collagen facit xiv (58640)

GroES fragments (58645)

cAMP and cGMP phosphodiesterase (PDE) fragments (58650)

HIV-1 Nef protein fragments (58657)

HIV-1 envelope gp120 protein fragments (58662)

HIV-1 gp41 fragments (70010)

Hepatitis C virus N-terminal capsid protein fragment 2-45 (58667)

P27(KIP1) fragment 22-106 (58672)

Transducin alpha-1 subunit rhodopsin binding domain (res. 340-350) (58677)

Transducin gamma-t1 subunit rhodopsin bound fragment (res. 60-71) (90290)

alpha-lactalbumin peptide model (58682)

Coat protein-binding domain of bacteriophage P22 scaffolding protein (58687)

Immunoreceptor tyrosine kinase activation motif, ITAM (58692)

Integrin fragments (58697)

Human glutathione reductase (HGR) inhibitor (58702)

Small subunit C-terminal inhibitory peptide of ribonucleotide reductase (58707)

Histone H3 C-terminal fragment 130-135 (58712)

Smad-binding domain of Sara (58717)

Transactivation domain (81275)

Nuclear receptor coactivator Src-1 (100901)

TBP-binding domain of the transcription factor IIIb Brf1 subunit (90297)

BRCA2 BRC4 repeat (82985)

Peptide derived from p-21 activated kinase (58722)

pak1 autoregulatory domain (58728)

Translocated intimin receptor (tir) intimin-binding domain (58733)

Fragments of the L-type calcium channel alpha subunit Cav.1 (dihydropyridine receptor) (58738)

Tumor suppressor p53 fragments (58743)

FxFG nucleoporin repeats (58748)

beta-Catenine bound non-globular protein regions (58753)

Synaptobrevin-II fragments (58758)

VMIP-II fragment (58763)

Papillomavirus e6-interacting peptide of e6ap (58768)

Isolated insulin B-chain (58773)

N-terminal hairpin of ubiquitin (residues 1-17) (58778)

alpha-helical hairpin of p8mtcp1 (58783)

Syndecan-4 cytoplasmic domain (64638)

Actin-binding peptides (70017)

Pituitary adenylate cyclase activating polypeptide, pacap21 (64643)

Rack1 interaction site of the CAMP-specific phosphodiesterase pde4d5. (70022)

Prepeptide of 5-ALAS (70027)

Cholecystokinin receptor fragments (64648)

the cytoplasmic N-terminus of the bk beta-subunit kcnmb2 (70032)

Trypsin inhibitor SFTIf-1 (64653)

Prion protein fragments (70037)

Tumor suppressor protein p19-ARF fragment (70042)

Antennapedia homeodomain fragments (70047)

Sheep myeloid antimicrobial peptide SMAP29 based peptides (75751)

alpha-2a adrenergic receptor pepride t3-i2 (75756)

Catestatin fragment from chromogranin A (75761)

Bhpbr3, the Baff-binding loop of br3 embedded in a beta-hairpin peptide (82992)

N-terminal fragment of gastric H/K-ATPase (82997)

Barstar fragment (83002)

Cannabinoid receptor 1 (CB1) fragment (83007)

Ribosomal protein L10 (64658)

Ubiquitin interacting motif (UIM) (90302)

Metal-binding peptide from MerP (103758)

Marinostatin, MstI (103763)

Cross-reactive peptides from 60S acidic ribosomal protein p2 (103768)

NTR, cyclotide processing element (111516)

HMG-box transcription factor 1 fragments (111523)

MAD protein fragments (111528)

Fragments of TNF receptors (111533)

Ezrin-radixin-moesin binding phosphoprotein 50 (ebp50) fragments (111538)

Ribosomal protein L34p (144320)

non-globular, mainly alpha-helical

Retinoblastoma-associated protein RB1 fragments (144325)

Genome linked protein vpg (144330)

Programmed cell death protein 5 fragments (144335)

Lineage

Class

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